Lsi05G009230.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G009230.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	transcription factor bHLH69-like
Location	chr05: 16390963 .. 16394960 (+)
Sequence length	1354
RNA-Seq Expression	Lsi05G009230.1
Synteny	Lsi05G009230.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGAATGAGAATGCGTATGATATGTGAAAAATACTGGAGCTGCACGTACAGCTACAAACATCACCGTCGCTCCCTCCACTCTCTCTGCTTCATCCTCCTGGTTTCACCATTGTTATCCGTGAGATCCCTTTCTCTCTGTTTATCCTCCATAGTTTCAGCAACATTAACGTTATTTTCTTTGTTCGTAACCTTACCATTCTAATAACTACTACCATTACCAACATGTGTTTTTATTTTCTTTTAAACATTGTCGATGATGAAGTTGGATTGAAACGTAGTTATATGGAGCTTGACTTTGCATATTATCCCCAACTTTCTCGTGGTTCAATCAGATTAGCATTTTGTTTTCTTTTTTCTCTCTAGACTGTAGTTGTTATGTTATGAGGCTTTATGTTCTTCGTTTTCCCGATCGAGGAATTTTAGAAAATTTGAAGTCCCTTCGCTTCAGTTCTACTTCTACTTGATTTTCTATTTTCTTCAAGCTTTTGTGCTCCCATATTGCTATTTATCGGTGCCTTTGTTTCTGGTAGCTTCTTTTACTTTATTTATCAGTCCACTTCTTCTTTTGTCATGTAAACCCTGGAATACTTTTTCTAGTTAGTACTTCTTAACATACTATTTTCAAAGAAATGGAAGATATGGGGAAATGCTCATTTCATATGCTAGTATGCCGATGGATTTTCAAATATCTATTGGGTGTGCTCGGTAAATCAATATATGTCTTAGGTGAGATGTTGTATGTTCAACTTTCTAAGAACAGTTGATTGAATTAGGTGGAATACTTAAGCGTCCAGGAATTTCAATTTATGTTTCTGATATATATCTTCTTAAAGGAGCTACTTAGTTAATATGTTAAACATGTTTGAGAGTGATTTTGAAGTGGTTAAATCATCTTTTTCATGTCTAAAATCACTCCTAATATGAGTTTTAATCATTTAAAAGCTTTTGATGGTAAGTGAATTGCATTTAAAAGCTTTTAAAAGTCTAAAACCAAACACTAAAATAGTTTTGAATGATTATTTTAAATACATGTTTTAGAAGTTACTTTGCACATGAAAAAATTCAAAGTGATTTTAACCATTTCAAATCACTCCCAAACATACCTTTTATTTCCCTTCAAGATTTCTGTAATCGAGTATTAGTTTCCCTCAATTACTCTAACAACGGTGACTTCAGATGATCCTTTCTTCTAGGCTTGTATTTTATTTTTGAGTTGATTTGGCATTTTGGAGCATCTTTAGCTTATTCTAAGCAGGTTTTAGCTTCTATTATTGTCGTTAAGTATTTCAGTTTATCACAATGCAGGGAAAATGGAAGGACAAAATGGCTGCAATAACTCTGTACGAATGCTCTCTCTGAACTTTGGTGCGAATGTCAACATTGTTTCCCAAGGACCTGGTGATTCTACAAACTATCACCATGTTTTGCCTGCTGATAGGAGTGTAAACCAAACTGATTTCCCCCACTTAACTGAGTGGACTCAAACTGCAAAAACGTCTCCGGCCTTTGTTGAGTTTATTGCTGAAACTTCAAAGTTTCCTCGAAAGGCATCAACAAAAGATGTGATAGCAGTTGTACCTAGTACTGTTCAAACTATTAATGGAGTCTCAGAGATTCGTGGCGAGATTTCATACAATCATCTCGCAGGTTCATACAGTTCAAAGCCTACTGATTCACGGGTAAGCCAATTTGTGCCAATCCTAACACATATGCAAAAGTTATGAGGGTCACTGCGCTGAAGTCAATAATAGATCTTTTAAATATAAGGATGTAGGCATATATCACCTCAAGTTCATTGCTTTCAGTTTTGAACACAATGTATGTTAACATATTTGTTTGTTAATCAATAGTCATTTCTCAATGACTCAATTATCTGGATTTTTCAAGTTATCCTAATTTGCGGTTTTTGGATCAGAACAATGCACCTGGTATTCAATCCAAATCACGTTCCAGTTCATCAAGTCGACGAGGGTATTCAGCTGATCGTGTAAGCCAAACACCTTTCTAGTTGCAACCAAAAACTTTTCTACTACTATAGGAAAGAGCAGAAATATGACGCCATGAGTGTGAATTGTGAAATATACACAAACCTATATTATTTAATCAGCCAAAGTAGCAGGACTGGATGGATGTGATCCCTTGGGGCCAATTTAACTTGTTTAATATGCTTTCTTATTCCAGCAACGCAGGATAAGGATAGCTGAAAGACTTGAAGCATTGCAGGAACTTCTTCCTCAGTCTTCAAAGGTAAAATTCTGTGTCATTATGCCATAGATAGGCATGAACTTGTATGAAGGGATAAGTGCAGAAGCAGAATTCCAAAATATCTTCAAAGCACTAACTTGACTTGAAACCGTTCCAATATTTATCATTATACAAATGCATTGAGTAAACATGATTGAGCCGTTTTGCTGTCGTAAATTTTCCTGAATTTTATTGAGGATAAAAGTAACTGAAAGCATTATCTTTTGAACTTTCCATTTCTTGACCTGCAGTATAGGCTAGCTAAGTATCTTCTTTAAATCCACTATAATTTTGGTTTCTGAAGGGAAATCAGGCATCTGCTCTAGATGATGTCATTGACCATATCAAGTACTTACAGCTTCAAATAAAGGTAGGCAGCCTACCGCTTATTGCTTTGCACGTTTCTTTATATGGCACTTTACAGCTTGTTGAAAATTTGATCCATATGTTGGTAAGAGTTTGTTTGTAGCTTGTTGGCTTCATCGGTCTTCATAACCCGCAGGTTGCAGTTTGAAACGATGTTGGTGAGGGAAAGAAAGAGGTCCATATGTTGGCAATATTGATAAAAATTTGGCTTAACAAGCCCGTAATAGTGGTGATGTTGTTTGTCATGTCATATCTGCATCTAATTTCTCAAACCATATGACCCTTGATCCAAAATATTGGAGACTTGTAAAGAGATATAGTAAGCTAGTACCAAAAATTGAGGCATGATCTTGAGCAATAACTATAAAGGGTTAGCGGTATTGTCTTTTGCTTCGTAGAGTCACCGAAAGACCATCATCATCTATTGCAACGAGGCAGACATCATTGGATGGATGACCAAACAAATTTGATAAAATTTAAGACGGTTGTTTACTATATTTTTGTGGTAGATTCGTAGTTATAATGAATAAATGTTTCTACAAACAGACGAATACTTTGAAATGGCCCGACTGTAATGATGTTGCAAGTGAAGTTGCTAAAAAAAAACTGATGTTATGAATGTAGAAGAAACTAAGACATCCATGTGTGGTTGCGCAGGACTTTAGTCAGAGCAAACTAGGAGGAGAATCATCTTCTGAGCCTTTCATATTCGTTGAGGTATCATCACTTGCTTGATTTTAACATTTCACTTTTTTCTTTTGGAATGTTCATGCAATACTCATTTATGGCTTTCTACTGTTCTTTCCATATTTCGAAATTTTGGGATGGAAAATAGAAGCTCCTTTATTATTGCTTTTGATAGGGATATGGTCATTACATGAGTCATCAAGAGATGCAGAGCGAGCCACTTGAGGAGATGGTGGGAAAATTGCTGGAAGTTGACCCATTAGCTGCAGCTCAGCTGCTGGAGAACCAGGGTCTATTTGTGATGCCCATGGATTTTGTTGAAGGATTATGCTGAAGCATATATTCACCCATGGACATTCCTGTATGCAACAATTGTTTCTCTGTTAATACTTCTGCTTCATTAAGTCTCTTCGGTTTGTTAATCACCTGAAAGAAAAGGTACCTGAGTAACGCTGAAAAAGGATAGTTTTGTTTGTCCATAGCATATAGTTAGAAGTTGAAAAGCCTATACAAGGGAGGTGGGGGAGGAATATCATGTCTGTAAACTGATCAAACATGCATTACTTGTCATATGTCCTAAACTTAGCTTGTATCAGGTATGCATTAAGAAGCTAGAGAAGCTAGAGTATGAATCCAAAGCTTTCCTACATTTTAAAAAGGGACCATCTTGGTCTCTTCATTTTCAAAACATATTATTTT

