MC01g0144 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g0144
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC01: 7106764 .. 7106964 (-)
RNA-Seq ExpressionMC01g0144
SyntenyMC01g0144
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAAGCTTCAGTCTCCACGGCCTTCTTCGTCGCCGCCTTCATCCTCGCCGTCTGCTCCGCCGCACTCGCAGTCGCCGATGACTTCGCTCCGGCGCCTGCTCCAGCGCGTGAGGCCGGATCCGGCTTCTCTCTCCCCATCTCCGGTGCTGTCGTTGGCTCTGCCCTCATCCTCTCTCTTCTTCACCTTCTCAGGCAT

mRNA sequence

ATGGCGAAAGCTTCAGTCTCCACGGCCTTCTTCGTCGCCGCCTTCATCCTCGCCGTCTGCTCCGCCGCACTCGCAGTCGCCGATGACTTCGCTCCGGCGCCTGCTCCAGCGCGTGAGGCCGGATCCGGCTTCTCTCTCCCCATCTCCGGTGCTGTCGTTGGCTCTGCCCTCATCCTCTCTCTTCTTCACCTTCTCAGGCAT

Coding sequence (CDS)

ATGGCGAAAGCTTCAGTCTCCACGGCCTTCTTCGTCGCCGCCTTCATCCTCGCCGTCTGCTCCGCCGCACTCGCAGTCGCCGATGACTTCGCTCCGGCGCCTGCTCCAGCGCGTGAGGCCGGATCCGGCTTCTCTCTCCCCATCTCCGGTGCTGTCGTTGGCTCTGCCCTCATCCTCTCTCTTCTTCACCTTCTCAGGCAT

Protein sequence

MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH
Homology
BLAST of MC01g0144 vs. NCBI nr
Match: PON91673.1 (hypothetical protein TorRG33x02_125040 [Trema orientale])

HSP 1 Score: 63.5 bits (153), Expect = 1.93e-11
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0

Query: 1  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILS 60
          MA+ S ST  F    +L V +A LA A D APAPAP   AGSG+SLP+SGAVVG++L+LS
Sbjct: 1  MAQVSTSTKAFSFLIVLFVAAATLASAQDLAPAPAP-LSAGSGYSLPVSGAVVGASLVLS 60

Query: 61 LLHLLRH 67
          +  LL+H
Sbjct: 61 VFALLKH 66

BLAST of MC01g0144 vs. NCBI nr
Match: PON58105.1 (hypothetical protein PanWU01x14_168750 [Parasponia andersonii])

HSP 1 Score: 61.6 bits (148), Expect = 1.11e-10
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0

Query: 1  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILS 60
          MA+ S ST  F    +L V +A LA A D APAPAP   AGSG+SLP+SG VVG++L+LS
Sbjct: 1  MAQVSTSTKAFSFLIVLFVVAATLASAQDLAPAPAP-LSAGSGYSLPVSGVVVGASLVLS 60

Query: 61 LLHLLRH 67
          +  LL+H
Sbjct: 61 VFALLKH 66

BLAST of MC01g0144 vs. NCBI nr
Match: PNT29920.1 (hypothetical protein POPTR_006G056000 [Populus trichocarpa])

HSP 1 Score: 57.4 bits (137), Expect = 5.51e-09
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0

Query: 14 AFILAVCSAALAV-----ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH 67
          AF+L +  AA AV     ++  APAPAP  EAG+GFSLP+SGA+VG +L++SLL  L+H
Sbjct: 10 AFLLFLVIAAFAVVSAQDSESMAPAPAPGMEAGAGFSLPVSGAIVGFSLVVSLLGFLKH 68

BLAST of MC01g0144 vs. NCBI nr
Match: KAG6769237.1 (hypothetical protein POTOM_024855 [Populus tomentosa])

HSP 1 Score: 57.4 bits (137), Expect = 5.51e-09
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0

Query: 14 AFILAVCSAALAV-----ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH 67
          AF+L +  AA AV     ++  APAPAP  EAG+GFSLP+SGA+VG +L++SLL  L+H
Sbjct: 10 AFLLFLMIAAFAVVSGQDSESMAPAPAPGMEAGAGFSLPVSGAIVGFSLVVSLLGFLKH 68

BLAST of MC01g0144 vs. NCBI nr
Match: ABK92800.1 (unknown [Populus trichocarpa])

HSP 1 Score: 56.6 bits (135), Expect = 1.11e-08
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0

Query: 14 AFILAVCSAALAV-----ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH 67
          AF+L +  AA AV     ++  APAPAP  EAG+GFSLP+SGA+VG +L++SLL  L+H
Sbjct: 10 AFLLFLLIAAFAVVSAQDSESMAPAPAPGMEAGAGFSLPVSGAMVGFSLVVSLLGFLKH 68

BLAST of MC01g0144 vs. ExPASy TrEMBL
Match: A0A2P5F1K4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_125040 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.33e-12
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0

Query: 1  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILS 60
          MA+ S ST  F    +L V +A LA A D APAPAP   AGSG+SLP+SGAVVG++L+LS
Sbjct: 1  MAQVSTSTKAFSFLIVLFVAAATLASAQDLAPAPAP-LSAGSGYSLPVSGAVVGASLVLS 60

Query: 61 LLHLLRH 67
          +  LL+H
Sbjct: 61 VFALLKH 66

BLAST of MC01g0144 vs. ExPASy TrEMBL
Match: A0A2P5CAT1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_168750 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.39e-11
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0

Query: 1  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILS 60
          MA+ S ST  F    +L V +A LA A D APAPAP   AGSG+SLP+SG VVG++L+LS
Sbjct: 1  MAQVSTSTKAFSFLIVLFVVAATLASAQDLAPAPAP-LSAGSGYSLPVSGVVVGASLVLS 60

Query: 61 LLHLLRH 67
          +  LL+H
Sbjct: 61 VFALLKH 66

BLAST of MC01g0144 vs. ExPASy TrEMBL
Match: F6HL53 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g08000 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.61e-09
Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 0

Query: 1  MAKASVSTAFFVAAFILAVCSAALAV-ADDFAPAPAPAREAGSGFSLPISGAVVGSALIL 60
          MA+ S++ AF +  F++A+ SAA  V A D +PAPAP+ +AGS FSLP+SGAVV S+L+ 
Sbjct: 1  MAQVSIAKAFMLV-FVVAIFSAAATVSALDNSPAPAPSPDAGSAFSLPLSGAVVASSLVF 60

Query: 61 SLLHLLRH 67
          SLL  L++
Sbjct: 61 SLLAFLKY 67

BLAST of MC01g0144 vs. ExPASy TrEMBL
Match: U7DW91 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G056000 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.67e-09
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0

Query: 14 AFILAVCSAALAV-----ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH 67
          AF+L +  AA AV     ++  APAPAP  EAG+GFSLP+SGA+VG +L++SLL  L+H
Sbjct: 10 AFLLFLVIAAFAVVSAQDSESMAPAPAPGMEAGAGFSLPVSGAIVGFSLVVSLLGFLKH 68

BLAST of MC01g0144 vs. ExPASy TrEMBL
Match: A9P8U7 (Uncharacterized protein OS=Populus trichocarpa OX=3694 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.38e-09
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0

Query: 14 AFILAVCSAALAV-----ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH 67
          AF+L +  AA AV     ++  APAPAP  EAG+GFSLP+SGA+VG +L++SLL  L+H
Sbjct: 10 AFLLFLLIAAFAVVSAQDSESMAPAPAPGMEAGAGFSLPVSGAMVGFSLVVSLLGFLKH 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
PON91673.11.93e-1156.72hypothetical protein TorRG33x02_125040 [Trema orientale][more]
PON58105.11.11e-1055.22hypothetical protein PanWU01x14_168750 [Parasponia andersonii][more]
PNT29920.15.51e-0954.24hypothetical protein POPTR_006G056000 [Populus trichocarpa][more]
KAG6769237.15.51e-0954.24hypothetical protein POTOM_024855 [Populus tomentosa][more]
ABK92800.11.11e-0854.24unknown [Populus trichocarpa][more]
Match NameE-valueIdentityDescription
A0A2P5F1K49.33e-1256.72Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_125040 PE=4 SV... [more]
A0A2P5CAT15.39e-1155.22Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_168750 PE... [more]
F6HL532.61e-0952.94Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g08000 PE=4 SV=... [more]
U7DW912.67e-0954.24Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G056000 PE=4 ... [more]
A9P8U75.38e-0954.24Uncharacterized protein OS=Populus trichocarpa OX=3694 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33659:SF11SUBFAMILY NOT NAMEDcoord: 1..67
NoneNo IPR availablePANTHERPTHR33659PROTEIN, PUTATIVE-RELATED-RELATEDcoord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g0144.1MC01g0144.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane