MC00g_new0377.1 (mRNA) Bitter gourd (Dali-11) v1

Overview
NameMC00g_new0377.1
TypemRNA
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
Locationscaffold18: 8846 .. 14181 (-)
Sequence length1008
RNA-Seq ExpressionMC00g_new0377.1
SyntenyMC00g_new0377.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGAAGCTTATCTCCGACGGTTGCTTCTCCTTTCTTTGCAGAAGATTTCACCGGCGGCCTCCATCACATTTCATAGGGCAACATCATCGCTCTTCCTTCGTCTCCGGCGGCTCCGTCGACTCCATTATACGGTAAGTTCAAATTTCATCTCCGGCCTCCATCGCATGAGCAATCCAGTTCATCAGTTTCCCTTATTTTGTATTTTATGCTATATTTAGGTTTCAATTTTGCACAGAATCGAGGTATATAGTTCTTATTGTTTATGCTCAATTTAGGTTTCAATTTTGGACAGAATCTCTTACTCTTTGGTTCTCATTATCTCTTGCTATATGGTTCTATCATTTATAATAGTGTATATTTGAGTATATATAATATATTGATATTGATTAGGAAATATAATATATCTCTAGTTTAAAGTATCTCGATATATACCAGTGAAACAATTCAAAAAATTAGAACCCAAGCACACAGACCACTTTCCATGGAAAAGGTATTAGGATATACAATATATCTCTAGTTTACAGAGGACTTTCAGTATTACATTGGTATATACGAATATATTTTTCTTTATCCGTTTGTTCTGAACAACGTATATGTGAGGATATATATTGTTTAGATAAGGGTATATATTATATCTCAAGTTTTATGTATCTCGATATATATTGATGGCGATTTAAAGTTAAAAATCTATTGGATATATATCTTACTAATTTACATCAATACATACGGATAAATTTTATATCTCAGAAAGTTTAGTCTATGTTATATCGGATATATCGTATCTTCAATATGTTATACTTTATATCACGTCTTATAGAACTTCATATTGGCTTTCAGCTAGGATTGTTTGCCCTAGAATGAGCCTTTACTATTTTACATGTTTTAGGTAAATATATATTAGTTGAATTACGTTAATATGGTCAAGTGCAAAGGGCTACCAAAACAGAAGGAAAGAATAAGAAGTAATAGGTTACTTAACCAATCTTCCAACAAGTCGAAGAAAGACCATTTATATATTAATCTTAGCTTAGAGGTAAGCAATAATTTCATTATATTATTTTCAAGATCTATATAGGTTATAAATACATTGTATGTTTTAAATTGGGTTGCTCTTAGGATAGCACTGAGGAAGACACACAAAAAAAGGATGCTCAGCCATTGAAGCCTACCTTCTACAAAGATTTGTTCGGTAATATGCCACGTTATAAGAAGTACTCGCCAATAATCATTTTACCATAACTAAATGAAAAAGTTAAGACGGAAGTTACTATATGTGATCCTATAGTTGAGTTTCCAAATGAATATGAAGTTGTTGGAACTCAAATTGTTTCTTTTGCGGTAATACATATAGATACTCTTTATATTTAGCACATTTAATAACGATTATATGGATATTAATATGTTATATTCAGGTACGTGCCGATCAACCTCTTATTGAGGAAATAACAGAAGAAGTAATGGTGGATAATGTGGAGGATCAAAGAGAGAAAAGGAAAGAGATAGAGGAATATCATGTATATATTCTTTATATTTAGCAGAATTAATCGCCATTATATGCATATTAATATGTTATCTTCAGGTGCCTGCCGATCAACCTCATATTGAGAAAATAACAGAAGAAGAATTAATACTCAATAATGTGAATCGAAGAGGGAAAAGGAAAGAGAGAGAGGAATCTGAGGTATTAAAACCTTATTATTAGTATAATTTCTTTAACTAGTAGTATAATTTGAATTTGGAATAATGCAGGATGATGATATCTCAATAATTGAAAGGTTGAAAGAATTAAAGAATGGTGTGCCAGGATTTAAGGGGAAGAAGAAACAAGATGATATGACAACCAAAAATGTGATGATGGTAATTTTTTTTCTTCTTTTGGTAGAAGTACATTTTTAAGTTAAATTGATTATCTTAATCTTTATTGAATTAGAATGTTAAAAAATCAAGACGTAAAGATAAGAGGAGAAAAGGGAAATATGATAAAGGCAGTTTTATTGGTCAAAACCGGGCAGATGTGTATGGGGTATGTATTATATATCCATGTACTGTATTGTTATTTTTCAATATATCATGTGCATAATTACATTTAGGCTTATATCATGTTCAGGAGGCTCTATTGTTACTTCCGAGGGATAAGTGGTTAAATAGAACCAAACTTCAAATATACTCAAAATTAGAAGTGTTGGAGAATATTAAGGACGTACTTTCAAAAAAACATCTAAGAAAATCTAGAAATACGTGTTTTGGAAGCCTTTTAGATGTAAAGATCAAAAAATATCCACTACAACTAGTTAGCCACATAATTAGGAGAAAATACAGCCCTTGCCTAGGAGATGGAATTAATTTCAACTTTGAGAGCAAAGTGGTTCGTTTTGGATTACAAGAATTTAAGGCTATTACTGGACTTATGTGAGGAACTACTTTCTGTAGACTTCAAAAAACTGAGTGGGAGATTCTTGACTAAATATTTCAACAATTCCTGTGAAGAGGGCAACAATAAGTACCTTGTTTAATTCAATGGATGTGGTGAAGAAGGACAGGGTTAAGATGACACAATTATTTTTGTTGTCAAATTTCTTGTTGGGAAATCAACAAGCAGTCTGAATTGAGGTGGAATATATCAAGCTTCTTGATGACACCGAACAATTTGAGAACTACCCGTGGGGGCGTGTTTGCTATAACTCAACAATTGACTCTATAAAGAAAGCGATTGAAAACCCTGATGCATCGGGTATGTGACTCTCTAGAATACCATGAGCATTGGTTATTTAGGCATACGAATGCATACCATTGCTTTCTTCAGTGGAAACAAAATATGTCAAGCACATATCTACTAAAATACCACTAATGGTAAACTGGGAGGCTACATCACAACCAGAATGGCGGGATATAGCGATTAGAGTTTTCGAGAATGGGGAGGTATTATTTATTTCTTTATTTTCAATAGCGATTAGTTTTATTTTCAATATATATATATATATATATATATATATATATATGGATTTTTATCGTTTTATTTATATTTTTGTGAAAAAGATTTTTGGTCCCTAAATTTTTAAAATTATTACTTGAAATATTTCATTATTTCAAATAAAATATCTATAATTATTTTCAAGGACAGTAGGTTACTCTATCTGATAGATGTGGTAATTCCCTAATCTTTCGATTTTGATTTTATCAAAAAGAATACCAACCCGAATTTTCCCTGACATCAGTCTTTTTTTATCCAATACTGCACGAAAAAACAAGAGATTTTTTTTTATCTATCTATTTGTTTCAAATCACTGATGGGTTAATCCGAATATGCATTAATTTATGATAATAAAATATAATAAATTCTTTTTTATTACAAAAGTTTATTCAAATAATATTCAGGTAGGAAATTTTCAATCAATTAAATCTTTTAATGATTTCTTATAAGTCCTTGGTACTCGCAGAAGTGTGAAACTGGTGAATCCATTCTATGAAGAAATTTAAAATTGCAGGTTCTTCATTATTCGTAATTAATTATTTCTTAATTTCTATAAACAAAAAATCTCTCTCTATATATATATAGAAAATATCTATATATAGCGAAATCCATATTGCACTCATACAAAAAAATTGTTATTGATCCAATATATACAATAAAATATGGGTTTAAATAAATTGAATTGTTCCTGAGACTTTTCAAAAACTACCCATGTCATAAGAGTATAGATTACTATGGACTAATTAAACCAATGACTATACATGATTCAATAAATGAATCAATTACATACCAGTTCCAAGAAATTAGAGGTTATGGTAAAACTTCGTTTAAAACGATGTGGTAGAAAGCAACGTGCGACTTGAAGGACATGATCTACTGTGGATTCTTACACCCACCATTTTTTATTATATAAGAACGAAGATGCTCTTGACTCGACATCGTTTGTTATGTTCCATTCGAGCTCTCATTTTTTGAGGGTTTTGATGTAAATAGTACATGATGGAGCTCGGGTAGAAAGTATTGATTCATTTATCAAGGGCAGAGATCTAGGGTTAGTGCCAATTAATAAGTTGAAACAACATCGTAAGTATATGTTCGATATAGAAATCGAAAGGATCCAATTCGAGCAAGTTTCAAATTCAAACGTCAAATTTGATCAAAAGTGTATCATGCGAGAATCCATTATTTATATGATTCTTTGATAAAAAGAAATCATAAAAAATGGTATGTTGCTGCCATTTTGAAACGATTAAATATCACCGAAGTAATGTCTAAACCCAATATTCAAGGCAAGGATAAAGGATTCTGGAACAAGAAAAAACCTGGATGACTATATTACTGATATGTTAATTTTAATGCAGTTCGAGTTTGAAAATATGTTCGAAGAAGATGAGAATGCACCGATTACATGTAAAAAAAGAGTTTTGGAGGAAGGTGAACCATCGAATAGGAATTCATTGAGTTTTCGATCGAATGAAAGCTATATAACTCCACTTTTTGAAGAGTTTAAAGAAATGGTGTTAAGTAGCCTCGATAACATGAATTGCAAAATCAATACACTCTTTTCTGAGATTGAGAGTGTTAAACGACTGTTTAACGATAGATTAAATGTTATCAGAAAAAAGGATGGGGATGGTGATGGGAGTGCGGGTGGAAGGGATTGTAACAATGATGGTAATGAGGGCAATGATAAACATGGAGAAAATTTGGAAGAATATCAACCAAAGGATGATTTATCAAAGGAAAGTGCAGTTACAACAAAGAGTGATAATGATGGAGATCATAATAATGTGAGTATCTAAAATTAATGCATCGTATATGTGTAAATTATGCTTAATTTTCATAATTTGTGCAAGACATGTGTAATGCTATTTACTACGTTTTACATTTTGCAAGGAACTCGGAGTTAAAGAAACCGAAGAAGATTTAATACAAGATGAGTTCGTATGCACAACATTTTTAAATGAGGTTGATAGGATAGAAGAGGCTTGCCAAAAAAAGGTTTGCTTGTATTGTTTTGATAGTACTAATCTTGATTAGTGGCTCATTCAACGATACTCTATGTTGCTTTGTTATAATTTGATTCGTGCAGGACAAGGAGAACATCGACCAAAATGATATTAATTCGAAAGGAGACATGTACATCCATGCTGTAAGTATTAGATTTATTATTTCAGGATAACTAATATAATGTTTTGTCCAGCCTGACCCATATATATGGATATAGTTATATCATATTGAGAATTATATGCTGGTATATACCTTTATTCTTTGTCAGTGACTGTTGGGTTGTGGCGTCATTTAACCCAGGTCATGTTAGTATACAAATTCTTTAACTTCTCGTGCTTGTTTGTCATCTGA

mRNA sequence

ATGTCAGAAGCTTATCTCCGACGGTTGCTTCTCCTTTCTTTGCAGAAGATTTCACCGGCGGCCTCCATCACATTTCATAGGGCAACATCATCGCTCTTCCTTCGTCTCCGGCGGCTCCGTCGACTCCATTATACGGATAGCACTGAGGAAGACACACAAAAAAAGGATGCTCAGCCATTGAAGCCTACCTTCTACAAAGATTTGTTCGTTGAGTTTCCAAATGAATATGAAGTTGTTGGAACTCAAATTGTTTCTTTTGCGGTACGTGCCGATCAACCTCTTATTGAGGAAATAACAGAAGAAGTAATGGTGGATAATGTGGAGGATCAAAGAGAGAAAAGGAAAGAGATAGAGGAATATCATTTCGAGTTTGAAAATATGTTCGAAGAAGATGAGAATGCACCGATTACATGTAAAAAAAGAGTTTTGGAGGAAGGTGAACCATCGAATAGGAATTCATTGAGTTTTCGATCGAATGAAAGCTATATAACTCCACTTTTTGAAGAGTTTAAAGAAATGGTGTTAAGTAGCCTCGATAACATGAATTGCAAAATCAATACACTCTTTTCTGAGATTGAGAGTGTTAAACGACTGTTTAACGATAGATTAAATGTTATCAGAAAAAAGGATGGGGATGGTGATGGGAGTGCGGGTGGAAGGGATTGTAACAATGATGGTAATGAGGGCAATGATAAACATGGAGAAAATTTGGAAGAATATCAACCAAAGGATGATTTATCAAAGGAAAGTGCAGTTACAACAAAGAGTGATAATGATGGAGATCATAATAATGAACTCGGAGTTAAAGAAACCGAAGAAGATTTAATACAAGATGAGTTCGTATGCACAACATTTTTAAATGAGGTTGATAGGATAGAAGAGGCTTGCCAAAAAAAGGACAAGGAGAACATCGACCAAAATGATATTAATTCGAAAGGAGACATGTACATCCATGCTGTCATGTTAGTATACAAATTCTTTAACTTCTCGTGCTTGTTTGTCATCTGA

Coding sequence (CDS)

ATGTCAGAAGCTTATCTCCGACGGTTGCTTCTCCTTTCTTTGCAGAAGATTTCACCGGCGGCCTCCATCACATTTCATAGGGCAACATCATCGCTCTTCCTTCGTCTCCGGCGGCTCCGTCGACTCCATTATACGGATAGCACTGAGGAAGACACACAAAAAAAGGATGCTCAGCCATTGAAGCCTACCTTCTACAAAGATTTGTTCGTTGAGTTTCCAAATGAATATGAAGTTGTTGGAACTCAAATTGTTTCTTTTGCGGTACGTGCCGATCAACCTCTTATTGAGGAAATAACAGAAGAAGTAATGGTGGATAATGTGGAGGATCAAAGAGAGAAAAGGAAAGAGATAGAGGAATATCATTTCGAGTTTGAAAATATGTTCGAAGAAGATGAGAATGCACCGATTACATGTAAAAAAAGAGTTTTGGAGGAAGGTGAACCATCGAATAGGAATTCATTGAGTTTTCGATCGAATGAAAGCTATATAACTCCACTTTTTGAAGAGTTTAAAGAAATGGTGTTAAGTAGCCTCGATAACATGAATTGCAAAATCAATACACTCTTTTCTGAGATTGAGAGTGTTAAACGACTGTTTAACGATAGATTAAATGTTATCAGAAAAAAGGATGGGGATGGTGATGGGAGTGCGGGTGGAAGGGATTGTAACAATGATGGTAATGAGGGCAATGATAAACATGGAGAAAATTTGGAAGAATATCAACCAAAGGATGATTTATCAAAGGAAAGTGCAGTTACAACAAAGAGTGATAATGATGGAGATCATAATAATGAACTCGGAGTTAAAGAAACCGAAGAAGATTTAATACAAGATGAGTTCGTATGCACAACATTTTTAAATGAGGTTGATAGGATAGAAGAGGCTTGCCAAAAAAAGGACAAGGAGAACATCGACCAAAATGATATTAATTCGAAAGGAGACATGTACATCCATGCTGTCATGTTAGTATACAAATTCTTTAACTTCTCGTGCTTGTTTGTCATCTGA

Protein sequence

MSEAYLRRLLLLSLQKISPAASITFHRATSSLFLRLRRLRRLHYTDSTEEDTQKKDAQPLKPTFYKDLFVEFPNEYEVVGTQIVSFAVRADQPLIEEITEEVMVDNVEDQREKRKEIEEYHFEFENMFEEDENAPITCKKRVLEEGEPSNRNSLSFRSNESYITPLFEEFKEMVLSSLDNMNCKINTLFSEIESVKRLFNDRLNVIRKKDGDGDGSAGGRDCNNDGNEGNDKHGENLEEYQPKDDLSKESAVTTKSDNDGDHNNELGVKETEEDLIQDEFVCTTFLNEVDRIEEACQKKDKENIDQNDINSKGDMYIHAVMLVYKFFNFSCLFVI
Homology
The following BLAST results are available for this feature:
BLAST of MC00g_new0377.1 vs.
Match NameE-valueIdentityDescription
BLAST of MC00g_new0377.1 vs.
Match NameE-valueIdentityDescription
BLAST of MC00g_new0377.1 vs.
Match NameE-valueIdentityDescription
BLAST of MC00g_new0377.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..267

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MC00g_new0377MC00g_new0377gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MC00g_new0377.1-cdsMC00g_new0377.1-cds-scaffold18:8846..8896CDS
MC00g_new0377.1-cdsMC00g_new0377.1-cds-scaffold18:9055..9114CDS
MC00g_new0377.1-cdsMC00g_new0377.1-cds-scaffold18:9206..9310CDS
MC00g_new0377.1-cdsMC00g_new0377.1-cds-scaffold18:9417..9845CDS
MC00g_new0377.1-cdsMC00g_new0377.1-cds-scaffold18:12664..12765CDS
MC00g_new0377.1-cdsMC00g_new0377.1-cds-scaffold18:12840..12892CDS
MC00g_new0377.1-cdsMC00g_new0377.1-cds-scaffold18:12989..13061CDS
MC00g_new0377.1-cdsMC00g_new0377.1-cds-scaffold18:14047..14181CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MC00g_new0377.1MC00g_new0377.1-proteinpolypeptide