Lsi06G004370.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G004370.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	serrate RNA effector molecule
Location	chr06: 4768761 .. 4776405 (-)
Sequence length	2991
RNA-Seq Expression	Lsi06G004370.1
Synteny	Lsi06G004370.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAGATCAGTGAATGAAACTCCGGACTTTCTCGACCTCACTTCTCCGACGCTTTGGTTTCGTTTTAGGGTTTCATTTCTTCTTCATCTTCTTCAATTGCTGTGTAAAATCATGGCCGAGGTTATGAACATGGCCGCCGCCGCCGACGAGTCCTTGGACCGCCGTCGTGATCGTCAAGAGAAATCGTCTGAGGAGCAACCTCATTCCTCGCCGCCGCCGCCGCCAGCTGGTGCTCCTCCTCCTCCCTCTAGAAGAAGGGATAGAGATGAGAGAGATAGGAGAGATGACCGGGATATTGATCGTCCTCCGAATCGACGCGGTGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGAGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGTAGACACTCGCCTCCCAGACGGTCTCCTCCTCCACCTTACAAGCGTTCCAGGAGGGATGATGGTGGATATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTGAGTGGGTGTGAAACTGTTTTGATTTGTCGAGCTTGATTGTTGTTCTGAAGATTTGGAGCTGAGTTCCCTGCATTTGAAATTAAAATGGCATTCACGGATTCTAGAGTCGATTTTCATTTAAATGATAAGATTTTTCTTGCTAATTCTGGGTTGTGGGATTCTAATTTTTCCATAAAACCATAACTAGGTCCGCCAAACTTGGCATTGCCACTAAAAACTTCTAAGGTCCTATGTTTGAACCATTAACTGATGCTGGAAGCCATTTTGAACATAAAATTTGAACTCAACAAGCACCTTTTCCGTGAGACAAATAATGTTTCACACATAGCCTTTAAAATAAATGGTTCCTCCCATTTCGTTTGAGACAAAATCGTTCATCTCATTTTTTATTTTAATGGTTCAACCCATTTAACATACAAATAGATATCTAGGGGATGAACCATTTCATAAAGGAATAATGTTTATCCTATATTTGTTTGCTCTGTTTGTTGGACATAGTTGTTGAAGGTCTTCTATGTTTTTCTTAATGGTCTCAACGGTCAGAGATGCTACTTCACGTGTATTGTATTTTCTCAATCCCCATCATCTCTTTACCCCCTAATCCCTCCCCTAATATAAGAGCGTGACGTTTGAGTTAATGCCCTCAGTTGTACTTTCTATTACAATGGACACCTCTGCTCACTTTTTTGATGCTTCCTAGTCAATGTTCATCTTCTATTTGTGCTCCCGGTACTTTTTAAGTGACTATCGTGTTTTGTGGATTTGTTTCTGATTTTTTTCTCTTGAATAATTGGGTTTATTTCGTGCTTTGAGTTCTTAATCAAAGTTATTTTTCCCTTAAAAAACCGGTTTCTCGTATTATGATTGTGGGAATAGCATTTCTGTTGACTAATGCTTAGAGGCTGTCATTTAAGTATTGATATGTTTTATTAATTTATCTATCTACTTTATCTTATCCCAAGGTTTGGCTATGATTATGGTGGGGGATATGAGCGGGAAATGCGAGGCCGGCCTGGATATGTTGATGAAAGACCTCCAGGTCGATACATTGGTCGTTCATCCGGTGGCTATCAAGGTGGTGTTTCTATTAACTGATAAAATAAACTCAAGCCTTTTCATGACTTTGGTGTATACTTATACAAACCGAGTCTATTTCATTTTTTTCAGATATTGTTATCGAACATGAAATACTTAAATTTCAATTATGTCAATGGGAAACTTTGAGTTTTCACCTTGTTCTTTGTTGAAAATGCAAAAATATTCATTGGTTTGGAAAATGAGATATTGTATAGTGTTTGTATTCGGCCAATATCAGCCCTTTTAGCCAATTTATAGAGAAGAGTTTTTCTCATTTTCTTTTCTGATGCAGGATTATGCCAGACTAATTTAATTATTAAAGAGAGATTTTTTAATGGCTTTGTCTTTTTCCCTCTTGTCTAAATGTGATATCATTCTTATGCCCCCTTTGGTATATAAATTTAAGCAATTAGTAATGCTATACTGGCAGAATAACATTTTATTTGTCAATACATTTCCATGCAATGGTTTTTAGAGTCCTATAGCTCCCTATGTTTGTGAGCCAAACTGTATAAAGTATATATAAGGGATCTTTAGTTTATTCATATCTGTAAAGTTCAGTATAAATCTGGAAATTCGCATGTTGAGACCTTTTGACATCGAGTACTATTTGTGGCTTTTGAATTAGAACTGCAGCATCTCCTTGCTTCCTAGCTCTCAATTGTGCATCTGTTGTATGAATACGATTACCAGTTTCTCTTTTTCAGTGTTTTTCAGTGTTTAACAGCTGTAGAAATGTTTCCAGAAAAAAAATGTATGTCTCTGGTAGTGGTGAACATTTTGTTTGAATTGATGCTTAGATCTGGATGATCAATGTTATGGATAAGATACTCCCAATCGATTTTCTTATTTTTTTTAAGCTGTGTTCTGCAGACTGGGATTCTAGTCGTGGTGGGCATGGTGATGCACTCAATGCAGGAGGTGGCCAAAGGTTAGCATTCAGTCACAACTCTTTTGTTGTCTTTATACATAATTGATATTGTTCTGTGATATCTCTCTGAATATGCGTGCCTTGGGTTATTGTGTTAGTTTCTGTATGAATATGTGATTTATTTTCTATGCTGCATGAGATATCATGGGCAAATCATGACTAAGCCAGCAGGGTAGGTCTGAAATTGAACTATAATAACAATGAAACAAACAGCCAATGCTTATTGAAAACTGCAAAGGGTGGATTGTCAATGGCTGAATTTCTATTGAAAGTGAATTTGCTCTTGGAAAGGGAAAATGCTGGGTGTTTCCTTTCTGTAGCTGTATGGTAGAAAATATATATTTTCCTCTGCCCTTTCTAATTATGTCGTTTCCAAGTTATGCAACCATGTTTTTGGGTTATTTCTTCTCTCCAGTGATGGGCGGTTATGCTAAACTATTTTGGCCTTTTGGTGGTTTTTATTCAGCATATAAAGCACTTTGTCCTCCAATGTTTGTGGTTCCTTTCGAATTTGAAGTGCTGATTTTGCGACTAATGTTATGTTATTAATGCCTGATCGTCTCTGCTTTGTTATGGCTCTTATTGAAAAATGTGGAAACTATACTTTCCCCTTAATTTGTAGGTTGAACTCTCAAATTTGTTGAGTAGGATTAGGAGTCATTGGAACCATACAAGTTGTATTGAAATTGAACTAAATAATATCACTTAAAGCGTCAAACTGTCAACGTTGATAATTATCTAACAAATAGAAAAAAGTTTTGAAACTTGTGGCTTAAACTGGGCCTCTCCAAATTTCCAGCATTGTCTTGCTTTGTCTCATAATTTTATTGGATTGCGTGATCTAACTTTATCCTTTTAACTTTATTTTCAATGCAATGTTGATAATATGTGATTTCAGAGAAGGCTTGATGACATACAAGCAATTTATTCAAGAACTTGAAGATGATATACTGCCTGCTGAAGCTGAGCGCAGGTATGTTCTAAATGTGCTTTTGATTTTTTTGATCTAATTATATGAGTTTAGTTCTTTTTAGTTTTGTGGAACAACTTCGTTCTTTATTTCAGATATCAAGAATACAAGTCAGAGTATATTACAACACAGAAACAAGCCTTTTTTGATTCTCATAAGGATGAAGAATGGTACTTCTTGTCTTTTACATCTGAATTTCCTTTCTTTTTGCTATTTCCCCTAATTCATCTCTTTTGTCTATTTAGGTTGAGAGACAAATATCATCCGACCAACCTAGTTACTGTCATTGAAAGGTGTTTTTCTGACCGTCTTCCCCAAAAAATGGAGATTCTTATAGTTGTGGTTAATTTCTTCACATTTTTTTCATCTTTAACAAGTGGACATGAAATTGGCCATTTTATCCTTTTTTTAATTTGATATTTTCTTTCTTATTATATATATATTTTTTTCATTTTTTTAAATATTGTGGTTTATTCTAATATTTGGATGATGTGTTAAGGAGGAATGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGAATTGTAAGATTGGACTTCCCACAATTATGTTTGGATTCAGAAAATTTCAACTGTGATGGTAAACCAATGCTGTTCTATTCTATGATGCAGAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGGCTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCAAAAGAAATGGATCTTATTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACAAAGACGAATCCAGATTGACATTGAACAAGCTCAAGCGCTTGTCCGTAAACTTGATTCCGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGATAGTGACAAACTAGGTCGGGAAAAAGCACATGGTGGCTCTTCTGGTCCAGTCATAATCATACGGGGGCTGACAACTGTGAAAGGCTTGGAGGGTGTTGAGCTATTGGACACACTTCTCACATATCTGTGGCGCATCCATGGTCTAGATTACTATGGAATGGTCGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAACTCTAACATGGCTGTTGGTGCTGATGAGTGGGAGAAGAAACTTGACTTGCGCTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGAATCTTTTGATCCATATGTTCGCAAGATAAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCCCCTGAGTTTGTACATAAGCATCTTAACTTGAAACATCCCGAGCTTGTGATGGAACTGACTTCAAAAGTGCGTGAGGAGCTGTATTTCCAAAATTACATGAAGTAAGTGAAATTTCTGACAGCAATTCTTTCTCACTCTTGATGGAAGATGTCATGTCATTGACTTATACCTTAATTCTTCACAGTGATGCAGATGCTCCTGGAGGGACGCCTGTTATGCAACAATCACTTCCGGTATGTTTATTATGTATGCATTGGCTGTGACCACATATTAGATGCCAACGAATAGTAAACTTTCCTTTGTTGGATCGGTAGTTTTCATGCCTCATCACCACAGAACTGCTGTATTGCCTGTGACAACATATTAGATAACAACAGATAGTAAATTTTCCTTTGTTGGATCGGGAGTTTTGATTTCCCATTGCCACAGAACTGCCCCTCTCAAAGAATAACAAGAAAAAAAAACCCTATTACACACAAACAGAAGAATAATAGGATCAGTTTTTCCCCAAGTTAGGTGTGTGTAAATTGGAATCCCCTCTTTTATTGAATAATGTAATAAAAATTATTACACACACAAACGTACATAAAGGACGGTAGAATGGTTGGTTAGTGTTAATGTTATCCACAATTATTATCTATAACATGGTATAAGAACATATTTTTCATTCCATTTTGTTGGGTAATTGTTGTTTTCGTCATCATACCATTCTAATGGGTCATTTTTCATTAACGAGGATCTGAGGTGTATTCCTATAGGTTTTTGGTATGCCTAGTTTGTAGTGTGGGAAGTGTCATTTTTTGGACTGACAATGTAAATATGTGCAGTCTAGCAATATTTTAGGCATAGAATCGGTTTTTCTTTTTGGCTTTCCTTTCCTTTTCTTTTTAATCCATCAAGAGACAATTTTCTTATGCAGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGACAGAGGCAATCGCAGGGACCGCGATAATTGGGCTAATGGGGGTGACAGATTTGATAGATCGGAGAACCCACAATCAAGTGATTTCCAATCAGCAAATGATGGTACGGATGGTGGAAACATTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGAAGACATGTTGCTCCTTTTGCCTCTGAAATACCACCGCCAGTGCTTATGCCCGTTCCTGGTGCTGGGTATGTTTGCTTAACTGCTTAGCATTTTTGTGCCCTTTGCGTTCATGGTGATCTTACATGTTATGTTTTCTCGCAGTCCATTAGGACCTTTTGTCCCTGCTCCGCCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGCCCCCCTCCTTTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGAGCTCAATTAGGTGGATCTGCTCCAATCCTTGCTTTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGGTATAACTGCTGTAGATTTTAGCTACTGATATGGTTCTTTTTACCCTTTTTGTAATGTTGCTTTCATAGACCTTCCTTCTTGTATCAGCCTATCAGGTACAGTAGACCGTCTAGGCAGATTAATCTAAATTTCTATATGCAGCTCATAAAAGTCAACTTGAAAACAATACCCATACCCTTGTGGATAAAAAAAATGTGAAAGAATATAGTGGGATCTATATTTTTAGTGGTGAGGGATTAGTAAAGTTTTTGGTTCCCTTGCTGCAAGCCATGTTCTTTGTCCTGATCTGGAATCAGGATACAGTAACAATATAACTCCTGAACCTTTAGCGTTTTATATAACTAGATATAGAAATCAAGCGATCACCTGACACATTTCTCCAACATATACTTCGATGCTTCTTGGTATAGATTTATTTGTAGGGTCACTCTGCAGCCAGAGAAGTTTTTCTTAATGAGGTATTTACTAATAGCAAAATATCATGCAGTTATCAAGACCTAGACGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAGATATATTTGGCATCAGCAAAGTTTAGAGGCCCATTCGTGTTTTTAAGAAGTGGGGATGCAACTCCAAAACTGGTACGAATTCAGACTGGTCACTGCTTGAAATTCTTCATGTTGCTGAAGAAGTTTCCTTTGTTTCACCCCATAGAGTAAGAACTGAACTTTGAGTTGATCACATTCTGGCTGTGGGCAAGTACAAATACCTTCTTGAGAATTGTGCATTCATTTAACTTTTAACTTTTTCCTCCCTACTCTCTGTATTCTTGGTGAAGAAGGAATTCGACCCGAAGGCAAGAGATTTAATGATCGAAAAATTTCCCATCTTTCGAATTGTAGAACTTAAATTCTTCTTAAGATAGGAGTGTGCATTCCCTTTAGTTTTATTTTATTTTTACTAATAGTCGATTTTGGTCAAGCAAGAACTAGTAATAAAATTGTGGATATTAAAACTTGTTTTATGAACCTTCTTTCTAACAGTAAAGATTATGTAATGTTAGGATGCTCCATTGTTATATTTTAGAGAATATCCAGTTCCCAGGAAGCCTCCCATTTGACATGTTTGAGTAGAATGGAAATTTGTTCTATAGTACTCTATGTTCCATTATGAAGTTGTTTCAGGTTGTGCTTAAATTTTTTTTTTTTTCAGATGGTCACTAAGTGGTAGAAACTTAGGTGGATTTGTCTTCTTTTTCTTTTTTTCCCCTTCTCTTCCCCTTTGAAATTGTTAATTAATGCCAATGGTCTTGT

mRNA sequence

GTCAGATCAGTGAATGAAACTCCGGACTTTCTCGACCTCACTTCTCCGACGCTTTGGTTTCGTTTTAGGGTTTCATTTCTTCTTCATCTTCTTCAATTGCTGTGTAAAATCATGGCCGAGGTTATGAACATGGCCGCCGCCGCCGACGAGTCCTTGGACCGCCGTCGTGATCGTCAAGAGAAATCGTCTGAGGAGCAACCTCATTCCTCGCCGCCGCCGCCGCCAGCTGGTGCTCCTCCTCCTCCCTCTAGAAGAAGGGATAGAGATGAGAGAGATAGGAGAGATGACCGGGATATTGATCGTCCTCCGAATCGACGCGGTGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGAGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGTAGACACTCGCCTCCCAGACGGTCTCCTCCTCCACCTTACAAGCGTTCCAGGAGGGATGATGGTGGATATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGCTATGATTATGGTGGGGGATATGAGCGGGAAATGCGAGGCCGGCCTGGATATGTTGATGAAAGACCTCCAGGTCGATACATTGGTCGTTCATCCGGTGGCTATCAAGACTGGGATTCTAGTCGTGGTGGGCATGGTGATGCACTCAATGCAGGAGGTGGCCAAAGATATCAAGAATACAAGTCAGAGTATATTACAACACAGAAACAAGCCTTTTTTGATTCTCATAAGGATGAAGAATGGAGGAATGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGAATTAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGGCTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCAAAAGAAATGGATCTTATTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACAAAGACGAATCCAGATTGACATTGAACAAGCTCAAGCGCTTGTCCGTAAACTTGATTCCGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGATAGTGACAAACTAGGTCGGGAAAAAGCACATGGTGGCTCTTCTGGTCCAGTCATAATCATACGGGGGCTGACAACTGTGAAAGGCTTGGAGGGTGTTGAGCTATTGGACACACTTCTCACATATCTGTGGCGCATCCATGGTCTAGATTACTATGGAATGGTCGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAACTCTAACATGGCTGTTGGTGCTGATGAGTGGGAGAAGAAACTTGACTTGCGCTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGAATCTTTTGATCCATATGTTCGCAAGATAAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCCCCTGAGTTTGTACATAAGCATCTTAACTTGAAACATCCCGAGCTTGTGATGGAACTGACTTCAAAAGTGCGTGAGGAGCTGTATTTCCAAAATTACATGAATGATGCAGATGCTCCTGGAGGGACGCCTGTTATGCAACAATCACTTCCGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGACAGAGGCAATCGCAGGGACCGCGATAATTGGGCTAATGGGGGTGACAGATTTGATAGATCGGAGAACCCACAATCAAGTGATTTCCAATCAGCAAATGATGGTACGGATGGTGGAAACATTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGAAGACATGTTGCTCCTTTTGCCTCTGAAATACCACCGCCAGTGCTTATGCCCGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCGCCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGCCCCCCTCCTTTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGAGCTCAATTAGGTGGATCTGCTCCAATCCTTGCTTTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGACGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAGATATATTTGGCATCAGCAAAGTTTAGAGGCCCATTCGTGTTTTTAAGAAGTGGGGATGCAACTCCAAAACTGGTACGAATTCAGACTGGTCACTGCTTGAAATTCTTCATGTTGCTGAAGAAGTTTCCTTTGTTTCACCCCATAGAGTAAGAACTGAACTTTGAGTTGATCACATTCTGGCTGTGGGCAAGTACAAATACCTTCTTGAGAATTGTGCATTCATTTAACTTTTAACTTTTTCCTCCCTACTCTCTGTATTCTTGGTGAAGAAGGAATTCGACCCGAAGGCAAGAGATTTAATGATCGAAAAATTTCCCATCTTTCGAATTGTAGAACTTAAATTCTTCTTAAGATAGGAGTGTGCATTCCCTTTAGTTTTATTTTATTTTTACTAATAGTCGATTTTGGTCAAGCAAGAACTAGTAATAAAATTGTGGATATTAAAACTTGTTTTATGAACCTTCTTTCTAACAGTAAAGATTATGTAATGTTAGGATGCTCCATTGTTATATTTTAGAGAATATCCAGTTCCCAGGAAGCCTCCCATTTGACATGTTTGAGTAGAATGGAAATTTGTTCTATAGTACTCTATGTTCCATTATGAAGTTGTTTCAGGTTGTGCTTAAATTTTTTTTTTTTTCAGATGGTCACTAAGTGGTAGAAACTTAGGTGGATTTGTCTTCTTTTTCTTTTTTTCCCCTTCTCTTCCCCTTTGAAATTGTTAATTAATGCCAATGGTCTTGT

Coding sequence (CDS)

ATGGCCGAGGTTATGAACATGGCCGCCGCCGCCGACGAGTCCTTGGACCGCCGTCGTGATCGTCAAGAGAAATCGTCTGAGGAGCAACCTCATTCCTCGCCGCCGCCGCCGCCAGCTGGTGCTCCTCCTCCTCCCTCTAGAAGAAGGGATAGAGATGAGAGAGATAGGAGAGATGACCGGGATATTGATCGTCCTCCGAATCGACGCGGTGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGAGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGTAGACACTCGCCTCCCAGACGGTCTCCTCCTCCACCTTACAAGCGTTCCAGGAGGGATGATGGTGGATATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGCTATGATTATGGTGGGGGATATGAGCGGGAAATGCGAGGCCGGCCTGGATATGTTGATGAAAGACCTCCAGGTCGATACATTGGTCGTTCATCCGGTGGCTATCAAGACTGGGATTCTAGTCGTGGTGGGCATGGTGATGCACTCAATGCAGGAGGTGGCCAAAGATATCAAGAATACAAGTCAGAGTATATTACAACACAGAAACAAGCCTTTTTTGATTCTCATAAGGATGAAGAATGGAGGAATGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGAATTAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGGCTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCAAAAGAAATGGATCTTATTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACAAAGACGAATCCAGATTGACATTGAACAAGCTCAAGCGCTTGTCCGTAAACTTGATTCCGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGATAGTGACAAACTAGGTCGGGAAAAAGCACATGGTGGCTCTTCTGGTCCAGTCATAATCATACGGGGGCTGACAACTGTGAAAGGCTTGGAGGGTGTTGAGCTATTGGACACACTTCTCACATATCTGTGGCGCATCCATGGTCTAGATTACTATGGAATGGTCGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAACTCTAACATGGCTGTTGGTGCTGATGAGTGGGAGAAGAAACTTGACTTGCGCTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGAATCTTTTGATCCATATGTTCGCAAGATAAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCCCCTGAGTTTGTACATAAGCATCTTAACTTGAAACATCCCGAGCTTGTGATGGAACTGACTTCAAAAGTGCGTGAGGAGCTGTATTTCCAAAATTACATGAATGATGCAGATGCTCCTGGAGGGACGCCTGTTATGCAACAATCACTTCCGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGACAGAGGCAATCGCAGGGACCGCGATAATTGGGCTAATGGGGGTGACAGATTTGATAGATCGGAGAACCCACAATCAAGTGATTTCCAATCAGCAAATGATGGTACGGATGGTGGAAACATTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGAAGACATGTTGCTCCTTTTGCCTCTGAAATACCACCGCCAGTGCTTATGCCCGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCGCCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGCCCCCCTCCTTTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGAGCTCAATTAGGTGGATCTGCTCCAATCCTTGCTTTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGACGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAG

Protein sequence

MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDRDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPPPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIGRSSGGYQDWDSSRGGHGDALNAGGGQRYQEYKSEYITTQKQAFFDSHKDEEWRNELAQRTAKDFLLDLQSGTLELGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILALSSGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL

Homology

[Close]

BLAST of Lsi06G004370.1 vs. ExPASy Swiss-Prot
Match: Q9ZVD0 (Serrate RNA effector molecule OS=Arabidopsis thaliana OX=3702 GN=SE PE=1 SV=2)

HSP 1 Score: 820.8 bits (2119), Expect = 1.2e-236
Identity = 476/756 (62.96%), Postives = 549/756 (72.62%), Query Frame = 0


Query: 11  ADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSR----------RRDRDERDRRDDR 70
           AD +L        +  E+   SSPPPPP  +  P             RR+RD R+RRD+R
Sbjct: 2   ADVNLPPSDSVDNRLPEKSTSSSPPPPPPSSSLPQQEQEQDQQQLPLRRERDSRERRDER 61

Query: 71  DIDR-PPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSP 130
           DI+R PPNRR    +R+RSP   PPR       RDYKRR SLSPPPPYRDRRHSPP+R  
Sbjct: 62  DIERPPPNRR----ERDRSPLP-PPR-------RDYKRRPSLSPPPPYRDRRHSPPQRR- 121

Query: 131 PPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYI 190
            PP KR RRDD GYDGR+GSPRGG+GP DRRFGYD+GGGY+REM GRPGY DERP GR++
Sbjct: 122 SPPQKRYRRDDNGYDGRRGSPRGGYGPPDRRFGYDHGGGYDREMGGRPGYGDERPHGRFM 181

Query: 191 GRSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSE 250
           GR    YQDW+  RGG+GDA N+G  Q                         RYQEYKSE
Sbjct: 182 GR----YQDWEGGRGGYGDASNSGNPQRDGLMSYKQFIQELEDDILPSEAERRYQEYKSE 241

Query: 251 YITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPG 310
           YITTQK+AFF++HK+E+W                RN+LAQ+ AKDFLLDLQSGTL+LGP 
Sbjct: 242 YITTQKRAFFNTHKEEDWLKNKYHPTNLLSVIERRNDLAQKVAKDFLLDLQSGTLDLGPA 301

Query: 311 INAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQID 370
           +   A NKSG+ SEPNS+DEA   GKR+RHG G AKE +L+SAAPKA   +S+ +RI  D
Sbjct: 302 V--TALNKSGRTSEPNSEDEAAGVGKRKRHGMGGAKENELLSAAPKAPSFTSDPKRILTD 361

Query: 371 IEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVEL 430
           +EQ QALVRKLDSEK IEEN+L GS+++K GREK H GS+GPV+IIRGLT+VKGLEGVEL
Sbjct: 362 VEQTQALVRKLDSEKKIEENVLQGSETEKSGREKLHSGSTGPVVIIRGLTSVKGLEGVEL 421

Query: 431 LDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLR 490
           LDTL+TYLWR+HGLDYYG VET EAKGLRHVR EGK S+     DE E K D  WQERL+
Sbjct: 422 LDTLVTYLWRVHGLDYYGKVETNEAKGLRHVRAEGKVSD--AKGDENESKFDSHWQERLK 481

Query: 491 GQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLN 550
           GQD LEVM AK+KI+AAA E+ DP+VRKIRDEKYGWKYGCGAKGCTKLFHA EFV+KHL 
Sbjct: 482 GQDPLEVMAAKEKIDAAATEALDPHVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLK 541

Query: 551 LKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDR 610
           LKH ELV ELT+KVREELYFQNYMND +APGG P  QQS P+D+P RR+ +++ RL+DDR
Sbjct: 542 LKHTELVTELTTKVREELYFQNYMNDPNAPGGQPATQQSGPRDRPIRRKPSMENRLRDDR 601

Query: 611 GNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGR-HVAPFAS 670
           G RR+RD  ANG DR DRSE+ Q  D        DGGN  +  +D FGGQG  HV PF S
Sbjct: 602 GGRRERDGRANGNDRNDRSEDQQRGD-------NDGGNPGEVGYDAFGGQGGVHVPPFLS 661

Query: 671 EI-PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP-PPFEGGGRNGRPGAQLGGSAP 712
           +I PPP+LMPVPGAGPLGPFVPAPPEVAM+M R+  GP PPFEG GR        GG AP
Sbjct: 662 DINPPPMLMPVPGAGPLGPFVPAPPEVAMQMFRDPSGPNPPFEGSGR--------GGPAP 720

[Close]

BLAST of Lsi06G004370.1 vs. ExPASy Swiss-Prot
Match: A4IFB1 (Serrate RNA effector molecule homolog OS=Bos taurus OX=9913 GN=SRRT PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.9e-06
Identity = 104/401 (25.94%), Postives = 144/401 (35.91%), Query Frame = 0


Query: 329 LDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWR 388
           L  E   EE  L GS       E    G+   + + R    +K      +LD LL YL  
Sbjct: 565 LIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVERDEKLIK------VLDKLLLYLRI 624

Query: 389 IHGLDYYGMVETREAK------GLRHVREEGKNSNMAVG-ADEWEKKLDLRWQERLRGQD 448
           +H LDYY   E           G+ HVR     + ++ G   EW+K     ++E+L    
Sbjct: 625 VHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQK----TFEEKL--TP 684

Query: 449 LLEVMTAKDKIEAAALESFDP------YVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHK 508
           LL V  +  + EA  +   DP      +V     E    K+ C   G  K F  PEFV K
Sbjct: 685 LLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFKGPEFVRK 744

Query: 509 HLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLK 568
           H+  KH E + E+    +E  +F N++ DA  P        +LP+ KP +          
Sbjct: 745 HIFNKHAEKIEEVK---KEVAFFNNFLTDAKRP--------ALPEIKPAQ---------- 804

Query: 569 DDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPF 628
                                                                     P 
Sbjct: 805 ---------------------------------------------------------PPG 864

Query: 629 ASEIPPPVL---MPVPGAGPLG--PF-VPAPPEV-----AMRMLREQGGPP----PFEGG 688
            ++I PP L   +P P   P G  P+  P PP +     A+R     GGPP    P+ G 
Sbjct: 865 PAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPY-GA 872

Query: 689 GRNGRPGAQLGGSAPILALSSGFRQDPRRIRSYQDLDAPED 702
           GR      +  G  P    +   R DPR I  Y+DLDAP+D
Sbjct: 925 GRGNYDAFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDD 872

[Close]

BLAST of Lsi06G004370.1 vs. ExPASy Swiss-Prot
Match: Q9BXP5 (Serrate RNA effector molecule homolog OS=Homo sapiens OX=9606 GN=SRRT PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.9e-06
Identity = 104/401 (25.94%), Postives = 144/401 (35.91%), Query Frame = 0


Query: 329 LDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWR 388
           L  E   EE  L GS       E    G+   + + R    +K      +LD LL YL  
Sbjct: 565 LIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVERDEKLIK------VLDKLLLYLRI 624

Query: 389 IHGLDYYGMVETREAK------GLRHVREEGKNSNMAVG-ADEWEKKLDLRWQERLRGQD 448
           +H LDYY   E           G+ HVR     + ++ G   EW+K     ++E+L    
Sbjct: 625 VHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQK----TFEEKL--TP 684

Query: 449 LLEVMTAKDKIEAAALESFDP------YVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHK 508
           LL V  +  + EA  +   DP      +V     E    K+ C   G  K F  PEFV K
Sbjct: 685 LLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFKGPEFVRK 744

Query: 509 HLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLK 568
           H+  KH E + E+    +E  +F N++ DA  P        +LP+ KP +          
Sbjct: 745 HIFNKHAEKIEEVK---KEVAFFNNFLTDAKRP--------ALPEIKPAQ---------- 804

Query: 569 DDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPF 628
                                                                     P 
Sbjct: 805 ---------------------------------------------------------PPG 864

Query: 629 ASEIPPPVL---MPVPGAGPLG--PF-VPAPPEV-----AMRMLREQGGPP----PFEGG 688
            ++I PP L   +P P   P G  P+  P PP +     A+R     GGPP    P+ G 
Sbjct: 865 PAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPY-GA 872

Query: 689 GRNGRPGAQLGGSAPILALSSGFRQDPRRIRSYQDLDAPED 702
           GR      +  G  P    +   R DPR I  Y+DLDAP+D
Sbjct: 925 GRGNYDAFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDD 872

[Close]

BLAST of Lsi06G004370.1 vs. ExPASy Swiss-Prot
Match: Q99MR6 (Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.9e-06
Identity = 104/401 (25.94%), Postives = 144/401 (35.91%), Query Frame = 0


Query: 329 LDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWR 388
           L  E   EE  L GS       E    G+   + + R    +K      +LD LL YL  
Sbjct: 564 LIEEVSAEEEELLGSSGGPPPEEPPKEGNPAEINVERDEKLIK------VLDKLLLYLRI 623

Query: 389 IHGLDYYGMVETREAK------GLRHVREEGKNSNMAVG-ADEWEKKLDLRWQERLRGQD 448
           +H LDYY   E           G+ HVR     + ++ G   EW+K     ++E+L    
Sbjct: 624 VHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQK----TFEEKL--TP 683

Query: 449 LLEVMTAKDKIEAAALESFDP------YVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHK 508
           LL V  +  + EA  +   DP      +V     E    K+ C   G  K F  PEFV K
Sbjct: 684 LLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFKGPEFVRK 743

Query: 509 HLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLK 568
           H+  KH E + E+    +E  +F N++ DA  P        +LP+ KP +          
Sbjct: 744 HIFNKHAEKIEEVK---KEVAFFNNFLTDAKRP--------ALPEIKPAQ---------- 803

Query: 569 DDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPF 628
                                                                     P 
Sbjct: 804 ---------------------------------------------------------PPG 863

Query: 629 ASEIPPPVL---MPVPGAGPLG--PF-VPAPPEV-----AMRMLREQGGPP----PFEGG 688
            ++I PP L   +P P   P G  P+  P PP +     A+R     GGPP    P+ G 
Sbjct: 864 PAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPY-GA 871

Query: 689 GRNGRPGAQLGGSAPILALSSGFRQDPRRIRSYQDLDAPED 702
           GR      +  G  P    +   R DPR I  Y+DLDAP+D
Sbjct: 924 GRGNYDAFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDD 871

[Close]

BLAST of Lsi06G004370.1 vs. ExPASy TrEMBL
Match: A0A5D3CEZ5 (Serrate RNA effector molecule OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00360 PE=3 SV=1)

HSP 1 Score: 1323.9 bits (3425), Expect = 0.0e+00
Identity = 689/752 (91.62%), Postives = 699/752 (92.95%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQ+KSS+EQPHSSPP  P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQDKSSDEQPHSSPPSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVD+RP GRYIG
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDDRPLGRYIG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNAGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPGI 300
           ITTQKQAFFDSHKDEEW                RNELAQRTAKDFLLDLQSGTL+LGPGI
Sbjct: 241 ITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGI 300

Query: 301 NAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDI 360
           +AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQIDI
Sbjct: 301 SAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDI 360

Query: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420
            QAQALVRKLDSEKGIEENILSGSDSDKLGR+KAHGGSSGPVIIIRGLTTVKGLEGVELL
Sbjct: 361 GQAQALVRKLDSEKGIEENILSGSDSDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELL 420

Query: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRG 480
           DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLDLRWQERLRG
Sbjct: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMASGADEWEKKLDLRWQERLRG 480

Query: 481 QDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540
           QDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL
Sbjct: 481 QDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540

Query: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600
           KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG
Sbjct: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600

Query: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEI 660
           NRRDRDNWANGGDRFDRSENPQSSDF SANDGTDGGNIDDPMFD+FGGQGRHVAPFASEI
Sbjct: 601 NRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDGGNIDDPMFDSFGGQGRHVAPFASEI 660

Query: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILAL 712
           PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPILAL
Sbjct: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILAL 720

[Close]

BLAST of Lsi06G004370.1 vs. ExPASy TrEMBL
Match: A0A1S3BRT0 (serrate RNA effector molecule OS=Cucumis melo OX=3656 GN=LOC103492466 PE=3 SV=1)

HSP 1 Score: 1323.9 bits (3425), Expect = 0.0e+00
Identity = 689/752 (91.62%), Postives = 699/752 (92.95%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQ+KSS+EQPHSSPP  P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQDKSSDEQPHSSPPSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVD+RP GRYIG
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDDRPLGRYIG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNAGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPGI 300
           ITTQKQAFFDSHKDEEW                RNELAQRTAKDFLLDLQSGTL+LGPGI
Sbjct: 241 ITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGI 300

Query: 301 NAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDI 360
           +AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQIDI
Sbjct: 301 SAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDI 360

Query: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420
            QAQALVRKLDSEKGIEENILSGSDSDKLGR+KAHGGSSGPVIIIRGLTTVKGLEGVELL
Sbjct: 361 GQAQALVRKLDSEKGIEENILSGSDSDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELL 420

Query: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRG 480
           DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLDLRWQERLRG
Sbjct: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMASGADEWEKKLDLRWQERLRG 480

Query: 481 QDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540
           QDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL
Sbjct: 481 QDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540

Query: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600
           KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG
Sbjct: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600

Query: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEI 660
           NRRDRDNWANGGDRFDRSENPQSSDF SANDGTDGGNIDDPMFD+FGGQGRHVAPFASEI
Sbjct: 601 NRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDGGNIDDPMFDSFGGQGRHVAPFASEI 660

Query: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILAL 712
           PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPILAL
Sbjct: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILAL 720

[Close]

BLAST of Lsi06G004370.1 vs. ExPASy TrEMBL
Match: A0A5A7UN10 (Serrate RNA effector molecule OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00340 PE=3 SV=1)

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 688/777 (88.55%), Postives = 699/777 (89.96%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQ+KSS+EQPHSSPP  P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQDKSSDEQPHSSPPSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVD+RP GRYIG
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDDRPLGRYIG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNAGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW-----------------------------------------RN 300
           ITTQKQAFFDSHKDE+W                                         RN
Sbjct: 241 ITTQKQAFFDSHKDEDWYFLSFTSEFSFFLLFPLIHLFCLFRLRDKYHPTNLVTVIERRN 300

Query: 301 ELAQRTAKDFLLDLQSGTLELGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK 360
           ELAQRTAKDFLLDLQSGTL+LGPGI+AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK
Sbjct: 301 ELAQRTAKDFLLDLQSGTLDLGPGISAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK 360

Query: 361 EMDLISAAPKAHPVSSEQRRIQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAH 420
           EMDL+SAAPKAHPVSSE RRIQIDI QAQALVRKLDSEKGIEENILSGSDSDKLGR+KAH
Sbjct: 361 EMDLLSAAPKAHPVSSEPRRIQIDIGQAQALVRKLDSEKGIEENILSGSDSDKLGRDKAH 420

Query: 421 GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK 480
           GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK
Sbjct: 421 GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK 480

Query: 481 NSNMAVGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGW 540
           NSNMA GADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGW
Sbjct: 481 NSNMASGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGW 540

Query: 541 KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM 600
           KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM
Sbjct: 541 KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM 600

Query: 601 QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDG 660
           QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDF SANDGTDG
Sbjct: 601 QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDG 660

Query: 661 GNIDDPMFDTFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP 712
           GNIDDPMFD+FGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP
Sbjct: 661 GNIDDPMFDSFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP 720

[Close]

BLAST of Lsi06G004370.1 vs. ExPASy TrEMBL
Match: A0A6J1HAH6 (serrate RNA effector molecule-like OS=Cucurbita moschata OX=3662 GN=LOC111461600 PE=3 SV=1)

HSP 1 Score: 1289.6 bits (3336), Expect = 0.0e+00
Identity = 673/757 (88.90%), Postives = 691/757 (91.28%), Query Frame = 0


Query: 1   MAEVMNMAAA--ADESLDRRRDRQEKSSEEQPHSSPPPPP--AGAPPPPSRRRDRDERDR 60
           MAEVMNMAAA  ADESLDRRRD+QEKSSEEQPHSSPPP P  A APPPPSRRRDRDERDR
Sbjct: 1   MAEVMNMAAADTADESLDRRRDQQEKSSEEQPHSSPPPQPAAAAAPPPPSRRRDRDERDR 60

Query: 61  RDDRDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPR 120
           RDDRD+DRPPNRR DNYDRNRSPP++PPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPR
Sbjct: 61  RDDRDVDRPPNRRNDNYDRNRSPPTMPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPR 120

Query: 121 RSPPPPYKRSRRDD-GGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPP 180
           RSPPPP+KRSRRDD GGYDGRKGSPRGGFGPGDRRFGYDYGGGYERE+RGRPGYVDER  
Sbjct: 121 RSPPPPFKRSRRDDGGGYDGRKGSPRGGFGPGDRRFGYDYGGGYERELRGRPGYVDERSL 180

Query: 181 GRYIGRSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQE 240
           GRYIGRSSGGYQDWD SRGGHGD LNAG GQ                         RYQE
Sbjct: 181 GRYIGRSSGGYQDWDPSRGGHGDPLNAGAGQREGLMTYKQFIQELEDDILPAEAERRYQE 240

Query: 241 YKSEYITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLE 300
           YKSEYITTQKQ+FFDSHKDEEW                RNELAQRTAKDFL+DLQSGTLE
Sbjct: 241 YKSEYITTQKQSFFDSHKDEEWLKDKYHPTNLVTVIERRNELAQRTAKDFLIDLQSGTLE 300

Query: 301 LGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRR 360
           +GPGINAAATNKSGQ SEPNSDDEADNDGKRRRHGRGPAKEMD +SAAPKAHPVSSE RR
Sbjct: 301 VGPGINAAATNKSGQTSEPNSDDEADNDGKRRRHGRGPAKEMDFLSAAPKAHPVSSEPRR 360

Query: 361 IQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLE 420
           IQIDIEQAQ+LVRKLDSEKGIEENIL GSDSDKLGR++AHGGSSGPVIIIRGLTTVKGLE
Sbjct: 361 IQIDIEQAQSLVRKLDSEKGIEENILCGSDSDKLGRDRAHGGSSGPVIIIRGLTTVKGLE 420

Query: 421 GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQ 480
           GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLD RWQ
Sbjct: 421 GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDSRWQ 480

Query: 481 ERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH 540
           ERLRGQD LE MTAKDKIEAAAL +FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH
Sbjct: 481 ERLRGQDPLETMTAKDKIEAAALGAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH 540

Query: 541 KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRL 600
           KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLD RL
Sbjct: 541 KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDARL 600

Query: 601 KDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAP 660
           KDDRGNRRDRDNWANGGDRFDRSENPQS+DFQSANDGTDGGN+DDPMFDTFGGQGRHVAP
Sbjct: 601 KDDRGNRRDRDNWANGGDRFDRSENPQSNDFQSANDGTDGGNLDDPMFDTFGGQGRHVAP 660

Query: 661 FASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSA 712
           FASE+PPPVLMPVPGAGPLGPFVPAPPEVAMR+LREQGGPPPFEGGGRNGRPG QLGGSA
Sbjct: 661 FASEMPPPVLMPVPGAGPLGPFVPAPPEVAMRVLREQGGPPPFEGGGRNGRPGPQLGGSA 720

[Close]

BLAST of Lsi06G004370.1 vs. ExPASy TrEMBL
Match: A0A6J1JAF8 (serrate RNA effector molecule-like OS=Cucurbita maxima OX=3661 GN=LOC111485005 PE=3 SV=1)

HSP 1 Score: 1279.6 bits (3310), Expect = 0.0e+00
Identity = 668/754 (88.59%), Postives = 687/754 (91.11%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPP-PAGAPPPPSRRRDRDERDRRDD 60
           + ++M  A  ADESLDRRRD+QEKSSEEQPHSSPPP   A APPPPSRRRDRDERDRRDD
Sbjct: 37  LCKIMAAADTADESLDRRRDQQEKSSEEQPHSSPPPQLAAAAPPPPSRRRDRDERDRRDD 96

Query: 61  RDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSP 120
           RD+DRPPNRR DNYDRNRSPP+LPPRDRDRDRDRDYKRR+SLSPPPPYRDRRHSPPRRS 
Sbjct: 97  RDVDRPPNRRNDNYDRNRSPPTLPPRDRDRDRDRDYKRRNSLSPPPPYRDRRHSPPRRS- 156

Query: 121 PPPYKRSRRDD-GGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRY 180
           PPP+KRSRRDD GGYDGRKGSPRGGFGPGDRRFGYDYGGGYERE+RGRPGYVDER  GRY
Sbjct: 157 PPPFKRSRRDDGGGYDGRKGSPRGGFGPGDRRFGYDYGGGYERELRGRPGYVDERSLGRY 216

Query: 181 IGRSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKS 240
           IGRSSGGYQDWDSSRGGHGD LNAG GQ                         RYQEYKS
Sbjct: 217 IGRSSGGYQDWDSSRGGHGDPLNAGAGQREGLMTYKQFIQELEDDILPAEAEPRYQEYKS 276

Query: 241 EYITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGP 300
           EYITTQKQ+FFDSHKDEEW                RNELAQRTAKDFL+DLQSGTLELGP
Sbjct: 277 EYITTQKQSFFDSHKDEEWLKDKYHPTNLVTVIERRNELAQRTAKDFLIDLQSGTLELGP 336

Query: 301 GINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQI 360
           GINAAATNKSGQ SEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQI
Sbjct: 337 GINAAATNKSGQTSEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQI 396

Query: 361 DIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVE 420
           DIEQAQ+LVRKLDSEKGIEENIL GSDSDKLGR+KAHGGSSGPVIIIRGLTTVKGLEGVE
Sbjct: 397 DIEQAQSLVRKLDSEKGIEENILCGSDSDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVE 456

Query: 421 LLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERL 480
           LLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLD RWQERL
Sbjct: 457 LLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDSRWQERL 516

Query: 481 RGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHL 540
           RGQD LE MTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHL
Sbjct: 517 RGQDPLETMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHL 576

Query: 541 NLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDD 600
           NLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLD RLKDD
Sbjct: 577 NLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDARLKDD 636

Query: 601 RGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFAS 660
           RGNRRDRDNWANGGDRFDRSENPQS+DFQSANDG+DGGN+DDPMFDTFGGQGRHVAPFAS
Sbjct: 637 RGNRRDRDNWANGGDRFDRSENPQSNDFQSANDGSDGGNLDDPMFDTFGGQGRHVAPFAS 696

Query: 661 EIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPIL 712
           E+PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPIL
Sbjct: 697 EMPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPIL 756

[Close]

BLAST of Lsi06G004370.1 vs. NCBI nr
Match: XP_038878917.1 (serrate RNA effector molecule [Benincasa hispida])

HSP 1 Score: 1328.9 bits (3438), Expect = 0.0e+00
Identity = 691/752 (91.89%), Postives = 698/752 (92.82%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNMA AADESLDRRRDRQEKSSEEQPHSSPP  PA  PPPPSRRRDRDERDRRD+R
Sbjct: 1   MAEVMNMATAADESLDRRRDRQEKSSEEQPHSSPPSQPAVGPPPPSRRRDRDERDRRDER 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           DIDRPP RRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DIDRPPYRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERP GRY+G
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPLGRYMG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDSSRGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSSRGGHGDALNAGGGQREGLMTYKQFIQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPGI 300
           ITTQKQAFFDSHKDEEW                RNELAQRTAKDFLLDLQSGTL+LGPGI
Sbjct: 241 ITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGI 300

Query: 301 NAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDI 360
           NAAATNKSG ASEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQIDI
Sbjct: 301 NAAATNKSGHASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDI 360

Query: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420
           EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL
Sbjct: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420

Query: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRG 480
           DTLLTYLWRIHG+DYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLDLRWQERLRG
Sbjct: 421 DTLLTYLWRIHGVDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDLRWQERLRG 480

Query: 481 QDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540
           QDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL
Sbjct: 481 QDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540

Query: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600
           KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKP RRRMNLDGRLKDDRG
Sbjct: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPPRRRMNLDGRLKDDRG 600

Query: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEI 660
           NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGG IDDPMFDTFGGQGRHVAPFASEI
Sbjct: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGKIDDPMFDTFGGQGRHVAPFASEI 660

Query: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILAL 712
           PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPILAL
Sbjct: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILAL 720

[Close]

BLAST of Lsi06G004370.1 vs. NCBI nr
Match: XP_008451085.1 (PREDICTED: serrate RNA effector molecule [Cucumis melo] >TYK09920.1 serrate RNA effector molecule [Cucumis melo var. makuwa])

HSP 1 Score: 1323.9 bits (3425), Expect = 0.0e+00
Identity = 689/752 (91.62%), Postives = 699/752 (92.95%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQ+KSS+EQPHSSPP  P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQDKSSDEQPHSSPPSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVD+RP GRYIG
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDDRPLGRYIG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNAGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPGI 300
           ITTQKQAFFDSHKDEEW                RNELAQRTAKDFLLDLQSGTL+LGPGI
Sbjct: 241 ITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGI 300

Query: 301 NAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDI 360
           +AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQIDI
Sbjct: 301 SAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDI 360

Query: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420
            QAQALVRKLDSEKGIEENILSGSDSDKLGR+KAHGGSSGPVIIIRGLTTVKGLEGVELL
Sbjct: 361 GQAQALVRKLDSEKGIEENILSGSDSDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELL 420

Query: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRG 480
           DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLDLRWQERLRG
Sbjct: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMASGADEWEKKLDLRWQERLRG 480

Query: 481 QDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540
           QDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL
Sbjct: 481 QDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540

Query: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600
           KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG
Sbjct: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600

Query: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEI 660
           NRRDRDNWANGGDRFDRSENPQSSDF SANDGTDGGNIDDPMFD+FGGQGRHVAPFASEI
Sbjct: 601 NRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDGGNIDDPMFDSFGGQGRHVAPFASEI 660

Query: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILAL 712
           PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPILAL
Sbjct: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILAL 720

[Close]

BLAST of Lsi06G004370.1 vs. NCBI nr
Match: KAA0055666.1 (serrate RNA effector molecule [Cucumis melo var. makuwa])

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 688/777 (88.55%), Postives = 699/777 (89.96%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQ+KSS+EQPHSSPP  P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQDKSSDEQPHSSPPSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVD+RP GRYIG
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDDRPLGRYIG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNAGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW-----------------------------------------RN 300
           ITTQKQAFFDSHKDE+W                                         RN
Sbjct: 241 ITTQKQAFFDSHKDEDWYFLSFTSEFSFFLLFPLIHLFCLFRLRDKYHPTNLVTVIERRN 300

Query: 301 ELAQRTAKDFLLDLQSGTLELGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK 360
           ELAQRTAKDFLLDLQSGTL+LGPGI+AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK
Sbjct: 301 ELAQRTAKDFLLDLQSGTLDLGPGISAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK 360

Query: 361 EMDLISAAPKAHPVSSEQRRIQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAH 420
           EMDL+SAAPKAHPVSSE RRIQIDI QAQALVRKLDSEKGIEENILSGSDSDKLGR+KAH
Sbjct: 361 EMDLLSAAPKAHPVSSEPRRIQIDIGQAQALVRKLDSEKGIEENILSGSDSDKLGRDKAH 420

Query: 421 GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK 480
           GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK
Sbjct: 421 GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK 480

Query: 481 NSNMAVGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGW 540
           NSNMA GADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGW
Sbjct: 481 NSNMASGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGW 540

Query: 541 KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM 600
           KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM
Sbjct: 541 KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM 600

Query: 601 QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDG 660
           QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDF SANDGTDG
Sbjct: 601 QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDG 660

Query: 661 GNIDDPMFDTFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP 712
           GNIDDPMFD+FGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP
Sbjct: 661 GNIDDPMFDSFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP 720

[Close]

BLAST of Lsi06G004370.1 vs. NCBI nr
Match: XP_004144078.1 (serrate RNA effector molecule [Cucumis sativus] >KGN66722.2 hypothetical protein Csa_007340 [Cucumis sativus])

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 683/752 (90.82%), Postives = 696/752 (92.55%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQEKSS+EQPHSSP   P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQEKSSDEQPHSSPQSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERP GR++G
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPMGRFMG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALN GGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNPGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPGI 300
           ITTQKQAFFDSHKDEEW                RNELAQRTAKDFLLDLQSGTL+LGPGI
Sbjct: 241 ITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGI 300

Query: 301 NAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDI 360
           +AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQIDI
Sbjct: 301 SAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDI 360

Query: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420
            QAQALVRKLDSEKGIEENILSGSD+DKLGR+KAHGGSSGPVIIIRGLTTVKGLEGVELL
Sbjct: 361 GQAQALVRKLDSEKGIEENILSGSDNDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELL 420

Query: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRG 480
           DTLLTYLWRIHG+DYYGMVETREAKGLRHVREEGK+SNMA GADEWEKKLDLRWQERLRG
Sbjct: 421 DTLLTYLWRIHGIDYYGMVETREAKGLRHVREEGKSSNMAGGADEWEKKLDLRWQERLRG 480

Query: 481 QDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540
           QDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL
Sbjct: 481 QDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540

Query: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600
           KHPELVMELTSKVREELYFQNYMND DAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG
Sbjct: 541 KHPELVMELTSKVREELYFQNYMNDTDAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600

Query: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEI 660
           NRRDRDNWANGGDRFDRSENPQSSDF SANDGTDGGNIDDPMFD+FGGQGRHVAPFASEI
Sbjct: 601 NRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDGGNIDDPMFDSFGGQGRHVAPFASEI 660

Query: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILAL 712
           PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPILAL
Sbjct: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILAL 720

[Close]

BLAST of Lsi06G004370.1 vs. NCBI nr
Match: XP_023516039.1 (serrate RNA effector molecule-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1292.3 bits (3343), Expect = 0.0e+00
Identity = 676/757 (89.30%), Postives = 692/757 (91.41%), Query Frame = 0


Query: 1   MAEVMNMAAA--ADESLDRRRDRQEKSSEEQPHSSPPPPP--AGAPPPPSRRRDRDERDR 60
           MAEVMNMAAA  ADESLDRRRD+QEKSSEEQPHSSPPP P  A APPPPSRRRDRDERDR
Sbjct: 1   MAEVMNMAAADTADESLDRRRDQQEKSSEEQPHSSPPPQPAAAAAPPPPSRRRDRDERDR 60

Query: 61  RDDRDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPR 120
           RDDRD+DRPPNRR DNYDRNRSPP+LPPRDRDRDRDRDYKRR+SLSPPPPYRDRRHSPPR
Sbjct: 61  RDDRDVDRPPNRRNDNYDRNRSPPTLPPRDRDRDRDRDYKRRNSLSPPPPYRDRRHSPPR 120

Query: 121 RSPPPPYKRSRRDD-GGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPP 180
           RSPPPP+KRSRRDD GGYDGRKGSPRGGFGPGDRRFGYDYGGGYERE+RGRPGYVDER  
Sbjct: 121 RSPPPPFKRSRRDDGGGYDGRKGSPRGGFGPGDRRFGYDYGGGYERELRGRPGYVDERSL 180

Query: 181 GRYIGRSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQE 240
           GRYIGRSSGGYQDWDSSRGGHGD LNAG GQ                         RYQE
Sbjct: 181 GRYIGRSSGGYQDWDSSRGGHGDPLNAGAGQREGLMTYKQFIQELEDDILPAEAERRYQE 240

Query: 241 YKSEYITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLE 300
           YKSEYITTQKQ+FFDSHKDEEW                RNELAQRTAKDFL+DLQSGTLE
Sbjct: 241 YKSEYITTQKQSFFDSHKDEEWLKDKYHPTNLVTVIERRNELAQRTAKDFLIDLQSGTLE 300

Query: 301 LGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRR 360
           LGPGINAAATNKSGQ SEPNSDDEADNDGKRR HGRGPAKEMDL+SAAPKAHPVSSE RR
Sbjct: 301 LGPGINAAATNKSGQTSEPNSDDEADNDGKRRCHGRGPAKEMDLLSAAPKAHPVSSEPRR 360

Query: 361 IQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLE 420
           IQIDIEQAQ+LVRKLDSEKGIEENIL GSDSDKLGR++AHGGSSGPVIIIRGLTTVKGLE
Sbjct: 361 IQIDIEQAQSLVRKLDSEKGIEENILCGSDSDKLGRDRAHGGSSGPVIIIRGLTTVKGLE 420

Query: 421 GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQ 480
           GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLD RWQ
Sbjct: 421 GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDSRWQ 480

Query: 481 ERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH 540
           ERLRGQD LE MTAKDKIEAAAL +FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH
Sbjct: 481 ERLRGQDPLETMTAKDKIEAAALGAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH 540

Query: 541 KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRL 600
           KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLD RL
Sbjct: 541 KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDARL 600

Query: 601 KDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAP 660
           KDDRGNRRDRDNWANGGDRFDRSENPQS+DFQSANDGTDGGN+DDPMFDTFGGQGRHVAP
Sbjct: 601 KDDRGNRRDRDNWANGGDRFDRSENPQSNDFQSANDGTDGGNLDDPMFDTFGGQGRHVAP 660

Query: 661 FASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSA 712
           FASE+PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSA
Sbjct: 661 FASEMPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSA 720

[Close]

BLAST of Lsi06G004370.1 vs. TAIR 10
Match: AT2G27100.1 (C2H2 zinc-finger protein SERRATE (SE) )

HSP 1 Score: 820.8 bits (2119), Expect = 8.2e-238
Identity = 476/756 (62.96%), Postives = 549/756 (72.62%), Query Frame = 0


Query: 11  ADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSR----------RRDRDERDRRDDR 70
           AD +L        +  E+   SSPPPPP  +  P             RR+RD R+RRD+R
Sbjct: 2   ADVNLPPSDSVDNRLPEKSTSSSPPPPPPSSSLPQQEQEQDQQQLPLRRERDSRERRDER 61

Query: 71  DIDR-PPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSP 130
           DI+R PPNRR    +R+RSP   PPR       RDYKRR SLSPPPPYRDRRHSPP+R  
Sbjct: 62  DIERPPPNRR----ERDRSPLP-PPR-------RDYKRRPSLSPPPPYRDRRHSPPQRR- 121

Query: 131 PPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYI 190
            PP KR RRDD GYDGR+GSPRGG+GP DRRFGYD+GGGY+REM GRPGY DERP GR++
Sbjct: 122 SPPQKRYRRDDNGYDGRRGSPRGGYGPPDRRFGYDHGGGYDREMGGRPGYGDERPHGRFM 181

Query: 191 GRSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSE 250
           GR    YQDW+  RGG+GDA N+G  Q                         RYQEYKSE
Sbjct: 182 GR----YQDWEGGRGGYGDASNSGNPQRDGLMSYKQFIQELEDDILPSEAERRYQEYKSE 241

Query: 251 YITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPG 310
           YITTQK+AFF++HK+E+W                RN+LAQ+ AKDFLLDLQSGTL+LGP 
Sbjct: 242 YITTQKRAFFNTHKEEDWLKNKYHPTNLLSVIERRNDLAQKVAKDFLLDLQSGTLDLGPA 301

Query: 311 INAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQID 370
           +   A NKSG+ SEPNS+DEA   GKR+RHG G AKE +L+SAAPKA   +S+ +RI  D
Sbjct: 302 V--TALNKSGRTSEPNSEDEAAGVGKRKRHGMGGAKENELLSAAPKAPSFTSDPKRILTD 361

Query: 371 IEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVEL 430
           +EQ QALVRKLDSEK IEEN+L GS+++K GREK H GS+GPV+IIRGLT+VKGLEGVEL
Sbjct: 362 VEQTQALVRKLDSEKKIEENVLQGSETEKSGREKLHSGSTGPVVIIRGLTSVKGLEGVEL 421

Query: 431 LDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLR 490
           LDTL+TYLWR+HGLDYYG VET EAKGLRHVR EGK S+     DE E K D  WQERL+
Sbjct: 422 LDTLVTYLWRVHGLDYYGKVETNEAKGLRHVRAEGKVSD--AKGDENESKFDSHWQERLK 481

Query: 491 GQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLN 550
           GQD LEVM AK+KI+AAA E+ DP+VRKIRDEKYGWKYGCGAKGCTKLFHA EFV+KHL 
Sbjct: 482 GQDPLEVMAAKEKIDAAATEALDPHVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLK 541

Query: 551 LKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDR 610
           LKH ELV ELT+KVREELYFQNYMND +APGG P  QQS P+D+P RR+ +++ RL+DDR
Sbjct: 542 LKHTELVTELTTKVREELYFQNYMNDPNAPGGQPATQQSGPRDRPIRRKPSMENRLRDDR 601

Query: 611 GNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGR-HVAPFAS 670
           G RR+RD  ANG DR DRSE+ Q  D        DGGN  +  +D FGGQG  HV PF S
Sbjct: 602 GGRRERDGRANGNDRNDRSEDQQRGD-------NDGGNPGEVGYDAFGGQGGVHVPPFLS 661

Query: 671 EI-PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP-PPFEGGGRNGRPGAQLGGSAP 712
           +I PPP+LMPVPGAGPLGPFVPAPPEVAM+M R+  GP PPFEG GR        GG AP
Sbjct: 662 DINPPPMLMPVPGAGPLGPFVPAPPEVAMQMFRDPSGPNPPFEGSGR--------GGPAP 720

The following BLAST results are available for this feature:

BLAST of Lsi06G004370.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVD0	1.2e-236	62.96	Serrate RNA effector molecule OS=Arabidopsis thaliana OX=3702 GN=SE PE=1 SV=2	[more]
A4IFB1	2.9e-06	25.94	Serrate RNA effector molecule homolog OS=Bos taurus OX=9913 GN=SRRT PE=2 SV=1	[more]
Q9BXP5	2.9e-06	25.94	Serrate RNA effector molecule homolog OS=Homo sapiens OX=9606 GN=SRRT PE=1 SV=1	[more]
Q99MR6	2.9e-06	25.94	Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1	[more]

BLAST of Lsi06G004370.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CEZ5	0.0e+00	91.62	Serrate RNA effector molecule OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BRT0	0.0e+00	91.62	serrate RNA effector molecule OS=Cucumis melo OX=3656 GN=LOC103492466 PE=3 SV=1	[more]
A0A5A7UN10	0.0e+00	88.55	Serrate RNA effector molecule OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A6J1HAH6	0.0e+00	88.90	serrate RNA effector molecule-like OS=Cucurbita moschata OX=3662 GN=LOC111461600...	[more]
A0A6J1JAF8	0.0e+00	88.59	serrate RNA effector molecule-like OS=Cucurbita maxima OX=3661 GN=LOC111485005 P...	[more]

BLAST of Lsi06G004370.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878917.1	0.0e+00	91.89	serrate RNA effector molecule [Benincasa hispida]	[more]
XP_008451085.1	0.0e+00	91.62	PREDICTED: serrate RNA effector molecule [Cucumis melo] >TYK09920.1 serrate RNA ...	[more]
KAA0055666.1	0.0e+00	88.55	serrate RNA effector molecule [Cucumis melo var. makuwa]	[more]
XP_004144078.1	0.0e+00	90.82	serrate RNA effector molecule [Cucumis sativus] >KGN66722.2 hypothetical protein...	[more]
XP_023516039.1	0.0e+00	89.30	serrate RNA effector molecule-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi06G004370.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27100.1	8.2e-238	62.96	C2H2 zinc-finger protein SERRATE (SE)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 312..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 523..609
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 540..572
None	No IPR available	PANTHER	PTHR13165:SF3	SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN	coord: 198..711
None	No IPR available	PANTHER	PTHR13165:SF3	SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN	coord: 1..191
IPR007042	SERRATE/Ars2 , C-terminal	PFAM	PF04959	ARS2	coord: 411..614 e-value: 4.0E-41 score: 141.4
IPR039727	SERRATE/Ars2	PANTHER	PTHR13165	ARSENITE-RESISTANCE PROTEIN 2	coord: 198..711
IPR039727	SERRATE/Ars2	PANTHER	PTHR13165	ARSENITE-RESISTANCE PROTEIN 2	coord: 1..191
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 478..501

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi06G004370	Lsi06G004370	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G004370.1.exon.10	Lsi06G004370.1.exon.10	exon
Lsi06G004370.1.exon.9	Lsi06G004370.1.exon.9	exon
Lsi06G004370.1.exon.8	Lsi06G004370.1.exon.8	exon
Lsi06G004370.1.exon.7	Lsi06G004370.1.exon.7	exon
Lsi06G004370.1.exon.6	Lsi06G004370.1.exon.6	exon
Lsi06G004370.1.exon.5	Lsi06G004370.1.exon.5	exon
Lsi06G004370.1.exon.4	Lsi06G004370.1.exon.4	exon
Lsi06G004370.1.exon.3	Lsi06G004370.1.exon.3	exon
Lsi06G004370.1.exon.2	Lsi06G004370.1.exon.2	exon
Lsi06G004370.1.exon.1	Lsi06G004370.1.exon.1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G004370.1.three_prime_UTR.1	Lsi06G004370.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G004370.1.CDS.10	Lsi06G004370.1.CDS.10	CDS
Lsi06G004370.1.CDS.9	Lsi06G004370.1.CDS.9	CDS
Lsi06G004370.1.CDS.8	Lsi06G004370.1.CDS.8	CDS
Lsi06G004370.1.CDS.7	Lsi06G004370.1.CDS.7	CDS
Lsi06G004370.1.CDS.6	Lsi06G004370.1.CDS.6	CDS
Lsi06G004370.1.CDS.5	Lsi06G004370.1.CDS.5	CDS
Lsi06G004370.1.CDS.4	Lsi06G004370.1.CDS.4	CDS
Lsi06G004370.1.CDS.3	Lsi06G004370.1.CDS.3	CDS
Lsi06G004370.1.CDS.2	Lsi06G004370.1.CDS.2	CDS
Lsi06G004370.1.CDS.1	Lsi06G004370.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi06G004370.1.five_prime_UTR.1	Lsi06G004370.1.five_prime_UTR.1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi06G004370.1	Lsi06G004370.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus