Lsi02G027360.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G027360.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr02: 33639143 .. 33644520 (+)
Sequence length849
RNA-Seq ExpressionLsi02G027360.1
SyntenyLsi02G027360.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAATGTCCAGAGAAGATGTACGCTTCCTCCGCATTGCTCTTCCAAGTCCCAATATTAGTCCTAACGCCATTTCCCAAGTTAATCACCTCGATCAAACAAAAGAACAGTACCAGAACGCTTTCTGAAACTTCTTCTGCTAGGTTATCTATCGGACGGGTCCGTGCGTCTTCGCGGGGTTTAAGCGGCGTCGGAGTTATCCTACGGCGGTGGAATTTAAACTCGCTGAAGGGAAGAGATGAATAGGTTACAGAATCGTTGAACCTATGGCGGCAGCGGCTAGTATCAGTGGGAATAGGACAGGAAGACAGAGAGAGAGAGAGCCAGAGCCAGAGCTAGAGGAGAAGAAAAAGAAAAACAAAGGTTATTAATTTTTTTTCTTTCTTTTTTATTTATCGGTGTGTATCCCTTTAAATCATTCTTCACCATATTGTGTGAAACATAATTTGAGTTAATTAAACTTTTAATTTTGATAAGTTAATCAATTAAAATTATTTATTATCGTTATTTTAAATTTCATCAATATATTAATTTTCAAATATGTATGACTTCTTCAAATATCAATTTAATAAAATGGACGATTAAAGCAAATACATGAACAATTGTCAAAGAATCTAAATTGATTTATTTATGAAAGTCTAGTGATTGAATTGATACAATTATGAGTTTCACAAGATTTTCTCAAACAGAATATAATAAAGGAAATTGATATATTAACAAAAGTTTAGGGGTATAAATTGATAATTTTTTGAAGTTTAGGAGTAGAAGTTTTAACTTCCAACCTCACATGTCATTTGCTGTTTGTTCGTTTTTTTTTTCCATTTCCTTTGAGGAAACAATCAACAATAAAACTAAGTACAGAATTACATCCAAAGAAATAAATGACTCAAACCAGTTAGAGTAAGGAAATAAGAGAAGAGAAGAAGCTTGCTCATCCAATGCCCTTGGCGCCAACATATGGGCCAGAACGTTGTTCAAACGACGAATATGTTTAAAGGAAACATTGCTCAACTCTTGTGCATAAGACTTAGCATCAATGATGAAAAAGGAGACTTAAATAAGATCTAAATAACTACCACTCAACATATTAGCAACCTCCAAGAGTTTGACTCTACAATGATGAGTTGTACATTGATAGAGATAGTATTAAAGAGTTCTTCACGAATAGCCCTCGCTTCAAGAACCTTAACTTCATTGCTTCTTTTGATAAACTTAAGACTAATAAGTAGAGAAGAGAGGGAAAAGGAGAGGAAGAGAGAGAGAGAGAAATGAGATTTTTTTTTCCTTTGCAATACAACAAATTGTGGTAGTGTAGATTTTAACCTTAGTCTTGGTTACATGTCACTTTGACGAGAAAAGAAATAGTTAGTTAGGTCATTCTTGTAAAAATTATTATTAATAAAGGTTGCCACAATGCAATTAACAGTTTTACACTATTAGATGTATGAGAGAAACTACAAAACTAATCTATACCGACTCCAATCGAGTGGATATTATGAGGTAGGTTTTTTAAATTACATAGAACATTTATTAAGAGACACCCACATTATAGTATTTTATTTTTAAAAAAATCATTTTTACCCACTATTAATTAATGAAAAAAGAAATATTTTCAAAATTAAGTTTAAAGATGAATTAATTCTAGTTCTGGAAATTTCAAATTTATGTTTAAAACATTTTTAAGATCCTTAAAACTTTCAAATTCATTTTTTATAGATTTTCAAACTTTAAAAGTATCTAATTGATCACTACACACTTGCAACTTTGTGTCTAATAATTTATTGGTACACTGAAGATTCTTAAACTTTAATCGATTTATTATATATAAATTTAAATTTTACAGGTAGTACATTCTTATAATATTTTTGGGTAATAGTGATGAGTAGCAATTTTAAGAGCAATAACCAATTGTATAGCAACATTTTAAAAAAATTACAAATATAGCAAAGTCTATCACGGATAAAATTTGCTAAATTTACAACTTTTAAAATATTGTCATATATATTAATACTTTGAATCTAATTGCTATATTTGTTATTCTATTAGACAAAATTAAAGTGTCAAGGCCTCTAAAACATAAAGCTGAAAGTTTAGATTATATTAAACTTTTAGTCTGATATTGAAACTATGTGAAATGAACATTCATTTATAATGAAACGAAGTTTTCAGCGCCTCTTAATTCATTGATTCAAAATAATGTCTATAGGTCAACCTCACAATATAAACTACAACAACACTCGTCAGAGTCTCCAATTAAGATAAAAGGGAAGAAATACCAAACATATTCCATCATTTTGATTCTACTGAAACTTTAATAAAAAAATATTTGGATTAACTTTTTAAGCGCTTAAAAACATCTATTTATAGGTACTTAAAAAGTCAATCCAAACAAGTTTTAAGTTAGTCGAGTGCGAAGCTACTAAGTAGCATCGCCGGTGATCTCCGTTAACTTGAAGGGATTAAAGAAGATGGAGTTGGACCATAACTTCCCACAACCTGAGAGTTAGCAGAAAAGAAACACTATTGTGGCTGAATCCAGTCAGTGAGTGTTTTTCTTTTCCGTTTTGTTTGAGCCTTTTGGCTTTGTTCCTCCTCTGAATTTCGCTTCAACTTCTCCAAATCTTCTTCACTTATCAAACCCTTCAATCTTTTGTTTAGTTCGTATGCTTCACCCATCTTTTTTCTGCATTCTTTGATAGCTATATCATGTGACACCACTGAAAAAGAAAGAAAAAGAAATATGGTAGACATGAGTAATTGATGTGGTGATCCAACGCAATCAACCAAAAAGAAACGAATCATTAATTCAGGAAGATGCAGCAAAATTCGAAGTGTGTTATAAAAATTACTCCTTTTATCTATCTCCTAATAGAAAAGGCTCGTGATAATATTTCTCACTTTCTTGAGAACCCATACCTGATCGTATTAGACTATTTACATCTCTTGACAAGACCAATTATATAAAAGATTGTTTTGAGAAGTAAGCTCTGGCAAGACGTTGTCAAAAGTTGACTTGCTTGCAGGGTTTAATAGACATGTAATGACCAATTAAATACAGGGGAATGAAGAGAGAATGTCCTTATAGTAGATGGAAACAGTTGATATGAACCATATGTAAATCAGAATAGAGGAATAGGCAAAACTAATAGAATCGATTTTGGACGATTTAAGGAGACGTTCTGACAGCTACCAGAGTCTGACCACTTACAGCTTTTTACCCTTTCAAATATTGTTTGCTGTTTATTCCTAAAAGGTATGATATATAATGCTTCCGATCAAAAGGGATAGATAATGGTTAACTGAAATAACCGTCAGAACTAACCTGGATTTGGGTAATCTTTACCAATGATGCATTTTGCTTTCTTTTGAATGCTGAGAGGAGCTGTCCATGGCTCATATATGTACTGCTTGGGCATATCTATCAATCAAAAGTTGGATTTCATAACGGTAAAATATAGCACAACATCAATCATGATGAAAGATGAGGAATTTATGATATGCTAGAGAAATTGATTTGAAATCATTATATTCTTTTTCTTCTTTTTGCAGAACTATTTTTGAAAACTACTATTTACAAGCACGATTTGCAAATTCAACTTATTTATCCTAGAAAGACAATAATGACAATACAATAAATATATCTTTTTTACAAAAAAAAAAAAAAAAAAAAACATTTTAAAATGAACTGTAGGAAAGTTTATGACATTAAAAAACAGAACCTTTCAATTAATAGTTTCCAAACAAACCCTTTGTTTACCTTTTAATACTGGAAGAAAATGCCTGATGAAGTCACCGTTTGGGTCATACTTCTTTCCGAATGTGACTGGAGAGTATATACGATTATACTGACAACCAAAGACAACCAGCAAGATCATTAAATGTAAAAGCGAAGTATTGCAACAAAAAGAGAAAATTATGATTCTAGCATTTAGTTAAAAAAATTGGCCCAGATGATCCAACAAGTAAAAGCAATTCACCAAATTTAAAGCCACAAGTCCGCTCAATGCTTACAACACTCTAAACCAGGATCATTTCATGTACCTCATAATGGTGAAAGAGGATCTATGTTACACACTTACACTTTTATGAGAAACAATTTTATATTGATGAAGTTCCCGACAAAAGAAGGGGGAGAAAAAACTAAGATTCTAACATCAAGACAGTTACTAAGATTCGAATCAAACCTGATAAAAAAATGATGAACACGATAACCACAACCAATTTGCATTGTTAATGACCCAATCTGAATCAATCAGAAGCCTCTCGAACACATCACGTCCTTTCTCCCAGTGAACAAACTATGCAGAGGGGAAAAAATGAAATATAATATAATGACATCAAGATAAACTAGAATTCAGTGGCCCACATTTCCCAAGCTAAGTCACATACCAGATCTCCGCGAGTTAGGAAACATGCAACACAATGTCGTGCTAGGTGGTGCATCCAACCCCATTTGCGAAGCTAAAAATAAATAAAAATTAAATTAAAAATAAATAAATAACTGTTTTGCTATCATATGACCAAGTAGACTTTTGCTCACCTACCCTATATATATAGATAGTAATGTAAAAGGATAAACCAAACTAACCTGAACCATGATAGCATCAATCCAAGGAAATCCTGTCCTTGCATCTCTCCAAGCCGCCAAGAGTTCATTATCATCATTCCAAGGTATCTACATATTCATTTAACCACTTTAGCACATACAACCTTAAGTAGACAACATAATCCTACCAGGTCCTCTTGTTGCCTTACTGTTAACGTCAAGCCTGATATTTGAATAGTCATAAATGTCTTTTCACAACTCTTCTAATTCAGTAGCAACTGGATTTAGGTTATTCTCCTCAAATGATTAATAAACTACATTTACAGGATGAGGATGGTTTCCTAATTACTCACATCCTACTTCTACTGTATCCAATGATGAAAAGTACTCGGGAATCTTCAATCGTTTGTGACATCCAAATCTTGCATATCCGTAATGCTGAAGCTAAAATATTTCAATGCAAGTTGGGACAGATACTGTTGAAGATTAAAAAATCTTTAAAACATCGAGAAACTAGAGTTCTAGTGCAGTTGTATGCTAATCCACAAGAAAAGTCCATCAAGTTTTAAACCAGATACAAGGTTACTGATCTGAAATGTTGGAACCAGTTTCATTGTGCAAGATTAGAGTTCATAACATATCATATTGAAGTGCGAATATATGATCCATTCACTTCTTTGCATGCAGGCTACAATTATATGCAACATCACAGTCACCACCAGAACTGTATCTCAAAGGAGGAAGTCAGAGATGTATAATTAAATATCTATTTCACTGGCAAAAAGATTGGGCAAGGTCCTTAATTCAGATGAAGGGAAGAGATGTGTAA

mRNA sequence

ATGAAAGAATGTCCAGAGAAGATGTACGCTTCCTCCGCATTGCTCTTCCAAGTCCCAATATTAGTCCTAACGCCATTTCCCAAGTTAATCACCTCGATCAAACAAAAGAACAGTACCAGAACGCTTTCTGAAACTTCTTCTGCTAGGTTATCTATCGGACGGAAAAGAAACACTATTGTGGCTGAATCCAGTCATTCGTATGCTTCACCCATCTTTTTTCTGCATTCTTTGATAGCTATATCATGTGACACCACTGAAAAAGAAAGAAAAAGAAATATGGTAGACATGAAAAAGGCTCGTGATAATATTTCTCACTTTCTTGAGAACCCATACCTGATCGGTTTAATAGACATGAAATCCTGTCCTTGCATCTCTCCAAGCCGCCAAGAGTTCATTATCATCATTCCAAGGTATCTACATATTCATTTAACCACTTTAGCACATACAACCTTAAGTAGACAACATAATCCTACCAGGTCCTCTTGTTGCCTTACTGTTAACGATGAGGATGGTTTCCTAATTACTCACATCCTACTTCTACTGTATCCAATGATGAAAAGTACTCGGGAATCTTCAATCGTTTGTGACATCCAAATCTTGCATATCCGTAATGCTGAAGCTAAAATATTTCAATGCAAGTTGGGACAGATACTGTTGAAGATTAAAAAATCTTTAAAACATCGAGAAACTAGAGTTCTAGTGCAGTTGCTACAATTATATGCAACATCACAGTCACCACCAGAACTGTATCTCAAAGGAGGAAGTCAGAGATGTATAATTAAATATCTATTTCACTGGCAAAAAGATTGGGCAAGGTCCTTAATTCAGATGAAGGGAAGAGATGTGTAA

Coding sequence (CDS)

ATGAAAGAATGTCCAGAGAAGATGTACGCTTCCTCCGCATTGCTCTTCCAAGTCCCAATATTAGTCCTAACGCCATTTCCCAAGTTAATCACCTCGATCAAACAAAAGAACAGTACCAGAACGCTTTCTGAAACTTCTTCTGCTAGGTTATCTATCGGACGGAAAAGAAACACTATTGTGGCTGAATCCAGTCATTCGTATGCTTCACCCATCTTTTTTCTGCATTCTTTGATAGCTATATCATGTGACACCACTGAAAAAGAAAGAAAAAGAAATATGGTAGACATGAAAAAGGCTCGTGATAATATTTCTCACTTTCTTGAGAACCCATACCTGATCGGTTTAATAGACATGAAATCCTGTCCTTGCATCTCTCCAAGCCGCCAAGAGTTCATTATCATCATTCCAAGGTATCTACATATTCATTTAACCACTTTAGCACATACAACCTTAAGTAGACAACATAATCCTACCAGGTCCTCTTGTTGCCTTACTGTTAACGATGAGGATGGTTTCCTAATTACTCACATCCTACTTCTACTGTATCCAATGATGAAAAGTACTCGGGAATCTTCAATCGTTTGTGACATCCAAATCTTGCATATCCGTAATGCTGAAGCTAAAATATTTCAATGCAAGTTGGGACAGATACTGTTGAAGATTAAAAAATCTTTAAAACATCGAGAAACTAGAGTTCTAGTGCAGTTGCTACAATTATATGCAACATCACAGTCACCACCAGAACTGTATCTCAAAGGAGGAAGTCAGAGATGTATAATTAAATATCTATTTCACTGGCAAAAAGATTGGGCAAGGTCCTTAATTCAGATGAAGGGAAGAGATGTGTAA

Protein sequence

MKECPEKMYASSALLFQVPILVLTPFPKLITSIKQKNSTRTLSETSSARLSIGRKRNTIVAESSHSYASPIFFLHSLIAISCDTTEKERKRNMVDMKKARDNISHFLENPYLIGLIDMKSCPCISPSRQEFIIIIPRYLHIHLTTLAHTTLSRQHNPTRSSCCLTVNDEDGFLITHILLLLYPMMKSTRESSIVCDIQILHIRNAEAKIFQCKLGQILLKIKKSLKHRETRVLVQLLQLYATSQSPPELYLKGGSQRCIIKYLFHWQKDWARSLIQMKGRDV
Homology
The following BLAST results are available for this feature:
BLAST of Lsi02G027360.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi02G027360.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi02G027360.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi02G027360.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi02G027360Lsi02G027360gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi02G027360.1.exon.1Lsi02G027360.1.exon.1exon
Lsi02G027360.1.exon.2Lsi02G027360.1.exon.2exon
Lsi02G027360.1.exon.3Lsi02G027360.1.exon.3exon
Lsi02G027360.1.exon.4Lsi02G027360.1.exon.4exon
Lsi02G027360.1.exon.5Lsi02G027360.1.exon.5exon
Lsi02G027360.1.exon.6Lsi02G027360.1.exon.6exon
Lsi02G027360.1.exon.7Lsi02G027360.1.exon.7exon
Lsi02G027360.1.exon.8Lsi02G027360.1.exon.8exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi02G027360.1.CDS.1Lsi02G027360.1.CDS.1CDS
Lsi02G027360.1.CDS.2Lsi02G027360.1.CDS.2CDS
Lsi02G027360.1.CDS.3Lsi02G027360.1.CDS.3CDS
Lsi02G027360.1.CDS.4Lsi02G027360.1.CDS.4CDS
Lsi02G027360.1.CDS.5Lsi02G027360.1.CDS.5CDS
Lsi02G027360.1.CDS.6Lsi02G027360.1.CDS.6CDS
Lsi02G027360.1.CDS.7Lsi02G027360.1.CDS.7CDS
Lsi02G027360.1.CDS.8Lsi02G027360.1.CDS.8CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi02G027360.1Lsi02G027360.1-proteinpolypeptide