MC04g1892 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1892
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	AAI domain-containing protein
Location	MC04: 26001394 .. 26001717 (+)
RNA-Seq Expression	MC04g1892
Synteny	MC04g1892

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGCTTCCTATTATTTTTTGCTCTGCTTTTCATTAGTGCAAGATGTGGTTATGTTCGTCCTAATAGCGAGTGTGCCCCATCTTCACCTGAACGAGAGGCATACAAAATGCTTCCTTGTATGGCTGCTTCCAAAGATCCTTATTATCCAGTTTCCCAAAAATGTTGCGATCAAGTGAGGAAGCTAGGCCAGAGCACAAGCTGTCTTTGTGCAGTAATGTTGTCCAAAACAGCCCAAATGGTTGGGTCTAAGCCCGAAGTTGCCATTACAATTCCCAAACGTTGTGACATTGCTGAACGCCCTGTTGGCTATAACTGCGGGGGT

mRNA sequence

ATTTGCTTCCTATTATTTTTTGCTCTGCTTTTCATTAGTGCAAGATGTGGTTATGTTCGTCCTAATAGCGAGTGTGCCCCATCTTCACCTGAACGAGAGGCATACAAAATGCTTCCTTGTATGGCTGCTTCCAAAGATCCTTATTATCCAGTTTCCCAAAAATGTTGCGATCAAGTGAGGAAGCTAGGCCAGAGCACAAGCTGTCTTTGTGCAGTAATGTTGTCCAAAACAGCCCAAATGGTTGGGTCTAAGCCCGAAGTTGCCATTACAATTCCCAAACGTTGTGACATTGCTGAACGCCCTGTTGGCTATAACTGCGGGGGT

Coding sequence (CDS)

ATTTGCTTCCTATTATTTTTTGCTCTGCTTTTCATTAGTGCAAGATGTGGTTATGTTCGTCCTAATAGCGAGTGTGCCCCATCTTCACCTGAACGAGAGGCATACAAAATGCTTCCTTGTATGGCTGCTTCCAAAGATCCTTATTATCCAGTTTCCCAAAAATGTTGCGATCAAGTGAGGAAGCTAGGCCAGAGCACAAGCTGTCTTTGTGCAGTAATGTTGTCCAAAACAGCCCAAATGGTTGGGTCTAAGCCCGAAGTTGCCATTACAATTCCCAAACGTTGTGACATTGCTGAACGCCCTGTTGGCTATAACTGCGGGGGT

Protein sequence

ICFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKLGQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG

Homology

[Close]

BLAST of MC04g1892 vs. NCBI nr
Match: XP_022134464.1 (uncharacterized protein LOC111006702 [Momordica charantia])

HSP 1 Score: 225 bits (573), Expect = 4.47e-74
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   ICFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVR 60
           ICFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVR
Sbjct: 8   ICFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVR 67

Query: 61  KLGQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 108
           KLGQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG
Sbjct: 68  KLGQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 115

[Close]

BLAST of MC04g1892 vs. NCBI nr
Match: XP_023515889.1 (uncharacterized protein LOC111779894 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178 bits (451), Expect = 1.86e-55
Identity = 83/106 (78.30%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 4   LLFFALLFISARCGYV-RPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKL 63
           LLF AL  ++ARC Y  +   ECAPS+PEREA+KM+PC+AASKDPYYPVS +CCDQVRKL
Sbjct: 11  LLFLALFLVTARCDYYGQQRGECAPSNPEREAFKMMPCLAASKDPYYPVSHRCCDQVRKL 70

Query: 64  GQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 108
           GQSTSCLCAVMLS TA MVG+KPE+AITIPKRC+IAERPVGYNCGG
Sbjct: 71  GQSTSCLCAVMLSNTAAMVGAKPEIAITIPKRCNIAERPVGYNCGG 116

[Close]

BLAST of MC04g1892 vs. NCBI nr
Match: XP_022962642.1 (uncharacterized protein LOC111463057 [Cucurbita moschata] >KAG6602641.1 hypothetical protein SDJN03_07874, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 173 bits (438), Expect = 1.79e-53
Identity = 81/106 (76.42%), Postives = 93/106 (87.74%), Query Frame = 0


Query: 4   LLFFALLFISARCGYV-RPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKL 63
           LLF AL  ++AR  Y  +   ECAPS+PEREA+KM+PC++ASKDPYYPVS +CCDQVRKL
Sbjct: 11  LLFLALFLVTARSDYYGQQRGECAPSNPEREAFKMMPCLSASKDPYYPVSHRCCDQVRKL 70

Query: 64  GQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 108
           GQSTSCLCAVMLS TA MVG+KPE+AITIPKRC+IAERPVGYNCGG
Sbjct: 71  GQSTSCLCAVMLSNTAAMVGAKPEIAITIPKRCNIAERPVGYNCGG 116

[Close]

BLAST of MC04g1892 vs. NCBI nr
Match: XP_038886380.1 (uncharacterized protein LOC120076581 [Benincasa hispida])

HSP 1 Score: 172 bits (437), Expect = 2.54e-53
Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 5   LFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKLGQ 64
           LF A+  +  + G+V+   ECAPS+PEREA+KM+PCM ASKD  YPVSQ+CCDQVRKLGQ
Sbjct: 13  LFIAMFIVGTKSGHVQSRGECAPSNPEREAFKMMPCMGASKDENYPVSQRCCDQVRKLGQ 72

Query: 65  STSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 108
           STSCLCAVMLSKTA++VGSKPE+AITIPKRC+I ERPVGYNCGG
Sbjct: 73  STSCLCAVMLSKTAELVGSKPEIAITIPKRCNILERPVGYNCGG 116

[Close]

BLAST of MC04g1892 vs. NCBI nr
Match: KAA0041465.1 (LTP_2 domain-containing protein [Cucumis melo var. makuwa] >TYK24340.1 LTP_2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 169 bits (429), Expect = 4.77e-52
Identity = 74/100 (74.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 9   LLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKLGQSTSC 68
           +L +   CG+V+   ECAPS+P+REA+KM+PCM ASKD  YPVSQ+CCDQV+KLGQSTSC
Sbjct: 22  MLMVGTECGHVQSKGECAPSTPDREAFKMMPCMGASKDADYPVSQRCCDQVKKLGQSTSC 81

Query: 69  LCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 108
           LCAVMLSKTA++VGSKPE+AITIPKRC+I +RPVGYNCGG
Sbjct: 82  LCAVMLSKTAELVGSKPEIAITIPKRCNIVDRPVGYNCGG 121

[Close]

BLAST of MC04g1892 vs. ExPASy TrEMBL
Match: A0A6J1BYT2 (uncharacterized protein LOC111006702 OS=Momordica charantia OX=3673 GN=LOC111006702 PE=4 SV=1)

HSP 1 Score: 225 bits (573), Expect = 2.16e-74
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   ICFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVR 60
           ICFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVR
Sbjct: 8   ICFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVR 67

Query: 61  KLGQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 108
           KLGQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG
Sbjct: 68  KLGQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 115

[Close]

BLAST of MC04g1892 vs. ExPASy TrEMBL
Match: A0A6J1HD74 (uncharacterized protein LOC111463057 OS=Cucurbita moschata OX=3662 GN=LOC111463057 PE=4 SV=1)

HSP 1 Score: 173 bits (438), Expect = 8.65e-54
Identity = 81/106 (76.42%), Postives = 93/106 (87.74%), Query Frame = 0


Query: 4   LLFFALLFISARCGYV-RPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKL 63
           LLF AL  ++AR  Y  +   ECAPS+PEREA+KM+PC++ASKDPYYPVS +CCDQVRKL
Sbjct: 11  LLFLALFLVTARSDYYGQQRGECAPSNPEREAFKMMPCLSASKDPYYPVSHRCCDQVRKL 70

