Lsi06G004370 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G004370
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	serrate RNA effector molecule
Location	chr06: 4768761 .. 4776405 (-)
RNA-Seq Expression	Lsi06G004370
Synteny	Lsi06G004370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAGATCAGTGAATGAAACTCCGGACTTTCTCGACCTCACTTCTCCGACGCTTTGGTTTCGTTTTAGGGTTTCATTTCTTCTTCATCTTCTTCAATTGCTGTGTAAAATCATGGCCGAGGTTATGAACATGGCCGCCGCCGCCGACGAGTCCTTGGACCGCCGTCGTGATCGTCAAGAGAAATCGTCTGAGGAGCAACCTCATTCCTCGCCGCCGCCGCCGCCAGCTGGTGCTCCTCCTCCTCCCTCTAGAAGAAGGGATAGAGATGAGAGAGATAGGAGAGATGACCGGGATATTGATCGTCCTCCGAATCGACGCGGTGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGAGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGTAGACACTCGCCTCCCAGACGGTCTCCTCCTCCACCTTACAAGCGTTCCAGGAGGGATGATGGTGGATATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTGAGTGGGTGTGAAACTGTTTTGATTTGTCGAGCTTGATTGTTGTTCTGAAGATTTGGAGCTGAGTTCCCTGCATTTGAAATTAAAATGGCATTCACGGATTCTAGAGTCGATTTTCATTTAAATGATAAGATTTTTCTTGCTAATTCTGGGTTGTGGGATTCTAATTTTTCCATAAAACCATAACTAGGTCCGCCAAACTTGGCATTGCCACTAAAAACTTCTAAGGTCCTATGTTTGAACCATTAACTGATGCTGGAAGCCATTTTGAACATAAAATTTGAACTCAACAAGCACCTTTTCCGTGAGACAAATAATGTTTCACACATAGCCTTTAAAATAAATGGTTCCTCCCATTTCGTTTGAGACAAAATCGTTCATCTCATTTTTTATTTTAATGGTTCAACCCATTTAACATACAAATAGATATCTAGGGGATGAACCATTTCATAAAGGAATAATGTTTATCCTATATTTGTTTGCTCTGTTTGTTGGACATAGTTGTTGAAGGTCTTCTATGTTTTTCTTAATGGTCTCAACGGTCAGAGATGCTACTTCACGTGTATTGTATTTTCTCAATCCCCATCATCTCTTTACCCCCTAATCCCTCCCCTAATATAAGAGCGTGACGTTTGAGTTAATGCCCTCAGTTGTACTTTCTATTACAATGGACACCTCTGCTCACTTTTTTGATGCTTCCTAGTCAATGTTCATCTTCTATTTGTGCTCCCGGTACTTTTTAAGTGACTATCGTGTTTTGTGGATTTGTTTCTGATTTTTTTCTCTTGAATAATTGGGTTTATTTCGTGCTTTGAGTTCTTAATCAAAGTTATTTTTCCCTTAAAAAACCGGTTTCTCGTATTATGATTGTGGGAATAGCATTTCTGTTGACTAATGCTTAGAGGCTGTCATTTAAGTATTGATATGTTTTATTAATTTATCTATCTACTTTATCTTATCCCAAGGTTTGGCTATGATTATGGTGGGGGATATGAGCGGGAAATGCGAGGCCGGCCTGGATATGTTGATGAAAGACCTCCAGGTCGATACATTGGTCGTTCATCCGGTGGCTATCAAGGTGGTGTTTCTATTAACTGATAAAATAAACTCAAGCCTTTTCATGACTTTGGTGTATACTTATACAAACCGAGTCTATTTCATTTTTTTCAGATATTGTTATCGAACATGAAATACTTAAATTTCAATTATGTCAATGGGAAACTTTGAGTTTTCACCTTGTTCTTTGTTGAAAATGCAAAAATATTCATTGGTTTGGAAAATGAGATATTGTATAGTGTTTGTATTCGGCCAATATCAGCCCTTTTAGCCAATTTATAGAGAAGAGTTTTTCTCATTTTCTTTTCTGATGCAGGATTATGCCAGACTAATTTAATTATTAAAGAGAGATTTTTTAATGGCTTTGTCTTTTTCCCTCTTGTCTAAATGTGATATCATTCTTATGCCCCCTTTGGTATATAAATTTAAGCAATTAGTAATGCTATACTGGCAGAATAACATTTTATTTGTCAATACATTTCCATGCAATGGTTTTTAGAGTCCTATAGCTCCCTATGTTTGTGAGCCAAACTGTATAAAGTATATATAAGGGATCTTTAGTTTATTCATATCTGTAAAGTTCAGTATAAATCTGGAAATTCGCATGTTGAGACCTTTTGACATCGAGTACTATTTGTGGCTTTTGAATTAGAACTGCAGCATCTCCTTGCTTCCTAGCTCTCAATTGTGCATCTGTTGTATGAATACGATTACCAGTTTCTCTTTTTCAGTGTTTTTCAGTGTTTAACAGCTGTAGAAATGTTTCCAGAAAAAAAATGTATGTCTCTGGTAGTGGTGAACATTTTGTTTGAATTGATGCTTAGATCTGGATGATCAATGTTATGGATAAGATACTCCCAATCGATTTTCTTATTTTTTTTAAGCTGTGTTCTGCAGACTGGGATTCTAGTCGTGGTGGGCATGGTGATGCACTCAATGCAGGAGGTGGCCAAAGGTTAGCATTCAGTCACAACTCTTTTGTTGTCTTTATACATAATTGATATTGTTCTGTGATATCTCTCTGAATATGCGTGCCTTGGGTTATTGTGTTAGTTTCTGTATGAATATGTGATTTATTTTCTATGCTGCATGAGATATCATGGGCAAATCATGACTAAGCCAGCAGGGTAGGTCTGAAATTGAACTATAATAACAATGAAACAAACAGCCAATGCTTATTGAAAACTGCAAAGGGTGGATTGTCAATGGCTGAATTTCTATTGAAAGTGAATTTGCTCTTGGAAAGGGAAAATGCTGGGTGTTTCCTTTCTGTAGCTGTATGGTAGAAAATATATATTTTCCTCTGCCCTTTCTAATTATGTCGTTTCCAAGTTATGCAACCATGTTTTTGGGTTATTTCTTCTCTCCAGTGATGGGCGGTTATGCTAAACTATTTTGGCCTTTTGGTGGTTTTTATTCAGCATATAAAGCACTTTGTCCTCCAATGTTTGTGGTTCCTTTCGAATTTGAAGTGCTGATTTTGCGACTAATGTTATGTTATTAATGCCTGATCGTCTCTGCTTTGTTATGGCTCTTATTGAAAAATGTGGAAACTATACTTTCCCCTTAATTTGTAGGTTGAACTCTCAAATTTGTTGAGTAGGATTAGGAGTCATTGGAACCATACAAGTTGTATTGAAATTGAACTAAATAATATCACTTAAAGCGTCAAACTGTCAACGTTGATAATTATCTAACAAATAGAAAAAAGTTTTGAAACTTGTGGCTTAAACTGGGCCTCTCCAAATTTCCAGCATTGTCTTGCTTTGTCTCATAATTTTATTGGATTGCGTGATCTAACTTTATCCTTTTAACTTTATTTTCAATGCAATGTTGATAATATGTGATTTCAGAGAAGGCTTGATGACATACAAGCAATTTATTCAAGAACTTGAAGATGATATACTGCCTGCTGAAGCTGAGCGCAGGTATGTTCTAAATGTGCTTTTGATTTTTTTGATCTAATTATATGAGTTTAGTTCTTTTTAGTTTTGTGGAACAACTTCGTTCTTTATTTCAGATATCAAGAATACAAGTCAGAGTATATTACAACACAGAAACAAGCCTTTTTTGATTCTCATAAGGATGAAGAATGGTACTTCTTGTCTTTTACATCTGAATTTCCTTTCTTTTTGCTATTTCCCCTAATTCATCTCTTTTGTCTATTTAGGTTGAGAGACAAATATCATCCGACCAACCTAGTTACTGTCATTGAAAGGTGTTTTTCTGACCGTCTTCCCCAAAAAATGGAGATTCTTATAGTTGTGGTTAATTTCTTCACATTTTTTTCATCTTTAACAAGTGGACATGAAATTGGCCATTTTATCCTTTTTTTAATTTGATATTTTCTTTCTTATTATATATATATTTTTTTCATTTTTTTAAATATTGTGGTTTATTCTAATATTTGGATGATGTGTTAAGGAGGAATGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGAATTGTAAGATTGGACTTCCCACAATTATGTTTGGATTCAGAAAATTTCAACTGTGATGGTAAACCAATGCTGTTCTATTCTATGATGCAGAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGGCTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCAAAAGAAATGGATCTTATTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACAAAGACGAATCCAGATTGACATTGAACAAGCTCAAGCGCTTGTCCGTAAACTTGATTCCGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGATAGTGACAAACTAGGTCGGGAAAAAGCACATGGTGGCTCTTCTGGTCCAGTCATAATCATACGGGGGCTGACAACTGTGAAAGGCTTGGAGGGTGTTGAGCTATTGGACACACTTCTCACATATCTGTGGCGCATCCATGGTCTAGATTACTATGGAATGGTCGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAACTCTAACATGGCTGTTGGTGCTGATGAGTGGGAGAAGAAACTTGACTTGCGCTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGAATCTTTTGATCCATATGTTCGCAAGATAAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCCCCTGAGTTTGTACATAAGCATCTTAACTTGAAACATCCCGAGCTTGTGATGGAACTGACTTCAAAAGTGCGTGAGGAGCTGTATTTCCAAAATTACATGAAGTAAGTGAAATTTCTGACAGCAATTCTTTCTCACTCTTGATGGAAGATGTCATGTCATTGACTTATACCTTAATTCTTCACAGTGATGCAGATGCTCCTGGAGGGACGCCTGTTATGCAACAATCACTTCCGGTATGTTTATTATGTATGCATTGGCTGTGACCACATATTAGATGCCAACGAATAGTAAACTTTCCTTTGTTGGATCGGTAGTTTTCATGCCTCATCACCACAGAACTGCTGTATTGCCTGTGACAACATATTAGATAACAACAGATAGTAAATTTTCCTTTGTTGGATCGGGAGTTTTGATTTCCCATTGCCACAGAACTGCCCCTCTCAAAGAATAACAAGAAAAAAAAACCCTATTACACACAAACAGAAGAATAATAGGATCAGTTTTTCCCCAAGTTAGGTGTGTGTAAATTGGAATCCCCTCTTTTATTGAATAATGTAATAAAAATTATTACACACACAAACGTACATAAAGGACGGTAGAATGGTTGGTTAGTGTTAATGTTATCCACAATTATTATCTATAACATGGTATAAGAACATATTTTTCATTCCATTTTGTTGGGTAATTGTTGTTTTCGTCATCATACCATTCTAATGGGTCATTTTTCATTAACGAGGATCTGAGGTGTATTCCTATAGGTTTTTGGTATGCCTAGTTTGTAGTGTGGGAAGTGTCATTTTTTGGACTGACAATGTAAATATGTGCAGTCTAGCAATATTTTAGGCATAGAATCGGTTTTTCTTTTTGGCTTTCCTTTCCTTTTCTTTTTAATCCATCAAGAGACAATTTTCTTATGCAGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGACAGAGGCAATCGCAGGGACCGCGATAATTGGGCTAATGGGGGTGACAGATTTGATAGATCGGAGAACCCACAATCAAGTGATTTCCAATCAGCAAATGATGGTACGGATGGTGGAAACATTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGAAGACATGTTGCTCCTTTTGCCTCTGAAATACCACCGCCAGTGCTTATGCCCGTTCCTGGTGCTGGGTATGTTTGCTTAACTGCTTAGCATTTTTGTGCCCTTTGCGTTCATGGTGATCTTACATGTTATGTTTTCTCGCAGTCCATTAGGACCTTTTGTCCCTGCTCCGCCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGCCCCCCTCCTTTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGAGCTCAATTAGGTGGATCTGCTCCAATCCTTGCTTTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGGTATAACTGCTGTAGATTTTAGCTACTGATATGGTTCTTTTTACCCTTTTTGTAATGTTGCTTTCATAGACCTTCCTTCTTGTATCAGCCTATCAGGTACAGTAGACCGTCTAGGCAGATTAATCTAAATTTCTATATGCAGCTCATAAAAGTCAACTTGAAAACAATACCCATACCCTTGTGGATAAAAAAAATGTGAAAGAATATAGTGGGATCTATATTTTTAGTGGTGAGGGATTAGTAAAGTTTTTGGTTCCCTTGCTGCAAGCCATGTTCTTTGTCCTGATCTGGAATCAGGATACAGTAACAATATAACTCCTGAACCTTTAGCGTTTTATATAACTAGATATAGAAATCAAGCGATCACCTGACACATTTCTCCAACATATACTTCGATGCTTCTTGGTATAGATTTATTTGTAGGGTCACTCTGCAGCCAGAGAAGTTTTTCTTAATGAGGTATTTACTAATAGCAAAATATCATGCAGTTATCAAGACCTAGACGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAGATATATTTGGCATCAGCAAAGTTTAGAGGCCCATTCGTGTTTTTAAGAAGTGGGGATGCAACTCCAAAACTGGTACGAATTCAGACTGGTCACTGCTTGAAATTCTTCATGTTGCTGAAGAAGTTTCCTTTGTTTCACCCCATAGAGTAAGAACTGAACTTTGAGTTGATCACATTCTGGCTGTGGGCAAGTACAAATACCTTCTTGAGAATTGTGCATTCATTTAACTTTTAACTTTTTCCTCCCTACTCTCTGTATTCTTGGTGAAGAAGGAATTCGACCCGAAGGCAAGAGATTTAATGATCGAAAAATTTCCCATCTTTCGAATTGTAGAACTTAAATTCTTCTTAAGATAGGAGTGTGCATTCCCTTTAGTTTTATTTTATTTTTACTAATAGTCGATTTTGGTCAAGCAAGAACTAGTAATAAAATTGTGGATATTAAAACTTGTTTTATGAACCTTCTTTCTAACAGTAAAGATTATGTAATGTTAGGATGCTCCATTGTTATATTTTAGAGAATATCCAGTTCCCAGGAAGCCTCCCATTTGACATGTTTGAGTAGAATGGAAATTTGTTCTATAGTACTCTATGTTCCATTATGAAGTTGTTTCAGGTTGTGCTTAAATTTTTTTTTTTTTCAGATGGTCACTAAGTGGTAGAAACTTAGGTGGATTTGTCTTCTTTTTCTTTTTTTCCCCTTCTCTTCCCCTTTGAAATTGTTAATTAATGCCAATGGTCTTGT

mRNA sequence

GTCAGATCAGTGAATGAAACTCCGGACTTTCTCGACCTCACTTCTCCGACGCTTTGGTTTCGTTTTAGGGTTTCATTTCTTCTTCATCTTCTTCAATTGCTGTGTAAAATCATGGCCGAGGTTATGAACATGGCCGCCGCCGCCGACGAGTCCTTGGACCGCCGTCGTGATCGTCAAGAGAAATCGTCTGAGGAGCAACCTCATTCCTCGCCGCCGCCGCCGCCAGCTGGTGCTCCTCCTCCTCCCTCTAGAAGAAGGGATAGAGATGAGAGAGATAGGAGAGATGACCGGGATATTGATCGTCCTCCGAATCGACGCGGTGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGAGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGTAGACACTCGCCTCCCAGACGGTCTCCTCCTCCACCTTACAAGCGTTCCAGGAGGGATGATGGTGGATATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGCTATGATTATGGTGGGGGATATGAGCGGGAAATGCGAGGCCGGCCTGGATATGTTGATGAAAGACCTCCAGGTCGATACATTGGTCGTTCATCCGGTGGCTATCAAGACTGGGATTCTAGTCGTGGTGGGCATGGTGATGCACTCAATGCAGGAGGTGGCCAAAGATATCAAGAATACAAGTCAGAGTATATTACAACACAGAAACAAGCCTTTTTTGATTCTCATAAGGATGAAGAATGGAGGAATGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGAATTAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGGCTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCAAAAGAAATGGATCTTATTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACAAAGACGAATCCAGATTGACATTGAACAAGCTCAAGCGCTTGTCCGTAAACTTGATTCCGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGATAGTGACAAACTAGGTCGGGAAAAAGCACATGGTGGCTCTTCTGGTCCAGTCATAATCATACGGGGGCTGACAACTGTGAAAGGCTTGGAGGGTGTTGAGCTATTGGACACACTTCTCACATATCTGTGGCGCATCCATGGTCTAGATTACTATGGAATGGTCGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAACTCTAACATGGCTGTTGGTGCTGATGAGTGGGAGAAGAAACTTGACTTGCGCTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGAATCTTTTGATCCATATGTTCGCAAGATAAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCCCCTGAGTTTGTACATAAGCATCTTAACTTGAAACATCCCGAGCTTGTGATGGAACTGACTTCAAAAGTGCGTGAGGAGCTGTATTTCCAAAATTACATGAATGATGCAGATGCTCCTGGAGGGACGCCTGTTATGCAACAATCACTTCCGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGACAGAGGCAATCGCAGGGACCGCGATAATTGGGCTAATGGGGGTGACAGATTTGATAGATCGGAGAACCCACAATCAAGTGATTTCCAATCAGCAAATGATGGTACGGATGGTGGAAACATTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGAAGACATGTTGCTCCTTTTGCCTCTGAAATACCACCGCCAGTGCTTATGCCCGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCGCCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGCCCCCCTCCTTTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGAGCTCAATTAGGTGGATCTGCTCCAATCCTTGCTTTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGACGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAGATATATTTGGCATCAGCAAAGTTTAGAGGCCCATTCGTGTTTTTAAGAAGTGGGGATGCAACTCCAAAACTGGTACGAATTCAGACTGGTCACTGCTTGAAATTCTTCATGTTGCTGAAGAAGTTTCCTTTGTTTCACCCCATAGAGTAAGAACTGAACTTTGAGTTGATCACATTCTGGCTGTGGGCAAGTACAAATACCTTCTTGAGAATTGTGCATTCATTTAACTTTTAACTTTTTCCTCCCTACTCTCTGTATTCTTGGTGAAGAAGGAATTCGACCCGAAGGCAAGAGATTTAATGATCGAAAAATTTCCCATCTTTCGAATTGTAGAACTTAAATTCTTCTTAAGATAGGAGTGTGCATTCCCTTTAGTTTTATTTTATTTTTACTAATAGTCGATTTTGGTCAAGCAAGAACTAGTAATAAAATTGTGGATATTAAAACTTGTTTTATGAACCTTCTTTCTAACAGTAAAGATTATGTAATGTTAGGATGCTCCATTGTTATATTTTAGAGAATATCCAGTTCCCAGGAAGCCTCCCATTTGACATGTTTGAGTAGAATGGAAATTTGTTCTATAGTACTCTATGTTCCATTATGAAGTTGTTTCAGGTTGTGCTTAAATTTTTTTTTTTTTCAGATGGTCACTAAGTGGTAGAAACTTAGGTGGATTTGTCTTCTTTTTCTTTTTTTCCCCTTCTCTTCCCCTTTGAAATTGTTAATTAATGCCAATGGTCTTGT

Coding sequence (CDS)

ATGGCCGAGGTTATGAACATGGCCGCCGCCGCCGACGAGTCCTTGGACCGCCGTCGTGATCGTCAAGAGAAATCGTCTGAGGAGCAACCTCATTCCTCGCCGCCGCCGCCGCCAGCTGGTGCTCCTCCTCCTCCCTCTAGAAGAAGGGATAGAGATGAGAGAGATAGGAGAGATGACCGGGATATTGATCGTCCTCCGAATCGACGCGGTGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGAGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGTAGACACTCGCCTCCCAGACGGTCTCCTCCTCCACCTTACAAGCGTTCCAGGAGGGATGATGGTGGATATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGCTATGATTATGGTGGGGGATATGAGCGGGAAATGCGAGGCCGGCCTGGATATGTTGATGAAAGACCTCCAGGTCGATACATTGGTCGTTCATCCGGTGGCTATCAAGACTGGGATTCTAGTCGTGGTGGGCATGGTGATGCACTCAATGCAGGAGGTGGCCAAAGATATCAAGAATACAAGTCAGAGTATATTACAACACAGAAACAAGCCTTTTTTGATTCTCATAAGGATGAAGAATGGAGGAATGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGAATTAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGGCTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCAAAAGAAATGGATCTTATTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACAAAGACGAATCCAGATTGACATTGAACAAGCTCAAGCGCTTGTCCGTAAACTTGATTCCGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGATAGTGACAAACTAGGTCGGGAAAAAGCACATGGTGGCTCTTCTGGTCCAGTCATAATCATACGGGGGCTGACAACTGTGAAAGGCTTGGAGGGTGTTGAGCTATTGGACACACTTCTCACATATCTGTGGCGCATCCATGGTCTAGATTACTATGGAATGGTCGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAACTCTAACATGGCTGTTGGTGCTGATGAGTGGGAGAAGAAACTTGACTTGCGCTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGAATCTTTTGATCCATATGTTCGCAAGATAAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCCCCTGAGTTTGTACATAAGCATCTTAACTTGAAACATCCCGAGCTTGTGATGGAACTGACTTCAAAAGTGCGTGAGGAGCTGTATTTCCAAAATTACATGAATGATGCAGATGCTCCTGGAGGGACGCCTGTTATGCAACAATCACTTCCGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGACAGAGGCAATCGCAGGGACCGCGATAATTGGGCTAATGGGGGTGACAGATTTGATAGATCGGAGAACCCACAATCAAGTGATTTCCAATCAGCAAATGATGGTACGGATGGTGGAAACATTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGAAGACATGTTGCTCCTTTTGCCTCTGAAATACCACCGCCAGTGCTTATGCCCGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCGCCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGCCCCCCTCCTTTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGAGCTCAATTAGGTGGATCTGCTCCAATCCTTGCTTTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGACGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAG

Protein sequence

MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDRDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPPPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIGRSSGGYQDWDSSRGGHGDALNAGGGQRYQEYKSEYITTQKQAFFDSHKDEEWRNELAQRTAKDFLLDLQSGTLELGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILALSSGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL

Homology

[Close]

BLAST of Lsi06G004370 vs. ExPASy Swiss-Prot
Match: Q9ZVD0 (Serrate RNA effector molecule OS=Arabidopsis thaliana OX=3702 GN=SE PE=1 SV=2)

HSP 1 Score: 820.8 bits (2119), Expect = 1.2e-236
Identity = 476/756 (62.96%), Postives = 549/756 (72.62%), Query Frame = 0


Query: 11  ADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSR----------RRDRDERDRRDDR 70
           AD +L        +  E+   SSPPPPP  +  P             RR+RD R+RRD+R
Sbjct: 2   ADVNLPPSDSVDNRLPEKSTSSSPPPPPPSSSLPQQEQEQDQQQLPLRRERDSRERRDER 61

Query: 71  DIDR-PPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSP 130
           DI+R PPNRR    +R+RSP   PPR       RDYKRR SLSPPPPYRDRRHSPP+R  
Sbjct: 62  DIERPPPNRR----ERDRSPLP-PPR-------RDYKRRPSLSPPPPYRDRRHSPPQRR- 121

Query: 131 PPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYI 190
            PP KR RRDD GYDGR+GSPRGG+GP DRRFGYD+GGGY+REM GRPGY DERP GR++
Sbjct: 122 SPPQKRYRRDDNGYDGRRGSPRGGYGPPDRRFGYDHGGGYDREMGGRPGYGDERPHGRFM 181

Query: 191 GRSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSE 250
           GR    YQDW+  RGG+GDA N+G  Q                         RYQEYKSE
Sbjct: 182 GR----YQDWEGGRGGYGDASNSGNPQRDGLMSYKQFIQELEDDILPSEAERRYQEYKSE 241

