Lsi08G000950.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G000950.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Molybdopterin synthase sulfur carrier subunit
Location	chr08: 1934643 .. 1935166 (-)
Sequence length	524
RNA-Seq Expression	Lsi08G000950.1
Synteny	Lsi08G000950.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGAGAAGATGGATTTGGATCTGCAGACAGGTCAGGTGGGGAAAAAGTAGAACAACTGGTTCAAATCAAGGCCTTGTTTTTTGCTAGAGCTCGAGATCTTACGGGCATGAATGACATTTTATTGGAGATCCCTTCAGGTAGTACTACCAAGGATTGTCTGGACAAGATTGTAGGCAAATTTCCAAGGCTAGGAGAGATCCTTGGATGTGTGGTTCTGGCTCTGAATGAGGATTATACAACTGAGTCAACAATTGTTAAAGATAAAGATGAGTTGGCAATTATTCCTCCCATAAGTGGTGGCTAACCTTTCTTCTGCTACCATTTTATAGTGATATGTATACATATTTTTCCTTTTGGTGCCTTTTCAAATGTGGAACTTAATAAGTTAATGTGGCCATTGAGATTCTTTGCCAATTCTGTAGAAAATTACTTGTATAATATGTATGTATGTTTTTCTTTGGGATACAATATTCTCATTCAAACTCAATATAGAAATGAGAGCTCAAACATTTCAATCAA

mRNA sequence

ATGAAAGGAGAAGATGGATTTGGATCTGCAGACAGGTCAGGTGGGGAAAAAGTAGAACAACTGGTTCAAATCAAGGCCTTGTTTTTTGCTAGAGCTCGAGATCTTACGGGCATGAATGACATTTTATTGGAGATCCCTTCAGGTAGTACTACCAAGGATTGTCTGGACAAGATTGTAGGCAAATTTCCAAGGCTAGGAGAGATCCTTGGATGTGTGGTTCTGGCTCTGAATGAGGATTATACAACTGAGTCAACAATTGTTAAAGATAAAGATGAGTTGGCAATTATTCCTCCCATAAGTGGTGGCTAACCTTTCTTCTGCTACCATTTTATAGTGATATGTATACATATTTTTCCTTTTGGTGCCTTTTCAAATGTGGAACTTAATAAGTTAATGTGGCCATTGAGATTCTTTGCCAATTCTGTAGAAAATTACTTGTATAATATGTATGTATGTTTTTCTTTGGGATACAATATTCTCATTCAAACTCAATATAGAAATGAGAGCTCAAACATTTCAATCAA

Coding sequence (CDS)

ATGAAAGGAGAAGATGGATTTGGATCTGCAGACAGGTCAGGTGGGGAAAAAGTAGAACAACTGGTTCAAATCAAGGCCTTGTTTTTTGCTAGAGCTCGAGATCTTACGGGCATGAATGACATTTTATTGGAGATCCCTTCAGGTAGTACTACCAAGGATTGTCTGGACAAGATTGTAGGCAAATTTCCAAGGCTAGGAGAGATCCTTGGATGTGTGGTTCTGGCTCTGAATGAGGATTATACAACTGAGTCAACAATTGTTAAAGATAAAGATGAGTTGGCAATTATTCCTCCCATAAGTGGTGGCTAA

Protein sequence

MKGEDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFPRLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPISGG

Homology

[Close]

BLAST of Lsi08G000950.1 vs. ExPASy Swiss-Prot
Match: Q9S7A3 (Molybdopterin synthase sulfur carrier subunit OS=Arabidopsis thaliana OX=3702 GN=At4g10100 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 5.3e-26
Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 22  VQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFPRLGEILGCVVLALNEDYT 81
           V+IK L FARAR+LTG+ D+ L++PSGSTT+ CLD++V KFP L E+  CVVLALNE+YT
Sbjct: 16  VEIKVLLFARARELTGVPDLTLKMPSGSTTQKCLDELVLKFPSLEEVRSCVVLALNEEYT 75

Query: 82  TESTIVKDKDELAIIPPISGG 103
           T+S IV+ +DELAIIPPISGG
Sbjct: 76  TDSAIVQHRDELAIIPPISGG 96

[Close]

BLAST of Lsi08G000950.1 vs. ExPASy Swiss-Prot
Match: B6SXF8 (Molybdopterin synthase sulfur carrier subunit OS=Zea mays OX=4577 GN=VP15 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 16  EKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFPRLGEILGCVVLA 75
           E+      +K LFFARARDLTG+ D  +E+P GST  +CL +++ +FP+L EI G VVLA
Sbjct: 7   EQAAPAATVKVLFFARARDLTGVADSAVEVPPGSTAGECLARVLAQFPKLEEIRGSVVLA 66

Query: 76  LNEDYTTESTIVKDKDELAIIPPISGG 103
           LNE+Y  +S  V D DELA+IPPISGG
Sbjct: 67  LNEEYAADSAAVADGDELAVIPPISGG 93

[Close]

BLAST of Lsi08G000950.1 vs. ExPASy Swiss-Prot
Match: A2X635 (Molybdopterin synthase sulfur carrier subunit OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07667 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 9   SADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFPRLGEI 68
           SAD       +  V++K LFFARARDLTG+ +  +E+P+GST  DCL +++  FPRL EI
Sbjct: 16  SADNPTAAAAKAKVKVKVLFFARARDLTGVTEAPVEVPAGSTAGDCLARVLAAFPRLEEI 75

Query: 69  LGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 103
              +VLALNE+Y  E   V D DELAIIPPISGG
Sbjct: 76  RRSMVLALNEEYAPEDAAVGDGDELAIIPPISGG 109

[Close]

BLAST of Lsi08G000950.1 vs. ExPASy Swiss-Prot
Match: Q6YVX4 (Molybdopterin synthase sulfur carrier subunit OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0558300 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 9   SADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFPRLGEI 68
           SAD       +  V++K LFFARARDLTG+ +  +E+P+GST  DCL +++  FPRL EI
Sbjct: 16  SADNPTAAAAKAKVKVKVLFFARARDLTGVTEAPVEVPAGSTAGDCLARVLAAFPRLEEI 75

Query: 69  LGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 103
              +VLALNE+Y  E   V D DELAIIPPISGG
Sbjct: 76  RRSMVLALNEEYAPEDAAVGDGDELAIIPPISGG 109

[Close]

BLAST of Lsi08G000950.1 vs. ExPASy Swiss-Prot
Match: A8JJB2 (Molybdopterin synthase sulfur carrier subunit OS=Chlamydomonas reinhardtii OX=3055 GN=CHLREDRAFT_109356 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.1e-13
Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 22  VQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFPRLGEILGCVVLALNEDYT 81
           +QIK L+FA++R++ G+N+   E+  G+ T+D L +I+   P L  ++   V ALN++Y 
Sbjct: 1   MQIKVLYFAKSREVAGVNEQTFELGDGAHTEDLLAQIIAAHPALDSVMKTCVFALNQEYV 60

Query: 82  --TESTIVKDKDELAIIPPISGG 103
              +   +KD DE+AIIPP+SGG
Sbjct: 61  RPQDKEALKDGDEVAIIPPLSGG 83

[Close]

BLAST of Lsi08G000950.1 vs. ExPASy TrEMBL
Match: A0A1S4E2J1 (Molybdopterin synthase sulfur carrier subunit OS=Cucumis melo OX=3656 GN=LOC103498674 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.5e-42
Identity = 89/99 (89.90%), Postives = 92/99 (92.93%), Query Frame = 0


Query: 4   EDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFP 63
           EDGFGSADR G +KVEQLVQIK LFFARARDLTG ND+LLEIP GSTTKDCLDKIVGKFP
Sbjct: 8   EDGFGSADRYGEDKVEQLVQIKTLFFARARDLTGTNDVLLEIPLGSTTKDCLDKIVGKFP 67

Query: 64  RLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 103
           RL EILGCVVLALNEDYTTEST+VKD DELAIIPPISGG
Sbjct: 68  RLEEILGCVVLALNEDYTTESTVVKDGDELAIIPPISGG 106

[Close]

BLAST of Lsi08G000950.1 vs. ExPASy TrEMBL
Match: A0A5A7TCZ4 (Molybdopterin synthase sulfur carrier subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00780 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.0e-41
Identity = 87/97 (89.69%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 4   EDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFP 63
           EDGFGSADR G +KVEQLVQIK LFFARARDLTG ND+LLEIP GSTTKDCLDKIVGKFP
Sbjct: 8   EDGFGSADRYGEDKVEQLVQIKTLFFARARDLTGTNDVLLEIPLGSTTKDCLDKIVGKFP 67

Query: 64  RLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPIS 101
           RL EILGCVVLALNEDYTTEST+VKD DELAIIPPIS
Sbjct: 68  RLEEILGCVVLALNEDYTTESTVVKDGDELAIIPPIS 104

[Close]

BLAST of Lsi08G000950.1 vs. ExPASy TrEMBL
Match: A0A0A0KSV6 (Molybdopterin synthase sulfur carrier subunit OS=Cucumis sativus OX=3659 GN=Csa_5G649330 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40
Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 4   EDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFP 63
           EDGF SAD+ G +KVEQLVQIK LFFARARDLTG ND+LLEIP GSTTKDCLDKI+GKFP
Sbjct: 5   EDGFVSADKHGEDKVEQLVQIKTLFFARARDLTGTNDVLLEIPLGSTTKDCLDKIIGKFP 64

Query: 64  RLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 103
           RL EILGCVVLALNEDYTT+STIVKD DELAIIPPISGG
Sbjct: 65  RLEEILGCVVLALNEDYTTDSTIVKDGDELAIIPPISGG 103

[Close]

BLAST of Lsi08G000950.1 vs. ExPASy TrEMBL
Match: A0A6J1EWF4 (Molybdopterin synthase sulfur carrier subunit OS=Cucurbita moschata OX=3662 GN=LOC111438870 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.7e-39
Identity = 82/102 (80.39%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   MKGEDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVG 60
           MKG++       S GEKVE LVQIKALFFARARDLTG+ND++L++PSGST KDCL+KIVG
Sbjct: 1   MKGQEDRLETSDSSGEKVEHLVQIKALFFARARDLTGLNDVILDVPSGSTAKDCLNKIVG 60

Query: 61  KFPRLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 103
           KFPRL EI+GCVVLALNEDYTTESTIVKDKDELAIIPPISGG
Sbjct: 61  KFPRLEEIIGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 102

[Close]

BLAST of Lsi08G000950.1 vs. ExPASy TrEMBL
Match: A0A6J1ICY6 (Molybdopterin synthase sulfur carrier subunit OS=Cucurbita maxima OX=3661 GN=LOC111471951 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.7e-39
Identity = 82/102 (80.39%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   MKGEDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVG 60
           MKG++       S GEKVE LVQIKALFFARARDLTG+ND++L++PSGST KDCL+KIVG
Sbjct: 1   MKGQEYRFETSESSGEKVEHLVQIKALFFARARDLTGLNDMVLDVPSGSTAKDCLNKIVG 60

Query: 61  KFPRLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 103
           KFPRL EI+GCVVLALNEDYTTESTIVKDKDELAIIPPISGG
Sbjct: 61  KFPRLEEIIGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 102

[Close]

BLAST of Lsi08G000950.1 vs. NCBI nr
Match: XP_038890088.1 (molybdopterin synthase sulfur carrier subunit isoform X2 [Benincasa hispida] >XP_038890089.1 molybdopterin synthase sulfur carrier subunit isoform X2 [Benincasa hispida])

HSP 1 Score: 196.8 bits (499), Expect = 8.9e-47
Identity = 95/102 (93.14%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MKGEDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVG 60
           M+GEDGFGSADRSGGEKVE+LV IKALFFARARDLTGMND+LLE+PSGSTTKDCLDKIVG
Sbjct: 1   MEGEDGFGSADRSGGEKVEELVHIKALFFARARDLTGMNDVLLEVPSGSTTKDCLDKIVG 60

Query: 61  KFPRLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 103
           KFPRL EILGCVVLALNEDYTTE+TIVKDKDELAIIPPISGG
Sbjct: 61  KFPRLEEILGCVVLALNEDYTTETTIVKDKDELAIIPPISGG 102

[Close]

BLAST of Lsi08G000950.1 vs. NCBI nr
Match: XP_038890087.1 (molybdopterin synthase sulfur carrier subunit isoform X1 [Benincasa hispida])

HSP 1 Score: 196.8 bits (499), Expect = 8.9e-47
Identity = 95/102 (93.14%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MKGEDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVG 60
           M+GEDGFGSADRSGGEKVE+LV IKALFFARARDLTGMND+LLE+PSGSTTKDCLDKIVG
Sbjct: 43  MEGEDGFGSADRSGGEKVEELVHIKALFFARARDLTGMNDVLLEVPSGSTTKDCLDKIVG 102

Query: 61  KFPRLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 103
           KFPRL EILGCVVLALNEDYTTE+TIVKDKDELAIIPPISGG
Sbjct: 103 KFPRLEEILGCVVLALNEDYTTETTIVKDKDELAIIPPISGG 144

[Close]

BLAST of Lsi08G000950.1 vs. NCBI nr
Match: XP_008459590.1 (PREDICTED: molybdopterin synthase sulfur carrier subunit [Cucumis melo] >XP_016902442.1 PREDICTED: molybdopterin synthase sulfur carrier subunit [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 5.1e-42
Identity = 89/99 (89.90%), Postives = 92/99 (92.93%), Query Frame = 0


Query: 4   EDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFP 63
           EDGFGSADR G +KVEQLVQIK LFFARARDLTG ND+LLEIP GSTTKDCLDKIVGKFP
Sbjct: 8   EDGFGSADRYGEDKVEQLVQIKTLFFARARDLTGTNDVLLEIPLGSTTKDCLDKIVGKFP 67

Query: 64  RLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 103
           RL EILGCVVLALNEDYTTEST+VKD DELAIIPPISGG
Sbjct: 68  RLEEILGCVVLALNEDYTTESTVVKDGDELAIIPPISGG 106

[Close]

BLAST of Lsi08G000950.1 vs. NCBI nr
Match: KAA0039285.1 (molybdopterin synthase sulfur carrier subunit [Cucumis melo var. makuwa] >TYK00470.1 molybdopterin synthase sulfur carrier subunit [Cucumis melo var. makuwa])

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 87/97 (89.69%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 4   EDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFP 63
           EDGFGSADR G +KVEQLVQIK LFFARARDLTG ND+LLEIP GSTTKDCLDKIVGKFP
Sbjct: 8   EDGFGSADRYGEDKVEQLVQIKTLFFARARDLTGTNDVLLEIPLGSTTKDCLDKIVGKFP 67

Query: 64  RLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPIS 101
           RL EILGCVVLALNEDYTTEST+VKD DELAIIPPIS
Sbjct: 68  RLEEILGCVVLALNEDYTTESTVVKDGDELAIIPPIS 104

[Close]

BLAST of Lsi08G000950.1 vs. NCBI nr
Match: XP_004141543.1 (molybdopterin synthase sulfur carrier subunit [Cucumis sativus] >XP_031741905.1 molybdopterin synthase sulfur carrier subunit [Cucumis sativus] >XP_031741906.1 molybdopterin synthase sulfur carrier subunit [Cucumis sativus] >KGN52663.1 hypothetical protein Csa_009162 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 2.1e-40
Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 4   EDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFP 63
           EDGF SAD+ G +KVEQLVQIK LFFARARDLTG ND+LLEIP GSTTKDCLDKI+GKFP
Sbjct: 5   EDGFVSADKHGEDKVEQLVQIKTLFFARARDLTGTNDVLLEIPLGSTTKDCLDKIIGKFP 64

Query: 64  RLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPISGG 103
           RL EILGCVVLALNEDYTT+STIVKD DELAIIPPISGG
Sbjct: 65  RLEEILGCVVLALNEDYTTDSTIVKDGDELAIIPPISGG 103

[Close]

BLAST of Lsi08G000950.1 vs. TAIR 10
Match: AT4G10100.1 (co-factor for nitrate, reductase and xanthine dehydrogenase 7 )

HSP 1 Score: 118.2 bits (295), Expect = 3.8e-27
Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 22  VQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFPRLGEILGCVVLALNEDYT 81
           V+IK L FARAR+LTG+ D+ L++PSGSTT+ CLD++V KFP L E+  CVVLALNE+YT
Sbjct: 16  VEIKVLLFARARELTGVPDLTLKMPSGSTTQKCLDELVLKFPSLEEVRSCVVLALNEEYT 75

Query: 82  TESTIVKDKDELAIIPPISGG 103
           T+S IV+ +DELAIIPPISGG
Sbjct: 76  TDSAIVQHRDELAIIPPISGG 96

[Close]

BLAST of Lsi08G000950.1 vs. TAIR 10
Match: AT4G10100.2 (co-factor for nitrate, reductase and xanthine dehydrogenase 7 )

HSP 1 Score: 118.2 bits (295), Expect = 3.8e-27
Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 22  VQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFPRLGEILGCVVLALNEDYT 81
           V+IK L FARAR+LTG+ D+ L++PSGSTT+ CLD++V KFP L E+  CVVLALNE+YT
Sbjct: 16  VEIKVLLFARARELTGVPDLTLKMPSGSTTQKCLDELVLKFPSLEEVRSCVVLALNEEYT 75

Query: 82  TESTIVKDKDELAIIPPISGG 103
           T+S IV+ +DELAIIPPISGG
Sbjct: 76  TDSAIVQHRDELAIIPPISGG 96

[Close]

BLAST of Lsi08G000950.1 vs. TAIR 10
Match: AT4G10100.3 (co-factor for nitrate, reductase and xanthine dehydrogenase 7 )

HSP 1 Score: 118.2 bits (295), Expect = 3.8e-27
Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 22  VQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFPRLGEILGCVVLALNEDYT 81
           V+IK L FARAR+LTG+ D+ L++PSGSTT+ CLD++V KFP L E+  CVVLALNE+YT
Sbjct: 16  VEIKVLLFARARELTGVPDLTLKMPSGSTTQKCLDELVLKFPSLEEVRSCVVLALNEEYT 75

Query: 82  TESTIVKDKDELAIIPPISGG 103
           T+S IV+ +DELAIIPPISGG
Sbjct: 76  TDSAIVQHRDELAIIPPISGG 96

The following BLAST results are available for this feature:

BLAST of Lsi08G000950.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7A3	5.3e-26	67.90	Molybdopterin synthase sulfur carrier subunit OS=Arabidopsis thaliana OX=3702 GN...	[more]
B6SXF8	1.2e-22	56.32	Molybdopterin synthase sulfur carrier subunit OS=Zea mays OX=4577 GN=VP15 PE=2 S...	[more]
A2X635	1.2e-22	55.32	Molybdopterin synthase sulfur carrier subunit OS=Oryza sativa subsp. indica OX=3...	[more]
Q6YVX4	1.2e-22	55.32	Molybdopterin synthase sulfur carrier subunit OS=Oryza sativa subsp. japonica OX...	[more]
A8JJB2	5.1e-13	40.96	Molybdopterin synthase sulfur carrier subunit OS=Chlamydomonas reinhardtii OX=30...	[more]

BLAST of Lsi08G000950.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2J1	2.5e-42	89.90	Molybdopterin synthase sulfur carrier subunit OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TCZ4	6.0e-41	89.69	Molybdopterin synthase sulfur carrier subunit OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0KSV6	1.0e-40	86.87	Molybdopterin synthase sulfur carrier subunit OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A6J1EWF4	5.7e-39	80.39	Molybdopterin synthase sulfur carrier subunit OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1ICY6	9.7e-39	80.39	Molybdopterin synthase sulfur carrier subunit OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Lsi08G000950.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890088.1	8.9e-47	93.14	molybdopterin synthase sulfur carrier subunit isoform X2 [Benincasa hispida] >XP...	[more]
XP_038890087.1	8.9e-47	93.14	molybdopterin synthase sulfur carrier subunit isoform X1 [Benincasa hispida]	[more]
XP_008459590.1	5.1e-42	89.90	PREDICTED: molybdopterin synthase sulfur carrier subunit [Cucumis melo] >XP_0169...	[more]
KAA0039285.1	1.2e-40	89.69	molybdopterin synthase sulfur carrier subunit [Cucumis melo var. makuwa] >TYK004...	[more]
XP_004141543.1	2.1e-40	86.87	molybdopterin synthase sulfur carrier subunit [Cucumis sativus] >XP_031741905.1 ...	[more]

BLAST of Lsi08G000950.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10100.1	3.8e-27	67.90	co-factor for nitrate, reductase and xanthine dehydrogenase 7	[more]
AT4G10100.2	3.8e-27	67.90	co-factor for nitrate, reductase and xanthine dehydrogenase 7	[more]
AT4G10100.3	3.8e-27	67.90	co-factor for nitrate, reductase and xanthine dehydrogenase 7	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	TIGRFAM	TIGR01682	TIGR01682	coord: 24..102 e-value: 1.5E-21 score: 75.0
None	No IPR available	CDD	cd00754	Ubl_MoaD	coord: 24..102 e-value: 1.79773E-31 score: 103.812
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 22..102 e-value: 1.4E-20 score: 75.9
IPR003749	Sulfur carrier ThiS/MoaD-like	PFAM	PF02597	ThiS	coord: 27..102 e-value: 5.4E-15 score: 55.8
IPR044672	Molybdopterin synthase sulfur carrier subunit	PANTHER	PTHR33359	MOLYBDOPTERIN SYNTHASE SULFUR CARRIER SUBUNIT	coord: 20..102
IPR028887	Molybdopterin synthase sulfur carrier subunit, eukaryote	HAMAP	MF_03051	MOCS2A	coord: 23..102 score: 25.218536
IPR016155	Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp	SUPERFAMILY	54285	MoaD/ThiS	coord: 23..100

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi08G000950	Lsi08G000950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi08G000950.1.exon.1	Lsi08G000950.1.exon.1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi08G000950.1.three_prime_UTR.1	Lsi08G000950.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi08G000950.1.CDS.1	Lsi08G000950.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi08G000950.1	Lsi08G000950.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006777	Mo-molybdopterin cofactor biosynthetic process
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0018315	molybdenum incorporation into molybdenum-molybdopterin complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0019008	molybdopterin synthase complex
molecular_function	GO:0030366	molybdopterin synthase activity
molecular_function	GO:0000166	nucleotide binding