Query: 64  GQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 108
           GQSTSCLCAVMLS TA MVG+KPE+AITIPKRC+IAERPVGYNCGG
Sbjct: 71  GQSTSCLCAVMLSNTAAMVGAKPEIAITIPKRCNIAERPVGYNCGG 116

[Close]

BLAST of MC04g1892 vs. ExPASy TrEMBL
Match: A0A5A7TJ62 (LTP_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001170 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 2.31e-52
Identity = 74/100 (74.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 9   LLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKLGQSTSC 68
           +L +   CG+V+   ECAPS+P+REA+KM+PCM ASKD  YPVSQ+CCDQV+KLGQSTSC
Sbjct: 22  MLMVGTECGHVQSKGECAPSTPDREAFKMMPCMGASKDADYPVSQRCCDQVKKLGQSTSC 81

Query: 69  LCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 108
           LCAVMLSKTA++VGSKPE+AITIPKRC+I +RPVGYNCGG
Sbjct: 82  LCAVMLSKTAELVGSKPEIAITIPKRCNIVDRPVGYNCGG 121

[Close]

BLAST of MC04g1892 vs. ExPASy TrEMBL
Match: A0A1S3B414 (uncharacterized protein LOC103485536 OS=Cucumis melo OX=3656 GN=LOC103485536 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 2.38e-52
Identity = 74/100 (74.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 9   LLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKLGQSTSC 68
           +L +   CG+V+   ECAPS+P+REA+KM+PCM ASKD  YPVSQ+CCDQV+KLGQSTSC
Sbjct: 22  MLMVGTECGHVQSKGECAPSTPDREAFKMMPCMGASKDADYPVSQRCCDQVKKLGQSTSC 81

Query: 69  LCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 108
           LCAVMLSKTA++VGSKPE+AITIPKRC+I +RPVGYNCGG
Sbjct: 82  LCAVMLSKTAELVGSKPEIAITIPKRCNIVDRPVGYNCGG 121

[Close]

BLAST of MC04g1892 vs. ExPASy TrEMBL
Match: A0A6J1JQF7 (uncharacterized protein LOC111487407 OS=Cucurbita maxima OX=3661 GN=LOC111487407 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 1.37e-50
Identity = 78/106 (73.58%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 4   LLFFALLFISARCGYV-RPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKL 63
           LLF  L  ++AR  Y  +   ECAPS+PEREA+KM+PC++ASKDPY PVS +CCDQVRKL
Sbjct: 11  LLFLVLFLVTARSDYYGQQRGECAPSNPEREAFKMMPCLSASKDPYSPVSHRCCDQVRKL 70

Query: 64  GQSTSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCGG 108
           GQSTSCLCAVMLS TA MVG+KPE+AITIPKRC+IAERPVGYNC G
Sbjct: 71  GQSTSCLCAVMLSNTAAMVGAKPEIAITIPKRCNIAERPVGYNCEG 116

[Close]

BLAST of MC04g1892 vs. TAIR 10
Match: AT5G05960.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 7.0e-24
Identity = 51/103 (49.51%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 5   LFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKLGQ 64
           +F  +L I +    V    EC  + P+REA K+ PC  A++D    VS  CC +V+++GQ
Sbjct: 9   IFLLVLCIYSLKTMVYGAGECGRNPPDREAIKLAPCAMAAQDTSAKVSAICCARVKQMGQ 68

Query: 65  STSCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCG 108
           +  CLCAVMLS TA+  G+KPE+++TIPKRC+IA RPVGY CG
Sbjct: 69  NPKCLCAVMLSSTARSSGAKPEISMTIPKRCNIANRPVGYKCG 111

[Close]

BLAST of MC04g1892 vs. TAIR 10
Match: AT3G53980.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 24  ECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKLGQSTSCLCAVMLSKTAQMVGS 83
           EC  SSP+ EA K+ PC  A++D    V   CC Q+++  Q+  CLCA++LS TA+  G 
Sbjct: 26  ECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQIKRFSQNPKCLCAILLSDTAKASGV 85

Query: 84  KPEVAITIPKRCDIAERPVGYNCG 108
            PEVA+TIPKRC+ A RPVGY CG
Sbjct: 86  DPEVALTIPKRCNFANRPVGYKCG 109

[Close]

BLAST of MC04g1892 vs. TAIR 10
Match: AT3G53980.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 24  ECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRKLGQSTSCLCAVMLSKTAQMVGS 83
           EC  SSP+ EA K+ PC  A++D    V   CC Q+++  Q+  CLCA++LS TA+  G 
Sbjct: 26  ECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQIKRFSQNPKCLCAILLSDTAKASGV 85

Query: 84  KPEVAITIPKRCDIAERPVGYNCG 108
            PEVA+TIPKRC+ A RPVGY CG
Sbjct: 86  DPEVALTIPKRCNFANRPVGYKCG 109

[Close]

BLAST of MC04g1892 vs. TAIR 10
Match: AT2G37870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 5.6e-13
Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 0


Query: 2   CFLLFFALLFISARCGYVRPNSECAPSSPEREAYKMLPCMAASKDPYYPVSQKCCDQVRK 61
           C  +  AL+ +      V    EC      + A  + PC+ A+K+P   V   CC +V  
Sbjct: 4   CKFVAVALMSLLISLASVEAAGECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAKVGA 63

Query: 62  LGQST-SCLCAVMLSKTAQMVGSKPEVAITIPKRCDIAERPVGYNCG 108
           L ++   CLCAVMLS  A+  G  P +AI +PKRC+I  RP G  CG
Sbjct: 64  LIRTNPRCLCAVMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCG 110

The following BLAST results are available for this feature:

BLAST of MC04g1892 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g1892 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134464.1	4.47e-74	100.00	uncharacterized protein LOC111006702 [Momordica charantia]	[more]
XP_023515889.1	1.86e-55	78.30	uncharacterized protein LOC111779894 [Cucurbita pepo subsp. pepo]	[more]
XP_022962642.1	1.79e-53	76.42	uncharacterized protein LOC111463057 [Cucurbita moschata] >KAG6602641.1 hypothet...	[more]
XP_038886380.1	2.54e-53	75.00	uncharacterized protein LOC120076581 [Benincasa hispida]	[more]
KAA0041465.1	4.77e-52	74.00	LTP_2 domain-containing protein [Cucumis melo var. makuwa] >TYK24340.1 LTP_2 dom...	[more]

BLAST of MC04g1892 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYT2	2.16e-74	100.00	uncharacterized protein LOC111006702 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1HD74	8.65e-54	76.42	uncharacterized protein LOC111463057 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A5A7TJ62	2.31e-52	74.00	LTP_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B414	2.38e-52	74.00	uncharacterized protein LOC103485536 OS=Cucumis melo OX=3656 GN=LOC103485536 PE=...	[more]
A0A6J1JQF7	1.37e-50	73.58	uncharacterized protein LOC111487407 OS=Cucurbita maxima OX=3661 GN=LOC111487407...	[more]

BLAST of MC04g1892 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05960.1	7.0e-24	49.51	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G53980.1	1.1e-21	52.38	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G53980.2	1.1e-21	52.38	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G37870.1	5.6e-13	37.38	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 31..102 e-value: 7.7E-11 score: 43.7
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 34..101
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 22..105 e-value: 2.6E-10 score: 40.3
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 1..107
None	No IPR available	PANTHER	PTHR33122:SF66	LIPID TRANSFER PROTEIN	coord: 1..107
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 37..97 e-value: 2.22445E-5 score: 37.4063

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1892.1	MC04g1892.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
molecular_function	GO:0005504	fatty acid binding