Lsi05G005660.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G005660.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ABC transporter domain-containing protein
Location	chr05: 7022396 .. 7026303 (+)
Sequence length	735
RNA-Seq Expression	Lsi05G005660.1
Synteny	Lsi05G005660.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATTGTAAGTTATTTATGGATTACGAACCAAATTGAATAAGTTGTTCTGGATGGCAATATTAATAAGATGCACTCCTTAAAATTATACGATGTCTTGAAGTTTAGGATTAGATTCTGTGACTATCCATTAAGTTACGATAGGCATAGCCTAATTCAAATGTAGAAAGGAATGAGATTTGATTTACTTGTTTATGTTGGTTTCATCAAGTGCTAATGTAATGAGTTTAGTTGTTTTTTATTTGACTTGTTTTGATAAATTTAGGTGTAAGCTAAATGGCTTTGGCGTTTTCCTTTTGATTCTACTACCCTTTGGCACAAGGTCATTGCTACCAAGTATGGGCTTCATCCCTTCGAGTGGTTGTCGAGTGGGGTTAAAGCACCTACTGGAATTTGTGGAAGGATATATCATATATCTAACGAGCTCCCCTCGTCCGTTGTGTGGTAGGAGAGGGCAAGGAAACATATTTCTGGGAAGATTAGTGGTTGGGAGATGGACACTTTTTGCTCTACATTTTTCCATCTTTGTCACTTATCATTCTTCAAAAACCATCTAGTTTCTGAATTTATGATTTGGTCGGGGAGCTCGGTTTCCTTTTCCTTTGGTTTTAGTTGCTCTTTGACCGATAGAGAAGCAATTGATGTCATCTCTTTGTTGTCATTGTTGGGGGAGTTTAACTTTAGGCGAGAGATAGGATTTGCATTTGGAATCCCGACAGTCTTGTGGGATTCTCCTGTCATTCTTTTTTCCGTTGTCTGTTGGATCCTTCTCCTTCTAGTGAGTTTGTTTTTGGAGATGCGAGTTCACGCATTCTGTTTGGAATTTGTTCTTCTAGAAGTTTGGCTTTGTGCTCGCTTGTCAAAGGGACATTAGTGTTACAATCATGCAATTCCTCCTCCATCTGCTTCTTTGTAAGAAAGGTTGTTTCTTGTTGGTGGGGGGGGGTGTGCTATCTTCTTCTTCTTCTTAACACGAACATAACATCAAAATTTAACTAACATATTAGAACTTGTGAAGAGAAATTTTTTAGTGGTTTGTTTTGATTTGACGAGTTAGTAACTTAGTATTCAATTTTACGATAAGTTTGTTTAGGTTATGTTGTTATGTTCACGTTTTGATTAGTTTAGATGTTTGTTTTAATTTTTCAAGTTTAGCATTCTCACGATAAGCTTGTTTAGTTTGGTTGTTTGTATTAATTTGATTTTTTCAGTATTTATGTTCATGATAATTGAGTTTAATAGTTTTGTTCATCAGTTTTGATTAATTTAAATTTTACATTCACAAGTTCGAAAAGTTAGTTAAATTTAGTTTTTACGCTTAGAACTTTTGATAAGTTAATTACGTTTGAATGTTATGCTCATCAGTTTTGAAAAGTTAGCTGAATTTAGGTGTTATGTTTGTAAGTCTTTATTTGTTAAGTTTCTGACGTTATGCTCACAAGTTTTAATAGGTTTAGTTGTTCGTCTTAATTTAATGAGTTAATTTTCATTTTTATGATGAGTTAGTTAACCTTTGATGTTATGTTCGTAAGTTTTGATAAGTTTAGTTGTTCATTTTAATTTGATAGGTTTAGGCCTTGTTTGATAAGCATTTTGTATTTGGTTTTCTGATATTGAAAATTAAGTTTCTAAATACTACTTCTATCTATAACTTTTCTAATAGAAAATATAGGGAATCAAACAGTGAATTAAATCGACAGGAATTCTAAAGCCAAACAATTAATAACCAAAATATTTAATAAGAAATTAAGGGTAGAGAAAGCTTGTGATTTTGGGTTGAGGCGCGTTGACGCGCTCCTTAGATAAGACATGCCCTCACTTGCACTGAGTAATTCGGCACTTCACTCCCAGGATCTAACACCCTTCAAGAACGCTTGTGTGCAGCTAAGCGATCTTTCGAACTTCTTTGAACTTGTAGCTCACAAAAACTTTTTGGAATCGCATATTGAAATCGCCAAAACTATATCTCCCTTATGGAAGGAAGAAGACGATTAAAAAGCCCTAACCCCCTCCACGTAGCGTTAAAGTATGCTTAAAACAGGGGAGGAAAATAGACTTTTTCTCACCCATTAACGTTCTAAAAATAAAATAAAATAAAATAATTAAGATAAAATAAAAATAAAATATGAAAATCAGTTAAATTATCCAACATTTTCCACTTTATTACCTGTTTTTTTGAAAATGTTTTAAAAAACCAAGCCAAAATTTGTAAACTAAAAAACATAGGTCCATTTAATAATGATTTCGTTTTTAGTTTTCTGCTTGGTTCTTCCCAATTCTTCTATTTTGGTTTTCACCTACCTTAAAGAAACACACTTGAATTCCTTATTAGATTCTAAAAACAAAAAATAAAAACTACTTTTATTTAGTTTTAAAACAAACTTGACTTGGTTTTTGAAAATATGAGTAGAAAGTGGATAACAAACATAGAAACTTATGGATGCAAGTAGTGTTTATAAGTTTAATTTTAAAAAACCAAAAATCGAATGGTTATCAAATGGGGTCATAGGTTTTGAAAACTTGATTTTGTTTTTTAAATTTGCTTTGGAATTCAAATGTGTTTTAAGTAAGATAAAAAGCCTACCGAAAAAATTAATTTCAATAAGAGAAAACCAAAAACAAAATGTTTATCAAATGGGATATATGTTTATAAGTATTGATAAGTTTGTTAAATTTTGTTGTTATGTTCATAAGTTTTGATAAGTTAGTTGTTTATTTCAATTCTTAATTCTTCTGCTTACACTATTTCCTTTCTTCTTCTATGTCAGATCCTATACATTGACGGAAATTGTACTGTTTTATGAAACTATAATGAACTAGGGAGATTTTATTTTCTTTTGGCTGCACTGACAAAATACTGTGCTTGAGAAACACGATCAATCATGGTAGGTAAATATATGATCAAGTTATACTTTGTGAAACTCTTGTTTCTTCATAACTTTGGCAAATTCCATTCAGATTCTAGACTTTTCTTTTTCTTGGCTTTACAAATACTGAGATTATGAAATCTTTTGCTGGTAGTTTGTACATAATTCTTATTTATTTCTTTACATACCTTTTGTAACACCCTTTTAATCTCTGTCCTACTACAGGAAGTATTGTTGTGTGTAGGTTCTTATGAAACTGAGCCTAAAAGAGCAAACTAAGGGAGATGGCTGTATTTAGTATGGAGAATTTCAGTGTTTTGCAGTGAATACTAGTTTTGAATCTCAACCAATGTCTCTTAGAAGACCGCCACTTCCTCGCCTTCTACTCAACCAGGTCTCCTGTATGCGGAACGCCCAACAAATCCTTAGAAATGTTAATGTCTCAATCCATGATGGCAGTGCACTTGTGCTGACCGGTACCAATGGTTCGGGCAAAACGACATTCCTACGAATGTTAGCTGGATTCTCCCGACCTTCTGCTGGTGAGATCCTATGGAATGGCCATGACATTACAGAATCAGGGGTGTTCCACCAATACAAGCTTCAGCTGAATTGGCTCTCACTCAAAGATGCCATTAAAGAGAACTTTACTGTCATTGACAACGTTCAGTGGTTTGAGGTGCTTGAGGGGAAGCATGGCAGGTCAATGCCTGCCATCGAGCTGATGGGGCTCGGAAAATTGGCAAAAGAGAAGGCGAGAATGCTGTCGATGGGGCAACGAAAACGCCTGCAACTTGCAAGATTGTTGGCGATCGATAGACCGATTTGGCTTCTTGATGAGCCTTCAGTTGCATTAGATGATGATGGGGTGAAGTTGCTGGAATACATCATTGCTGAACATAGAAAGAAAGGTGGGATTGTTATTGTAGCAACACATATACCAATAGAAATTGAAGATGCCATGATCTTGAGGCTTCCGCCACGGTTCCCACGGAGAATGACCTTGGTCGATATGCTCGACCGGAGTGACATATCGTAG

mRNA sequence

ATGAAAATTTGTTTTGCAGTGAATACTAGTTTTGAATCTCAACCAATGTCTCTTAGAAGACCGCCACTTCCTCGCCTTCTACTCAACCAGGTCTCCTGTATGCGGAACGCCCAACAAATCCTTAGAAATGTTAATGTCTCAATCCATGATGGCAGTGCACTTGTGCTGACCGGTACCAATGGTTCGGGCAAAACGACATTCCTACGAATGTTAGCTGGATTCTCCCGACCTTCTGCTGGTGAGATCCTATGGAATGGCCATGACATTACAGAATCAGGGGTGTTCCACCAATACAAGCTTCAGCTGAATTGGCTCTCACTCAAAGATGCCATTAAAGAGAACTTTACTGTCATTGACAACGTTCAGTGGTTTGAGGTGCTTGAGGGGAAGCATGGCAGGTCAATGCCTGCCATCGAGCTGATGGGGCTCGGAAAATTGGCAAAAGAGAAGGCGAGAATGCTGTCGATGGGGCAACGAAAACGCCTGCAACTTGCAAGATTGTTGGCGATCGATAGACCGATTTGGCTTCTTGATGAGCCTTCAGTTGCATTAGATGATGATGGGGTGAAGTTGCTGGAATACATCATTGCTGAACATAGAAAGAAAGGTGGGATTGTTATTGTAGCAACACATATACCAATAGAAATTGAAGATGCCATGATCTTGAGGCTTCCGCCACGGTTCCCACGGAGAATGACCTTGGTCGATATGCTCGACCGGAGTGACATATCGTAG

Coding sequence (CDS)

ATGAAAATTTGTTTTGCAGTGAATACTAGTTTTGAATCTCAACCAATGTCTCTTAGAAGACCGCCACTTCCTCGCCTTCTACTCAACCAGGTCTCCTGTATGCGGAACGCCCAACAAATCCTTAGAAATGTTAATGTCTCAATCCATGATGGCAGTGCACTTGTGCTGACCGGTACCAATGGTTCGGGCAAAACGACATTCCTACGAATGTTAGCTGGATTCTCCCGACCTTCTGCTGGTGAGATCCTATGGAATGGCCATGACATTACAGAATCAGGGGTGTTCCACCAATACAAGCTTCAGCTGAATTGGCTCTCACTCAAAGATGCCATTAAAGAGAACTTTACTGTCATTGACAACGTTCAGTGGTTTGAGGTGCTTGAGGGGAAGCATGGCAGGTCAATGCCTGCCATCGAGCTGATGGGGCTCGGAAAATTGGCAAAAGAGAAGGCGAGAATGCTGTCGATGGGGCAACGAAAACGCCTGCAACTTGCAAGATTGTTGGCGATCGATAGACCGATTTGGCTTCTTGATGAGCCTTCAGTTGCATTAGATGATGATGGGGTGAAGTTGCTGGAATACATCATTGCTGAACATAGAAAGAAAGGTGGGATTGTTATTGTAGCAACACATATACCAATAGAAATTGAAGATGCCATGATCTTGAGGCTTCCGCCACGGTTCCCACGGAGAATGACCTTGGTCGATATGCTCGACCGGAGTGACATATCGTAG

Protein sequence

MKICFAVNTSFESQPMSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSMPAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS

Homology

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BLAST of Lsi05G005660.1 vs. ExPASy Swiss-Prot
Match: Q9C8T1 (ABC transporter I family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCI1 PE=2 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.0e-112
Identity = 196/229 (85.59%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MS+RRP +PRLLL  VSCMRNAQQILR+VNVS+HDG ALVLTGTNGSGK+TFLRMLAGFS
Sbjct: 1   MSIRRPQIPRLLLQNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           +PSAGEILWNGHDIT+SG+F QYKLQLNW+SLKDAIKE FTV+DNVQWFE+LE K G++ 
Sbjct: 61  KPSAGEILWNGHDITQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQ 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           PA+ELMGLG+L KEK+RMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDD+GV+LLEYI
Sbjct: 121 PALELMGLGRLVKEKSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           IAEHRKKGGIVIVATH+PI+IEDAMILRLPPRFPR+MTL+DMLDR+DIS
Sbjct: 181 IAEHRKKGGIVIVATHLPIDIEDAMILRLPPRFPRKMTLIDMLDRADIS 229

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BLAST of Lsi05G005660.1 vs. ExPASy Swiss-Prot
Match: Q2VZJ1 (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=ccmA PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.7e-34
Identity = 79/199 (39.70%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 31  VSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSAGEILWNGHDIT 90
           ++C+R  + +   +  S+  G ALVL G NGSGK++ LR+LAG  +P+ G + WNG  + 
Sbjct: 11  LACVRGGRVVFAGLGFSLSAGGALVLLGPNGSGKSSLLRVLAGLLKPAHGLLAWNGEALA 70

Query: 91  ESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKH----GRSM-PAIELMGLGK 150
           E    H    + ++L   DA+K   +V +N++++  L   H    GR++  A+   GL +
Sbjct: 71  EDPEAH--AARTHYLGHHDAVKPVLSVAENLRFWAHLHDPHAERAGRAVDAALSRFGLAR 130

Query: 151 LAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKKGGI 210
           LA    +MLS GQ++R  LARLLA   P+WLLDEP+ ALD   +K+LE ++AEHR  GG+
Sbjct: 131 LATIPGKMLSAGQKRRTNLARLLAAPSPLWLLDEPTTALDKASIKVLEDVLAEHRAAGGM 190

Query: 211 VIVATHIPIEIEDAMILRL 225
           V+++TH  I +  A  L L
Sbjct: 191 VVLSTHADINMPGAQELHL 207

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BLAST of Lsi05G005660.1 vs. ExPASy Swiss-Prot
Match: Q2Y9Q1 (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) OX=323848 GN=ccmA PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-30
Identity = 76/205 (37.07%), Postives = 116/205 (56.59%), Query Frame = 0


Query: 23  LPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSAGEI 82
           +P L    ++C+R  +++   VN  +  G  + + G NGSGKT+ LRML G + P+ GEI
Sbjct: 1   MPTLEGIDLTCIRGDRKLFSGVNFLLESGGLMQVQGPNGSGKTSLLRMLCGLASPAEGEI 60

Query: 83  LWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEG---KHGRSMPAIE 142
            W+G  I   G    Y   + +L     +K++ T I+N++    L G      ++  A++
Sbjct: 61  RWDGTQIRSLG--GDYFGAMTYLGHLGGVKDDLTAIENLRISSALGGVDLDERKAHDALQ 120

Query: 143 LMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYIIAEH 202
            MGLG      A++LS GQR+R+ LARLL     +W+LDEP  ALD   VKL++ +I  H
Sbjct: 121 HMGLGGRELLPAKVLSQGQRRRVTLARLLVCGTVLWILDEPLTALDTSAVKLVQGLIERH 180

Query: 203 RKKGGIVIVATHIPIEIEDAMILRL 225
            + GG++++ TH  IEI  A I RL
Sbjct: 181 LEHGGMIVMTTHQEIEIAGAAIQRL 203

[Close]

BLAST of Lsi05G005660.1 vs. ExPASy Swiss-Prot
Match: Q8XE58 (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Escherichia coli O157:H7 OX=83334 GN=ccmA PE=3 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-29
Identity = 68/199 (34.17%), Postives = 115/199 (57.79%), Query Frame = 0


Query: 26  LLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSAGEILWN 85
           L + ++ C R+ + +   ++ +++ G  + +TG+NG+GKTT LR+L G SRP AGE+LW 
Sbjct: 4   LEVRELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQ 63

Query: 86  GHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSMPAIELMGLGK 145
           G  + +  V   Y   L W+  +  IK   T ++N+ ++   +G   + + A+   GL  
Sbjct: 64  GQPLHQ--VRDSYHQNLLWIGHQPGIKTRLTALENLHFYH-RDGDTAQCLEALAQAGLAG 123

Query: 146 LAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKKGGI 205
                   LS GQ++R+ LARL      +W+LDEP  A+D +GV  L   +A+H ++GGI
Sbjct: 124 FEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGI 183

Query: 206 VIVATHIPIEIEDAMILRL 225
           VI+ TH P+ + ++ I R+
Sbjct: 184 VILTTHQPLNVAESKIRRI 199

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BLAST of Lsi05G005660.1 vs. ExPASy Swiss-Prot
Match: Q0TFP1 (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) OX=362663 GN=ccmA PE=3 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-29
Identity = 67/195 (34.36%), Postives = 113/195 (57.95%), Query Frame = 0


Query: 30  QVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSAGEILWNGHDI 89
           ++ C R+ + +   ++ +++ G  + +TG+NG+GKTT LR+L G SRP AGE+LW G  +
Sbjct: 8   ELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQGQPL 67

Query: 90  TESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSMPAIELMGLGKLAKE 149
            +  V   Y   L W+  +  IK   T ++N+ ++   +G   + + A+   GL      
Sbjct: 68  HQ--VRDSYHQNLLWIGHQPGIKTRLTALENLHFYH-RDGDTAQCLEALAQAGLAGFEDI 127

Query: 150 KARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKKGGIVIVA 209
               LS GQ++R+ LARL      +W+LDEP  A+D +GV  L   +A+H ++GGIVI+ 
Sbjct: 128 PVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGIVILT 187

Query: 210 THIPIEIEDAMILRL 225
           TH P+ + ++ I R+
Sbjct: 188 THQPLNVAESKIRRI 199

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BLAST of Lsi05G005660.1 vs. ExPASy TrEMBL
Match: A0A6J1CMH6 (ABC transporter I family member 1 OS=Momordica charantia OX=3673 GN=LOC111012986 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.4e-120
Identity = 223/229 (97.38%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MSLRRP LPRLLLNQVSCMRNAQQILRNVNVSIHDG ALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRRPQLPRLLLNQVSCMRNAQQILRNVNVSIHDGGALVLTGTNGSGKTTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTV+DNVQWFEVLEGK G SM
Sbjct: 61  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVLDNVQWFEVLEGKQGGSM 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           +AEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS
Sbjct: 181 VAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 229

[Close]

BLAST of Lsi05G005660.1 vs. ExPASy TrEMBL
Match: A0A6J1L2F3 (ABC transporter I family member 1 OS=Cucurbita maxima OX=3661 GN=LOC111498491 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.8e-120
Identity = 219/229 (95.63%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MSLR+PPLPRLLLNQVSCMRNAQQILRNV+VSIHDGSALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVSVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHG+S+
Sbjct: 61  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGKSL 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           P+++LMGLGKLAKEKARMLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           IAEHRKKGGIVIVATHIPI+IEDAMILRLPPRFPRRMTLVDMLDR+DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229

[Close]

BLAST of Lsi05G005660.1 vs. ExPASy TrEMBL
Match: A0A6J1F833 (ABC transporter I family member 1 OS=Cucurbita moschata OX=3662 GN=LOC111443177 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.2e-119
Identity = 218/229 (95.20%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MSLR+PPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           RPS GEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGK G+S+
Sbjct: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           P+++LMGLGKLAKEKARMLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           IAEHRKKGGIVIVATHIPI+IEDAMILRLPPRFPRRMTLVDMLDR+DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229

[Close]

BLAST of Lsi05G005660.1 vs. ExPASy TrEMBL
Match: A0A5A7UNI2 (ABC transporter I family member 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00400 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.9e-119
Identity = 218/229 (95.20%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MSLR PPLPRLLL+QVSCMRNAQQILRNVNVSIHDGSALVL+GTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRGPPLPRLLLDQVSCMRNAQQILRNVNVSIHDGSALVLSGTNGSGKTTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           RPSAG ILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFT+IDNVQWFEVLEGKHGRSM
Sbjct: 61  RPSAGRILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTIIDNVQWFEVLEGKHGRSM 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           PAIELMGLG+LAKEKA+MLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGRLAKEKAKMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           IAEHRKKGGIVIVATHIPI+IEDAMILRLPPRFPRR+TL DMLDR DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIDIEDAMILRLPPRFPRRITLADMLDRCDIS 229

[Close]

BLAST of Lsi05G005660.1 vs. ExPASy TrEMBL
Match: A0A1S3BLD4 (ABC transporter I family member 1 OS=Cucumis melo OX=3656 GN=LOC103491084 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.9e-119
Identity = 218/229 (95.20%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MSLR PPLPRLLL+QVSCMRNAQQILRNVNVSIHDGSALVL+GTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRGPPLPRLLLDQVSCMRNAQQILRNVNVSIHDGSALVLSGTNGSGKTTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           RPSAG ILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFT+IDNVQWFEVLEGKHGRSM
Sbjct: 61  RPSAGRILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTIIDNVQWFEVLEGKHGRSM 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           PAIELMGLG+LAKEKA+MLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGRLAKEKAKMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           IAEHRKKGGIVIVATHIPI+IEDAMILRLPPRFPRR+TL DMLDR DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIDIEDAMILRLPPRFPRRITLADMLDRCDIS 229

[Close]

BLAST of Lsi05G005660.1 vs. NCBI nr
Match: XP_038903637.1 (ABC transporter I family member 1 [Benincasa hispida] >XP_038903638.1 ABC transporter I family member 1 [Benincasa hispida])

HSP 1 Score: 453.8 bits (1166), Expect = 9.7e-124
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM
Sbjct: 61  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 229

[Close]

BLAST of Lsi05G005660.1 vs. NCBI nr
Match: XP_022142995.1 (ABC transporter I family member 1 [Momordica charantia] >XP_022142996.1 ABC transporter I family member 1 [Momordica charantia])

HSP 1 Score: 442.2 bits (1136), Expect = 2.9e-120
Identity = 223/229 (97.38%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MSLRRP LPRLLLNQVSCMRNAQQILRNVNVSIHDG ALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRRPQLPRLLLNQVSCMRNAQQILRNVNVSIHDGGALVLTGTNGSGKTTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTV+DNVQWFEVLEGK G SM
Sbjct: 61  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVLDNVQWFEVLEGKQGGSM 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           +AEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS
Sbjct: 181 VAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 229

[Close]

BLAST of Lsi05G005660.1 vs. NCBI nr
Match: XP_023005528.1 (ABC transporter I family member 1 [Cucurbita maxima])

HSP 1 Score: 441.8 bits (1135), Expect = 3.8e-120
Identity = 219/229 (95.63%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MSLR+PPLPRLLLNQVSCMRNAQQILRNV+VSIHDGSALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVSVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHG+S+
Sbjct: 61  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGKSL 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           P+++LMGLGKLAKEKARMLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           IAEHRKKGGIVIVATHIPI+IEDAMILRLPPRFPRRMTLVDMLDR+DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229

[Close]

BLAST of Lsi05G005660.1 vs. NCBI nr
Match: XP_022936646.1 (ABC transporter I family member 1 [Cucurbita moschata] >XP_023539678.1 ABC transporter I family member 1 [Cucurbita pepo subsp. pepo] >KAG6596893.1 ABC transporter I family member 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030169.1 ABC transporter I family member 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439.1 bits (1128), Expect = 2.5e-119
Identity = 218/229 (95.20%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MSLR+PPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           RPS GEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGK G+S+
Sbjct: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           P+++LMGLGKLAKEKARMLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           IAEHRKKGGIVIVATHIPI+IEDAMILRLPPRFPRRMTLVDMLDR+DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229

[Close]

BLAST of Lsi05G005660.1 vs. NCBI nr
Match: XP_008449132.1 (PREDICTED: ABC transporter I family member 1 [Cucumis melo] >KAA0055846.1 ABC transporter I family member 1 [Cucumis melo var. makuwa] >TYK24070.1 ABC transporter I family member 1 [Cucumis melo var. makuwa])

HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-118
Identity = 218/229 (95.20%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MSLR PPLPRLLL+QVSCMRNAQQILRNVNVSIHDGSALVL+GTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRGPPLPRLLLDQVSCMRNAQQILRNVNVSIHDGSALVLSGTNGSGKTTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           RPSAG ILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFT+IDNVQWFEVLEGKHGRSM
Sbjct: 61  RPSAGRILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTIIDNVQWFEVLEGKHGRSM 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           PAIELMGLG+LAKEKA+MLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGRLAKEKAKMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           IAEHRKKGGIVIVATHIPI+IEDAMILRLPPRFPRR+TL DMLDR DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIDIEDAMILRLPPRFPRRITLADMLDRCDIS 229

[Close]

BLAST of Lsi05G005660.1 vs. TAIR 10
Match: AT1G63270.1 (non-intrinsic ABC protein 10 )

HSP 1 Score: 405.6 bits (1041), Expect = 2.8e-113
Identity = 196/229 (85.59%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 16  MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 75
           MS+RRP +PRLLL  VSCMRNAQQILR+VNVS+HDG ALVLTGTNGSGK+TFLRMLAGFS
Sbjct: 1   MSIRRPQIPRLLLQNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFS 60

Query: 76  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 135
           +PSAGEILWNGHDIT+SG+F QYKLQLNW+SLKDAIKE FTV+DNVQWFE+LE K G++ 
Sbjct: 61  KPSAGEILWNGHDITQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQ 120

Query: 136 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 195
           PA+ELMGLG+L KEK+RMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDD+GV+LLEYI
Sbjct: 121 PALELMGLGRLVKEKSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYI 180

Query: 196 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 245
           IAEHRKKGGIVIVATH+PI+IEDAMILRLPPRFPR+MTL+DMLDR+DIS
Sbjct: 181 IAEHRKKGGIVIVATHLPIDIEDAMILRLPPRFPRKMTLIDMLDRADIS 229

[Close]

BLAST of Lsi05G005660.1 vs. TAIR 10
Match: AT1G67940.1 (non-intrinsic ABC protein 3 )

HSP 1 Score: 80.1 bits (196), Expect = 2.7e-15
Identity = 58/177 (32.77%), Postives = 91/177 (51.41%), Query Frame = 0


Query: 36  NAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSAGEILWNGHDITESGVF 95
           +  +IL+ V + I  G  + + G +GSGK+TFLR L     P    +  +G DIT   V 
Sbjct: 40  DGSRILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVI 99

Query: 96  HQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSMPAIELMGLGKL----AKEKA 155
              + ++  L     + +  TV DNV++   L G+        +L+ L  L    AK+  
Sbjct: 100 -ALRRRVGMLFQLPVLFQG-TVADNVRYGPNLRGEKLSDEEVYKLLSLADLDASFAKKTG 159

Query: 156 RMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKKGGIVIV 209
             LS+GQ +R+ LAR LA +  + LLDEP+ ALD    + +E +I + +K+ GI  V
Sbjct: 160 AELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKQRGITTV 214

[Close]

BLAST of Lsi05G005660.1 vs. TAIR 10
Match: AT5G14100.1 (non-intrinsic ABC protein 14 )

HSP 1 Score: 68.9 bits (167), Expect = 6.3e-12
Identity = 65/225 (28.89%), Postives = 98/225 (43.56%), Query Frame = 0


Query: 14  QPMSLRRPPLPRLLLNQVSCMR----------NAQQILRNVNVSIHDGSALVLTGTNGSG 73
           QP+  RR   PR++    SC+               IL  VN S+ + S  ++ G +GSG
Sbjct: 31  QPLRFRRTKKPRVISCDYSCIEVRDVCYRPPGTQLNILNGVNFSLREKSFGLIFGKSGSG 90

Query: 74  KTTFLRMLAGFSRPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNV-- 133
           KTT L++LAG ++P++G I   G+            L    + +     E F V DNV  
Sbjct: 91  KTTLLQLLAGLNKPTSGSICIQGYGDDGQPKADPDLLPTEKVGIVFQFPERFFVADNVLD 150

Query: 134 ----QW------FEVLEGKHGRSMPAIELMGLGKLAKEK-ARMLSMGQRKRLQLARLLAI 193
                W       ++ E        A   +GL  +  +K  ++LS G ++RL LA  L  
Sbjct: 151 EITFGWPRQKGSLQLKEQLTSNLQRAFNWVGLDSIPLDKDPQLLSGGYKRRLALAIQLVQ 210

Query: 194 DRPIWLLDEPSVALD----DDGVKLLEYIIAEHRKKGGIVIVATH 212
              + +LDEP   LD     D  KLL     +H KK   ++V +H
Sbjct: 211 TPDLLILDEPLAGLDWKARADVAKLL-----KHLKKELTLLVVSH 250

[Close]

BLAST of Lsi05G005660.1 vs. TAIR 10
Match: AT3G62150.1 (P-glycoprotein 21 )

HSP 1 Score: 66.6 bits (161), Expect = 3.1e-11
Identity = 57/195 (29.23%), Postives = 92/195 (47.18%), Query Frame = 0


Query: 35  RNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSAGEILWNGHDITESGV 94
           R  +QI R  ++SI  GS + L G +GSGK+T + ++  F  P +GE+  +G ++ E   
Sbjct: 415 RPEEQIFRGFSLSISSGSTVALVGQSGSGKSTVVSLIERFYDPQSGEVRIDGINLKE--- 474

Query: 95  FHQYKLQLNWL----------------SLKDAI---KENFTVIDNVQWFEVLE-GKHGRS 154
                 QL W+                S+K+ I   KEN TV +  +  E+    K    
Sbjct: 475 -----FQLKWIRSKIGLVSQEPVLFTSSIKENIAYGKENATVEEIRKATELANASKFIDK 534

Query: 155 MPAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEY 210
           +P     GL  +  E    LS GQ++R+ +AR +  D  I LLDE + ALD +  ++++ 
Sbjct: 535 LP----QGLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERIVQE 594

[Close]

BLAST of Lsi05G005660.1 vs. TAIR 10
Match: AT2G47000.1 (ATP binding cassette subfamily B4 )

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-10
Identity = 52/196 (26.53%), Postives = 88/196 (44.90%), Query Frame = 0


Query: 35  RNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSAGEILWNGHDITESGV 94
           R  +QI R  ++ I  G+ + L G +GSGK+T + ++  F  P AG++L +G ++ E   
Sbjct: 396 RPDEQIFRGFSLFISSGTTVALVGQSGSGKSTVVSLIERFYDPQAGDVLIDGINLKE--- 455

Query: 95  FHQYKLQLNWLSLKDAIKENFTVI------DNVQWFEVLEGKHGRSMPAIEL-------- 154
                 QL W+  K  +     V+      DN+ +     GK   +   I+         
Sbjct: 456 -----FQLKWIRSKIGLVSQEPVLFTASIKDNIAY-----GKEDATTEEIKAAAELANAS 515

Query: 155 -------MGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLE 210
                   GL  +  E    LS GQ++R+ +AR +  D  I LLDE + ALD +  ++++
Sbjct: 516 KFVDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERVVQ 575

The following BLAST results are available for this feature:

BLAST of Lsi05G005660.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8T1	4.0e-112	85.59	ABC transporter I family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCI1 PE=2 ...	[more]
Q2VZJ1	9.7e-34	39.70	Cytochrome c biogenesis ATP-binding export protein CcmA OS=Magnetospirillum magn...	[more]
Q2Y9Q1	5.0e-30	37.07	Cytochrome c biogenesis ATP-binding export protein CcmA OS=Nitrosospira multifor...	[more]
Q8XE58	1.4e-29	34.17	Cytochrome c biogenesis ATP-binding export protein CcmA OS=Escherichia coli O157...	[more]
Q0TFP1	1.9e-29	34.36	Cytochrome c biogenesis ATP-binding export protein CcmA OS=Escherichia coli O6:K...	[more]

BLAST of Lsi05G005660.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMH6	1.4e-120	97.38	ABC transporter I family member 1 OS=Momordica charantia OX=3673 GN=LOC111012986...	[more]
A0A6J1L2F3	1.8e-120	95.63	ABC transporter I family member 1 OS=Cucurbita maxima OX=3661 GN=LOC111498491 PE...	[more]
A0A6J1F833	1.2e-119	95.20	ABC transporter I family member 1 OS=Cucurbita moschata OX=3662 GN=LOC111443177 ...	[more]
A0A5A7UNI2	5.9e-119	95.20	ABC transporter I family member 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BLD4	5.9e-119	95.20	ABC transporter I family member 1 OS=Cucumis melo OX=3656 GN=LOC103491084 PE=4 S...	[more]

BLAST of Lsi05G005660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903637.1	9.7e-124	100.00	ABC transporter I family member 1 [Benincasa hispida] >XP_038903638.1 ABC transp...	[more]
XP_022142995.1	2.9e-120	97.38	ABC transporter I family member 1 [Momordica charantia] >XP_022142996.1 ABC tran...	[more]
XP_023005528.1	3.8e-120	95.63	ABC transporter I family member 1 [Cucurbita maxima]	[more]
XP_022936646.1	2.5e-119	95.20	ABC transporter I family member 1 [Cucurbita moschata] >XP_023539678.1 ABC trans...	[more]
XP_008449132.1	1.2e-118	95.20	PREDICTED: ABC transporter I family member 1 [Cucumis melo] >KAA0055846.1 ABC tr...	[more]

BLAST of Lsi05G005660.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63270.1	2.8e-113	85.59	non-intrinsic ABC protein 10	[more]
AT1G67940.1	2.7e-15	32.77	non-intrinsic ABC protein 3	[more]
AT5G14100.1	6.3e-12	28.89	non-intrinsic ABC protein 14	[more]
AT3G62150.1	3.1e-11	29.23	P-glycoprotein 21	[more]
AT2G47000.1	2.0e-10	26.53	ATP binding cassette subfamily B4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 50..238 e-value: 1.3E-14 score: 64.6
IPR005895	ABC transporter, haem export, CcmA	TIGRFAM	TIGR01189	TIGR01189	coord: 28..224 e-value: 2.8E-56 score: 188.3
IPR005895	ABC transporter, haem export, CcmA	PANTHER	PTHR43499	ABC TRANSPORTER I FAMILY MEMBER 1	coord: 24..238
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 41..181 e-value: 9.0E-26 score: 91.0
IPR003439	ABC transporter-like, ATP-binding domain	PROSITE	PS50893	ABC_TRANSPORTER_2	coord: 26..243 score: 15.406307
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 24..223 e-value: 1.6E-41 score: 144.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 24..216

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi05G005660	Lsi05G005660	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G005660.1.exon.1	Lsi05G005660.1.exon.1	exon
Lsi05G005660.1.exon.2	Lsi05G005660.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi05G005660.1.CDS.1	Lsi05G005660.1.CDS.1	CDS
Lsi05G005660.1.CDS.2	Lsi05G005660.1.CDS.2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi05G005660.1	Lsi05G005660.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0055085	transmembrane transport
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0022857	transmembrane transporter activity