Query: 251 YITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPG 310
           YITTQK+AFF++HK+E+W                RN+LAQ+ AKDFLLDLQSGTL+LGP 
Sbjct: 242 YITTQKRAFFNTHKEEDWLKNKYHPTNLLSVIERRNDLAQKVAKDFLLDLQSGTLDLGPA 301

Query: 311 INAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQID 370
           +   A NKSG+ SEPNS+DEA   GKR+RHG G AKE +L+SAAPKA   +S+ +RI  D
Sbjct: 302 V--TALNKSGRTSEPNSEDEAAGVGKRKRHGMGGAKENELLSAAPKAPSFTSDPKRILTD 361

Query: 371 IEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVEL 430
           +EQ QALVRKLDSEK IEEN+L GS+++K GREK H GS+GPV+IIRGLT+VKGLEGVEL
Sbjct: 362 VEQTQALVRKLDSEKKIEENVLQGSETEKSGREKLHSGSTGPVVIIRGLTSVKGLEGVEL 421

Query: 431 LDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLR 490
           LDTL+TYLWR+HGLDYYG VET EAKGLRHVR EGK S+     DE E K D  WQERL+
Sbjct: 422 LDTLVTYLWRVHGLDYYGKVETNEAKGLRHVRAEGKVSD--AKGDENESKFDSHWQERLK 481

Query: 491 GQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLN 550
           GQD LEVM AK+KI+AAA E+ DP+VRKIRDEKYGWKYGCGAKGCTKLFHA EFV+KHL 
Sbjct: 482 GQDPLEVMAAKEKIDAAATEALDPHVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLK 541

Query: 551 LKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDR 610
           LKH ELV ELT+KVREELYFQNYMND +APGG P  QQS P+D+P RR+ +++ RL+DDR
Sbjct: 542 LKHTELVTELTTKVREELYFQNYMNDPNAPGGQPATQQSGPRDRPIRRKPSMENRLRDDR 601

Query: 611 GNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGR-HVAPFAS 670
           G RR+RD  ANG DR DRSE+ Q  D        DGGN  +  +D FGGQG  HV PF S
Sbjct: 602 GGRRERDGRANGNDRNDRSEDQQRGD-------NDGGNPGEVGYDAFGGQGGVHVPPFLS 661

Query: 671 EI-PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP-PPFEGGGRNGRPGAQLGGSAP 712
           +I PPP+LMPVPGAGPLGPFVPAPPEVAM+M R+  GP PPFEG GR        GG AP
Sbjct: 662 DINPPPMLMPVPGAGPLGPFVPAPPEVAMQMFRDPSGPNPPFEGSGR--------GGPAP 720

[Close]

BLAST of Lsi06G004370 vs. ExPASy Swiss-Prot
Match: A4IFB1 (Serrate RNA effector molecule homolog OS=Bos taurus OX=9913 GN=SRRT PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.9e-06
Identity = 104/401 (25.94%), Postives = 144/401 (35.91%), Query Frame = 0


Query: 329 LDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWR 388
           L  E   EE  L GS       E    G+   + + R    +K      +LD LL YL  
Sbjct: 565 LIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVERDEKLIK------VLDKLLLYLRI 624

Query: 389 IHGLDYYGMVETREAK------GLRHVREEGKNSNMAVG-ADEWEKKLDLRWQERLRGQD 448
           +H LDYY   E           G+ HVR     + ++ G   EW+K     ++E+L    
Sbjct: 625 VHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQK----TFEEKL--TP 684

Query: 449 LLEVMTAKDKIEAAALESFDP------YVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHK 508
           LL V  +  + EA  +   DP      +V     E    K+ C   G  K F  PEFV K
Sbjct: 685 LLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFKGPEFVRK 744

Query: 509 HLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLK 568
           H+  KH E + E+    +E  +F N++ DA  P        +LP+ KP +          
Sbjct: 745 HIFNKHAEKIEEVK---KEVAFFNNFLTDAKRP--------ALPEIKPAQ---------- 804

Query: 569 DDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPF 628
                                                                     P 
Sbjct: 805 ---------------------------------------------------------PPG 864

Query: 629 ASEIPPPVL---MPVPGAGPLG--PF-VPAPPEV-----AMRMLREQGGPP----PFEGG 688
            ++I PP L   +P P   P G  P+  P PP +     A+R     GGPP    P+ G 
Sbjct: 865 PAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPY-GA 872

Query: 689 GRNGRPGAQLGGSAPILALSSGFRQDPRRIRSYQDLDAPED 702
           GR      +  G  P    +   R DPR I  Y+DLDAP+D
Sbjct: 925 GRGNYDAFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDD 872

[Close]

BLAST of Lsi06G004370 vs. ExPASy Swiss-Prot
Match: Q9BXP5 (Serrate RNA effector molecule homolog OS=Homo sapiens OX=9606 GN=SRRT PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.9e-06
Identity = 104/401 (25.94%), Postives = 144/401 (35.91%), Query Frame = 0


Query: 329 LDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWR 388
           L  E   EE  L GS       E    G+   + + R    +K      +LD LL YL  
Sbjct: 565 LIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVERDEKLIK------VLDKLLLYLRI 624

Query: 389 IHGLDYYGMVETREAK------GLRHVREEGKNSNMAVG-ADEWEKKLDLRWQERLRGQD 448
           +H LDYY   E           G+ HVR     + ++ G   EW+K     ++E+L    
Sbjct: 625 VHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQK----TFEEKL--TP 684

Query: 449 LLEVMTAKDKIEAAALESFDP------YVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHK 508
           LL V  +  + EA  +   DP      +V     E    K+ C   G  K F  PEFV K
Sbjct: 685 LLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFKGPEFVRK 744

Query: 509 HLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLK 568
           H+  KH E + E+    +E  +F N++ DA  P        +LP+ KP +          
Sbjct: 745 HIFNKHAEKIEEVK---KEVAFFNNFLTDAKRP--------ALPEIKPAQ---------- 804

Query: 569 DDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPF 628
                                                                     P 
Sbjct: 805 ---------------------------------------------------------PPG 864

Query: 629 ASEIPPPVL---MPVPGAGPLG--PF-VPAPPEV-----AMRMLREQGGPP----PFEGG 688
            ++I PP L   +P P   P G  P+  P PP +     A+R     GGPP    P+ G 
Sbjct: 865 PAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPY-GA 872

Query: 689 GRNGRPGAQLGGSAPILALSSGFRQDPRRIRSYQDLDAPED 702
           GR      +  G  P    +   R DPR I  Y+DLDAP+D
Sbjct: 925 GRGNYDAFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDD 872

[Close]

BLAST of Lsi06G004370 vs. ExPASy Swiss-Prot
Match: Q99MR6 (Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.9e-06
Identity = 104/401 (25.94%), Postives = 144/401 (35.91%), Query Frame = 0


Query: 329 LDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWR 388
           L  E   EE  L GS       E    G+   + + R    +K      +LD LL YL  
Sbjct: 564 LIEEVSAEEEELLGSSGGPPPEEPPKEGNPAEINVERDEKLIK------VLDKLLLYLRI 623

Query: 389 IHGLDYYGMVETREAK------GLRHVREEGKNSNMAVG-ADEWEKKLDLRWQERLRGQD 448
           +H LDYY   E           G+ HVR     + ++ G   EW+K     ++E+L    
Sbjct: 624 VHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQK----TFEEKL--TP 683

Query: 449 LLEVMTAKDKIEAAALESFDP------YVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHK 508
           LL V  +  + EA  +   DP      +V     E    K+ C   G  K F  PEFV K
Sbjct: 684 LLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFKGPEFVRK 743

Query: 509 HLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLK 568
           H+  KH E + E+    +E  +F N++ DA  P        +LP+ KP +          
Sbjct: 744 HIFNKHAEKIEEVK---KEVAFFNNFLTDAKRP--------ALPEIKPAQ---------- 803

Query: 569 DDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPF 628
                                                                     P 
Sbjct: 804 ---------------------------------------------------------PPG 863

Query: 629 ASEIPPPVL---MPVPGAGPLG--PF-VPAPPEV-----AMRMLREQGGPP----PFEGG 688
            ++I PP L   +P P   P G  P+  P PP +     A+R     GGPP    P+ G 
Sbjct: 864 PAQILPPGLTPGLPYPHQTPQGLMPYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPY-GA 871

Query: 689 GRNGRPGAQLGGSAPILALSSGFRQDPRRIRSYQDLDAPED 702
           GR      +  G  P    +   R DPR I  Y+DLDAP+D
Sbjct: 924 GRGNYDAFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDD 871

[Close]

BLAST of Lsi06G004370 vs. ExPASy TrEMBL
Match: A0A5D3CEZ5 (Serrate RNA effector molecule OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00360 PE=3 SV=1)

HSP 1 Score: 1323.9 bits (3425), Expect = 0.0e+00
Identity = 689/752 (91.62%), Postives = 699/752 (92.95%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQ+KSS+EQPHSSPP  P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQDKSSDEQPHSSPPSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVD+RP GRYIG
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDDRPLGRYIG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNAGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPGI 300
           ITTQKQAFFDSHKDEEW                RNELAQRTAKDFLLDLQSGTL+LGPGI
Sbjct: 241 ITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGI 300

Query: 301 NAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDI 360
           +AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQIDI
Sbjct: 301 SAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDI 360

Query: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420
            QAQALVRKLDSEKGIEENILSGSDSDKLGR+KAHGGSSGPVIIIRGLTTVKGLEGVELL
Sbjct: 361 GQAQALVRKLDSEKGIEENILSGSDSDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELL 420

Query: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRG 480
           DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLDLRWQERLRG
Sbjct: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMASGADEWEKKLDLRWQERLRG 480

Query: 481 QDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540
           QDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL
Sbjct: 481 QDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540

Query: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600
           KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG
Sbjct: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600

Query: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEI 660
           NRRDRDNWANGGDRFDRSENPQSSDF SANDGTDGGNIDDPMFD+FGGQGRHVAPFASEI
Sbjct: 601 NRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDGGNIDDPMFDSFGGQGRHVAPFASEI 660

Query: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILAL 712
           PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPILAL
Sbjct: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILAL 720

[Close]

BLAST of Lsi06G004370 vs. ExPASy TrEMBL
Match: A0A1S3BRT0 (serrate RNA effector molecule OS=Cucumis melo OX=3656 GN=LOC103492466 PE=3 SV=1)

HSP 1 Score: 1323.9 bits (3425), Expect = 0.0e+00
Identity = 689/752 (91.62%), Postives = 699/752 (92.95%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQ+KSS+EQPHSSPP  P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQDKSSDEQPHSSPPSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVD+RP GRYIG
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDDRPLGRYIG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNAGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPGI 300
           ITTQKQAFFDSHKDEEW                RNELAQRTAKDFLLDLQSGTL+LGPGI
Sbjct: 241 ITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGI 300

Query: 301 NAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDI 360
           +AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQIDI
Sbjct: 301 SAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDI 360

Query: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420
            QAQALVRKLDSEKGIEENILSGSDSDKLGR+KAHGGSSGPVIIIRGLTTVKGLEGVELL
Sbjct: 361 GQAQALVRKLDSEKGIEENILSGSDSDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELL 420

Query: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRG 480
           DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLDLRWQERLRG
Sbjct: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMASGADEWEKKLDLRWQERLRG 480

Query: 481 QDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540
           QDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL
Sbjct: 481 QDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540

Query: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600
           KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG
Sbjct: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600

Query: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEI 660
           NRRDRDNWANGGDRFDRSENPQSSDF SANDGTDGGNIDDPMFD+FGGQGRHVAPFASEI
Sbjct: 601 NRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDGGNIDDPMFDSFGGQGRHVAPFASEI 660

Query: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILAL 712
           PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPILAL
Sbjct: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILAL 720

[Close]

BLAST of Lsi06G004370 vs. ExPASy TrEMBL
Match: A0A5A7UN10 (Serrate RNA effector molecule OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00340 PE=3 SV=1)

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 688/777 (88.55%), Postives = 699/777 (89.96%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQ+KSS+EQPHSSPP  P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQDKSSDEQPHSSPPSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVD+RP GRYIG
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDDRPLGRYIG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNAGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW-----------------------------------------RN 300
           ITTQKQAFFDSHKDE+W                                         RN
Sbjct: 241 ITTQKQAFFDSHKDEDWYFLSFTSEFSFFLLFPLIHLFCLFRLRDKYHPTNLVTVIERRN 300

Query: 301 ELAQRTAKDFLLDLQSGTLELGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK 360
           ELAQRTAKDFLLDLQSGTL+LGPGI+AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK
Sbjct: 301 ELAQRTAKDFLLDLQSGTLDLGPGISAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK 360

Query: 361 EMDLISAAPKAHPVSSEQRRIQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAH 420
           EMDL+SAAPKAHPVSSE RRIQIDI QAQALVRKLDSEKGIEENILSGSDSDKLGR+KAH
Sbjct: 361 EMDLLSAAPKAHPVSSEPRRIQIDIGQAQALVRKLDSEKGIEENILSGSDSDKLGRDKAH 420

Query: 421 GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK 480
           GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK
Sbjct: 421 GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK 480

Query: 481 NSNMAVGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGW 540
           NSNMA GADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGW
Sbjct: 481 NSNMASGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGW 540

Query: 541 KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM 600
           KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM
Sbjct: 541 KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM 600

Query: 601 QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDG 660
           QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDF SANDGTDG
Sbjct: 601 QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDG 660

Query: 661 GNIDDPMFDTFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP 712
           GNIDDPMFD+FGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP
Sbjct: 661 GNIDDPMFDSFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP 720

[Close]

BLAST of Lsi06G004370 vs. ExPASy TrEMBL
Match: A0A6J1HAH6 (serrate RNA effector molecule-like OS=Cucurbita moschata OX=3662 GN=LOC111461600 PE=3 SV=1)

HSP 1 Score: 1289.6 bits (3336), Expect = 0.0e+00
Identity = 673/757 (88.90%), Postives = 691/757 (91.28%), Query Frame = 0


Query: 1   MAEVMNMAAA--ADESLDRRRDRQEKSSEEQPHSSPPPPP--AGAPPPPSRRRDRDERDR 60
           MAEVMNMAAA  ADESLDRRRD+QEKSSEEQPHSSPPP P  A APPPPSRRRDRDERDR
Sbjct: 1   MAEVMNMAAADTADESLDRRRDQQEKSSEEQPHSSPPPQPAAAAAPPPPSRRRDRDERDR 60

Query: 61  RDDRDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPR 120
           RDDRD+DRPPNRR DNYDRNRSPP++PPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPR
Sbjct: 61  RDDRDVDRPPNRRNDNYDRNRSPPTMPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPR 120

Query: 121 RSPPPPYKRSRRDD-GGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPP 180
           RSPPPP+KRSRRDD GGYDGRKGSPRGGFGPGDRRFGYDYGGGYERE+RGRPGYVDER  
Sbjct: 121 RSPPPPFKRSRRDDGGGYDGRKGSPRGGFGPGDRRFGYDYGGGYERELRGRPGYVDERSL 180

Query: 181 GRYIGRSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQE 240
           GRYIGRSSGGYQDWD SRGGHGD LNAG GQ                         RYQE
Sbjct: 181 GRYIGRSSGGYQDWDPSRGGHGDPLNAGAGQREGLMTYKQFIQELEDDILPAEAERRYQE 240

Query: 241 YKSEYITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLE 300
           YKSEYITTQKQ+FFDSHKDEEW                RNELAQRTAKDFL+DLQSGTLE
Sbjct: 241 YKSEYITTQKQSFFDSHKDEEWLKDKYHPTNLVTVIERRNELAQRTAKDFLIDLQSGTLE 300

Query: 301 LGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRR 360
           +GPGINAAATNKSGQ SEPNSDDEADNDGKRRRHGRGPAKEMD +SAAPKAHPVSSE RR
Sbjct: 301 VGPGINAAATNKSGQTSEPNSDDEADNDGKRRRHGRGPAKEMDFLSAAPKAHPVSSEPRR 360

Query: 361 IQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLE 420
           IQIDIEQAQ+LVRKLDSEKGIEENIL GSDSDKLGR++AHGGSSGPVIIIRGLTTVKGLE
Sbjct: 361 IQIDIEQAQSLVRKLDSEKGIEENILCGSDSDKLGRDRAHGGSSGPVIIIRGLTTVKGLE 420

Query: 421 GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQ 480
           GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLD RWQ
Sbjct: 421 GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDSRWQ 480

Query: 481 ERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH 540
           ERLRGQD LE MTAKDKIEAAAL +FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH
Sbjct: 481 ERLRGQDPLETMTAKDKIEAAALGAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH 540

Query: 541 KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRL 600
           KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLD RL
Sbjct: 541 KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDARL 600

Query: 601 KDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAP 660
           KDDRGNRRDRDNWANGGDRFDRSENPQS+DFQSANDGTDGGN+DDPMFDTFGGQGRHVAP
Sbjct: 601 KDDRGNRRDRDNWANGGDRFDRSENPQSNDFQSANDGTDGGNLDDPMFDTFGGQGRHVAP 660

Query: 661 FASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSA 712
           FASE+PPPVLMPVPGAGPLGPFVPAPPEVAMR+LREQGGPPPFEGGGRNGRPG QLGGSA
Sbjct: 661 FASEMPPPVLMPVPGAGPLGPFVPAPPEVAMRVLREQGGPPPFEGGGRNGRPGPQLGGSA 720

[Close]

BLAST of Lsi06G004370 vs. ExPASy TrEMBL
Match: A0A6J1JAF8 (serrate RNA effector molecule-like OS=Cucurbita maxima OX=3661 GN=LOC111485005 PE=3 SV=1)

HSP 1 Score: 1279.6 bits (3310), Expect = 0.0e+00
Identity = 668/754 (88.59%), Postives = 687/754 (91.11%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPP-PAGAPPPPSRRRDRDERDRRDD 60
           + ++M  A  ADESLDRRRD+QEKSSEEQPHSSPPP   A APPPPSRRRDRDERDRRDD
Sbjct: 37  LCKIMAAADTADESLDRRRDQQEKSSEEQPHSSPPPQLAAAAPPPPSRRRDRDERDRRDD 96

Query: 61  RDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSP 120
           RD+DRPPNRR DNYDRNRSPP+LPPRDRDRDRDRDYKRR+SLSPPPPYRDRRHSPPRRS 
Sbjct: 97  RDVDRPPNRRNDNYDRNRSPPTLPPRDRDRDRDRDYKRRNSLSPPPPYRDRRHSPPRRS- 156

Query: 121 PPPYKRSRRDD-GGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRY 180
           PPP+KRSRRDD GGYDGRKGSPRGGFGPGDRRFGYDYGGGYERE+RGRPGYVDER  GRY
Sbjct: 157 PPPFKRSRRDDGGGYDGRKGSPRGGFGPGDRRFGYDYGGGYERELRGRPGYVDERSLGRY 216

Query: 181 IGRSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKS 240
           IGRSSGGYQDWDSSRGGHGD LNAG GQ                         RYQEYKS
Sbjct: 217 IGRSSGGYQDWDSSRGGHGDPLNAGAGQREGLMTYKQFIQELEDDILPAEAEPRYQEYKS 276

Query: 241 EYITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGP 300
           EYITTQKQ+FFDSHKDEEW                RNELAQRTAKDFL+DLQSGTLELGP
Sbjct: 277 EYITTQKQSFFDSHKDEEWLKDKYHPTNLVTVIERRNELAQRTAKDFLIDLQSGTLELGP 336

Query: 301 GINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQI 360
           GINAAATNKSGQ SEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQI
Sbjct: 337 GINAAATNKSGQTSEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQI 396

Query: 361 DIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVE 420
           DIEQAQ+LVRKLDSEKGIEENIL GSDSDKLGR+KAHGGSSGPVIIIRGLTTVKGLEGVE
Sbjct: 397 DIEQAQSLVRKLDSEKGIEENILCGSDSDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVE 456

Query: 421 LLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERL 480
           LLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLD RWQERL
Sbjct: 457 LLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDSRWQERL 516

Query: 481 RGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHL 540
           RGQD LE MTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHL
Sbjct: 517 RGQDPLETMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHL 576

Query: 541 NLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDD 600
           NLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLD RLKDD
Sbjct: 577 NLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDARLKDD 636

Query: 601 RGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFAS 660
           RGNRRDRDNWANGGDRFDRSENPQS+DFQSANDG+DGGN+DDPMFDTFGGQGRHVAPFAS
Sbjct: 637 RGNRRDRDNWANGGDRFDRSENPQSNDFQSANDGSDGGNLDDPMFDTFGGQGRHVAPFAS 696

Query: 661 EIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPIL 712
           E+PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPIL
Sbjct: 697 EMPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPIL 756

[Close]

BLAST of Lsi06G004370 vs. NCBI nr
Match: XP_038878917.1 (serrate RNA effector molecule [Benincasa hispida])

HSP 1 Score: 1328.9 bits (3438), Expect = 0.0e+00
Identity = 691/752 (91.89%), Postives = 698/752 (92.82%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNMA AADESLDRRRDRQEKSSEEQPHSSPP  PA  PPPPSRRRDRDERDRRD+R
Sbjct: 1   MAEVMNMATAADESLDRRRDRQEKSSEEQPHSSPPSQPAVGPPPPSRRRDRDERDRRDER 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           DIDRPP RRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DIDRPPYRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERP GRY+G
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPLGRYMG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDSSRGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSSRGGHGDALNAGGGQREGLMTYKQFIQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPGI 300
           ITTQKQAFFDSHKDEEW                RNELAQRTAKDFLLDLQSGTL+LGPGI
Sbjct: 241 ITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGI 300

Query: 301 NAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDI 360
           NAAATNKSG ASEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQIDI
Sbjct: 301 NAAATNKSGHASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDI 360

Query: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420
           EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL
Sbjct: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420

Query: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRG 480
           DTLLTYLWRIHG+DYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLDLRWQERLRG
Sbjct: 421 DTLLTYLWRIHGVDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDLRWQERLRG 480

Query: 481 QDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540
           QDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL
Sbjct: 481 QDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540

Query: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600
           KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKP RRRMNLDGRLKDDRG
Sbjct: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPPRRRMNLDGRLKDDRG 600

Query: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEI 660
           NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGG IDDPMFDTFGGQGRHVAPFASEI
Sbjct: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGKIDDPMFDTFGGQGRHVAPFASEI 660

Query: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILAL 712
           PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPILAL
Sbjct: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILAL 720

[Close]

BLAST of Lsi06G004370 vs. NCBI nr
Match: XP_008451085.1 (PREDICTED: serrate RNA effector molecule [Cucumis melo] >TYK09920.1 serrate RNA effector molecule [Cucumis melo var. makuwa])

HSP 1 Score: 1323.9 bits (3425), Expect = 0.0e+00
Identity = 689/752 (91.62%), Postives = 699/752 (92.95%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQ+KSS+EQPHSSPP  P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQDKSSDEQPHSSPPSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVD+RP GRYIG
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDDRPLGRYIG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNAGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPGI 300
           ITTQKQAFFDSHKDEEW                RNELAQRTAKDFLLDLQSGTL+LGPGI
Sbjct: 241 ITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGI 300

Query: 301 NAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDI 360
           +AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQIDI
Sbjct: 301 SAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDI 360

Query: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420
            QAQALVRKLDSEKGIEENILSGSDSDKLGR+KAHGGSSGPVIIIRGLTTVKGLEGVELL
Sbjct: 361 GQAQALVRKLDSEKGIEENILSGSDSDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELL 420

Query: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRG 480
           DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLDLRWQERLRG
Sbjct: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMASGADEWEKKLDLRWQERLRG 480

Query: 481 QDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540
           QDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL
Sbjct: 481 QDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540

Query: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600
           KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG
Sbjct: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600

Query: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEI 660
           NRRDRDNWANGGDRFDRSENPQSSDF SANDGTDGGNIDDPMFD+FGGQGRHVAPFASEI
Sbjct: 601 NRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDGGNIDDPMFDSFGGQGRHVAPFASEI 660

Query: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILAL 712
           PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPILAL
Sbjct: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILAL 720

[Close]

BLAST of Lsi06G004370 vs. NCBI nr
Match: KAA0055666.1 (serrate RNA effector molecule [Cucumis melo var. makuwa])

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 688/777 (88.55%), Postives = 699/777 (89.96%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQ+KSS+EQPHSSPP  P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQDKSSDEQPHSSPPSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVD+RP GRYIG
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDDRPLGRYIG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALNAGGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNAGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW-----------------------------------------RN 300
           ITTQKQAFFDSHKDE+W                                         RN
Sbjct: 241 ITTQKQAFFDSHKDEDWYFLSFTSEFSFFLLFPLIHLFCLFRLRDKYHPTNLVTVIERRN 300

Query: 301 ELAQRTAKDFLLDLQSGTLELGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK 360
           ELAQRTAKDFLLDLQSGTL+LGPGI+AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK
Sbjct: 301 ELAQRTAKDFLLDLQSGTLDLGPGISAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAK 360

Query: 361 EMDLISAAPKAHPVSSEQRRIQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAH 420
           EMDL+SAAPKAHPVSSE RRIQIDI QAQALVRKLDSEKGIEENILSGSDSDKLGR+KAH
Sbjct: 361 EMDLLSAAPKAHPVSSEPRRIQIDIGQAQALVRKLDSEKGIEENILSGSDSDKLGRDKAH 420

Query: 421 GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK 480
           GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK
Sbjct: 421 GGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGK 480

Query: 481 NSNMAVGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGW 540
           NSNMA GADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGW
Sbjct: 481 NSNMASGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGW 540

Query: 541 KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM 600
           KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM
Sbjct: 541 KYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVM 600

Query: 601 QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDG 660
           QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDF SANDGTDG
Sbjct: 601 QQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDG 660

Query: 661 GNIDDPMFDTFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP 712
           GNIDDPMFD+FGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP
Sbjct: 661 GNIDDPMFDSFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP 720

[Close]

BLAST of Lsi06G004370 vs. NCBI nr
Match: XP_004144078.1 (serrate RNA effector molecule [Cucumis sativus] >KGN66722.2 hypothetical protein Csa_007340 [Cucumis sativus])

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 683/752 (90.82%), Postives = 696/752 (92.55%), Query Frame = 0


Query: 1   MAEVMNMAAAADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSRRRDRDERDRRDDR 60
           MAEVMNM AAADESLDRRRDRQEKSS+EQPHSSP   P  APPPPSRRRDRDERDRRDDR
Sbjct: 1   MAEVMNM-AAADESLDRRRDRQEKSSDEQPHSSPQSHPPAAPPPPSRRRDRDERDRRDDR 60

Query: 61  DIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120
           D DRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP
Sbjct: 61  DFDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPP 120

Query: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYIG 180
           PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERP GR++G
Sbjct: 121 PPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPMGRFMG 180

Query: 181 RSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSEY 240
           RSSGGYQDWDS+RGGHGDALN GGGQ                         RYQEYKSEY
Sbjct: 181 RSSGGYQDWDSNRGGHGDALNPGGGQREGLMTYKQFMQELEDDILPAEAERRYQEYKSEY 240

Query: 241 ITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPGI 300
           ITTQKQAFFDSHKDEEW                RNELAQRTAKDFLLDLQSGTL+LGPGI
Sbjct: 241 ITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLDLGPGI 300

Query: 301 NAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQIDI 360
           +AAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDL+SAAPKAHPVSSE RRIQIDI
Sbjct: 301 SAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDI 360

Query: 361 EQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELL 420
            QAQALVRKLDSEKGIEENILSGSD+DKLGR+KAHGGSSGPVIIIRGLTTVKGLEGVELL
Sbjct: 361 GQAQALVRKLDSEKGIEENILSGSDNDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELL 420

Query: 421 DTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLRG 480
           DTLLTYLWRIHG+DYYGMVETREAKGLRHVREEGK+SNMA GADEWEKKLDLRWQERLRG
Sbjct: 421 DTLLTYLWRIHGIDYYGMVETREAKGLRHVREEGKSSNMAGGADEWEKKLDLRWQERLRG 480

Query: 481 QDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540
           QDLLEVMTAKDKIEAAALE+FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL
Sbjct: 481 QDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNL 540

Query: 541 KHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600
           KHPELVMELTSKVREELYFQNYMND DAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG
Sbjct: 541 KHPELVMELTSKVREELYFQNYMNDTDAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRG 600

Query: 601 NRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEI 660
           NRRDRDNWANGGDRFDRSENPQSSDF SANDGTDGGNIDDPMFD+FGGQGRHVAPFASEI
Sbjct: 601 NRRDRDNWANGGDRFDRSENPQSSDFPSANDGTDGGNIDDPMFDSFGGQGRHVAPFASEI 660

Query: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSAPILAL 712
           PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSAPILAL
Sbjct: 661 PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILAL 720

[Close]

BLAST of Lsi06G004370 vs. NCBI nr
Match: XP_023516039.1 (serrate RNA effector molecule-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1292.3 bits (3343), Expect = 0.0e+00
Identity = 676/757 (89.30%), Postives = 692/757 (91.41%), Query Frame = 0


Query: 1   MAEVMNMAAA--ADESLDRRRDRQEKSSEEQPHSSPPPPP--AGAPPPPSRRRDRDERDR 60
           MAEVMNMAAA  ADESLDRRRD+QEKSSEEQPHSSPPP P  A APPPPSRRRDRDERDR
Sbjct: 1   MAEVMNMAAADTADESLDRRRDQQEKSSEEQPHSSPPPQPAAAAAPPPPSRRRDRDERDR 60

Query: 61  RDDRDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPR 120
           RDDRD+DRPPNRR DNYDRNRSPP+LPPRDRDRDRDRDYKRR+SLSPPPPYRDRRHSPPR
Sbjct: 61  RDDRDVDRPPNRRNDNYDRNRSPPTLPPRDRDRDRDRDYKRRNSLSPPPPYRDRRHSPPR 120

Query: 121 RSPPPPYKRSRRDD-GGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPP 180
           RSPPPP+KRSRRDD GGYDGRKGSPRGGFGPGDRRFGYDYGGGYERE+RGRPGYVDER  
Sbjct: 121 RSPPPPFKRSRRDDGGGYDGRKGSPRGGFGPGDRRFGYDYGGGYERELRGRPGYVDERSL 180

Query: 181 GRYIGRSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQE 240
           GRYIGRSSGGYQDWDSSRGGHGD LNAG GQ                         RYQE
Sbjct: 181 GRYIGRSSGGYQDWDSSRGGHGDPLNAGAGQREGLMTYKQFIQELEDDILPAEAERRYQE 240

Query: 241 YKSEYITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLE 300
           YKSEYITTQKQ+FFDSHKDEEW                RNELAQRTAKDFL+DLQSGTLE
Sbjct: 241 YKSEYITTQKQSFFDSHKDEEWLKDKYHPTNLVTVIERRNELAQRTAKDFLIDLQSGTLE 300

Query: 301 LGPGINAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRR 360
           LGPGINAAATNKSGQ SEPNSDDEADNDGKRR HGRGPAKEMDL+SAAPKAHPVSSE RR
Sbjct: 301 LGPGINAAATNKSGQTSEPNSDDEADNDGKRRCHGRGPAKEMDLLSAAPKAHPVSSEPRR 360

Query: 361 IQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLE 420
           IQIDIEQAQ+LVRKLDSEKGIEENIL GSDSDKLGR++AHGGSSGPVIIIRGLTTVKGLE
Sbjct: 361 IQIDIEQAQSLVRKLDSEKGIEENILCGSDSDKLGRDRAHGGSSGPVIIIRGLTTVKGLE 420

Query: 421 GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQ 480
           GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMA GADEWEKKLD RWQ
Sbjct: 421 GVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDSRWQ 480

Query: 481 ERLRGQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH 540
           ERLRGQD LE MTAKDKIEAAAL +FDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH
Sbjct: 481 ERLRGQDPLETMTAKDKIEAAALGAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVH 540

Query: 541 KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRL 600
           KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLD RL
Sbjct: 541 KHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDARL 600

Query: 601 KDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGRHVAP 660
           KDDRGNRRDRDNWANGGDRFDRSENPQS+DFQSANDGTDGGN+DDPMFDTFGGQGRHVAP
Sbjct: 601 KDDRGNRRDRDNWANGGDRFDRSENPQSNDFQSANDGTDGGNLDDPMFDTFGGQGRHVAP 660

Query: 661 FASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGAQLGGSA 712
           FASE+PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPG QLGGSA
Sbjct: 661 FASEMPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSA 720

[Close]

BLAST of Lsi06G004370 vs. TAIR 10
Match: AT2G27100.1 (C2H2 zinc-finger protein SERRATE (SE) )

HSP 1 Score: 820.8 bits (2119), Expect = 8.2e-238
Identity = 476/756 (62.96%), Postives = 549/756 (72.62%), Query Frame = 0


Query: 11  ADESLDRRRDRQEKSSEEQPHSSPPPPPAGAPPPPSR----------RRDRDERDRRDDR 70
           AD +L        +  E+   SSPPPPP  +  P             RR+RD R+RRD+R
Sbjct: 2   ADVNLPPSDSVDNRLPEKSTSSSPPPPPPSSSLPQQEQEQDQQQLPLRRERDSRERRDER 61

Query: 71  DIDR-PPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSP 130
           DI+R PPNRR    +R+RSP   PPR       RDYKRR SLSPPPPYRDRRHSPP+R  
Sbjct: 62  DIERPPPNRR----ERDRSPLP-PPR-------RDYKRRPSLSPPPPYRDRRHSPPQRR- 121

Query: 131 PPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPPGRYI 190
            PP KR RRDD GYDGR+GSPRGG+GP DRRFGYD+GGGY+REM GRPGY DERP GR++
Sbjct: 122 SPPQKRYRRDDNGYDGRRGSPRGGYGPPDRRFGYDHGGGYDREMGGRPGYGDERPHGRFM 181

Query: 191 GRSSGGYQDWDSSRGGHGDALNAGGGQ-------------------------RYQEYKSE 250
           GR    YQDW+  RGG+GDA N+G  Q                         RYQEYKSE
Sbjct: 182 GR----YQDWEGGRGGYGDASNSGNPQRDGLMSYKQFIQELEDDILPSEAERRYQEYKSE 241

Query: 251 YITTQKQAFFDSHKDEEW----------------RNELAQRTAKDFLLDLQSGTLELGPG 310
           YITTQK+AFF++HK+E+W                RN+LAQ+ AKDFLLDLQSGTL+LGP 
Sbjct: 242 YITTQKRAFFNTHKEEDWLKNKYHPTNLLSVIERRNDLAQKVAKDFLLDLQSGTLDLGPA 301

Query: 311 INAAATNKSGQASEPNSDDEADNDGKRRRHGRGPAKEMDLISAAPKAHPVSSEQRRIQID 370
           +   A NKSG+ SEPNS+DEA   GKR+RHG G AKE +L+SAAPKA   +S+ +RI  D
Sbjct: 302 V--TALNKSGRTSEPNSEDEAAGVGKRKRHGMGGAKENELLSAAPKAPSFTSDPKRILTD 361

Query: 371 IEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVEL 430
           +EQ QALVRKLDSEK IEEN+L GS+++K GREK H GS+GPV+IIRGLT+VKGLEGVEL
Sbjct: 362 VEQTQALVRKLDSEKKIEENVLQGSETEKSGREKLHSGSTGPVVIIRGLTSVKGLEGVEL 421

Query: 431 LDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAVGADEWEKKLDLRWQERLR 490
           LDTL+TYLWR+HGLDYYG VET EAKGLRHVR EGK S+     DE E K D  WQERL+
Sbjct: 422 LDTLVTYLWRVHGLDYYGKVETNEAKGLRHVRAEGKVSD--AKGDENESKFDSHWQERLK 481

Query: 491 GQDLLEVMTAKDKIEAAALESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLN 550
           GQD LEVM AK+KI+AAA E+ DP+VRKIRDEKYGWKYGCGAKGCTKLFHA EFV+KHL 
Sbjct: 482 GQDPLEVMAAKEKIDAAATEALDPHVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLK 541

Query: 551 LKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDR 610
           LKH ELV ELT+KVREELYFQNYMND +APGG P  QQS P+D+P RR+ +++ RL+DDR
Sbjct: 542 LKHTELVTELTTKVREELYFQNYMNDPNAPGGQPATQQSGPRDRPIRRKPSMENRLRDDR 601

Query: 611 GNRRDRDNWANGGDRFDRSENPQSSDFQSANDGTDGGNIDDPMFDTFGGQGR-HVAPFAS 670
           G RR+RD  ANG DR DRSE+ Q  D        DGGN  +  +D FGGQG  HV PF S
Sbjct: 602 GGRRERDGRANGNDRNDRSEDQQRGD-------NDGGNPGEVGYDAFGGQGGVHVPPFLS 661

Query: 671 EI-PPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGP-PPFEGGGRNGRPGAQLGGSAP 712
           +I PPP+LMPVPGAGPLGPFVPAPPEVAM+M R+  GP PPFEG GR        GG AP
Sbjct: 662 DINPPPMLMPVPGAGPLGPFVPAPPEVAMQMFRDPSGPNPPFEGSGR--------GGPAP 720

The following BLAST results are available for this feature:

BLAST of Lsi06G004370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVD0	1.2e-236	62.96	Serrate RNA effector molecule OS=Arabidopsis thaliana OX=3702 GN=SE PE=1 SV=2	[more]
A4IFB1	2.9e-06	25.94	Serrate RNA effector molecule homolog OS=Bos taurus OX=9913 GN=SRRT PE=2 SV=1	[more]
Q9BXP5	2.9e-06	25.94	Serrate RNA effector molecule homolog OS=Homo sapiens OX=9606 GN=SRRT PE=1 SV=1	[more]
Q99MR6	2.9e-06	25.94	Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1	[more]

BLAST of Lsi06G004370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CEZ5	0.0e+00	91.62	Serrate RNA effector molecule OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BRT0	0.0e+00	91.62	serrate RNA effector molecule OS=Cucumis melo OX=3656 GN=LOC103492466 PE=3 SV=1	[more]
A0A5A7UN10	0.0e+00	88.55	Serrate RNA effector molecule OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A6J1HAH6	0.0e+00	88.90	serrate RNA effector molecule-like OS=Cucurbita moschata OX=3662 GN=LOC111461600...	[more]
A0A6J1JAF8	0.0e+00	88.59	serrate RNA effector molecule-like OS=Cucurbita maxima OX=3661 GN=LOC111485005 P...	[more]

BLAST of Lsi06G004370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878917.1	0.0e+00	91.89	serrate RNA effector molecule [Benincasa hispida]	[more]
XP_008451085.1	0.0e+00	91.62	PREDICTED: serrate RNA effector molecule [Cucumis melo] >TYK09920.1 serrate RNA ...	[more]
KAA0055666.1	0.0e+00	88.55	serrate RNA effector molecule [Cucumis melo var. makuwa]	[more]
XP_004144078.1	0.0e+00	90.82	serrate RNA effector molecule [Cucumis sativus] >KGN66722.2 hypothetical protein...	[more]
XP_023516039.1	0.0e+00	89.30	serrate RNA effector molecule-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi06G004370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27100.1	8.2e-238	62.96	C2H2 zinc-finger protein SERRATE (SE)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 312..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 523..609
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 540..572
None	No IPR available	PANTHER	PTHR13165:SF3	SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN	coord: 198..711
None	No IPR available	PANTHER	PTHR13165:SF3	SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN	coord: 1..191
IPR007042	SERRATE/Ars2 , C-terminal	PFAM	PF04959	ARS2	coord: 411..614 e-value: 4.0E-41 score: 141.4
IPR039727	SERRATE/Ars2	PANTHER	PTHR13165	ARSENITE-RESISTANCE PROTEIN 2	coord: 198..711
IPR039727	SERRATE/Ars2	PANTHER	PTHR13165	ARSENITE-RESISTANCE PROTEIN 2	coord: 1..191
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 478..501

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G004370.1	Lsi06G004370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus