Lsi08G000950 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGAGAAGATGGATTTGGATCTGCAGACAGGTCAGGTGGGGAAAAAGTAGAACAACTGGTTCAAATCAAGGCCTTGTTTTTTGCTAGAGCTCGAGATCTTACGGGCATGAATGACATTTTATTGGAGATCCCTTCAGGTAGTACTACCAAGGATTGTCTGGACAAGATTGTAGGCAAATTTCCAAGGCTAGGAGAGATCCTTGGATGTGTGGTTCTGGCTCTGAATGAGGATTATACAACTGAGTCAACAATTGTTAAAGATAAAGATGAGTTGGCAATTATTCCTCCCATAAGTGGTGGCTAACCTTTCTTCTGCTACCATTTTATAGTGATATGTATACATATTTTTCCTTTTGGTGCCTTTTCAAATGTGGAACTTAATAAGTTAATGTGGCCATTGAGATTCTTTGCCAATTCTGTAGAAAATTACTTGTATAATATGTATGTATGTTTTTCTTTGGGATACAATATTCTCATTCAAACTCAATATAGAAATGAGAGCTCAAACATTTCAATCAA ATGAAAGGAGAAGATGGATTTGGATCTGCAGACAGGTCAGGTGGGGAAAAAGTAGAACAACTGGTTCAAATCAAGGCCTTGTTTTTTGCTAGAGCTCGAGATCTTACGGGCATGAATGACATTTTATTGGAGATCCCTTCAGGTAGTACTACCAAGGATTGTCTGGACAAGATTGTAGGCAAATTTCCAAGGCTAGGAGAGATCCTTGGATGTGTGGTTCTGGCTCTGAATGAGGATTATACAACTGAGTCAACAATTGTTAAAGATAAAGATGAGTTGGCAATTATTCCTCCCATAAGTGGTGGCTAACCTTTCTTCTGCTACCATTTTATAGTGATATGTATACATATTTTTCCTTTTGGTGCCTTTTCAAATGTGGAACTTAATAAGTTAATGTGGCCATTGAGATTCTTTGCCAATTCTGTAGAAAATTACTTGTATAATATGTATGTATGTTTTTCTTTGGGATACAATATTCTCATTCAAACTCAATATAGAAATGAGAGCTCAAACATTTCAATCAA ATGAAAGGAGAAGATGGATTTGGATCTGCAGACAGGTCAGGTGGGGAAAAAGTAGAACAACTGGTTCAAATCAAGGCCTTGTTTTTTGCTAGAGCTCGAGATCTTACGGGCATGAATGACATTTTATTGGAGATCCCTTCAGGTAGTACTACCAAGGATTGTCTGGACAAGATTGTAGGCAAATTTCCAAGGCTAGGAGAGATCCTTGGATGTGTGGTTCTGGCTCTGAATGAGGATTATACAACTGAGTCAACAATTGTTAAAGATAAAGATGAGTTGGCAATTATTCCTCCCATAAGTGGTGGCTAA MKGEDGFGSADRSGGEKVEQLVQIKALFFARARDLTGMNDILLEIPSGSTTKDCLDKIVGKFPRLGEILGCVVLALNEDYTTESTIVKDKDELAIIPPISGG Homology
BLAST of Lsi08G000950 vs. ExPASy Swiss-Prot
Match: Q9S7A3 (Molybdopterin synthase sulfur carrier subunit OS=Arabidopsis thaliana OX=3702 GN=At4g10100 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 5.3e-26 Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lsi08G000950 vs. ExPASy Swiss-Prot
Match: B6SXF8 (Molybdopterin synthase sulfur carrier subunit OS=Zea mays OX=4577 GN=VP15 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22 Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of Lsi08G000950 vs. ExPASy Swiss-Prot
Match: A2X635 (Molybdopterin synthase sulfur carrier subunit OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07667 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22 Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = 0
BLAST of Lsi08G000950 vs. ExPASy Swiss-Prot
Match: Q6YVX4 (Molybdopterin synthase sulfur carrier subunit OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0558300 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22 Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = 0
BLAST of Lsi08G000950 vs. ExPASy Swiss-Prot
Match: A8JJB2 (Molybdopterin synthase sulfur carrier subunit OS=Chlamydomonas reinhardtii OX=3055 GN=CHLREDRAFT_109356 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.1e-13 Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Lsi08G000950 vs. ExPASy TrEMBL
Match: A0A1S4E2J1 (Molybdopterin synthase sulfur carrier subunit OS=Cucumis melo OX=3656 GN=LOC103498674 PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.5e-42 Identity = 89/99 (89.90%), Postives = 92/99 (92.93%), Query Frame = 0
BLAST of Lsi08G000950 vs. ExPASy TrEMBL
Match: A0A5A7TCZ4 (Molybdopterin synthase sulfur carrier subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00780 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 6.0e-41 Identity = 87/97 (89.69%), Postives = 90/97 (92.78%), Query Frame = 0
BLAST of Lsi08G000950 vs. ExPASy TrEMBL
Match: A0A0A0KSV6 (Molybdopterin synthase sulfur carrier subunit OS=Cucumis sativus OX=3659 GN=Csa_5G649330 PE=3 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40 Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of Lsi08G000950 vs. ExPASy TrEMBL
Match: A0A6J1EWF4 (Molybdopterin synthase sulfur carrier subunit OS=Cucurbita moschata OX=3662 GN=LOC111438870 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.7e-39 Identity = 82/102 (80.39%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of Lsi08G000950 vs. ExPASy TrEMBL
Match: A0A6J1ICY6 (Molybdopterin synthase sulfur carrier subunit OS=Cucurbita maxima OX=3661 GN=LOC111471951 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 9.7e-39 Identity = 82/102 (80.39%), Postives = 91/102 (89.22%), Query Frame = 0
BLAST of Lsi08G000950 vs. NCBI nr
Match: XP_038890088.1 (molybdopterin synthase sulfur carrier subunit isoform X2 [Benincasa hispida] >XP_038890089.1 molybdopterin synthase sulfur carrier subunit isoform X2 [Benincasa hispida]) HSP 1 Score: 196.8 bits (499), Expect = 8.9e-47 Identity = 95/102 (93.14%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Lsi08G000950 vs. NCBI nr
Match: XP_038890087.1 (molybdopterin synthase sulfur carrier subunit isoform X1 [Benincasa hispida]) HSP 1 Score: 196.8 bits (499), Expect = 8.9e-47 Identity = 95/102 (93.14%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Lsi08G000950 vs. NCBI nr
Match: XP_008459590.1 (PREDICTED: molybdopterin synthase sulfur carrier subunit [Cucumis melo] >XP_016902442.1 PREDICTED: molybdopterin synthase sulfur carrier subunit [Cucumis melo]) HSP 1 Score: 181.0 bits (458), Expect = 5.1e-42 Identity = 89/99 (89.90%), Postives = 92/99 (92.93%), Query Frame = 0
BLAST of Lsi08G000950 vs. NCBI nr
Match: KAA0039285.1 (molybdopterin synthase sulfur carrier subunit [Cucumis melo var. makuwa] >TYK00470.1 molybdopterin synthase sulfur carrier subunit [Cucumis melo var. makuwa]) HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40 Identity = 87/97 (89.69%), Postives = 90/97 (92.78%), Query Frame = 0
BLAST of Lsi08G000950 vs. NCBI nr
Match: XP_004141543.1 (molybdopterin synthase sulfur carrier subunit [Cucumis sativus] >XP_031741905.1 molybdopterin synthase sulfur carrier subunit [Cucumis sativus] >XP_031741906.1 molybdopterin synthase sulfur carrier subunit [Cucumis sativus] >KGN52663.1 hypothetical protein Csa_009162 [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 2.1e-40 Identity = 86/99 (86.87%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of Lsi08G000950 vs. TAIR 10
Match: AT4G10100.1 (co-factor for nitrate, reductase and xanthine dehydrogenase 7 ) HSP 1 Score: 118.2 bits (295), Expect = 3.8e-27 Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lsi08G000950 vs. TAIR 10
Match: AT4G10100.2 (co-factor for nitrate, reductase and xanthine dehydrogenase 7 ) HSP 1 Score: 118.2 bits (295), Expect = 3.8e-27 Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lsi08G000950 vs. TAIR 10
Match: AT4G10100.3 (co-factor for nitrate, reductase and xanthine dehydrogenase 7 ) HSP 1 Score: 118.2 bits (295), Expect = 3.8e-27 Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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