Lsi03G013000.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAATTTCTATTTGGTTAAATTTGGAAATTCCCCACAGATTTCATACACCAGTTAGCAAATCTTCTAACCCTCTCTGATCCACCACAAACACCGTTGGGTTACAGCCCTCCATGAATGAACTAGAAGCTTAATGCAGGCGCATTTGCTATTGGGGCCGATCCCCATCCCTATTTCCTCTTCCTCCTCTGCCATCGGTTTCTACTCCTCCCTCATTGCCGATTCCCTTCGCCGGACTTACTCCTACAACCTCAATTCCAAATCAACCATTCCCCTTACTCGATCCAATCCCTTTGTCTGTTCTTGGTCCGCGGCCATTGATGGCGACCGCAACCATTACGAGCTACTCGGGGTCGCTCGTGCTGCCTCCTCCAACGAGATCAAGAAAGCTTTTCGTCTGCTCGCTCGCAAGGTAACTTTGTTTTTATGCTCTTCATTACCAGAATGCTGCATTTGCTGTATCATAGAGGGGCCGAGGTGTCTGATGCAAACTTTCATGCTAGACCCTTGATTTAGAGCCCTTACCCTTGCACTTTGAGTAAATTATGTTGCGTAAAAGAGAGAGCTTGTCTGAAGTCCCATTGTAGAGACCTTCCGAGGATACCTTGAGGGGATGAATAACATCCTCTCCTTTTCTTTGCCTTCGGCCTCTGCTGCTTCCACCTAAGAAAGTCCTTAATATGTCAAAACCTCCGTCCTTCCTTGAGGGCATCCTGTGAGAGTACTAATGGAAGGATATTGGTACTATTAGTAGGATAGTTGTAGGAACTTATGGGTAACTAGTTAATGGTGACTTGAATTTAAATAAGGGGTGTTGGGGTTCTTAGAGGAAATAGATCGTTTTGGTGAAGGATTTTGATAGTGTCCAAATTGGAACTTGGAAGAGAGATAGCCCTCTCGAAAGGCTATTGATATTGTAATGGCTTGTGGTACTGGAATATAGTCCTTTGTTCAAAAATAAAATAAAATTTGTTCTTGTTAGGTGGTATCCTAACACACCTTCACCATATCGAACATATGTCACATTTCTCTGGATCACCCAGTACCTCATAAGCTTGTGCTAACTCCTTTAAAATTTGGGTGACCACCCTTATCATAATGGTTCTTGATAGCGACCCTTTCTATAATTCTTCTTTAGATCGCCTTACAACGCATTCTTCAAGATTCCAAGAATCTCATAGTATTGGATGTTATTGCTCTTCTTGGGCCTTCCAAACATTTTTGCCTCTCCAATCTGATCTCAAAAAACCCTTATAAGTGTGAAAAGGGTGATCTTGAAGTGAAAGATCGGGTAGAGTGTTCGATGACCTGAAAGCTGAGAAATTAAAAGGGTCGTTCAACACATTGAGGTATAGAGAGATTTGCAAGGTAACTCTAAACTGGTATTATCATGATTTTTTGTGTCAACTATTGAATTTAGTCGTTTCTGCTTTAGAATTTCCACTAGAGAAGAGTGGTATGAGACTCTTTTCTAGGAAACTAAGGAAAGTGTGTTGAATCAATTTGAGAATCTAGGATGGTTTGAAAAAAAAATTGAGGTTTGTAATTTGTATAGTTTTGATTTTCTCAATATGTTATGGAACTTGTACCAACACATATCGTGCTTTCTGTTGATTTATAGAAAGCCGATGATGTATGTTTTTGGCCAGGAGTTCTTGGAGGCAGTAATTTAGAAAAAAAAAAAAAAAGGTTTTGGCTTGTGATGGTTCATCTGGATGATGGGGTGCATCTGATGAGAACTAAGTTCTTCATTTCATAAATGGCTGACAAAGAAGAAGAATTTCATCCACTCCAGGATTACACCAACGAGATCCTTGTCTCTTTTTCTTGTTATAATTGTTATAGATGTGTTATGCCGTTTAATCAATCAAGGAGCGTGCTTGGGAAAATTTGGCTTGAGAGGGTGCACCAAAAGCATTTGTAATTTCTAGATGATACAGTGTAAGTTTGTGTGGAAAAGAAACAAAAACTCCAAAGTTTGTATCTTATGAAGTTCTTTCTTTTTTGTTAGAGATATAGGGCCTGAAGGTGAATCTAAACTAGTCAGTGATCTTTGGCATTGATATCAAGAAGGAAACAATCAGGAACATGGATGAATTTTTTGGGTGTGCAGTGTGCATGAGTAAGCATTTTCTGGAAATCTGTGGAAGACAACATCTGAGGGAGATTGTGATATGAACCGCCTGTCAAGATGGATAAATTTTGATTTGTTGAAAGGAGGAAGGGAAATTATTTCACTCAATGCTAGCAGCTAATCCATATAATCTCATGTCTATAGTTCATATGCCAGACAACATGGCAGGAAGAATTCAAATGCTCACAATAACTTTTTTGGGATGGATTGAAGGAAAACTAAGCAACTTGGTAAGGTGGAATTTTTTATGGTATTCAGTGTCTGGGAGTGGGAAACATCATGAAGAAAAATGAGGCACTCCTTTCCAAATGGCTGTAGAGATGATTCCCCTAGGAAAGGATGTGTTGTGGTCAGATGGAAGCAGGTAAAGCCCATGCTGGTCAATTTCTAAAGCCAGACCTTTGGGCTTTCATGGAATTTTCAATATGCATTGGAAGATAACTTCTCCCAAATAACCACTCAAGCAAAGAGCAAAGAAGCTTTTGAAATCAATTTGGTGTATTTGGTTGGATTGAAAAGAAGCAACTGTACATTCAATGGAAATGCGAAAGACTGGAGGGAAGTATTAGTAGCTAGCTAAGTTTTATGTTTCTTTGTGGGTTTCCTAGGAGAATGAGTTCGGGCAAGGCCTACTGTGTTTGTACTGAGTGGTTTTCTCATTGAAACCTTCTACTTCTCATCGATGACCAGTGGATTGGGATTCAGTCCTTGATATAACGTTTCTAGAATTTTTAGTGAGGCAGAAAGGTTGTGCAGAGGGTTTTTGGGATGAAGAGGTAAATGCATGTCAGACCTTTGAGTAGGAACTTGCCAGATGAAGGAATAGGGGAATCTTAAGACTTTGTTGGGGAGATTGGCAGCTTGCAAACCAAAGAAGAACATGCAAGTAGGGTGTTAAAGTAAAATGAGTACCCCAACGGCTCAACCCACAAGCTTGTGTTTAAATTTCTTTTTTCATTTTCCTTGATTATTGATAATCACTTGTTGGACACACTGCTGATTAGTGTTGTTGAGGGGCAATTGGGTACTGCGAGAGACGAGGCCATAGTGCCTTACATGTTACAAGTACCCAAGGCGAGCACTTTCAGCAAGGCGCTCACCTTTTGCGCCTATCAGTTGTCTTGAACAGCGACACAGGCGCCTGCCTTCTTCATTCAACTTAAATCTTCTTCGATTCTTTGGTTAAGAAGAAGTACCAAGGTAGAATTTAAAATAAATAAATAAAAAGAAAAGAAGAGTGAAAGAAGTAGAAACATAACCGAAGATGCCATCTCTTTCTCTTTTATTTAACCATTTATCAGCTGTTTATCAAATTGAAGAAGGGTTGAAAATTGAAATTCAGATCTCAATTTAAAAAATGATTCAAAATATGTTTAGCAATATATCCGTAAACAATAATTTTATTAGTAGTTACCAACTAAATATTTGGTACAATCTTAATTATTATTAATTTGTTTATTAAAATACTTCATATGATAATTTTATATAATTATTATAATACAATATTGTACAATTTATAATATATTATGTTATACTGGTTTAATTTTAACTCAAATAAAATGAGTTTATAACATGAAATAGCATATTTATCAATGTTTTTTTAAGTGTAATTTTGTATTTTATACCTGAAAAAAATCCATTTGTTTTCAGGATTTCTACTATTTGGATCATAGAAATTCATCAAACAAATATTCTCTAAATTCATTTGATTTAGTGAATTGAGACAAAATCCAAATTGCATACCAACAAGCTGTGAATCTACCCGTGCATCAACTTAGGCATTTAGGTTCATTGGTGAATTTGATACTTTAAGCAATTTCTCAATCACATCCGTGGTAAGAAAATTAATAGAAAATGATGATGAATTCTTAGAGCAAAATTTATTTGTGGATAGGAAGTTCCTAAAAAGAGGAGTTCTCTCTCTCTCTCTCTCTCTCTCCTTATTCTTGTTCTTCTTTGGAGAAGCTTGGAGAAAGTGCCCAAACTGGGCTGTCTCCAAATTGGTGCCTTTTGTGTAAGACATGAGAAATATTTAGAGGCATATTTTGTTTCACTTTCAGATTAGCTCGAAATGATGGTATTTTATTCTGAACCTCCTGAATATAGGGTGAGTGGTTAACTCCTCAATAAAAAATAACCTTGAACAGGCTACTTCACTTGAACAAGATTTGTTCTATAGCTTGTACAACCGTATCCTTGACTTCTTAGAAAACGAACCTTGAACAGATGGCTGGACTATACTAGAAAAAGAAGCAGCTGAAGATTGCGTGAGAAAACCTTATTGAAGTTTTATTATGGGAAGTTTGTGTTGAAACGCAAGAGTTTTGTAAGTTAGAAAAGAAACTGAGAAGATGTCTTGAAAAGTCTAAACAGCCTAAACTTAATGCTACTTTTTGGTGATCTTTTTATAAAAATTTTACTTTTTAATGGGGTTTAGTTCCAGCTGACGCTCTTCTTTGTCTTCTTGTTTTCGTTTTATCTCATGATCATAACTTCAATTTAGAAGAAACTTTAACTATAGAGGGTTTCCTTGTGCTTATTATCTTGCATCAACTCTATCTATGAATTGTTTTAGAGGATCGGACTGCAGGATTTTCTTTCAGTACGTCTTCCTTAATGCTATTGGTGCGATAATATTATGTGGCTCCTACAAATGATATCCACTCACGTGATGTAATTTTACTCTGAACTGCAGTATCATCCTGATGTTAGCAAGGATTCACGAGCAGCTGATGCATTCAAGAGCATACGTCATGCATATGAGGTGAGAATTCTTTATACCAAAATTTCATTTTATAGCTTTGTTGTAATAGGGATTATTTAATTTTACAATCCACGAAATCTTGGTGAAGTCAAAAGCAGGCATTGGCCAATTATTAGAGGGTAGGAGAATATATGTTCTTAAGTTGAGAAAACATGCTTGTGCTTACTGATTAGTGGAAGTGTTTGGTTTCTTTGGTGTTTATTCAGGTAACTTTCCATAATTTATTGATGTAAGAATGACTTGTAATTTCTTTTTCCCTGAAATTTTAATGTGTTATGCTCACTGACTGGTGGGAGATGTTTGTTTTCTCCTACGTTTATTGATGGTAAGTTGCAAGAATTTAATTTCTTGTGTTCTCCTTTCCCTTGGGATTTTAGTTTTTTTTGTTATTGGAAAATTGAATCCACATGTGTCAGTATGAACCTGTAAATCACTTTTTGATACCGATTAATTAAGCTTGAAAACAAATCTTTTAGGGTGGAAACTCTGTTAGTCGGTCAAAAGATTTGATGTCATTCTTTGGCTAATAACCAGAAACCTCACCATTTGCTCCATGTTTTCTTTCTGAACAGGTATTAGCCAATGAAGTGACGAGAGCTCAGTATGACCGAGCATTAAAACTTCAAGAAAGTACTGACAGGCGATACAGAGGAAAGTGGTATTATACTCCTGATTTTGAAGAAAGATCAAGAACCTATAGATGGACTGAACTGAAGCAAAAGATACAGTATGAAAGATATCAGAAATATTATAGATTTCGAGAGGATTCTTCCCGCATTGATGAAGATGATGAGGGGGAAGGAAGCAGCAGCAGCAGCCAACTTAGAAGCCCCTTCCTAGAAGTACTGAAATCGACATTCCTATCTTTACTTTTACTACAAATGTTCGGGTCCCGATTGTCGCTCACCTTTAGCAGCCTGGTGGCATTGCTCGACCGGAAGTTGGATTCGGGATATAAGATCGGGTATGTAATTGCATGGCTTTTGGGTGGAAGGGCAGGCGTTTTACTAGCTATATGCCTCTCATTTGCAAGCTGGGTATGTGGGAAAAGTAGCAGTAGTGTAGTTGCTGTTGTGGTAGTGGCGATGTGGGTGGGAACAAATCTTGCAAGATATGCACCACTTCCTCAAGGAGCTGTTCTTACACTTCTGTATATGTCCATCAAGCTTCAAGCTGATTTGAAATGAAGTTGAAACTTGTACTTGCCAAGCAGAGAAGGTGTACATATGGCTGTTTTATATGCTTCATGTTCAAACACTGCACATAAAAATGGCAATGGTAGGTGCAATATTAGTTCGCTTGGAGTTAGGTTCATATTATGTGAAAGTGTTTGACCAATTTTAGATGTTTATGTGTACAGCAAGCATCTTTGTGATGTGTAAATTTTAGTGGTGTATAAAAAAAAGAAAAAAAAGTTTATATTAGTGTTACCACTGTTCTTGTTTGCTTCATCTTATGATTTGTTTATAGTAAGAAGAGAAGTTTTGAGTTGGAAATCAATAGCCTGAA CTAATTTCTATTTGGTTAAATTTGGAAATTCCCCACAGATTTCATACACCAGTTAGCAAATCTTCTAACCCTCTCTGATCCACCACAAACACCGTTGGGTTACAGCCCTCCATGAATGAACTAGAAGCTTAATGCAGGCGCATTTGCTATTGGGGCCGATCCCCATCCCTATTTCCTCTTCCTCCTCTGCCATCGGTTTCTACTCCTCCCTCATTGCCGATTCCCTTCGCCGGACTTACTCCTACAACCTCAATTCCAAATCAACCATTCCCCTTACTCGATCCAATCCCTTTGTCTGTTCTTGGTCCGCGGCCATTGATGGCGACCGCAACCATTACGAGCTACTCGGGGTCGCTCGTGCTGCCTCCTCCAACGAGATCAAGAAAGCTTTTCGTCTGCTCGCTCGCAAGTATCATCCTGATGTTAGCAAGGATTCACGAGCAGCTGATGCATTCAAGAGCATACGTCATGCATATGAGGTATTAGCCAATGAAGTGACGAGAGCTCAGTATGACCGAGCATTAAAACTTCAAGAAAGTACTGACAGGCGATACAGAGGAAAGTGGTATTATACTCCTGATTTTGAAGAAAGATCAAGAACCTATAGATGGACTGAACTGAAGCAAAAGATACAGTATGAAAGATATCAGAAATATTATAGATTTCGAGAGGATTCTTCCCGCATTGATGAAGATGATGAGGGGGAAGGAAGCAGCAGCAGCAGCCAACTTAGAAGCCCCTTCCTAGAAGTACTGAAATCGACATTCCTATCTTTACTTTTACTACAAATGTTCGGGTCCCGATTGTCGCTCACCTTTAGCAGCCTGGTGGCATTGCTCGACCGGAAGTTGGATTCGGGATATAAGATCGGGTATGTAATTGCATGGCTTTTGGGTGGAAGGGCAGGCGTTTTACTAGCTATATGCCTCTCATTTGCAAGCTGGGTATGTGGGAAAAGTAGCAGTAGTGTAGTTGCTGTTGTGGTAGTGGCGATGTGGGTGGGAACAAATCTTGCAAGATATGCACCACTTCCTCAAGGAGCTGTTCTTACACTTCTGTATATGTCCATCAAGCTTCAAGCTGATTTGAAATGAAGTTGAAACTTGTACTTGCCAAGCAGAGAAGGTGTACATATGGCTGTTTTATATGCTTCATGTTCAAACACTGCACATAAAAATGGCAATGGTAGGTGCAATATTAGTTCGCTTGGAGTTAGGTTCATATTATGTGAAAGTGTTTGACCAATTTTAGATGTTTATGTGTACAGCAAGCATCTTTGTGATGTGTAAATTTTAGTGGTGTATAAAAAAAAGAAAAAAAAGTTTATATTAGTGTTACCACTGTTCTTGTTTGCTTCATCTTATGATTTGTTTATAGTAAGAAGAGAAGTTTTGAGTTGGAAATCAATAGCCTGAA ATGCAGGCGCATTTGCTATTGGGGCCGATCCCCATCCCTATTTCCTCTTCCTCCTCTGCCATCGGTTTCTACTCCTCCCTCATTGCCGATTCCCTTCGCCGGACTTACTCCTACAACCTCAATTCCAAATCAACCATTCCCCTTACTCGATCCAATCCCTTTGTCTGTTCTTGGTCCGCGGCCATTGATGGCGACCGCAACCATTACGAGCTACTCGGGGTCGCTCGTGCTGCCTCCTCCAACGAGATCAAGAAAGCTTTTCGTCTGCTCGCTCGCAAGTATCATCCTGATGTTAGCAAGGATTCACGAGCAGCTGATGCATTCAAGAGCATACGTCATGCATATGAGGTATTAGCCAATGAAGTGACGAGAGCTCAGTATGACCGAGCATTAAAACTTCAAGAAAGTACTGACAGGCGATACAGAGGAAAGTGGTATTATACTCCTGATTTTGAAGAAAGATCAAGAACCTATAGATGGACTGAACTGAAGCAAAAGATACAGTATGAAAGATATCAGAAATATTATAGATTTCGAGAGGATTCTTCCCGCATTGATGAAGATGATGAGGGGGAAGGAAGCAGCAGCAGCAGCCAACTTAGAAGCCCCTTCCTAGAAGTACTGAAATCGACATTCCTATCTTTACTTTTACTACAAATGTTCGGGTCCCGATTGTCGCTCACCTTTAGCAGCCTGGTGGCATTGCTCGACCGGAAGTTGGATTCGGGATATAAGATCGGGTATGTAATTGCATGGCTTTTGGGTGGAAGGGCAGGCGTTTTACTAGCTATATGCCTCTCATTTGCAAGCTGGGTATGTGGGAAAAGTAGCAGTAGTGTAGTTGCTGTTGTGGTAGTGGCGATGTGGGTGGGAACAAATCTTGCAAGATATGCACCACTTCCTCAAGGAGCTGTTCTTACACTTCTGTATATGTCCATCAAGCTTCAAGCTGATTTGAAATGA MQAHLLLGPIPIPISSSSSAIGFYSSLIADSLRRTYSYNLNSKSTIPLTRSNPFVCSWSAAIDGDRNHYELLGVARAASSNEIKKAFRLLARKYHPDVSKDSRAADAFKSIRHAYEVLANEVTRAQYDRALKLQESTDRRYRGKWYYTPDFEERSRTYRWTELKQKIQYERYQKYYRFREDSSRIDEDDEGEGSSSSSQLRSPFLEVLKSTFLSLLLLQMFGSRLSLTFSSLVALLDRKLDSGYKIGYVIAWLLGGRAGVLLAICLSFASWVCGKSSSSVVAVVVVAMWVGTNLARYAPLPQGAVLTLLYMSIKLQADLK Homology
BLAST of Lsi03G013000.1 vs. ExPASy Swiss-Prot
Match: A7GT07 (Chaperone protein DnaJ OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98) OX=315749 GN=dnaJ PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.7e-15 Identity = 38/64 (59.38%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. ExPASy Swiss-Prot
Match: Q8CXD3 (Chaperone protein DnaJ OS=Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831) OX=221109 GN=dnaJ PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 5.9e-15 Identity = 37/66 (56.06%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. ExPASy Swiss-Prot
Match: B7IYG6 (Chaperone protein DnaJ OS=Bacillus cereus (strain G9842) OX=405531 GN=dnaJ PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14 Identity = 36/64 (56.25%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. ExPASy Swiss-Prot
Match: B7HCT9 (Chaperone protein DnaJ OS=Bacillus cereus (strain B4264) OX=405532 GN=dnaJ PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14 Identity = 36/64 (56.25%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. ExPASy Swiss-Prot
Match: Q818F0 (Chaperone protein DnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) OX=226900 GN=dnaJ PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14 Identity = 36/64 (56.25%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. ExPASy TrEMBL
Match: A0A5A7U5Y0 (DnaJ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2143G00410 PE=4 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 8.0e-148 Identity = 287/319 (89.97%), Postives = 297/319 (93.10%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. ExPASy TrEMBL
Match: A0A1S3CNI5 (uncharacterized protein LOC103502970 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502970 PE=4 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 8.0e-148 Identity = 287/319 (89.97%), Postives = 297/319 (93.10%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. ExPASy TrEMBL
Match: A0A0A0LG96 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G843760 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 1.2e-143 Identity = 280/319 (87.77%), Postives = 294/319 (92.16%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. ExPASy TrEMBL
Match: A0A6J1I535 (dnaJ homolog subfamily C member 18 OS=Cucurbita maxima OX=3661 GN=LOC111470754 PE=4 SV=1) HSP 1 Score: 505.0 bits (1299), Expect = 2.3e-139 Identity = 270/318 (84.91%), Postives = 289/318 (90.88%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. ExPASy TrEMBL
Match: A0A6J1EWU4 (J domain-containing protein DDB_G0295729 OS=Cucurbita moschata OX=3662 GN=LOC111439119 PE=4 SV=1) HSP 1 Score: 503.4 bits (1295), Expect = 6.8e-139 Identity = 272/323 (84.21%), Postives = 291/323 (90.09%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. NCBI nr
Match: XP_038906025.1 (uncharacterized protein LOC120091928 [Benincasa hispida]) HSP 1 Score: 561.2 bits (1445), Expect = 5.7e-156 Identity = 302/319 (94.67%), Postives = 304/319 (95.30%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. NCBI nr
Match: XP_008465321.1 (PREDICTED: uncharacterized protein LOC103502970 isoform X1 [Cucumis melo] >KAA0051283.1 DnaJ domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 533.1 bits (1372), Expect = 1.6e-147 Identity = 287/319 (89.97%), Postives = 297/319 (93.10%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. NCBI nr
Match: XP_004141138.1 (uncharacterized protein LOC101205024 [Cucumis sativus] >KGN59757.1 hypothetical protein Csa_001397 [Cucumis sativus]) HSP 1 Score: 519.2 bits (1336), Expect = 2.5e-143 Identity = 280/319 (87.77%), Postives = 294/319 (92.16%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. NCBI nr
Match: XP_022972121.1 (dnaJ homolog subfamily C member 18 [Cucurbita maxima]) HSP 1 Score: 505.0 bits (1299), Expect = 4.8e-139 Identity = 270/318 (84.91%), Postives = 289/318 (90.88%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. NCBI nr
Match: XP_022932616.1 (J domain-containing protein DDB_G0295729 [Cucurbita moschata]) HSP 1 Score: 503.4 bits (1295), Expect = 1.4e-138 Identity = 272/323 (84.21%), Postives = 291/323 (90.09%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. TAIR 10
Match: AT5G18140.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 280.0 bits (715), Expect = 2.3e-75 Identity = 164/337 (48.66%), Postives = 225/337 (66.77%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. TAIR 10
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 72.8 bits (177), Expect = 5.7e-13 Identity = 34/68 (50.00%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. TAIR 10
Match: AT2G22360.1 (DNAJ heat shock family protein ) HSP 1 Score: 70.9 bits (172), Expect = 2.2e-12 Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. TAIR 10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 69.7 bits (169), Expect = 4.8e-12 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of Lsi03G013000.1 vs. TAIR 10
Match: AT1G80030.3 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 69.7 bits (169), Expect = 4.8e-12 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|