Lsi01G009770.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G009770.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function (DUF1685)
Location	chr01: 8032385 .. 8033644 (+)
Sequence length	815
RNA-Seq Expression	Lsi01G009770.1
Synteny	Lsi01G009770.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACTTGCATTTTCTTGCGAAAGAAAGGGAATTTTGATTTTTTATTTTCTTAGTTTCACGGAAAAATTATGGAACAAACTTGGGAAAAAAAGGCAGAACGGCGACAGGTCAGCATGACGAGGACCAACCAAAGTTGAATTCTTTACCACTGGCCCTGGCCCACCACCACCACCGCCTATATTCCCCTTTCTGCTCTACTTCCTTAACAAATCCCCCTTTTCCCATATCGATTCCAACTCCTCTCTCCGGCGAGGTCTCCGGACCCCCGGCGGTGCATCACATGTCGGATTCCGCCGACCACCGCCTACCGCCTCCGCCCTTAACACGCCCTTTCCCACTCTACAAGCAGCTGTCCTGGTCGCCGGATGCCGACCGCGAGGAAGCCTGGCTCCGCCGCAAAACTCAAAGCAAGATGCGCCGGACCAAGAGCGTGACCGACGATGATCTCGAAGAACTCAAAGCCTGCGTTGAGTTGGGCTTCGGATTCAACTCACCGGAGGTGGACCCTCGGCTCTGTGAAACTTTTCCGGCGTTGGGCTTTTACCATGCTGTTAATAAGCAGTACAATCGTACGCTCTCGAACTTGTCGGCCTCTCTCTGCTCTTCCCCTGTTTCTGAATCTGTTTCTCCCTCTCCTGAGAACAGCCCCGCCGCCATAATCAACCACGGTATGTTGCCTTTTTTATATCCCTTGTGAAATTGAATGGTGAAAATTGTTTTGATTTTGATTTTATCTGTTTGGACGTGGGAAATTTCGAACTGGGTTTTCAGGGGAGAATCCACAGATGGTGAAAACAAGGCTGAAACAATGGGCGCAGGTGGTTGCTTGTTCAGTAAGGCAGTATTGATTCTTGCTAATCAATTTCATCACCAAATTTGTATTATGTTTTTCTTTTTTCTTTCTTAGACTTTTGTTTCTGACTTAACTATAAATTCTAATCAATACATACAAATTTAACCCTCAATTAGCCAAAGTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTCTTGAATTCTCTGTTTCTGAAATTCTGTTGTCAAATGGGCTCCAAAGTTCATACATTATAAATTATATTCATCGAACACGAGGAATTGGAAGAATGTGGAGGCAGGTTGCTGTATCTTCCACACGCATCCTTTTCACATTATCTTTAGATATTTTCAGTTTCTGAAATCATGTGGGAAACGCAAGGGATTACTTGTGGATTCAGAATTTGAGGATGACAAGTTTGAGCGGTACACAAACTGA

mRNA sequence

CAAACTTGCATTTTCTTGCGAAAGAAAGGGAATTTTGATTTTTTATTTTCTTAGTTTCACGGAAAAATTATGGAACAAACTTGGGAAAAAAAGGCAGAACGGCGACAGGTCAGCATGACGAGGACCAACCAAAGTTGAATTCTTTACCACTGGCCCTGGCCCACCACCACCACCGCCTATATTCCCCTTTCTGCTCTACTTCCTTAACAAATCCCCCTTTTCCCATATCGATTCCAACTCCTCTCTCCGGCGAGGTCTCCGGACCCCCGGCGGTGCATCACATGTCGGATTCCGCCGACCACCGCCTACCGCCTCCGCCCTTAACACGCCCTTTCCCACTCTACAAGCAGCTGTCCTGGTCGCCGGATGCCGACCGCGAGGAAGCCTGGCTCCGCCGCAAAACTCAAAGCAAGATGCGCCGGACCAAGAGCGTGACCGACGATGATCTCGAAGAACTCAAAGCCTGCGTTGAGTTGGGCTTCGGATTCAACTCACCGGAGGTGGACCCTCGGCTCTGTGAAACTTTTCCGGCGTTGGGCTTTTACCATGCTGTTAATAAGCAGTACAATCGTACGCTCTCGAACTTGTCGGCCTCTCTCTGCTCTTCCCCTGTTTCTGAATCTGTTTCTCCCTCTCCTGAGAACAGCCCCGCCGCCATAATCAACCACGGGGAGAATCCACAGATGGTGAAAACAAGGCTGAAACAATGGGCGCAGGTGGTTGCTTGTTCATTTCTGAAATCATGTGGGAAACGCAAGGGATTACTTGTGGATTCAGAATTTGAGGATGACAAGTTTGAGCGGTACACAAACTGA

Coding sequence (CDS)

ATGTCGGATTCCGCCGACCACCGCCTACCGCCTCCGCCCTTAACACGCCCTTTCCCACTCTACAAGCAGCTGTCCTGGTCGCCGGATGCCGACCGCGAGGAAGCCTGGCTCCGCCGCAAAACTCAAAGCAAGATGCGCCGGACCAAGAGCGTGACCGACGATGATCTCGAAGAACTCAAAGCCTGCGTTGAGTTGGGCTTCGGATTCAACTCACCGGAGGTGGACCCTCGGCTCTGTGAAACTTTTCCGGCGTTGGGCTTTTACCATGCTGTTAATAAGCAGTACAATCGTACGCTCTCGAACTTGTCGGCCTCTCTCTGCTCTTCCCCTGTTTCTGAATCTGTTTCTCCCTCTCCTGAGAACAGCCCCGCCGCCATAATCAACCACGGGGAGAATCCACAGATGGTGAAAACAAGGCTGAAACAATGGGCGCAGGTGGTTGCTTGTTCATTTCTGAAATCATGTGGGAAACGCAAGGGATTACTTGTGGATTCAGAATTTGAGGATGACAAGTTTGAGCGGTACACAAACTGA

Protein sequence

MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELKACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPENSPAAIINHGENPQMVKTRLKQWAQVVACSFLKSCGKRKGLLVDSEFEDDKFERYTN

Homology

[Close]

BLAST of Lsi01G009770.1 vs. ExPASy TrEMBL
Match: A0A0A0KIC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490880 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 139/150 (92.67%), Postives = 146/150 (97.33%), Query Frame = 0


Query: 1   MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELK 60
           MSDSADHRLPPPPLTRPFPLYKQ SWSPDADR++AWLRRKTQSKMRR+KSVTDDDLEELK
Sbjct: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPE 120
           AC+ELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSN SASLCSSPVSESVSPS +
Sbjct: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120

Query: 121 NSPAAIINHGENPQMVKTRLKQWAQVVACS 151
           +SPAAII+HGENPQMVK RLKQWAQVVACS
Sbjct: 121 SSPAAIISHGENPQMVKARLKQWAQVVACS 150

[Close]

BLAST of Lsi01G009770.1 vs. ExPASy TrEMBL
Match: A0A5D3CRC3 (Membrane insertase YidC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004830 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.7e-73
Identity = 136/150 (90.67%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELK 60
           MSDSADHRLPPPP +RPFPLYKQ SWSPDADR++AW+RRKTQSKMRR+KSVTDDDLEELK
Sbjct: 1   MSDSADHRLPPPPFSRPFPLYKQHSWSPDADRDQAWVRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPE 120
           ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSN SASLCSSPVS+SVSPS +
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSDSVSPSAD 120

Query: 121 NSPAAIINHGENPQMVKTRLKQWAQVVACS 151
            SPAAII+HGENPQMVK RLKQWAQVVACS
Sbjct: 121 GSPAAIISHGENPQMVKARLKQWAQVVACS 150

[Close]

BLAST of Lsi01G009770.1 vs. ExPASy TrEMBL
Match: A0A6J1IVC7 (uncharacterized protein LOC111478729 OS=Cucurbita maxima OX=3661 GN=LOC111478729 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.4e-66
Identity = 127/150 (84.67%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELK 60
           MSD+ D R PPP L RPFPLYK LSWSPDADREEAWLRRKTQSK+RR+KSVTDDD EELK
Sbjct: 1   MSDTDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPE 120
           ACVELGFGFNSPEVDPRLCETFPALGFYHAVNK Y RTLSN S SLCSSPVS+S+SPS +
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLSPSAQ 120

Query: 121 NSPAAIINHGENPQMVKTRLKQWAQVVACS 151
           +SPAAII+ GENPQ VK RLKQWAQVVACS
Sbjct: 121 SSPAAIISLGENPQTVKARLKQWAQVVACS 150

[Close]

BLAST of Lsi01G009770.1 vs. ExPASy TrEMBL
Match: A0A6J1GDR3 (uncharacterized protein LOC111453248 OS=Cucurbita moschata OX=3662 GN=LOC111453248 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65
Identity = 127/150 (84.67%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELK 60
           MSD+ D R PPP L RPFPLYK LSWSPDADREEAWLRRKTQSK+RR+KSVTDDD EELK
Sbjct: 1   MSDTDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPE 120
           ACVELGFGFNSPEVDPRLCETFPALGFYHAVNK Y RTLSN SASLCSSPVS+ +SPS +
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDFLSPSAQ 120

Query: 121 NSPAAIINHGENPQMVKTRLKQWAQVVACS 151
           +SPAAII+ GENPQ VK RLKQWAQVVACS
Sbjct: 121 SSPAAIISLGENPQTVKARLKQWAQVVACS 150

[Close]

BLAST of Lsi01G009770.1 vs. ExPASy TrEMBL
Match: A0A6J1KLU9 (uncharacterized protein LOC111496895 OS=Cucurbita maxima OX=3661 GN=LOC111496895 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.4e-63
Identity = 125/150 (83.33%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 1   MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELK 60
           MS SAD R   PP+ RPFPLYKQLSWSPDADRE+AWLRRK QSKMRR+KSVTDDDLEELK
Sbjct: 1   MSGSADQR--KPPIARPFPLYKQLSWSPDADREDAWLRRKAQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPE 120
           ACVELGFGFNSPEVDPRLCET PAL FY AVNK YN +LSN SASLCSSP S SVSPS +
Sbjct: 61  ACVELGFGFNSPEVDPRLCETLPALSFYQAVNKNYNHSLSNSSASLCSSPGSGSVSPSAQ 120

Query: 121 NSPAAIINHGENPQMVKTRLKQWAQVVACS 151
           +SPAAII+HGENPQ VK RLKQWAQVVACS
Sbjct: 121 SSPAAIISHGENPQTVKARLKQWAQVVACS 148

[Close]

BLAST of Lsi01G009770.1 vs. NCBI nr
Match: XP_004141915.1 (uncharacterized protein LOC101216565 [Cucumis sativus] >KGN48524.1 hypothetical protein Csa_004412 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 139/150 (92.67%), Postives = 146/150 (97.33%), Query Frame = 0


Query: 1   MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELK 60
           MSDSADHRLPPPPLTRPFPLYKQ SWSPDADR++AWLRRKTQSKMRR+KSVTDDDLEELK
Sbjct: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPE 120
           AC+ELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSN SASLCSSPVSESVSPS +
Sbjct: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120

Query: 121 NSPAAIINHGENPQMVKTRLKQWAQVVACS 151
           +SPAAII+HGENPQMVK RLKQWAQVVACS
Sbjct: 121 SSPAAIISHGENPQMVKARLKQWAQVVACS 150

[Close]

BLAST of Lsi01G009770.1 vs. NCBI nr
Match: TYK12889.1 (Membrane insertase YidC [Cucumis melo var. makuwa])

HSP 1 Score: 284.6 bits (727), Expect = 5.6e-73
Identity = 136/150 (90.67%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELK 60
           MSDSADHRLPPPP +RPFPLYKQ SWSPDADR++AW+RRKTQSKMRR+KSVTDDDLEELK
Sbjct: 1   MSDSADHRLPPPPFSRPFPLYKQHSWSPDADRDQAWVRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPE 120
           ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSN SASLCSSPVS+SVSPS +
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSDSVSPSAD 120

Query: 121 NSPAAIINHGENPQMVKTRLKQWAQVVACS 151
            SPAAII+HGENPQMVK RLKQWAQVVACS
Sbjct: 121 GSPAAIISHGENPQMVKARLKQWAQVVACS 150

[Close]

BLAST of Lsi01G009770.1 vs. NCBI nr
Match: XP_038881139.1 (uncharacterized protein LOC120072737 [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 6.2e-72
Identity = 138/150 (92.00%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELK 60
           MSDSADHR PP  LTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRR+KSVTDDDLEELK
Sbjct: 1   MSDSADHRPPPSSLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPE 120
           ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSN SASLCSSPVS+SVSPS  
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSDSVSPSSV 120

Query: 121 NSPAAIINHGENPQMVKTRLKQWAQVVACS 151
           NSPAAII++GENPQ VK RLKQWAQVVACS
Sbjct: 121 NSPAAIISYGENPQTVKARLKQWAQVVACS 150

[Close]

BLAST of Lsi01G009770.1 vs. NCBI nr
Match: KAG7034341.1 (hypothetical protein SDJN02_04068, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.2 bits (666), Expect = 6.7e-66
Identity = 128/150 (85.33%), Postives = 136/150 (90.67%), Query Frame = 0


Query: 1   MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELK 60
           MSD+ D R PPP L RPFPLYK LSWSPDADREEAWLRRKTQSK+RR+KSVTDDD EELK
Sbjct: 1   MSDTDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPE 120
           ACVELGFGFNSPEVDPRLCETFPALGFYHAVNK Y RTLSN SASLCSSPVS+S+SPS +
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYCRTLSNSSASLCSSPVSDSLSPSAQ 120

Query: 121 NSPAAIINHGENPQMVKTRLKQWAQVVACS 151
           +SPAAII+ GENPQ VK RLKQWAQVVACS
Sbjct: 121 SSPAAIISLGENPQTVKARLKQWAQVVACS 150

[Close]

BLAST of Lsi01G009770.1 vs. NCBI nr
Match: XP_023544597.1 (uncharacterized protein LOC111804129 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-65
Identity = 128/150 (85.33%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MSDSADHRLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSKMRRTKSVTDDDLEELK 60
           MSD  D R PPP L RPFPLYK LSWSPDADREEAWLRRKTQSK+RR+KSVTDDD EELK
Sbjct: 1   MSDIDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPE 120
           ACVELGFGFNSPEVDPRLCETFPALGFYHAVNK Y RTLSN SASLCSSPVS+S+SPS +
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDSLSPSAQ 120

Query: 121 NSPAAIINHGENPQMVKTRLKQWAQVVACS 151
           +SPAAII+ GENPQ VK RLKQWAQVVACS
Sbjct: 121 SSPAAIISLGENPQTVKARLKQWAQVVACS 150

[Close]

BLAST of Lsi01G009770.1 vs. TAIR 10
Match: AT4G33985.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 154.1 bits (388), Expect = 1.1e-37
Identity = 84/146 (57.53%), Postives = 105/146 (71.92%), Query Frame = 0


Query: 17  PFPLYKQLSWSPDADREEAWLRRK---TQSKMRRTKSVTDDDLEELKACVELGFGF--NS 76
           P PL KQ SWSPDADREEAWLR+K   +  ++ R+KSVTD+DLEELK C+ELGFGF  +S
Sbjct: 12  PRPLVKQHSWSPDADREEAWLRKKGKQSLGRLGRSKSVTDEDLEELKGCIELGFGFEPDS 71

Query: 77  PEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPENSPAAIINHGE 136
           P++DPRL ET PALG Y AVNKQY+  LS  S+   SS  SE  +    NS   I++ G+
Sbjct: 72  PDLDPRLSETLPALGLYCAVNKQYSSRLSRTSS--LSSIASEGEN---SNSSTTIVDQGD 131

Query: 137 NPQMVKTRLKQWAQVVACSFLKSCGK 158
           +P+ +K RLKQWAQVVACS  +  G+
Sbjct: 132 DPETMKLRLKQWAQVVACSVKQFSGE 152

[Close]

BLAST of Lsi01G009770.1 vs. TAIR 10
Match: AT2G15590.2 (Protein of unknown function (DUF1685) )

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-29
Identity = 72/148 (48.65%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 17  PFPLYKQLSWSPDADREEAWLRRKTQ---SKMRRTKSVTDDDLEELKACVELGFGF--NS 76
           P PL KQ SWSPD  REEAWLR+K +     + R+KSVT+DD+EELK C ELGFGF   S
Sbjct: 9   PRPLMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEELKGCFELGFGFETES 68

Query: 77  PEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPENSPAAIINHGE 136
           P+++PRL  T PAL  Y AV++QY+  LS  S+      VS S      N+   I++ G+
Sbjct: 69  PDLNPRLSHTIPALDLYCAVHRQYSNHLSRTSSFASDHEVSNS------NNITTIVDKGD 128

Query: 137 NPQMVKTRLKQWAQVVACSFLKSCGKRK 160
           + + +K +LKQWA+VV  S   S GK K
Sbjct: 129 DRKTMKQKLKQWAKVVGFSVRHSSGKPK 150

[Close]

BLAST of Lsi01G009770.1 vs. TAIR 10
Match: AT3G50350.2 (Protein of unknown function (DUF1685) )

HSP 1 Score: 122.9 bits (307), Expect = 2.6e-28
Identity = 71/141 (50.35%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 18  FPLYKQLSWSPDADREEAWLRRKTQSK---MRRTKSVTDDDLEELKACVELGFGFNSPE- 77
           + L  Q SWSPD  REEAW +R+  S+   +RR KS+TD+DL+ELKA  ELGFGF SPE 
Sbjct: 33  YHLNTQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLDELKASFELGFGFGSPEN 92

Query: 78  VDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSPSPENSPAAIINHGENP 137
            DPRL  T PAL  Y AV K YN  +SN S +  SS      SP        +    ++P
Sbjct: 93  ADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDTSPH-----HTVYQTSDDP 152

Query: 138 QMVKTRLKQWAQVVACSFLKS 155
           Q VKT+LKQWA+VVAC+  +S
Sbjct: 153 QTVKTKLKQWARVVACTVNQS 168

[Close]

BLAST of Lsi01G009770.1 vs. TAIR 10
Match: AT2G15590.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 104.4 bits (259), Expect = 9.7e-23
Identity = 56/103 (54.37%), Postives = 69/103 (66.99%), Query Frame = 0


Query: 17  PFPLYKQLSWSPDADREEAWLRRKTQ---SKMRRTKSVTDDDLEELKACVELGFGF--NS 76
           P PL KQ SWSPD  REEAWLR+K +     + R+KSVT+DD+EELK C ELGFGF   S
Sbjct: 9   PRPLMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEELKGCFELGFGFETES 68

Query: 77  PEVDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSES 115
           P+++PRL  T PAL  Y AV++QY+  LS  S+      VS S
Sbjct: 69  PDLNPRLSHTIPALDLYCAVHRQYSNHLSRTSSFASDHEVSNS 111

[Close]

BLAST of Lsi01G009770.1 vs. TAIR 10
Match: AT3G50350.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21
Identity = 61/114 (53.51%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 8   RLPPPPLTRPFPLYKQLSWSPDADREEAWLRRKTQSK---MRRTKSVTDDDLEELKACVE 67
           R+  PPL     L KQ SWSPD  REEAW +R+  S+   +RR KS+TD+DL+ELKA  E
Sbjct: 28  RIHAPPLPST-SLLKQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLDELKASFE 87

Query: 68  LGFGFNSPE-VDPRLCETFPALGFYHAVNKQYNRTLSNLSASLCSSPVSESVSP 118
           LGFGF SPE  DPRL  T PAL  Y AV K YN  +SN S +  SS      SP
Sbjct: 88  LGFGFGSPENADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDTSP 140

The following BLAST results are available for this feature:

BLAST of Lsi01G009770.1 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi01G009770.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIC0	1.1e-74	92.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490880 PE=4 SV=1	[more]
A0A5D3CRC3	2.7e-73	90.67	Membrane insertase YidC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1IVC7	9.4e-66	84.67	uncharacterized protein LOC111478729 OS=Cucurbita maxima OX=3661 GN=LOC111478729...	[more]
A0A6J1GDR3	1.2e-65	84.67	uncharacterized protein LOC111453248 OS=Cucurbita moschata OX=3662 GN=LOC1114532...	[more]
A0A6J1KLU9	3.4e-63	83.33	uncharacterized protein LOC111496895 OS=Cucurbita maxima OX=3661 GN=LOC111496895...	[more]

BLAST of Lsi01G009770.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141915.1	2.3e-74	92.67	uncharacterized protein LOC101216565 [Cucumis sativus] >KGN48524.1 hypothetical ...	[more]
TYK12889.1	5.6e-73	90.67	Membrane insertase YidC [Cucumis melo var. makuwa]	[more]
XP_038881139.1	6.2e-72	92.00	uncharacterized protein LOC120072737 [Benincasa hispida]	[more]
KAG7034341.1	6.7e-66	85.33	hypothetical protein SDJN02_04068, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023544597.1	1.1e-65	85.33	uncharacterized protein LOC111804129 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi01G009770.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33985.1	1.1e-37	57.53	Protein of unknown function (DUF1685)	[more]
AT2G15590.2	1.1e-29	48.65	Protein of unknown function (DUF1685)	[more]
AT3G50350.2	2.6e-28	50.35	Protein of unknown function (DUF1685)	[more]
AT2G15590.1	9.7e-23	54.37	Protein of unknown function (DUF1685)	[more]
AT3G50350.1	1.4e-21	53.51	Protein of unknown function (DUF1685)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 51..101 e-value: 4.8E-25 score: 87.1
None	No IPR available	PANTHER	PTHR31865	OSJNBA0071G03.3 PROTEIN	coord: 1..151
None	No IPR available	PANTHER	PTHR31865:SF1	INSERTASE, PUTATIVE (DUF1685)-RELATED	coord: 1..151

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi01G009770	Lsi01G009770	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G009770.1.exon.1	Lsi01G009770.1.exon.1	exon
Lsi01G009770.1.exon.2	Lsi01G009770.1.exon.2	exon
Lsi01G009770.1.exon.3	Lsi01G009770.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G009770.1.five_prime_UTR.1	Lsi01G009770.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G009770.1.CDS.1	Lsi01G009770.1.CDS.1	CDS
Lsi01G009770.1.CDS.2	Lsi01G009770.1.CDS.2	CDS
Lsi01G009770.1.CDS.3	Lsi01G009770.1.CDS.3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi01G009770.1	Lsi01G009770.1-protein	polypeptide