Lsi02G012220.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G012220.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWound-induced protein 1
Locationchr02: 15872780 .. 15873400 (+)
Sequence length522
RNA-Seq ExpressionLsi02G012220.1
SyntenyLsi02G012220.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTCCTTGTCCTTCCTACAGACTGTATATAAAGGATCACCCATAGGCCTACAAAACCTCAACATTCTTAACTCCATCATTATTTCCCAGGGAAAATTATTTAACTAACCGCCCCTCCGGCAGCCTGTGATCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAGAGGGAGAGCGTTCGGAGAGTGAGGGCCCTTTACAAGGCGTTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAATACTTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTCGTCTTCGCCCCAATCTCCGTCGTCCCATTTGGGCCCACTGTCGTGCTGGCGGAAGGCTACGACACAAAACGCGCCGTTTCGTGGGTCCACGCCTGGACCATTACTGATGGGATAATCACTCACGTGAAGGAATATCTCAACACCTCTGTTACCGTCAAGCGCTTCGCCTCCGCCGCGGACGGGGATTCGCCGTCCGCATCGCTGCCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTGTGGGGAGAATCGGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG

mRNA sequence

ATGCAGTCCTTGTCCTTCCTACAGACTCCTGTGATCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAGAGGGAGAGCGTTCGGAGAGTGAGGGCCCTTTACAAGGCGTTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAATACTTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTCGTCTTCGCCCCAATCTCCGTCGTCCCATTTGGGCCCACTGTCGTGCTGGCGGAAGGCTACGACACAAAACGCGCCGTTTCGTGGGTCCACGCCTGGACCATTACTGATGGGATAATCACTCACGTGAAGGAATATCTCAACACCTCTGTTACCGTCAAGCGCTTCGCCTCCGCCGCGGACGGGGATTCGCCGTCCGCATCGCTGCCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTGTGGGGAGAATCGGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG

Coding sequence (CDS)

ATGCAGTCCTTGTCCTTCCTACAGACTCCTGTGATCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAGAGGGAGAGCGTTCGGAGAGTGAGGGCCCTTTACAAGGCGTTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAATACTTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTCGTCTTCGCCCCAATCTCCGTCGTCCCATTTGGGCCCACTGTCGTGCTGGCGGAAGGCTACGACACAAAACGCGCCGTTTCGTGGGTCCACGCCTGGACCATTACTGATGGGATAATCACTCACGTGAAGGAATATCTCAACACCTCTGTTACCGTCAAGCGCTTCGCCTCCGCCGCGGACGGGGATTCGCCGTCCGCATCGCTGCCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTGTGGGGAGAATCGGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG

Protein sequence

MQSLSFLQTPVIGITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSASLPPNCQSVWQSKVWGESVVPALVLAL
Homology
BLAST of Lsi02G012220.1 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.7e-21
Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = 0

Query: 70  MRLLTG----ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEY 129
           MR+LTG    +SSSF F P+SVV FG TV+ AEG D   ++SW+HAWT+ +GIIT V+EY
Sbjct: 1   MRVLTGGVSPSSSSFEFVPLSVVSFGSTVI-AEGCDAATSISWIHAWTVANGIITQVREY 60

Query: 130 LNTSVTVKRFASAADGDSPSASLPP-NCQSVWQSKVWGES--VVPALVLAL 174
            NTS+TV R  +   G   +   PP +C SVW+S+  G +   VP LVLA+
Sbjct: 61  SNTSLTVTRIGNVVAGRRSAEIAPPSHCSSVWESQFSGRAGKPVPGLVLAI 110

BLAST of Lsi02G012220.1 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.8e-16
Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 0

Query: 70  MRLLTGA----SSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEY 129
           M++LTG     ++SF F   ++  FG +VVL EG D  R+++WVHAWT+TDG+IT V+EY
Sbjct: 1   MQILTGTAKFDNASFQFLHKTIDVFG-SVVLVEGCDPTRSITWVHAWTVTDGVITQVREY 60

Query: 130 LNTSVTVKRFASAADGDSPSASLPP-NCQSVWQSKV---WGESVVPALVLAL 174
            NTS+TV RF     G S  +S+   +C SVW+S +    G+S VP LVLAL
Sbjct: 61  FNTSLTVTRF-----GKSDISSITTLHCPSVWESSLPNRVGKS-VPGLVLAL 105

BLAST of Lsi02G012220.1 vs. ExPASy TrEMBL
Match: A0A5A7UY51 (Putative Senescence associated protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00340 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.5e-76
Identity = 144/172 (83.72%), Postives = 157/172 (91.28%), Query Frame = 0

Query: 3   SLSFLQTPVIGITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHG 62
           +LSF+  P + ITKLAN EWS EQRESV RVRALY+ALG+KDVETVHRLLAPDLEWWFHG
Sbjct: 12  NLSFIIQPFVAITKLANPEWSPEQRESVGRVRALYEALGTKDVETVHRLLAPDLEWWFHG 71

Query: 63  PPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHV 122
           PPSHQYLMRLLTGASSSFVFAPIS+VP GPT+VLAEG+  KRAVSWVHAWTITDG+ITHV
Sbjct: 72  PPSHQYLMRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHV 131

Query: 123 KEYLNTSVTVKRFASAA-DGDSPSASLPPNCQSVWQSKVWGESVVPALVLAL 174
           KEYLNTSVTVKRF+SAA DGDSPS S PPNC+S+WQSKVW ES +PALVLAL
Sbjct: 132 KEYLNTSVTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRES-MPALVLAL 182

BLAST of Lsi02G012220.1 vs. ExPASy TrEMBL
Match: A0A061GYQ0 (Senescence associated gene 20, putative OS=Theobroma cacao OX=3641 GN=TCM_042245 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.4e-45
Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 0

Query: 18  ANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGAS 77
           A  E   E+  + R VRALY AL S+DVETVHRLLA DLEWWFHGPPSHQ+LMRLLTG++
Sbjct: 83  ARLEGQEEEYSNERVVRALYDALNSRDVETVHRLLAADLEWWFHGPPSHQHLMRLLTGST 142

Query: 78  SSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFAS 137
             F+F P+ V  FG ++V+ EGY+ +R VSWVHAWT+T+GIIT V+EY NTS+TV R  S
Sbjct: 143 EPFIFVPLRVAAFG-SLVIVEGYNKERDVSWVHAWTVTNGIITQVREYFNTSLTVARL-S 202

Query: 138 AADGDSPSASLPP----NCQSVWQSKVWGESVVPALVLAL 174
            ++G  PS S  P    NCQS+WQSK+  +  VP LVLAL
Sbjct: 203 NSEGGPPSISSAPTVLANCQSIWQSKLCDDKAVPGLVLAL 240

BLAST of Lsi02G012220.1 vs. ExPASy TrEMBL
Match: A0A1U7ZU64 (uncharacterized protein LOC104597350 OS=Nelumbo nucifera OX=4432 GN=LOC104597350 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.5e-44
Identity = 100/165 (60.61%), Postives = 120/165 (72.73%), Query Frame = 0

Query: 14  ITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLL 73
           + +LA S+ S E+  S+R VRALY ALG +DVET+ RLLAPD+EWWFHGPPSHQY+MRLL
Sbjct: 81  LPELATSQASLEEESSIRVVRALYDALGVRDVETIQRLLAPDIEWWFHGPPSHQYMMRLL 140

Query: 74  TGASS--SFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVT 133
           TG SS  SFVF P+S   FG T VL EG D  R+VSWVHAWT+ DGIIT V+EY +TS+T
Sbjct: 141 TGVSSDESFVFVPLSFAAFGST-VLVEGCDQNRSVSWVHAWTVADGIITQVREYFDTSLT 200

Query: 134 VKRFASAADGDSPSASLPPNCQSVWQS---KVWGESVVPALVLAL 174
           V RF  +  G SPS+S    C  +WQS   K  G+S VP LVLA+
Sbjct: 201 VSRFGKS--GPSPSSSSSIRCPHLWQSQFTKATGKS-VPGLVLAI 241

BLAST of Lsi02G012220.1 vs. ExPASy TrEMBL
Match: A0A2N9EI45 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2202 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 7.6e-44
Identity = 103/172 (59.88%), Postives = 122/172 (70.93%), Query Frame = 0

Query: 16  KLANSEWSSEQRE-SVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLT 75
           +LANS+ S E++E + R V ALYKAL SKD + V RLLAPDLEWWFHGPP+HQ+LMRLLT
Sbjct: 5   QLANSQASLEEQEPNERVVTALYKALSSKDFDEVQRLLAPDLEWWFHGPPNHQHLMRLLT 64

Query: 76  GAS--SSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTV 135
           G+S   SFVF P S+V FG T VL EGYD +R+VSWVHAWT+TDGIIT V+EY NTSV V
Sbjct: 65  GSSKEDSFVFVPQSIVAFGST-VLVEGYDKERSVSWVHAWTVTDGIITQVREYFNTSVIV 124

Query: 136 KRFASA----ADGDSPSASLPP-------NCQSVWQSKVWGESVVPALVLAL 174
            RF  +      G S + S P         CQSVW+SK+   + VP LVLAL
Sbjct: 125 ARFGDSKGQGVGGASQTISSPAVTLKSVNKCQSVWESKLCDNNSVPGLVLAL 175

BLAST of Lsi02G012220.1 vs. ExPASy TrEMBL
Match: A0A6A1WK91 (Wound-induced protein 1 OS=Morella rubra OX=262757 GN=CJ030_MR1G008920 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.9e-43
Identity = 104/169 (61.54%), Postives = 118/169 (69.82%), Query Frame = 0

Query: 14  ITKLANSEWSSEQ--RESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMR 73
           + +L NS+ S E+    + R V ALYKAL SK  + V RLLAPDLEWWFHGPP HQ+LM 
Sbjct: 22  LPELENSQASLEEEGERNRRLVTALYKALSSKGFDEVQRLLAPDLEWWFHGPPDHQHLMH 81

Query: 74  LLTGASS---SFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNT 133
           LLTG+SS   SFVF P SVV FG T VL EGYD +R+VSWVHAWT+TDGIIT V+EY NT
Sbjct: 82  LLTGSSSPNNSFVFVPQSVVAFGST-VLVEGYDKERSVSWVHAWTVTDGIITQVREYFNT 141

Query: 134 SVTVKRFASAADGDSPSASLPP----NCQSVWQSKVWGESVVPALVLAL 174
           SVTV RF S     S  AS P      CQSVWQS++  ES  P LVLAL
Sbjct: 142 SVTVARFGSHPISSSDVASQPEPAIHKCQSVWQSQLSDES-APGLVLAL 188

BLAST of Lsi02G012220.1 vs. NCBI nr
Match: KAA0059984.1 (putative Senescence associated protein 20 [Cucumis melo var. makuwa] >TYJ97243.1 putative Senescence associated protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 293.1 bits (749), Expect = 1.6e-75
Identity = 144/172 (83.72%), Postives = 157/172 (91.28%), Query Frame = 0

Query: 3   SLSFLQTPVIGITKLANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHG 62
           +LSF+  P + ITKLAN EWS EQRESV RVRALY+ALG+KDVETVHRLLAPDLEWWFHG
Sbjct: 12  NLSFIIQPFVAITKLANPEWSPEQRESVGRVRALYEALGTKDVETVHRLLAPDLEWWFHG 71

Query: 63  PPSHQYLMRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHV 122
           PPSHQYLMRLLTGASSSFVFAPIS+VP GPT+VLAEG+  KRAVSWVHAWTITDG+ITHV
Sbjct: 72  PPSHQYLMRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHV 131

Query: 123 KEYLNTSVTVKRFASAA-DGDSPSASLPPNCQSVWQSKVWGESVVPALVLAL 174
           KEYLNTSVTVKRF+SAA DGDSPS S PPNC+S+WQSKVW ES +PALVLAL
Sbjct: 132 KEYLNTSVTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRES-MPALVLAL 182

BLAST of Lsi02G012220.1 vs. NCBI nr
Match: KAG7037026.1 (Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.0 bits (650), Expect = 4.7e-64
Identity = 138/174 (79.31%), Postives = 147/174 (84.48%), Query Frame = 0

Query: 11  VIGITKLANSEWSSEQRE-SVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYL 70
           ++G TKLANSE  SEQ E SV  V ALY+AL SKDVETVHRLLAPDLEWWFHGPPSHQYL
Sbjct: 7   LVGNTKLANSESPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYL 66

Query: 71  MRLLTG-ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNT 130
           MRLLTG +SSSFVFAPIS+V FGPT VLAEGYDTKRAVSWVHAWTITDG+ITHVKEYLNT
Sbjct: 67  MRLLTGVSSSSFVFAPISIVAFGPT-VLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNT 126

Query: 131 SVTVKRFASAADGDSPSASLP---------PNCQSVWQSKVWGESVVPALVLAL 174
           SVTVKRFA+AAD +SPS+S P          NCQSVWQSKV GES VP LVLAL
Sbjct: 127 SVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGES-VPGLVLAL 178

BLAST of Lsi02G012220.1 vs. NCBI nr
Match: KAG6607351.1 (Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.0 bits (650), Expect = 4.7e-64
Identity = 138/174 (79.31%), Postives = 147/174 (84.48%), Query Frame = 0

Query: 11  VIGITKLANSEWSSEQRE-SVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYL 70
           ++G TKLANSE  SEQ E SV  V ALY+AL SKDVETVHRLLAPDLEWWFHGPPSHQYL
Sbjct: 23  LVGNTKLANSESPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYL 82

Query: 71  MRLLTG-ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNT 130
           MRLLTG +SSSFVFAPIS+V FGPT VLAEGYDTKRAVSWVHAWTITDG+ITHVKEYLNT
Sbjct: 83  MRLLTGVSSSSFVFAPISIVAFGPT-VLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNT 142

Query: 131 SVTVKRFASAADGDSPSASLP---------PNCQSVWQSKVWGESVVPALVLAL 174
           SVTVKRFA+AAD +SPS+S P          NCQSVWQSKV GES VP LVLAL
Sbjct: 143 SVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGES-VPGLVLAL 194

BLAST of Lsi02G012220.1 vs. NCBI nr
Match: XP_038893485.1 (senescence associated gene 20-like [Benincasa hispida])

HSP 1 Score: 193.4 bits (490), Expect = 1.7e-45
Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0

Query: 70  MRLLTGASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTS 129
           MRLLTGASSSFVFAPISVVPFG TVVLAEGY+TKRAVSWVHAWT+TDG+ITHVKEYLNTS
Sbjct: 1   MRLLTGASSSFVFAPISVVPFGATVVLAEGYNTKRAVSWVHAWTVTDGVITHVKEYLNTS 60

Query: 130 VTVKRFASA--ADGDSPSASLPPNCQSVWQSKVWGESVVPALVLAL 174
           VTVKRFASA   DGDSPS S PPNCQSVWQSKVWG+SVVPALVLAL
Sbjct: 61  VTVKRFASAVDGDGDSPSTSPPPNCQSVWQSKVWGKSVVPALVLAL 106

BLAST of Lsi02G012220.1 vs. NCBI nr
Match: XP_017982445.1 (PREDICTED: uncharacterized protein LOC18591051 [Theobroma cacao])

HSP 1 Score: 191.8 bits (486), Expect = 4.9e-45
Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 0

Query: 18  ANSEWSSEQRESVRRVRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGAS 77
           A  E   E+  + R VRALY AL S+DVETVHRLLA DLEWWFHGPPSHQ+LMRLLTG++
Sbjct: 91  ARLEGQEEEYSNERVVRALYDALNSRDVETVHRLLAADLEWWFHGPPSHQHLMRLLTGST 150

Query: 78  SSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFAS 137
             F+F P+ V  FG ++V+ EGY+ +R VSWVHAWT+T+GIIT V+EY NTS+TV R  S
Sbjct: 151 EPFIFVPLRVAAFG-SLVIVEGYNKERDVSWVHAWTVTNGIITQVREYFNTSLTVARL-S 210

Query: 138 AADGDSPSASLPP----NCQSVWQSKVWGESVVPALVLAL 174
            ++G  PS S  P    NCQS+WQSK+  +  VP LVLAL
Sbjct: 211 NSEGGPPSISSAPTVLANCQSIWQSKLCDDKAVPGLVLAL 248

BLAST of Lsi02G012220.1 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 )

HSP 1 Score: 102.1 bits (253), Expect = 4.7e-22
Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = 0

Query: 70  MRLLTG----ASSSFVFAPISVVPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEY 129
           MR+LTG    +SSSF F P+SVV FG TV+ AEG D   ++SW+HAWT+ +GIIT V+EY
Sbjct: 1   MRVLTGGVSPSSSSFEFVPLSVVSFGSTVI-AEGCDAATSISWIHAWTVANGIITQVREY 60

Query: 130 LNTSVTVKRFASAADGDSPSASLPP-NCQSVWQSKVWGES--VVPALVLAL 174
            NTS+TV R  +   G   +   PP +C SVW+S+  G +   VP LVLA+
Sbjct: 61  SNTSLTVTRIGNVVAGRRSAEIAPPSHCSSVWESQFSGRAGKPVPGLVLAI 110

BLAST of Lsi02G012220.1 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 101.7 bits (252), Expect = 6.2e-22
Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 0

Query: 33  VRALYKALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG---ASSSFVFAP--ISV 92
           +  LYKAL   D  TV +++A D+EWWFHGP   Q++MRLLTG      SF F P  + V
Sbjct: 22  IELLYKALQQGDTSTVTKVVASDVEWWFHGPHDCQHMMRLLTGEPPRQVSFRFEPSSVQV 81

Query: 93  VPFGPTVVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKRFASAADGDSPSAS 152
           V  G   V+AEG++  R V WVH W + DG++T ++EY NT +TV  ++  A G      
Sbjct: 82  VVPGHDCVIAEGWEGSR-VYWVHVWKLKDGVVTELREYFNTWLTVTDYSLGAVGWDMG-- 141

Query: 153 LPPNCQSVWQS--KVWGESVVPALVLAL 174
               C +VW+S  +      +P+L+LA+
Sbjct: 142 ---RC-TVWESVPRDLARGSLPSLLLAI 162

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94AK66.7e-2150.45Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1[more]
P201443.8e-1648.21Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7UY517.5e-7683.72Putative Senescence associated protein 20 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A061GYQ02.4e-4560.00Senescence associated gene 20, putative OS=Theobroma cacao OX=3641 GN=TCM_042245... [more]
A0A1U7ZU641.5e-4460.61uncharacterized protein LOC104597350 OS=Nelumbo nucifera OX=4432 GN=LOC104597350... [more]
A0A2N9EI457.6e-4459.88Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2202 PE=4 SV=1[more]
A0A6A1WK914.9e-4361.54Wound-induced protein 1 OS=Morella rubra OX=262757 GN=CJ030_MR1G008920 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0059984.11.6e-7583.72putative Senescence associated protein 20 [Cucumis melo var. makuwa] >TYJ97243.1... [more]
KAG7037026.14.7e-6479.31Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyros... [more]
KAG6607351.14.7e-6479.31Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_038893485.11.7e-4590.57senescence associated gene 20-like [Benincasa hispida][more]
XP_017982445.14.9e-4560.00PREDICTED: uncharacterized protein LOC18591051 [Theobroma cacao][more]
Match NameE-valueIdentityDescription
AT3G10985.14.7e-2250.45senescence associated gene 20 [more]
AT5G01740.16.2e-2240.54Nuclear transport factor 2 (NTF2) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 17..139
e-value: 1.3E-12
score: 49.7
NoneNo IPR availablePANTHERPTHR33703:SF19WOUND-INDUCED PROTEIN, WUN1-RELATEDcoord: 22..173
IPR009798Wound-induced protein Wun1-likePFAMPF07107WI12coord: 70..173
e-value: 1.9E-28
score: 98.7
IPR009798Wound-induced protein Wun1-likePANTHERPTHR33703OS07G0691300 PROTEINcoord: 22..173
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 30..133

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi02G012220Lsi02G012220gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi02G012220.1.exon.1Lsi02G012220.1.exon.1exon
Lsi02G012220.1.exon.2Lsi02G012220.1.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi02G012220.1.CDS.1Lsi02G012220.1.CDS.1CDS
Lsi02G012220.1.CDS.2Lsi02G012220.1.CDS.2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi02G012220.1Lsi02G012220.1-proteinpolypeptide