mRNA sequence

AAGAGAATGAGAATGCGTATGATATGTGAAAAATACTGGAGCTGCACGTACAGCTACAAACATCACCGTCGCTCCCTCCACTCTCTCTGCTTCATCCTCCTGGTTTCACCATTGTTATCCGGAAAATGGAAGGACAAAATGGCTGCAATAACTCTGTACGAATGCTCTCTCTGAACTTTGGTGCGAATGTCAACATTGTTTCCCAAGGACCTGGTGATTCTACAAACTATCACCATGTTTTGCCTGCTGATAGGAGTGTAAACCAAACTGATTTCCCCCACTTAACTGAGTGGACTCAAACTGCAAAAACGTCTCCGGCCTTTGTTGAGTTTATTGCTGAAACTTCAAAGTTTCCTCGAAAGGCATCAACAAAAGATGTGATAGCAGTTGTACCTAGTACTGTTCAAACTATTAATGGAGTCTCAGAGATTCGTGGCGAGATTTCATACAATCATCTCGCAGGTTCATACAGTTCAAAGCCTACTGATTCACGGAACAATGCACCTGGTATTCAATCCAAATCACGTTCCAGTTCATCAAGTCGACGAGGGTATTCAGCTGATCGTCAACGCAGGATAAGGATAGCTGAAAGACTTGAAGCATTGCAGGAACTTCTTCCTCAGTCTTCAAAGGCATCTGCTCTAGATGATGTCATTGACCATATCAAGTACTTACAGCTTCAAATAAAGGTAGGCAGCCTACCGCTTATTGCTTTGCACGTTTCTTTATATGGCACTTTACAGCTTGTTGAAAATTTGATCCATATGTTGGACTTTAGTCAGAGCAAACTAGGAGGAGAATCATCTTCTGAGCCTTTCATATTCGTTGAGGGATATGGTCATTACATGAGTCATCAAGAGATGCAGAGCGAGCCACTTGAGGAGATGGTGGGAAAATTGCTGGAAGTTGACCCATTAGCTGCAGCTCAGCTGCTGGAGAACCAGGGTCTATTTGTGATGCCCATGGATTTTGTTGAAGGATTATGCTGAAGCATATATTCACCCATGGACATTCCTGTATGCAACAATTGTTTCTCTGTTAATACTTCTGCTTCATTAAGTCTCTTCGGTTTGTTAATCACCTGAAAGAAAAGGTACCTGAGTAACGCTGAAAAAGGATAGTTTTGTTTGTCCATAGCATATAGTTAGAAGTTGAAAAGCCTATACAAGGGAGGTGGGGGAGGAATATCATGTCTGTAAACTGATCAAACATGCATTACTTGTCATATGTCCTAAACTTAGCTTGTATCAGGTATGCATTAAGAAGCTAGAGAAGCTAGAGTATGAATCCAAAGCTTTCCTACATTTTAAAAAGGGACCATCTTGGTCTCTTCATTTTCAAAACATATTATTTT

Coding sequence (CDS)

ATGGAAGGACAAAATGGCTGCAATAACTCTGTACGAATGCTCTCTCTGAACTTTGGTGCGAATGTCAACATTGTTTCCCAAGGACCTGGTGATTCTACAAACTATCACCATGTTTTGCCTGCTGATAGGAGTGTAAACCAAACTGATTTCCCCCACTTAACTGAGTGGACTCAAACTGCAAAAACGTCTCCGGCCTTTGTTGAGTTTATTGCTGAAACTTCAAAGTTTCCTCGAAAGGCATCAACAAAAGATGTGATAGCAGTTGTACCTAGTACTGTTCAAACTATTAATGGAGTCTCAGAGATTCGTGGCGAGATTTCATACAATCATCTCGCAGGTTCATACAGTTCAAAGCCTACTGATTCACGGAACAATGCACCTGGTATTCAATCCAAATCACGTTCCAGTTCATCAAGTCGACGAGGGTATTCAGCTGATCGTCAACGCAGGATAAGGATAGCTGAAAGACTTGAAGCATTGCAGGAACTTCTTCCTCAGTCTTCAAAGGCATCTGCTCTAGATGATGTCATTGACCATATCAAGTACTTACAGCTTCAAATAAAGGTAGGCAGCCTACCGCTTATTGCTTTGCACGTTTCTTTATATGGCACTTTACAGCTTGTTGAAAATTTGATCCATATGTTGGACTTTAGTCAGAGCAAACTAGGAGGAGAATCATCTTCTGAGCCTTTCATATTCGTTGAGGGATATGGTCATTACATGAGTCATCAAGAGATGCAGAGCGAGCCACTTGAGGAGATGGTGGGAAAATTGCTGGAAGTTGACCCATTAGCTGCAGCTCAGCTGCTGGAGAACCAGGGTCTATTTGTGATGCCCATGGATTTTGTTGAAGGATTATGCTGA

Protein sequence

MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTAKTSPAFVEFIAETSKFPRKASTKDVIAVVPSTVQTINGVSEIRGEISYNHLAGSYSSKPTDSRNNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQSSKASALDDVIDHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGYGHYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC

Homology

[Close]

BLAST of Lsi05G009230.1 vs. ExPASy Swiss-Prot
Match: Q8S3D5 (Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 8.8e-10
Identity = 79/279 (28.32%), Postives = 126/279 (45.16%), Query Frame = 0


Query: 29  PGDSTNYHHVLPADRSVNQTDFPH----LTEWTQTA--KTSPAFVEFIAETSKFPRKAST 88
           P  S + H   PA  + +  DF H     T W  +    T P   +    T      A +
Sbjct: 9   PSSSPSPHLQSPA--TFDHDDFLHHIFSSTPWPSSVLDDTPPPTSDCAPVTGFHHHDADS 68

Query: 89  KDVIAVVPSTVQ-----TINGVSEIRGEISYNHLAGSYSSKPTDSRNNAPG------IQS 148
           ++ I ++P +         NG S   G + ++   GS     T S+  A         Q 
Sbjct: 69  RNQITMIPLSHNHPNDALFNGFS--TGSLPFHLPQGSGGQTQTQSQATASATTGGATAQP 128

Query: 149 KSRSSSSSRRGYS------ADRQRRIRIAERLEALQELLP---QSSKASALDDVIDHIKY 208
           +++    +RRG +      A+R RR RIAER+++LQEL+P   ++ KAS LD++ID++K+
Sbjct: 129 QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKF 188

Query: 209 LQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVE-GYGHYM 268
           LQLQ+KV                            S S+LGG +S+   I  + G  H  
Sbjct: 189 LQLQVKV---------------------------LSMSRLGGAASASSQISEDAGGSHEN 248

Query: 269 SHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPM 281
           +    +++  E  V KL+E D  +A Q L+ +GL +MP+
Sbjct: 249 TSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPI 256

[Close]

BLAST of Lsi05G009230.1 vs. ExPASy Swiss-Prot
Match: Q9ZUG9 (Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-09
Identity = 61/183 (33.33%), Postives = 92/183 (50.27%), Query Frame = 0


Query: 117 SKPTDSRNNAPG----IQSKSRSSSSSRRGYS------ADRQRRIRIAERLEALQELLP- 176
           ++P  S + A G       +SR+   +RRG +      A+R RR RIAER++ALQEL+P 
Sbjct: 114 TQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPN 173

Query: 177 --QSSKASALDDVIDHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLG 236
             ++ KAS LD++ID++K+LQLQ+KV       L +S  G    V + I       S+ G
Sbjct: 174 GNKTDKASMLDEIIDYVKFLQLQVKV-------LSMSRLGGAASVSSQI-------SEAG 233

Query: 237 GESSSEPFIFVEGYGHYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFV 287
           G   +     V G      +        E  V KL+E D  +A Q L+ +GL +MP+   
Sbjct: 234 GSHGNASSAMVGG-SQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLA 281

[Close]

BLAST of Lsi05G009230.1 vs. ExPASy Swiss-Prot
Match: Q9LSQ3 (Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.7e-09
Identity = 58/178 (32.58%), Postives = 95/178 (53.37%), Query Frame = 0


Query: 120 TDSRNNAPGIQSKSRSSSSSRRGYS------ADRQRRIRIAERLEALQELLP---QSSKA 179
           T S  +AP ++ K R    +RRG +      A+R RR RIAER+++LQEL+P   ++ KA
Sbjct: 84  TVSTTSAPVVRQKPR--VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKA 143

Query: 180 SALDDVIDHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGG--ESSS 239
           S LD++I+++++LQLQ+KV       L +S  G    V   ++ L    ++ GG   + +
Sbjct: 144 SMLDEIIEYVRFLQLQVKV-------LSMSRLGGAGSVGPRLNGL---SAEAGGRLNALT 203

Query: 240 EPFIFVEGYGHYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGL 287
            P   + G G+            E+ V KL+E D  +A Q L+ +GL +MP+     +
Sbjct: 204 APCNGLNGNGNATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 249

[Close]

BLAST of Lsi05G009230.1 vs. ExPASy Swiss-Prot
Match: D0PX88 (bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.3e-08
Identity = 60/199 (30.15%), Postives = 93/199 (46.73%), Query Frame = 0


Query: 105 EISYNHLAGSYSSKPTDSRNNAPGIQSKSRSSSSSRRGYS------ADRQRRIRIAERLE 164
           +I   +   +  + P        G Q +++    +RRG +      A+R RR RIAER++
Sbjct: 142 QIQGQNFGATNQAPPASGSAGGGGNQGQAKPRVRARRGQATDPHSIAERLRRERIAERMK 201

Query: 165 ALQELLP---QSSKASALDDVIDHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHML 224
           ALQEL+P   ++ KAS LD++ID++K+LQLQ+KV       L +S  G    V  L+   
Sbjct: 202 ALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV-------LSMSRLGGAAAVAPLV--A 261

Query: 225 DFSQSKLGGESSSEPFIFVEGYGHYMSHQEMQSEP--------LEEMVGKLLEVDPLAAA 284
           D S    GG    +      G G  +      +           E  V KL+E D  +A 
Sbjct: 262 DISSEGGGGGGGGD--CVTNGAGGVLPRSTTTAASTTNDSLTMTEHQVAKLMEEDMGSAM 321

Query: 285 QLLENQGLFVMPMDFVEGL 287
           Q L+ +GL +MP+     +
Sbjct: 322 QYLQGKGLCLMPISLATAI 329

[Close]

BLAST of Lsi05G009230.1 vs. ExPASy Swiss-Prot
Match: O22768 (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 5.3e-07
Identity = 53/165 (32.12%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 125 NAPGIQSKSRSSSSSRRGYS------ADRQRRIRIAERLEALQELLP---QSSKASALDD 184
           +AP   +  R    +RRG +      A+R RR RIAER+ ALQEL+P   ++ +A+ +D+
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDE 193

Query: 185 VIDHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVE 244
           ++D++K+L+LQ+KV       L +S  G    V  L+  +  S       SS E      
Sbjct: 194 IVDYVKFLRLQVKV-------LSMSRLGGAGAVAPLVTDMPLS-------SSVEDETGEG 253

Query: 245 GYGHYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPM 281
           G     + ++  ++  E  V KL+E +  AA QLL+++ L +MP+
Sbjct: 254 GRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPI 284

[Close]

BLAST of Lsi05G009230.1 vs. ExPASy TrEMBL
Match: A0A0A0KHM8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G409980 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 7.5e-113
Identity = 227/289 (78.55%), Postives = 242/289 (83.74%), Query Frame = 0


Query: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTA 60
           MEGQNGCNNSVRMLSL+FGANVNIVSQ P D TN+HHVLPADR+VNQT+ PHLTEWTQ A
Sbjct: 45  MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAA 104

Query: 61  KTSPAFVEFIAETSKFPRKASTKDVIAVVPSTVQTINGVSEIRGEISYNHLAGSYSSKPT 120
           KTSPAFVEFIAETS F RK STKDVIAVVPSTVQTINGVSE+RG+ISYNHLAGSY+SK T
Sbjct: 105 KTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVSELRGKISYNHLAGSYNSKST 164

Query: 121 DSRNNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQS--SKASALDDVID 180
           DSRNNA GI SKSR SSSS+RGYSADRQR++RIAERLEAL ELLP S  ++ASALDD ID
Sbjct: 165 DSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAID 224

Query: 181 HIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGYG 240
           HIKYLQLQIK                           D SQSKLGGE SSEPFIFVEGYG
Sbjct: 225 HIKYLQLQIK---------------------------DLSQSKLGGELSSEPFIFVEGYG 284

Query: 241 HYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           HYM+HQEMQSEPLEEMVGKL+EVDPLAAAQLLEN+GLFVMPMDF EGLC
Sbjct: 285 HYMNHQEMQSEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFGEGLC 306

[Close]

BLAST of Lsi05G009230.1 vs. ExPASy TrEMBL
Match: A0A1S3BMP9 (transcription factor bHLH69-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491334 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.6e-110
Identity = 224/290 (77.24%), Postives = 241/290 (83.10%), Query Frame = 0


Query: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTA 60
           MEGQNGCNNSVRMLSLNFGANVNIVSQ   D TN+HHVLPADR+VNQT+ PHLTEWTQ A
Sbjct: 10  MEGQNGCNNSVRMLSLNFGANVNIVSQARRDFTNHHHVLPADRNVNQTNIPHLTEWTQAA 69

Query: 61  KTSPAFVEFIAETSKFPRKASTKDVIAVVPSTVQTINGVSEIRGEISYNHLAGSYSSKPT 120
           KTSPAFVEFIA+TS F R+ STKDVIAVVPSTVQTINGVSE+R +ISYNHLAGSY+SKPT
Sbjct: 70  KTSPAFVEFIADTSNFSRETSTKDVIAVVPSTVQTINGVSELRSKISYNHLAGSYNSKPT 129

Query: 121 DSRNNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQS--SKASALDDVID 180
           DSRNNA G  SKSR SSSS+RGYSADRQR++RIAERLEAL ELLP S  ++ASALDD ID
Sbjct: 130 DSRNNARGTLSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAID 189

Query: 181 HIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGYG 240
           HIKYLQL+IK                           D SQSKLGGE SSEPFIFVEGYG
Sbjct: 190 HIKYLQLRIK---------------------------DLSQSKLGGELSSEPFIFVEGYG 249

Query: 241 HYMSHQEMQ-SEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           HYM+HQEMQ SEPLEEMVGKL+EVDPLAAAQLLEN+GLFVMPMDFVEGLC
Sbjct: 250 HYMNHQEMQISEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFVEGLC 272

[Close]

BLAST of Lsi05G009230.1 vs. ExPASy TrEMBL
Match: A0A1S3BM32 (transcription factor bHLH69-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103491334 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.6e-110
Identity = 224/290 (77.24%), Postives = 241/290 (83.10%), Query Frame = 0


Query: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTA 60
           MEGQNGCNNSVRMLSLNFGANVNIVSQ   D TN+HHVLPADR+VNQT+ PHLTEWTQ A
Sbjct: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQARRDFTNHHHVLPADRNVNQTNIPHLTEWTQAA 60

Query: 61  KTSPAFVEFIAETSKFPRKASTKDVIAVVPSTVQTINGVSEIRGEISYNHLAGSYSSKPT 120
           KTSPAFVEFIA+TS F R+ STKDVIAVVPSTVQTINGVSE+R +ISYNHLAGSY+SKPT
Sbjct: 61  KTSPAFVEFIADTSNFSRETSTKDVIAVVPSTVQTINGVSELRSKISYNHLAGSYNSKPT 120

Query: 121 DSRNNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQS--SKASALDDVID 180
           DSRNNA G  SKSR SSSS+RGYSADRQR++RIAERLEAL ELLP S  ++ASALDD ID
Sbjct: 121 DSRNNARGTLSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAID 180

Query: 181 HIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGYG 240
           HIKYLQL+IK                           D SQSKLGGE SSEPFIFVEGYG
Sbjct: 181 HIKYLQLRIK---------------------------DLSQSKLGGELSSEPFIFVEGYG 240

Query: 241 HYMSHQEMQ-SEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           HYM+HQEMQ SEPLEEMVGKL+EVDPLAAAQLLEN+GLFVMPMDFVEGLC
Sbjct: 241 HYMNHQEMQISEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFVEGLC 263

[Close]

BLAST of Lsi05G009230.1 vs. ExPASy TrEMBL
Match: A0A1S3BN01 (transcription factor bHLH69-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491334 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.6e-110
Identity = 224/290 (77.24%), Postives = 241/290 (83.10%), Query Frame = 0


Query: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTA 60
           MEGQNGCNNSVRMLSLNFGANVNIVSQ   D TN+HHVLPADR+VNQT+ PHLTEWTQ A
Sbjct: 9   MEGQNGCNNSVRMLSLNFGANVNIVSQARRDFTNHHHVLPADRNVNQTNIPHLTEWTQAA 68

Query: 61  KTSPAFVEFIAETSKFPRKASTKDVIAVVPSTVQTINGVSEIRGEISYNHLAGSYSSKPT 120
           KTSPAFVEFIA+TS F R+ STKDVIAVVPSTVQTINGVSE+R +ISYNHLAGSY+SKPT
Sbjct: 69  KTSPAFVEFIADTSNFSRETSTKDVIAVVPSTVQTINGVSELRSKISYNHLAGSYNSKPT 128

Query: 121 DSRNNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQS--SKASALDDVID 180
           DSRNNA G  SKSR SSSS+RGYSADRQR++RIAERLEAL ELLP S  ++ASALDD ID
Sbjct: 129 DSRNNARGTLSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAID 188

Query: 181 HIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGYG 240
           HIKYLQL+IK                           D SQSKLGGE SSEPFIFVEGYG
Sbjct: 189 HIKYLQLRIK---------------------------DLSQSKLGGELSSEPFIFVEGYG 248

Query: 241 HYMSHQEMQ-SEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           HYM+HQEMQ SEPLEEMVGKL+EVDPLAAAQLLEN+GLFVMPMDFVEGLC
Sbjct: 249 HYMNHQEMQISEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFVEGLC 271

[Close]

BLAST of Lsi05G009230.1 vs. ExPASy TrEMBL
Match: A0A1S3BLG0 (transcription factor bHLH69-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491334 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.6e-110
Identity = 224/290 (77.24%), Postives = 241/290 (83.10%), Query Frame = 0


Query: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTA 60
           MEGQNGCNNSVRMLSLNFGANVNIVSQ   D TN+HHVLPADR+VNQT+ PHLTEWTQ A
Sbjct: 7   MEGQNGCNNSVRMLSLNFGANVNIVSQARRDFTNHHHVLPADRNVNQTNIPHLTEWTQAA 66

Query: 61  KTSPAFVEFIAETSKFPRKASTKDVIAVVPSTVQTINGVSEIRGEISYNHLAGSYSSKPT 120
           KTSPAFVEFIA+TS F R+ STKDVIAVVPSTVQTINGVSE+R +ISYNHLAGSY+SKPT
Sbjct: 67  KTSPAFVEFIADTSNFSRETSTKDVIAVVPSTVQTINGVSELRSKISYNHLAGSYNSKPT 126

Query: 121 DSRNNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQS--SKASALDDVID 180
           DSRNNA G  SKSR SSSS+RGYSADRQR++RIAERLEAL ELLP S  ++ASALDD ID
Sbjct: 127 DSRNNARGTLSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAID 186

Query: 181 HIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGYG 240
           HIKYLQL+IK                           D SQSKLGGE SSEPFIFVEGYG
Sbjct: 187 HIKYLQLRIK---------------------------DLSQSKLGGELSSEPFIFVEGYG 246

Query: 241 HYMSHQEMQ-SEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           HYM+HQEMQ SEPLEEMVGKL+EVDPLAAAQLLEN+GLFVMPMDFVEGLC
Sbjct: 247 HYMNHQEMQISEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFVEGLC 269

[Close]

BLAST of Lsi05G009230.1 vs. NCBI nr
Match: XP_038887382.1 (transcription factor LRL2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-121
Identity = 242/290 (83.45%), Postives = 251/290 (86.55%), Query Frame = 0


Query: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTA 60
           MEGQNGCNNSVRMLSLNFGANVNIVSQ PGD TN+HHVL ADR+VNQT+FPHLTEWTQTA
Sbjct: 26  MEGQNGCNNSVRMLSLNFGANVNIVSQAPGDFTNHHHVLSADRNVNQTNFPHLTEWTQTA 85

Query: 61  KTSPAFVEFIAETSKFPRKASTKDVIAVVPSTVQTINGVSEIRGEISYNHLAGSYSSKPT 120
           KTSPAFVEFIAETS FPRKASTKD+IAVVP+TVQTINGVSE+RGEISYNHLAGSYSSK T
Sbjct: 86  KTSPAFVEFIAETSNFPRKASTKDLIAVVPNTVQTINGVSELRGEISYNHLAGSYSSKST 145

Query: 121 DSRNNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQSSK---ASALDDVI 180
           DSRNNAPGI SKSR SSSSRRGYSADRQRRIRIAERLEALQELLP+SSK   ASALDDVI
Sbjct: 146 DSRNNAPGIVSKSRPSSSSRRGYSADRQRRIRIAERLEALQELLPESSKENQASALDDVI 205

Query: 181 DHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGY 240
           DHIKYLQLQIK                           D SQSKLGGESSSEPFIFVEGY
Sbjct: 206 DHIKYLQLQIK---------------------------DLSQSKLGGESSSEPFIFVEGY 265

Query: 241 GHYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           GHYMSHQEMQ EPLEEM+GKLLEVDPLAAAQLLEN+GLFVMPMDFVEGLC
Sbjct: 266 GHYMSHQEMQIEPLEEMMGKLLEVDPLAAAQLLENKGLFVMPMDFVEGLC 288

[Close]

BLAST of Lsi05G009230.1 vs. NCBI nr
Match: XP_038887384.1 (transcription factor LRL2-like isoform X2 [Benincasa hispida] >XP_038887385.1 transcription factor LRL2-like isoform X2 [Benincasa hispida] >XP_038887386.1 transcription factor LRL2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-121
Identity = 242/290 (83.45%), Postives = 251/290 (86.55%), Query Frame = 0


Query: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTA 60
           MEGQNGCNNSVRMLSLNFGANVNIVSQ PGD TN+HHVL ADR+VNQT+FPHLTEWTQTA
Sbjct: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQAPGDFTNHHHVLSADRNVNQTNFPHLTEWTQTA 60

Query: 61  KTSPAFVEFIAETSKFPRKASTKDVIAVVPSTVQTINGVSEIRGEISYNHLAGSYSSKPT 120
           KTSPAFVEFIAETS FPRKASTKD+IAVVP+TVQTINGVSE+RGEISYNHLAGSYSSK T
Sbjct: 61  KTSPAFVEFIAETSNFPRKASTKDLIAVVPNTVQTINGVSELRGEISYNHLAGSYSSKST 120

Query: 121 DSRNNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQSSK---ASALDDVI 180
           DSRNNAPGI SKSR SSSSRRGYSADRQRRIRIAERLEALQELLP+SSK   ASALDDVI
Sbjct: 121 DSRNNAPGIVSKSRPSSSSRRGYSADRQRRIRIAERLEALQELLPESSKENQASALDDVI 180

Query: 181 DHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGY 240
           DHIKYLQLQIK                           D SQSKLGGESSSEPFIFVEGY
Sbjct: 181 DHIKYLQLQIK---------------------------DLSQSKLGGESSSEPFIFVEGY 240

Query: 241 GHYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           GHYMSHQEMQ EPLEEM+GKLLEVDPLAAAQLLEN+GLFVMPMDFVEGLC
Sbjct: 241 GHYMSHQEMQIEPLEEMMGKLLEVDPLAAAQLLENKGLFVMPMDFVEGLC 263

[Close]

BLAST of Lsi05G009230.1 vs. NCBI nr
Match: XP_031742486.1 (transcription factor bHLH69 [Cucumis sativus] >KAE8647323.1 hypothetical protein Csa_004419 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 1.5e-112
Identity = 227/289 (78.55%), Postives = 242/289 (83.74%), Query Frame = 0


Query: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTA 60
           MEGQNGCNNSVRMLSL+FGANVNIVSQ P D TN+HHVLPADR+VNQT+ PHLTEWTQ A
Sbjct: 1   MEGQNGCNNSVRMLSLDFGANVNIVSQVPRDFTNHHHVLPADRNVNQTNIPHLTEWTQAA 60

Query: 61  KTSPAFVEFIAETSKFPRKASTKDVIAVVPSTVQTINGVSEIRGEISYNHLAGSYSSKPT 120
           KTSPAFVEFIAETS F RK STKDVIAVVPSTVQTINGVSE+RG+ISYNHLAGSY+SK T
Sbjct: 61  KTSPAFVEFIAETSSFSRKTSTKDVIAVVPSTVQTINGVSELRGKISYNHLAGSYNSKST 120

Query: 121 DSRNNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQS--SKASALDDVID 180
           DSRNNA GI SKSR SSSS+RGYSADRQR++RIAERLEAL ELLP S  ++ASALDD ID
Sbjct: 121 DSRNNARGILSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAID 180

Query: 181 HIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGYG 240
           HIKYLQLQIK                           D SQSKLGGE SSEPFIFVEGYG
Sbjct: 181 HIKYLQLQIK---------------------------DLSQSKLGGELSSEPFIFVEGYG 240

Query: 241 HYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           HYM+HQEMQSEPLEEMVGKL+EVDPLAAAQLLEN+GLFVMPMDF EGLC
Sbjct: 241 HYMNHQEMQSEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFGEGLC 262

[Close]

BLAST of Lsi05G009230.1 vs. NCBI nr
Match: KAG7036370.1 (Transcription factor bHLH69 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.5 bits (1051), Expect = 2.5e-110
Identity = 226/292 (77.40%), Postives = 243/292 (83.22%), Query Frame = 0


Query: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTA 60
           MEGQNGCN SV+MLSLNFGANVNIVSQ PGD  N+HHV  ADR++NQT+FPH+ EWTQTA
Sbjct: 1   MEGQNGCNGSVQMLSLNFGANVNIVSQVPGDCANHHHVSAADRNLNQTNFPHIIEWTQTA 60

Query: 61  KTSPAFVEFIAETSKFPRKASTKDVIAVVP-STVQTINGVSEIRGEISYNHLAGSYSSKP 120
           KTSP FVEFIAETS FPRK STKD+IAVVP S++QTI+GVSEI GEISYNH AGSY+SKP
Sbjct: 61  KTSPTFVEFIAETSNFPRKESTKDMIAVVPVSSIQTIDGVSEIHGEISYNHPAGSYTSKP 120

Query: 121 TDSR-NNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQSSK---ASALDD 180
           TDSR +N  G  SK R+SSSSRRGYS DRQRRIRIAERLEALQ LLP +SK   ASALDD
Sbjct: 121 TDSRKDNMSGSLSKPRTSSSSRRGYSTDRQRRIRIAERLEALQALLPLASKGNQASALDD 180

Query: 181 VIDHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVE 240
           VIDHIKYLQLQIKVG   L      LY             D SQSK+GGESSSEPF+FVE
Sbjct: 181 VIDHIKYLQLQIKVGIFALALFCTFLY------------RDLSQSKIGGESSSEPFLFVE 240

Query: 241 GYGHYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           GYGHYMSHQEMQ EPLEEMVGKLLEVDPLAAAQLLEN+GLFVMPMDFVEGLC
Sbjct: 241 GYGHYMSHQEMQGEPLEEMVGKLLEVDPLAAAQLLENKGLFVMPMDFVEGLC 280

[Close]

BLAST of Lsi05G009230.1 vs. NCBI nr
Match: XP_008449454.1 (PREDICTED: transcription factor bHLH69-like isoform X3 [Cucumis melo])

HSP 1 Score: 409.1 bits (1050), Expect = 3.2e-110
Identity = 224/290 (77.24%), Postives = 241/290 (83.10%), Query Frame = 0


Query: 1   MEGQNGCNNSVRMLSLNFGANVNIVSQGPGDSTNYHHVLPADRSVNQTDFPHLTEWTQTA 60
           MEGQNGCNNSVRMLSLNFGANVNIVSQ   D TN+HHVLPADR+VNQT+ PHLTEWTQ A
Sbjct: 7   MEGQNGCNNSVRMLSLNFGANVNIVSQARRDFTNHHHVLPADRNVNQTNIPHLTEWTQAA 66

Query: 61  KTSPAFVEFIAETSKFPRKASTKDVIAVVPSTVQTINGVSEIRGEISYNHLAGSYSSKPT 120
           KTSPAFVEFIA+TS F R+ STKDVIAVVPSTVQTINGVSE+R +ISYNHLAGSY+SKPT
Sbjct: 67  KTSPAFVEFIADTSNFSRETSTKDVIAVVPSTVQTINGVSELRSKISYNHLAGSYNSKPT 126

Query: 121 DSRNNAPGIQSKSRSSSSSRRGYSADRQRRIRIAERLEALQELLPQS--SKASALDDVID 180
           DSRNNA G  SKSR SSSS+RGYSADRQR++RIAERLEAL ELLP S  ++ASALDD ID
Sbjct: 127 DSRNNARGTLSKSRPSSSSKRGYSADRQRKMRIAERLEALLELLPPSKENQASALDDAID 186

Query: 181 HIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGYG 240
           HIKYLQL+IK                           D SQSKLGGE SSEPFIFVEGYG
Sbjct: 187 HIKYLQLRIK---------------------------DLSQSKLGGELSSEPFIFVEGYG 246

Query: 241 HYMSHQEMQ-SEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           HYM+HQEMQ SEPLEEMVGKL+EVDPLAAAQLLEN+GLFVMPMDFVEGLC
Sbjct: 247 HYMNHQEMQISEPLEEMVGKLMEVDPLAAAQLLENKGLFVMPMDFVEGLC 269

[Close]

BLAST of Lsi05G009230.1 vs. TAIR 10
Match: AT5G64980.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-18
Identity = 55/156 (35.26%), Postives = 88/156 (56.41%), Query Frame = 0


Query: 136 SSSSRRGYSADRQRRIRIAERLEALQELLPQSSKAS----ALDDVIDHIKYLQLQIKVGS 195
           S+ S + Y+ +R+R+ RIA+ ++AL +LLP   +       L+ ++DH+K L LQ+K   
Sbjct: 216 STRSNKCYTNERERKQRIADNIKALGKLLPHKVEGDNHELTLNAMVDHVKLLHLQMK--- 275

Query: 196 LPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVEGYGHYMSHQEMQSEPL 255
                                   + S+S+LGGE  S P  F+EGYGHY+ H++  ++ L
Sbjct: 276 ------------------------ELSRSRLGGEPISHPMAFIEGYGHYIHHEQTMAKSL 335

Query: 256 EEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGLC 288
           EE++  LL  D  AAA LLE++GL++ P+  V+G C
Sbjct: 336 EEVMEDLLTKDFDAAANLLESKGLYLTPLSSVQGSC 344

[Close]

BLAST of Lsi05G009230.1 vs. TAIR 10
Match: AT4G30980.1 (LJRHL1-like 2 )

HSP 1 Score: 65.9 bits (159), Expect = 6.2e-11
Identity = 79/279 (28.32%), Postives = 126/279 (45.16%), Query Frame = 0


Query: 29  PGDSTNYHHVLPADRSVNQTDFPH----LTEWTQTA--KTSPAFVEFIAETSKFPRKAST 88
           P  S + H   PA  + +  DF H     T W  +    T P   +    T      A +
Sbjct: 9   PSSSPSPHLQSPA--TFDHDDFLHHIFSSTPWPSSVLDDTPPPTSDCAPVTGFHHHDADS 68

Query: 89  KDVIAVVPSTVQ-----TINGVSEIRGEISYNHLAGSYSSKPTDSRNNAPG------IQS 148
           ++ I ++P +         NG S   G + ++   GS     T S+  A         Q 
Sbjct: 69  RNQITMIPLSHNHPNDALFNGFS--TGSLPFHLPQGSGGQTQTQSQATASATTGGATAQP 128

Query: 149 KSRSSSSSRRGYS------ADRQRRIRIAERLEALQELLP---QSSKASALDDVIDHIKY 208
           +++    +RRG +      A+R RR RIAER+++LQEL+P   ++ KAS LD++ID++K+
Sbjct: 129 QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKF 188

Query: 209 LQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVE-GYGHYM 268
           LQLQ+KV                            S S+LGG +S+   I  + G  H  
Sbjct: 189 LQLQVKV---------------------------LSMSRLGGAASASSQISEDAGGSHEN 248

Query: 269 SHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPM 281
           +    +++  E  V KL+E D  +A Q L+ +GL +MP+
Sbjct: 249 TSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPI 256

[Close]

BLAST of Lsi05G009230.1 vs. TAIR 10
Match: AT2G24260.1 (LJRHL1-like 1 )

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-10
Identity = 61/183 (33.33%), Postives = 92/183 (50.27%), Query Frame = 0


Query: 117 SKPTDSRNNAPG----IQSKSRSSSSSRRGYS------ADRQRRIRIAERLEALQELLP- 176
           ++P  S + A G       +SR+   +RRG +      A+R RR RIAER++ALQEL+P 
Sbjct: 114 TQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPN 173

Query: 177 --QSSKASALDDVIDHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLG 236
             ++ KAS LD++ID++K+LQLQ+KV       L +S  G    V + I       S+ G
Sbjct: 174 GNKTDKASMLDEIIDYVKFLQLQVKV-------LSMSRLGGAASVSSQI-------SEAG 233

Query: 237 GESSSEPFIFVEGYGHYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFV 287
           G   +     V G      +        E  V KL+E D  +A Q L+ +GL +MP+   
Sbjct: 234 GSHGNASSAMVGG-SQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLA 281

[Close]

BLAST of Lsi05G009230.1 vs. TAIR 10
Match: AT5G58010.1 (LJRHL1-like 3 )

HSP 1 Score: 62.4 bits (150), Expect = 6.9e-10
Identity = 58/178 (32.58%), Postives = 95/178 (53.37%), Query Frame = 0


Query: 120 TDSRNNAPGIQSKSRSSSSSRRGYS------ADRQRRIRIAERLEALQELLP---QSSKA 179
           T S  +AP ++ K R    +RRG +      A+R RR RIAER+++LQEL+P   ++ KA
Sbjct: 84  TVSTTSAPVVRQKPR--VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKA 143

Query: 180 SALDDVIDHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGG--ESSS 239
           S LD++I+++++LQLQ+KV       L +S  G    V   ++ L    ++ GG   + +
Sbjct: 144 SMLDEIIEYVRFLQLQVKV-------LSMSRLGGAGSVGPRLNGL---SAEAGGRLNALT 203

Query: 240 EPFIFVEGYGHYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPMDFVEGL 287
            P   + G G+            E+ V KL+E D  +A Q L+ +GL +MP+     +
Sbjct: 204 APCNGLNGNGNATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 249

[Close]

BLAST of Lsi05G009230.1 vs. TAIR 10
Match: AT4G02590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-08
Identity = 53/165 (32.12%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 125 NAPGIQSKSRSSSSSRRGYS------ADRQRRIRIAERLEALQELLP---QSSKASALDD 184
           +AP   +  R    +RRG +      A+R RR RIAER+ ALQEL+P   ++ +A+ +D+
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDE 193

Query: 185 VIDHIKYLQLQIKVGSLPLIALHVSLYGTLQLVENLIHMLDFSQSKLGGESSSEPFIFVE 244
           ++D++K+L+LQ+KV       L +S  G    V  L+  +  S       SS E      
Sbjct: 194 IVDYVKFLRLQVKV-------LSMSRLGGAGAVAPLVTDMPLS-------SSVEDETGEG 253

Query: 245 GYGHYMSHQEMQSEPLEEMVGKLLEVDPLAAAQLLENQGLFVMPM 281
           G     + ++  ++  E  V KL+E +  AA QLL+++ L +MP+
Sbjct: 254 GRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPI 284

The following BLAST results are available for this feature:

BLAST of Lsi05G009230.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3D5	8.8e-10	28.32	Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2	[more]
Q9ZUG9	4.4e-09	33.33	Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1	[more]
Q9LSQ3	9.7e-09	32.58	Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1	[more]
D0PX88	1.3e-08	30.15	bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1	[more]
O22768	5.3e-07	32.12	Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2	[more]

BLAST of Lsi05G009230.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHM8	7.5e-113	78.55	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G409980 PE=4 S...	[more]
A0A1S3BMP9	1.6e-110	77.24	transcription factor bHLH69-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A1S3BM32	1.6e-110	77.24	transcription factor bHLH69-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A1S3BN01	1.6e-110	77.24	transcription factor bHLH69-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A1S3BLG0	1.6e-110	77.24	transcription factor bHLH69-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491...	[more]

BLAST of Lsi05G009230.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887382.1	1.1e-121	83.45	transcription factor LRL2-like isoform X1 [Benincasa hispida]	[more]
XP_038887384.1	1.1e-121	83.45	transcription factor LRL2-like isoform X2 [Benincasa hispida] >XP_038887385.1 tr...	[more]
XP_031742486.1	1.5e-112	78.55	transcription factor bHLH69 [Cucumis sativus] >KAE8647323.1 hypothetical protein...	[more]
KAG7036370.1	2.5e-110	77.40	Transcription factor bHLH69 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008449454.1	3.2e-110	77.24	PREDICTED: transcription factor bHLH69-like isoform X3 [Cucumis melo]	[more]

BLAST of Lsi05G009230.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64980.1	1.1e-18	35.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G30980.1	6.2e-11	28.32	LJRHL1-like 2	[more]
AT2G24260.1	3.1e-10	33.33	LJRHL1-like 1	[more]
AT5G58010.1	6.9e-10	32.58	LJRHL1-like 3	[more]
AT4G02590.1	3.8e-08	32.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 143..189 e-value: 2.6E-6 score: 37.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 145..184 e-value: 9.4E-7 score: 28.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 137..186 score: 9.578352
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 130..189 e-value: 3.7E-9 score: 38.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 138..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..142
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 132..283
None	No IPR available	PANTHER	PTHR16223:SF109	TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1	coord: 132..283
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 12..123
None	No IPR available	PANTHER	PTHR16223:SF109	TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1	coord: 12..123
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 145..191 e-value: 2.40858E-14 score: 64.1247

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi05G009230	Lsi05G009230	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G009230.1.exon.1	Lsi05G009230.1.exon.1	exon
Lsi05G009230.1.exon.2	Lsi05G009230.1.exon.2	exon
Lsi05G009230.1.exon.3	Lsi05G009230.1.exon.3	exon
Lsi05G009230.1.exon.4	Lsi05G009230.1.exon.4	exon
Lsi05G009230.1.exon.5	Lsi05G009230.1.exon.5	exon
Lsi05G009230.1.exon.6	Lsi05G009230.1.exon.6	exon
Lsi05G009230.1.exon.7	Lsi05G009230.1.exon.7	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G009230.1.five_prime_UTR.1	Lsi05G009230.1.five_prime_UTR.1	five_prime_UTR
Lsi05G009230.1.five_prime_UTR.2	Lsi05G009230.1.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G009230.1.CDS.1	Lsi05G009230.1.CDS.1	CDS
Lsi05G009230.1.CDS.2	Lsi05G009230.1.CDS.2	CDS
Lsi05G009230.1.CDS.3	Lsi05G009230.1.CDS.3	CDS
Lsi05G009230.1.CDS.4	Lsi05G009230.1.CDS.4	CDS
Lsi05G009230.1.CDS.5	Lsi05G009230.1.CDS.5	CDS
Lsi05G009230.1.CDS.6	Lsi05G009230.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G009230.1.three_prime_UTR.1	Lsi05G009230.1.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi05G009230.1	Lsi05G009230.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity