MC00g0375.1 (mRNA) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0375.1
Type	mRNA
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	BEST Arabidopsis thaliana protein match is: reduced male fertility .
Location	scaffold7: 535433 .. 538510 (-)
Sequence length	990
RNA-Seq Expression	MC00g0375.1
Synteny	MC00g0375.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAAAAACTGAGCATTTCCTCAGCGCGCGATCGAGTGGTTACGAGATCTCAATCCAGTGCCATGGAGCGGGAGAGATTGTCTAAGCGATCGCCGATTGCTGCTGCGGAGCCGGAGGGAGTAATGGCGAAGCGAATCCGAAGAGATGTTAAGCATCCGATCATTCATCCTTGCAGCTCTCCTCGTTCCGCCTTTCTCACTGCATCTTCCTCTTCCTGCTGGTTCTTCCTCTCTCTCTGTTGCTCTCCATTTTCATCATCGTTGTTAGTAGGTAATCTTAATTTCAGTTTCGCGCCTAAAAACATGCTTACCTGTACTGTAGACCTGAATGCGTTTGTGTTTTCTACCGTTTTGCGACGGTGAGGAAATTCGAATGTGATTTGCTTTGAAGTGATTATAATTACGCATAGTTCGAAAATTGAGATATGAAGTTATTTCCTCGACTTTGAGGCTCTCTGAGCTTGATTGTATGTTCGAATTTGTATAGTACTGCAAAGGATTTTGAAGTAGAAGGAAATGAATAATTCGTGTTGTGTCTGTGAGATTAGCTCAAAGTGAATGTTTGAAGAATCTATCGCAGCTAAAACTTGTTCGTTCTGATAACATTTCCTGAATCTCTTAGAATTTGATCATAAGTCCTAACAGTTCGTAATGTAAATAGTACTGCCAATTCTTCAGTATAGTTTCCAAGTGTTTATTGGACATGTAAAAGGAGCGAAACTAGTTCAGTGTTTAAATTTAAATTTCTTATTTATCACATTCAGTATTCCGAGTCTTCTCTATATGTATCAGTCCTACTTCTAAGATTTCGATAATGTGATTGTTCATATTTTACAGTTTAAAGCTACTTGCTACAGTTTAAACCTTCAATTTTGACTCATTTCTTATGTTGGGAATCGAAAGCTACTTTGTTTATTAAGCCATTAGTCTTAAATTTGGTTGATCGGGATTGAGATTGATGGATCATAGAATAGAAATAATACTTTGTTTCAAAGCTGAGAATATGTAATTTAACCTTATTTTCGTGACGAATGAACATGGAAGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTTGACGGAAGATCTCTGATGATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTTATGGAAGACAGCATATGGAAGTATGTCTGCCTGCGTGATCTTCAGGTCTCTGCTCCTCAAATCACGGCCTTCAAATGGATTAAACTCTATGTTTCCGCCTTCGGTAAGGATCGGGTTCCGAGTCCTCCGAGTTGTGTTCTGCCTCTTTTGAATAAGTTATGCGTTTGCCTAACCATTCAATCAACCATGTTCCAGACGGAAGCCACTCTTACATTTTCCGGCAGCAGGAGAAGCATCTTGGTGAGTGATTGGGATGCAAAAACTTATTATCAGAAGAGATTGTTGTTCTGACTAAGTATTTAACTGTGTCTAATCTTATTATCACATCTTACCAAATAACTTGATATTCAAAGTTCATTGAATCTTAAGTTATTTTAGAGGGTGTAGGCATTATGAGATCCATCATTTTGAGGTTAAAGCTTTCATACTGCTCCTTTGGAATCCTCCTATAAAGTAGATATTTCATAATCCCAATATATTAAATGCACTGTAGTCTGATTCTTTACCATATTGTTATATTTTTTGAGGAAACCAGATTGGATGCGAATTGGGGCATTTTCCATGGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAGTGAAAATCCCAAAACAGGATTCAAAGGATAACATGTTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCTGGTAGTTTTAAGCTTCCTAGAAGTTTGTCATTTTCTTTCATTGTTCTCGTAATTTGGCAATCTTATAATCCTATGTCTATAAGTAAACTTACATTATCTTTGGACTAATGTGGCAGATCTACAACTTGTTCGTTGTCCCGTCTGCGACCTGAATACATGTGATGGTAAGCCCCTCGAGCAAACATTTTGGATGCCACTAAAATGTAGAATTTCACTTGTTGCAAGAGTTTAGTACTTTCGGAGTAAATTGATATACCATACTATGTATAAAAGAACTTCACAGCTAGGCTTATTCACTTCCAAATTTTACTGAAAATTAAACCCAATACTATTTTGAAATACGGATGGTAATGATCACATACCCCAATCATCCGTTAATCAGCACTAGTTCATAGTCAACCACCCAAACATGAATTAGACCAAACAATTTACTTGAATAATCACTGCAGGAAGAATATTTGATGTACAACTTGTTGGCTCTTGCTGATACTGCTAATATTATTATTATGTAGGAACAATGCAGACGTTGGATGCGAGGCACATAGAGTTGTTCCTAAATGAAGGTTACCAAGATGGGAGTTGGGATTATCAGATTGTAGGTTCCCATGATATCAGGAAGCCTACAGAAGCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGGAAGACTCTTCAACCTCTGGTATAGCAACTGTCCAGGAAAAGTATTTTTAATACACTAACAATGAAGTTCTTGATCTTGAGCTTTTGAGTTACATATTATTAAATCCGTGCAAACTCAGTTATGTTTTTAGATCTTGAAGGTTGTTGTAACTCACAAAATTAAACCATATGCGACCAAAAAATATCGAGTTGTGGAGATTGAATTATGAACTTATAAATGCATGAATTGGCAGGAATACTGGATATGCAAACATGGAGTGGAAAGCGTACAGATTGGCAACCAAAGGCTATGATCACTCTCCATGCCGTTGCTGTAAACACCTATTTACAAGACAATGAAGGTAAATGGCCTTCCACTCTTAATATGATATTCGAAAGGGTGAAAAGTGGTGTTTATGAATGTAGTGAAGTTGGGTGGGAAGTAGTTTTGTCAGAAGTGCTTTTACCTGTAAAAACAATTGTAAAGATATGTTAATCTTGTTTGAGGGATGCAGGAGTTCATGTGAAATACCAGGCCATGAGAGGAGGAGCAAATGGAGAAGTGGTTTCTATCAGAATCTCTCAGCAGCTTCTG

mRNA sequence

ATGGGGAAAAAACTGAGCATTTCCTCAGCGCGCGATCGAGTGGTTACGAGATCTCAATCCAGTGCCATGGAGCGGGAGAGATTGTCTAAGCGATCGCCGATTGCTGCTGCGGAGCCGGAGGGAGTAATGGCGAAGCGAATCCGAAGAGATGTTAAGCATCCGATCATTCATCCTTGCAGCTCTCCTCGTTCCGCCTTTCTCACTGCATCTTCCTCTTCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTTGACGGAAGATCTCTGATGATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTTATGGAAGACAGCATATGGAAGTATGTCTGCCTGCGTGATCTTCAGGTCTCTGCTCCTCAAATCACGGCCTTCAAATGGATTAAACTCTATGTTTCCGCCTTCGACGGAAGCCACTCTTACATTTTCCGGCAGCAGGAGAAGCATCTTGATTGGATGCGAATTGGGGCATTTTCCATGGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAGTGAAAATCCCAAAACAGGATTCAAAGGATAACATGTTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCTGGAACAATGCAGACGTTGGATGCGAGGCACATAGAGTTGTTCCTAAATGAAGGTTACCAAGATGGGAGTTGGGATTATCAGATTGTAGGTTCCCATGATATCAGGAAGCCTACAGAAGCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGGAAGACTCTTCAACCTCTGGAATACTGGATATGCAAACATGGAGTGGAAAGCGTACAGATTGGCAACCAAAGGCTATGATCACTCTCCATGCCGTTGCTGTAAACACCTATTTACAAGACAATGAAGGAGTTCATGTGAAATACCAGGCCATGAGAGGAGGAGCAAATGGAGAAGTGGTTTCTATCAGAATCTCTCAGCAGCTTCTG

Coding sequence (CDS)

ATGGGGAAAAAACTGAGCATTTCCTCAGCGCGCGATCGAGTGGTTACGAGATCTCAATCCAGTGCCATGGAGCGGGAGAGATTGTCTAAGCGATCGCCGATTGCTGCTGCGGAGCCGGAGGGAGTAATGGCGAAGCGAATCCGAAGAGATGTTAAGCATCCGATCATTCATCCTTGCAGCTCTCCTCGTTCCGCCTTTCTCACTGCATCTTCCTCTTCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTTGACGGAAGATCTCTGATGATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTTATGGAAGACAGCATATGGAAGTATGTCTGCCTGCGTGATCTTCAGGTCTCTGCTCCTCAAATCACGGCCTTCAAATGGATTAAACTCTATGTTTCCGCCTTCGACGGAAGCCACTCTTACATTTTCCGGCAGCAGGAGAAGCATCTTGATTGGATGCGAATTGGGGCATTTTCCATGGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAGTGAAAATCCCAAAACAGGATTCAAAGGATAACATGTTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCTGGAACAATGCAGACGTTGGATGCGAGGCACATAGAGTTGTTCCTAAATGAAGGTTACCAAGATGGGAGTTGGGATTATCAGATTGTAGGTTCCCATGATATCAGGAAGCCTACAGAAGCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGGAAGACTCTTCAACCTCTGGAATACTGGATATGCAAACATGGAGTGGAAAGCGTACAGATTGGCAACCAAAGGCTATGATCACTCTCCATGCCGTTGCTGTAAACACCTATTTACAAGACAATGAAGGAGTTCATGTGAAATACCAGGCCATGAGAGGAGGAGCAAATGGAGAAGTGGTTTCTATCAGAATCTCTCAGCAGCTTCTG

Protein sequence

MGKKLSISSARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

Homology

[Close]

BLAST of MC00g0375.1 vs. ExPASy Swiss-Prot
Match: Q9M365 (Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 6.0e-95
Identity = 170/340 (50.00%), Postives = 240/340 (70.59%), Query Frame = 0


Query: 11  RDRVVTRSQSSAMERE---RLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFL 70
           R  V +  Q + ++RE   R  +R   ++ +  G + + IR          C SPR +  
Sbjct: 29  RKLVQSNEQKNDIQREEDGRAKRRIVQSSDQKNGKILRGIR---------GCVSPRCSAQ 88

Query: 71  TASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQ 130
           T  S   WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQV  P 
Sbjct: 89  TYQSRFSWYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVPVPF 148

Query: 131 ITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQD 190
             +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF +DS  +LL+E L  ++K P++ 
Sbjct: 149 PVSSTWIKIYASAFDGSHSYLFRQKEKHIDWMRIGAFVLDSRTSLLTESLSGRLKFPREG 208

Query: 191 SKDNMLE-SGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQ 250
           + + ML+ SG C+++++K+GIWIA                GTMQTLDARHIELFL+EGY+
Sbjct: 209 TIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSEGYK 268

Query: 251 DGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITL 310
           DGSWDY ++GSH ++K   AA GAIFD+KHL++SS SGIL++++W+G+  D QPKA+I  
Sbjct: 269 DGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAVIAP 328

Query: 311 HAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 331
           HAVAV+T LQ+NEG+ VKY  M+ G +G++VSIRISQQLL
Sbjct: 329 HAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 359

[Close]

BLAST of MC00g0375.1 vs. ExPASy Swiss-Prot
Match: Q9FGB8 (Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE=2 SV=2)

HSP 1 Score: 344.4 bits (882), Expect = 1.5e-93
Identity = 157/292 (53.77%), Postives = 215/292 (73.63%), Query Frame = 0


Query: 56  IHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKY 115
           IH C SPR +  T  S   WY+ D+WT + +FLDG+SL+ L AT++WFY++ MED++W++
Sbjct: 64  IHGCVSPRCSAPTYQSRFSWYEQDIWTYITRFLDGKSLVKLGATNKWFYKIAMEDTVWRF 123

Query: 116 VCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSE 175
            CLRDLQV      +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF +DS  + L+E
Sbjct: 124 ACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAFVLDSRTSFLTE 183

Query: 176 RLGSQVKIPKQDSKDNMLE-SGCCVLHNVKTGIWIA----------------GTMQTLDA 235
            L  ++K+P + + + ML+ SG C+++++K+GIWIA                GTMQTLD 
Sbjct: 184 SLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLSTCDGTMQTLDV 243

Query: 236 RHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGK 295
           RHIELFL+EGY+DGSWDY ++GSH + K   AA GAIFD+KHL+ SS+SGIL++++W+G+
Sbjct: 244 RHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSSGILNLKSWTGE 303

Query: 296 RTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 331
             D QPKA+I  HAVAV+T LQ NEG+ VKY  M+ G +G++VSIRISQQLL
Sbjct: 304 ADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQQLL 355

[Close]

BLAST of MC00g0375.1 vs. NCBI nr
Match: XP_022152035.1 (probable F-box protein At3g61730 [Momordica charantia])

HSP 1 Score: 650 bits (1678), Expect = 4.35e-235
Identity = 330/346 (95.38%), Postives = 330/346 (95.38%), Query Frame = 0


Query: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCS 60
           MGKKLSISSARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCS
Sbjct: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCS 60

Query: 61  SPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRD 120
           SPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRD
Sbjct: 61  SPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRD 120

Query: 121 LQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQ 180
           LQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQ
Sbjct: 121 LQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQ 180

Query: 181 VKIPKQDSKDNMLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELF 240
           VKIPKQDSKDNMLESGCCVLHNVKTGIWIA                GTMQTLDARHIELF
Sbjct: 181 VKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELF 240

Query: 241 LNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP 300
           LNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP
Sbjct: 241 LNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP 300

Query: 301 KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 330
           KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
Sbjct: 301 KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 346

[Close]

BLAST of MC00g0375.1 vs. NCBI nr
Match: KAG6575300.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 571 bits (1472), Expect = 7.39e-204
Identity = 290/339 (85.55%), Postives = 309/339 (91.15%), Query Frame = 0


Query: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKR-SPIAAAEPEGVMAKRIRRDVKHPIIHPC 60
           MGKKLSI+SARDRVVTRSQS AMERE++S   +P+ A EPEG M KR+RRD+K   IH C
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEG-MVKRMRRDIKP--IHSC 60

Query: 61  SSPRSAFLTA--------SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTA        SSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS
Sbjct: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120

Query: 121 IWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVA 180
           IWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF MDSSV 
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180

Query: 181 LLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIAGTMQTLDARHIELFLNEGYQD 240
           LLSERLGSQVKIPKQDS DN LESGCC+L NVKTGIWIAGTMQTLDARHIELFLNEGYQD
Sbjct: 181 LLSERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIAGTMQTLDARHIELFLNEGYQD 240

Query: 241 GSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLH 300
           GSW+YQI+GSHDIRKPTE+ASGAIFDVKHL+DSSTSGILD+++W+G RTDWQPKAMITL+
Sbjct: 241 GSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLN 300

Query: 301 AVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 330
           AVAVNTYLQDNEGVHVKYQAM+ GANGEVVSIRISQQLL
Sbjct: 301 AVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336

[Close]

BLAST of MC00g0375.1 vs. NCBI nr
Match: XP_004140675.1 (probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical protein Csa_005078 [Cucumis sativus])

HSP 1 Score: 566 bits (1458), Expect = 2.01e-201
Identity = 294/358 (82.12%), Postives = 312/358 (87.15%), Query Frame = 0


Query: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRS----PIAAAEPEGVMAKRIRRDVKHPII 60
           MGKKLSI+SARDRVVTRSQS +MER +++KRS    P+ AAEPEG M KR+RRD+K   I
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEG-MVKRMRRDIKP--I 60

Query: 61  HPCSSPRSAFLTA--------SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVM 120
           H CSSPRSAFLTA        SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VM
Sbjct: 61  HSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVM 120

Query: 121 EDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDS 180
           EDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAF +DS
Sbjct: 121 EDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDS 180

Query: 181 SVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIA----------------GT 240
           SVALLSERLGSQ+KIPKQDS DN LESGCCVLHNVKTGIWIA                GT
Sbjct: 181 SVALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGT 240

Query: 241 MQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDM 300
           MQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHLEDSSTSG+LD+
Sbjct: 241 MQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDL 300

Query: 301 QTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 330
           ++W+G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Sbjct: 301 KSWTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of MC00g0375.1 vs. NCBI nr
Match: XP_023548391.1 (probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564 bits (1454), Expect = 7.34e-201
Identity = 292/355 (82.25%), Postives = 310/355 (87.32%), Query Frame = 0


Query: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKR-SPIAAAEPEGVMAKRIRRDVKHPIIHPC 60
           MGKKLSI+SARDRVVTRSQS AMERE++S   +P+ A EPEG M KR+RRD+K   IH C
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEG-MVKRMRRDIKP--IHSC 60

Query: 61  SSPRSAFLTA--------SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTA        SSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS
Sbjct: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120

Query: 121 IWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVA 180
           IWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF MDSSV 
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180

Query: 181 LLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIA----------------GTMQT 240
           LLSERLGSQVKIPKQDS DN LESGCCVLHNVKTGIWIA                GTMQT
Sbjct: 181 LLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTW 300
           LDARHIELFLNEGYQDGSW+YQI+GSHDIRKPTE+ASGAIFDVKHL+DSSTSGILD+++W
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300

Query: 301 SGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 330
           +G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+ GANGEVVSIRISQQLL
Sbjct: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352

[Close]

BLAST of MC00g0375.1 vs. NCBI nr
Match: XP_038875515.1 (probable F-box protein At3g61730 [Benincasa hispida])

HSP 1 Score: 561 bits (1447), Expect = 9.20e-200
Identity = 293/357 (82.07%), Postives = 311/357 (87.11%), Query Frame = 0


Query: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRSP---IAAAEPEGVMAKRIRRDVKHPIIH 60
           MGKKLSI+SARDRVVTRS S AMER ++SKRS    + AAEPEG + KR+RRD+K   IH
Sbjct: 1   MGKKLSIASARDRVVTRSLSIAMERAKMSKRSSPNSVVAAEPEGTV-KRMRRDIKP--IH 60

Query: 61  PCSSPRSAFLTA--------SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME 120
            CSSPRSAFLTA        SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME
Sbjct: 61  SCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME 120

Query: 121 DSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSS 180
           DSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF +DSS
Sbjct: 121 DSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSS 180

Query: 181 VALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIA----------------GTM 240
           VALLSERLGSQ+KIPKQDS D  LESGCCVLHNVKTGIWIA                GTM
Sbjct: 181 VALLSERLGSQMKIPKQDSTDKTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTM 240

Query: 241 QTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQ 300
           QTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHL+DSSTSGILD++
Sbjct: 241 QTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLK 300

Query: 301 TWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 330
           +W+G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+ GANGEVVSIRISQQLL
Sbjct: 301 SWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 354

[Close]

BLAST of MC00g0375.1 vs. ExPASy TrEMBL
Match: A0A6J1DCT6 (probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 PE=4 SV=1)

HSP 1 Score: 650 bits (1678), Expect = 2.11e-235
Identity = 330/346 (95.38%), Postives = 330/346 (95.38%), Query Frame = 0


Query: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCS 60
           MGKKLSISSARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCS
Sbjct: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCS 60

Query: 61  SPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRD 120
           SPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRD
Sbjct: 61  SPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRD 120

Query: 121 LQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQ 180
           LQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQ
Sbjct: 121 LQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQ 180

Query: 181 VKIPKQDSKDNMLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELF 240
           VKIPKQDSKDNMLESGCCVLHNVKTGIWIA                GTMQTLDARHIELF
Sbjct: 181 VKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELF 240

Query: 241 LNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP 300
           LNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP
Sbjct: 241 LNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP 300

Query: 301 KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 330
           KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
Sbjct: 301 KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 346

[Close]

BLAST of MC00g0375.1 vs. ExPASy TrEMBL
Match: A0A0A0KD88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1)

HSP 1 Score: 566 bits (1458), Expect = 9.75e-202
Identity = 294/358 (82.12%), Postives = 312/358 (87.15%), Query Frame = 0


Query: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRS----PIAAAEPEGVMAKRIRRDVKHPII 60
           MGKKLSI+SARDRVVTRSQS +MER +++KRS    P+ AAEPEG M KR+RRD+K   I
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEG-MVKRMRRDIKP--I 60

Query: 61  HPCSSPRSAFLTA--------SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVM 120
           H CSSPRSAFLTA        SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VM
Sbjct: 61  HSCSSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVM 120

Query: 121 EDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDS 180
           EDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAF +DS
Sbjct: 121 EDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDS 180

Query: 181 SVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIA----------------GT 240
           SVALLSERLGSQ+KIPKQDS DN LESGCCVLHNVKTGIWIA                GT
Sbjct: 181 SVALLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGT 240

Query: 241 MQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDM 300
           MQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHLEDSSTSG+LD+
Sbjct: 241 MQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDL 300

Query: 301 QTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 330
           ++W+G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Sbjct: 301 KSWTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of MC00g0375.1 vs. ExPASy TrEMBL
Match: A0A5D3DMQ8 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001350 PE=4 SV=1)

HSP 1 Score: 556 bits (1434), Expect = 4.57e-198
Identity = 291/359 (81.06%), Postives = 307/359 (85.52%), Query Frame = 0


Query: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRS-----PIAAAEPEGVMAKRIRRDVKHPI 60
           M KKLSI+SARDRVVTRSQS +MER ++SKRS     P+ AAEPEG M KR+RRD+K   
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEG-MVKRMRRDIKP-- 60

Query: 61  IHPCSSPRSAFLTA--------SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLV 120
           IH CSSP SAFLTA        SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLV
Sbjct: 61  IHSCSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLV 120

Query: 121 MEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMD 180
           MEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAF +D
Sbjct: 121 MEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLD 180

Query: 181 SSVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIA----------------G 240
           SSVALLSERLGSQ+K+PKQ S  N LESGCCVLHNVKTGIWIA                G
Sbjct: 181 SSVALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDG 240

Query: 241 TMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILD 300
           TMQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHLEDSSTSGILD
Sbjct: 241 TMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILD 300

Query: 301 MQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 330
           +++W+G R DWQPKAMITL AVAVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Sbjct: 301 LKSWTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of MC00g0375.1 vs. ExPASy TrEMBL
Match: A0A1S3CBL0 (probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV=1)

HSP 1 Score: 529 bits (1362), Expect = 1.89e-187
Identity = 273/337 (81.01%), Postives = 287/337 (85.16%), Query Frame = 0


Query: 23  MERERLSKRS-----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTA-------- 82
           MER ++SKRS     P+ AAEPEG M KR+RRD+K   IH CSSP SAFLTA        
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEG-MVKRMRRDIKP--IHSCSSPHSAFLTAHSSASSSA 60

Query: 83  SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQIT 142
           SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQV APQ T
Sbjct: 61  SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHT 120

Query: 143 AFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSK 202
           AFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAF +DSSVALLSERLGSQ+K+PKQ S 
Sbjct: 121 AFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGST 180

Query: 203 DNMLESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGS 262
            N LESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGS
Sbjct: 181 ANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGS 240

Query: 263 WDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAV 322
           W+YQIVGSHDIRKPTE+ASGAIFDVKHLEDSSTSGILD+++W+G R DWQPKAMITL AV
Sbjct: 241 WEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAV 300

Query: 323 AVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 330
           AVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Sbjct: 301 AVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 334

[Close]

BLAST of MC00g0375.1 vs. ExPASy TrEMBL
Match: A0A6J1EVC3 (probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 PE=4 SV=1)

HSP 1 Score: 479 bits (1234), Expect = 8.47e-169
Identity = 237/271 (87.45%), Postives = 247/271 (91.14%), Query Frame = 0


Query: 76  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIK 135
           YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQV APQ TAFKWIK
Sbjct: 11  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 70

Query: 136 LYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLES 195
           LYVSAFDGSHSYIFRQQEKHLDWMRIGAF MDSSV LLSERLGSQVKIPKQDS DN LES
Sbjct: 71  LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLES 130

Query: 196 GCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWDYQIV 255
           GCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSW+YQI+
Sbjct: 131 GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIL 190

Query: 256 GSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYL 315
           GSHDIRKPTE+ASGAIFDVKHL+DSSTSGILD+++W+G RTDWQPKAMITL+AVAVNTYL
Sbjct: 191 GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYL 250

Query: 316 QDNEGVHVKYQAMRGGANGEVVSIRISQQLL 330
           QDNEGVHVKYQAM+ GANGEVVSIRISQQLL
Sbjct: 251 QDNEGVHVKYQAMKAGANGEVVSIRISQQLL 281

[Close]

BLAST of MC00g0375.1 vs. TAIR 10
Match: AT5G36000.1 (BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 344.4 bits (882), Expect = 1.0e-94
Identity = 157/292 (53.77%), Postives = 215/292 (73.63%), Query Frame = 0


Query: 56  IHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKY 115
           IH C SPR +  T  S   WY+ D+WT + +FLDG+SL+ L AT++WFY++ MED++W++
Sbjct: 64  IHGCVSPRCSAPTYQSRFSWYEQDIWTYITRFLDGKSLVKLGATNKWFYKIAMEDTVWRF 123

Query: 116 VCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSE 175
            CLRDLQV      +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF +DS  + L+E
Sbjct: 124 ACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAFVLDSRTSFLTE 183

Query: 176 RLGSQVKIPKQDSKDNMLE-SGCCVLHNVKTGIWIA----------------GTMQTLDA 235
            L  ++K+P + + + ML+ SG C+++++K+GIWIA                GTMQTLD 
Sbjct: 184 SLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLSTCDGTMQTLDV 243

Query: 236 RHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGK 295
           RHIELFL+EGY+DGSWDY ++GSH + K   AA GAIFD+KHL+ SS+SGIL++++W+G+
Sbjct: 244 RHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSSGILNLKSWTGE 303

Query: 296 RTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 331
             D QPKA+I  HAVAV+T LQ NEG+ VKY  M+ G +G++VSIRISQQLL
Sbjct: 304 ADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQQLL 355

[Close]

BLAST of MC00g0375.1 vs. TAIR 10
Match: AT3G61730.1 (reduced male fertility )

HSP 1 Score: 331.6 bits (849), Expect = 7.0e-91
Identity = 166/340 (48.82%), Postives = 235/340 (69.12%), Query Frame = 0


Query: 11  RDRVVTRSQSSAMERE---RLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFL 70
           R  V +  Q + ++RE   R  +R   ++ +  G + + IR          C SPR +  
Sbjct: 29  RKLVQSNEQKNDIQREEDGRAKRRIVQSSDQKNGKILRGIR---------GCVSPRCSAQ 88

Query: 71  TASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQ 130
           T  S   WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQV  P 
Sbjct: 89  TYQSRFSWYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVPVPF 148

Query: 131 ITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQD 190
             +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF +DS  +LL+E L  ++K P++ 
Sbjct: 149 PVSSTWIKIYASAFDGSHSYLFRQKEKH-----IGAFVLDSRTSLLTESLSGRLKFPREG 208

Query: 191 SKDNMLE-SGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQ 250
           + + ML+ SG C+++++K+GIWIA                GTMQTLDARHIELFL+EGY+
Sbjct: 209 TIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSEGYK 268

Query: 251 DGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITL 310
           DGSWDY ++GSH ++K   AA GAIFD+KHL++SS SGIL++++W+G+  D QPKA+I  
Sbjct: 269 DGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAVIAP 328

Query: 311 HAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 331
           HAVAV+T LQ+NEG+ VKY  M+ G +G++VSIRISQQLL
Sbjct: 329 HAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 354

[Close]

BLAST of MC00g0375.1 vs. TAIR 10
Match: AT3G62500.1 (BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 159.8 bits (403), Expect = 3.6e-39
Identity = 77/152 (50.66%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 157 DWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIAGTMQTL 216
           DWM IGAF +DS  +LL+E L  ++K+PK+ + + ML+    ++  V        TMQTL
Sbjct: 178 DWMPIGAFVLDSRTSLLTESLSGRLKVPKEGTIERMLQKYLQLVRPVCD----LRTMQTL 237

Query: 217 DARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWS 276
           DARHIELFL+EGY+DGSWDY ++GSH ++K   AA GAIFD+KH ++SS+SGIL++++W+
Sbjct: 238 DARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHHKESSSSGILNLKSWT 297

Query: 277 GKRTDWQPKAMITLHAVAVNTYLQDNEGVHVK 309
           G+    QPKA+I  HAVAV+T L++NE   ++
Sbjct: 298 GQPDISQPKAVIAPHAVAVHTRLRENEVAEIQ 325

The following BLAST results are available for this feature:

BLAST of MC00g0375.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M365	6.0e-95	50.00	Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=...	[more]
Q9FGB8	1.5e-93	53.77	Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE...	[more]

BLAST of MC00g0375.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152035.1	4.35e-235	95.38	probable F-box protein At3g61730 [Momordica charantia]	[more]
KAG6575300.1	7.39e-204	85.55	putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004140675.1	2.01e-201	82.12	probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical prot...	[more]
XP_023548391.1	7.34e-201	82.25	probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo]	[more]
XP_038875515.1	9.20e-200	82.07	probable F-box protein At3g61730 [Benincasa hispida]	[more]

BLAST of MC00g0375.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCT6	2.11e-235	95.38	probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 ...	[more]
A0A0A0KD88	9.75e-202	82.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1	[more]
A0A5D3DMQ8	4.57e-198	81.06	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3CBL0	1.89e-187	81.01	probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV...	[more]
A0A6J1EVC3	8.47e-169	87.45	probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 P...	[more]

BLAST of MC00g0375.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36000.1	1.0e-94	53.77	BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G617...	[more]
AT3G61730.1	7.0e-91	48.82	reduced male fertility	[more]
AT3G62500.1	3.6e-39	50.66	BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G6174...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 76..158 e-value: 5.7E-6 score: 28.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR47149	F-BOX PROTEIN RMF	coord: 17..330
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 79..139

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MC00g0375	MC00g0375	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MC00g0375.1-cds	MC00g0375.1-cds-scaffold7:535433..535512	CDS
MC00g0375.1-cds	MC00g0375.1-cds-scaffold7:535666..535773	CDS
MC00g0375.1-cds	MC00g0375.1-cds-scaffold7:535988..536158	CDS
MC00g0375.1-cds	MC00g0375.1-cds-scaffold7:536670..536831	CDS
MC00g0375.1-cds	MC00g0375.1-cds-scaffold7:537127..537171	CDS
MC00g0375.1-cds	MC00g0375.1-cds-scaffold7:537264..537463	CDS
MC00g0375.1-cds	MC00g0375.1-cds-scaffold7:538287..538510	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MC00g0375.1	MC00g0375.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061458	reproductive system development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding