MC01g0144.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAAGCTTCAGTCTCCACGGCCTTCTTCGTCGCCGCCTTCATCCTCGCCGTCTGCTCCGCCGCACTCGCAGTCGCCGATGACTTCGCTCCGGCGCCTGCTCCAGCGCGTGAGGCCGGATCCGGCTTCTCTCTCCCCATCTCCGGTGCTGTCGTTGGCTCTGCCCTCATCCTCTCTCTTCTTCACCTTCTCAGGCAT ATGGCGAAAGCTTCAGTCTCCACGGCCTTCTTCGTCGCCGCCTTCATCCTCGCCGTCTGCTCCGCCGCACTCGCAGTCGCCGATGACTTCGCTCCGGCGCCTGCTCCAGCGCGTGAGGCCGGATCCGGCTTCTCTCTCCCCATCTCCGGTGCTGTCGTTGGCTCTGCCCTCATCCTCTCTCTTCTTCACCTTCTCAGGCAT ATGGCGAAAGCTTCAGTCTCCACGGCCTTCTTCGTCGCCGCCTTCATCCTCGCCGTCTGCTCCGCCGCACTCGCAGTCGCCGATGACTTCGCTCCGGCGCCTGCTCCAGCGCGTGAGGCCGGATCCGGCTTCTCTCTCCCCATCTCCGGTGCTGTCGTTGGCTCTGCCCTCATCCTCTCTCTTCTTCACCTTCTCAGGCAT MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH Homology
BLAST of MC01g0144.1 vs. NCBI nr
Match: PON91673.1 (hypothetical protein TorRG33x02_125040 [Trema orientale]) HSP 1 Score: 63.5 bits (153), Expect = 1.93e-11 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of MC01g0144.1 vs. NCBI nr
Match: PON58105.1 (hypothetical protein PanWU01x14_168750 [Parasponia andersonii]) HSP 1 Score: 61.6 bits (148), Expect = 1.11e-10 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of MC01g0144.1 vs. NCBI nr
Match: PNT29920.1 (hypothetical protein POPTR_006G056000 [Populus trichocarpa]) HSP 1 Score: 57.4 bits (137), Expect = 5.51e-09 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of MC01g0144.1 vs. NCBI nr
Match: KAG6769237.1 (hypothetical protein POTOM_024855 [Populus tomentosa]) HSP 1 Score: 57.4 bits (137), Expect = 5.51e-09 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of MC01g0144.1 vs. NCBI nr
Match: ABK92800.1 (unknown [Populus trichocarpa]) HSP 1 Score: 56.6 bits (135), Expect = 1.11e-08 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of MC01g0144.1 vs. ExPASy TrEMBL
Match: A0A2P5F1K4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_125040 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 9.33e-12 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of MC01g0144.1 vs. ExPASy TrEMBL
Match: A0A2P5CAT1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_168750 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 5.39e-11 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of MC01g0144.1 vs. ExPASy TrEMBL
Match: F6HL53 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g08000 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.61e-09 Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 0
BLAST of MC01g0144.1 vs. ExPASy TrEMBL
Match: U7DW91 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G056000 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.67e-09 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of MC01g0144.1 vs. ExPASy TrEMBL
Match: A9P8U7 (Uncharacterized protein OS=Populus trichocarpa OX=3694 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.38e-09 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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