Lsi01G006210.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G006210.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	UPF0183 protein At3g51130
Location	chr01: 4988487 .. 4995259 (-)
Sequence length	1642
RNA-Seq Expression	Lsi01G006210.1
Synteny	Lsi01G006210.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTGAGGGTGAACTCTTTTTTTTTTTTTTTTTTTCAATTTACAATTCATTAATATCTTAATAAATTCAAAATAATAAAGTAAACATGAAACATCTAGGTAGAAAATAAAAAGAAAATAATTTTGAAACAAATAAGAAAATCTTTGAAATTTATAAAGTATTACCCACAATTCAAAATTCAAGTTGAATTTAAAAAAAATGATTGAAAAAGAACAAAAAAAATCAAAAACAACTGTTCACGACGTTAAAAAAATATTAATTCTAAATCTAGTTTTAAAATTTTAAACATAAATAAATTTGGTTAAAAATAAAAATAAAAATAAAAAAGAAAGATCGGTGTAAATAAGACAAAATGAAGAATTAAAAGATATATACACATACATTACGTATTCCAAAGCAGCAGTCTACAAACCAATTAAAATAGAATAAAAACTTACAAAGCACTTTTTTTTTTTTTTTGGAACTACCCATTTTCCCTAATTTGTTTTTAAAATTATATTTTTCTTCCAATTGAGAATAAATACCTTTTTCTTTCAATTAACCCCATTATTGAGAATAGTATGAATATTACTAATTTTTGTTAGCTGGGCCGAGGCCCAATGCTTCGTTTTGTTTGCAATACTAGACATGATTTATTGACATTGCTCGATGACTTGTATGGCATGCATTGGACCTATTATTGTTAGGTGTTTAGTCTTTTCATTTGGGCCTTTTTTTTTTTGACAAATTGATCCAAATAGTTTGGGCCGAATGAAATTTTGACTTTATTTTTTTAATAGACTTTTTTTTCTGAATATTTGCTTGGAGTCTGGGGGAAGATCATGCCACCTAACTAGCACCTAATAAGAATATATCACGTGATATTTTTTATAAAATTTTATTTGTATGTAAAGAAGAGGGAACATGAGATTGAGTGCAGCTAATTATTGTTTTTTTTTTTTTTTGTATTATAATCGAGAAAAAACAACCAAAATTTCATCTACTTTAGTGTTGAAAATTAATATACAAAAATACTATGATATGAGTGCGTGTTAGCAACGTAGAGGTACATATGGACACATGTAGTTTTAATATAAATTATACTCTCAAACATTGAGTAAAATAAAGACACTAATTACTATCACAAAGATTAATGGTTGAGTCCCCCTTCTAATAGTTATCATATTAATTGAAAATAAAAATAAAAAAAACTCTTTGGATATGTTTCAATTATACTCCTGCCATTTTAAAGAAGTAAACCCAAGACAATCGCTAAACCTAAGTTCTCTCTTGACCTCATCACAATCTTTTAACCTTATTAAGATTTAGCTTTTAATTTTAACTAATATATTATTTTTCACTCCATAGAAAAAAATTCAATACTACCTCTATATATTCTTCATCATAAAAAAAAAATTAAGAATAAAATGGAACCCAATAAATAAAATAATAACTCATCTAATGACGTGTCAAATGTTGAATGGAAAAGGTACATACTATTGTAATATTAAAAATGTTCACAACTTTCTATTTAAATGATACAAGTCTAACTGAAGCCAGTACCTCCAAATGCATATTTTCCTAATTTACATTTTTTAGTTAAAATTTAAAAGTATTTTTTAAAATAAAATTGAAAGTTGAGAAGTAAAAAAGAAAAACTTTAGTATAAAACGTATCCATTCTATGTCATTTAAGCTAAGTAAAACATGGAGATGAATTAAATTAAAATTTTGAAAAGATTAAAATAAAATTGAAAATTCGCTTAGAAACACAATTTTGAAGAGAATAAAATTAAGTTATATATATTATAATTAAAAAAAAAAAAAGATTTTATGTATGTAGGCTTCTAGGCATTGATTTCGGTTGCCTGTGTTTTGGAGTTAGCGTGGGAAGTGGGAAGACCAAGAAGCGAATTTCCGAACTGTGCAATACAAAACTTGGCATTAGAAATCTGAATTCTCACCACCTGTCTTCCTTCAATCGCGAAACCCACGGAACCGAAAAATCGAACCATCCAATTATCCAACCAAACCCCCAACGATGCAGAGATCCAGAAGACGCTGTGAGGGCACGGCTATGGGTGCCATCGTCCTCGATCTTCAACCCGGCCTTGGCCTCGGCCCCTTCAATCTCGGTTATTTCTCTAATTCCTCCATTTTTTTTTTATCTTATATGCTTCTGATTGCTGCTTCCCTATTGTTTTAGATGCTTAAGAATCATATTTCTCCAAACAGACCTTTCATACCAATGATTTCGATTCCGATATTCCTGATTCTCTTTCGCTTACGGCACAATTTTATTATGTTGGGAGGGATGAGGGATTTTTGGTGCTAAAAGATTAGGAACTTATGCGCCTCAGTTGTGTTGTTGTCCCAGGAATGCCAATTTGTGAAGCATTTGCACAAATAGAGCAGCGCCCTAACATCTATGACGTTGTCCATGTGAAATACTTCGACGAGGTATAGCTCTATACTGCAAATGCTGCTTGCCTATATTGGAATTAAATGCATAATCTGGATATCACTCTGCTGAAATCATTGATTTGTTGTCGGATATGCTTAATATGAAAATTTACTTCAATGCCTACTTATCTCTGATTTGCATTGTTGAATTTCACTAGTGGTTTATTTGGACGTATCTTCCACTGCCAATGTTCTAATGCTATGTATAACTCCTTATCATTGTAGGAGCCACTGAAACTCGATATCGTTATCAGCTTCCCAGACCATGGTTTTCATCTTCGCTTTGACCCGTGGTCACAGGTATTTTTGTTCTCTTGCATATTCATTGGAAATGAGATAATAAGGCTTTAGTGACCTTGCTTGAACAAGATCTATTCTATAGGTGGCATATTGTGCCTTTGAGTTCTAAAGAGATAACAAGGCTTTGACTCAAATCAAATGTGCACGCTCTAGAACCAGATGATTGTGAGAGAGTAGACATGACTTTCTTTTTAATTTTGATTGTTAAAATTCTTTGGCTTTATCATCATTTATCAGAGTTTCCTTCAAGTATTTTATGGGAAAGGGCTGCTGATGAGATCACATCTTCGAGCTGTCTGTTCATCTTATGTTTCAAGAGTTCATTTTGCTATAAATTAACTCATGCTTGTTTTTTTACTACTTGCTAGAGGCTACGTCTTATTGAAATATTTGATGTAAAGCGACTTCAAATGCGTTATGCTACTTCTCTGATTGGGTAGGTGATCTAACTCTCATGTAGGGGGCATACTAAATTTATTTTTCATAAATTAATGGTCATTACTTGATTGCAGAGGACCATCCAATCTTGCTACCTTTGTAGCTGTATATGCCCTTTTTGGGCCAACTTTTCCTGGAATTTATGACAAAGATAGGGGTGTTTACACCCTATTCTATCCAGTATGTATTTGTACTTCCAGGCAGACCTTTGCAAAGTAATATAATACTTTTTGCTTGACATTTATTTTTCATTTTTGATATCATCTATTTTCTGTTGTAGGGACTTTCATTTGCATTTCCAATACCAGGCCAATATACAGATTGTTGCCATGATGGAGAAGGTATTTTATCATAATTTCCTTTCTCTTAGTTTTTCTGTCTCTTGGATTTTAGAGTTCTAAGGAGAATAACTTGCTACTCTTAACTACCAAAGCGGAGCTACCTTTGGAGTTTCCTGATGGTACGACCCCAGTTGCTTGTCGAGTCTCCATATTTGATAGTTCTACAGTAAAAAAGGTTGGAGTAGGAGCCTTAATGGATAAGGCTTCTGCTCCCCCATTGCCTGCTAGCAGCCTTTATATGGAGGAGGTCCATGTTAAGGTCTGGCTTCCCTCTTCATCTGCACTTTCTGTTATTTGAATTGCATACCTGCTTACTTTTTTTTAATTGTGTCCAGCTTGGTGATGAATTATACTTTGCTGTGGGTAGTCAGCATATTCCTTTTGGTGCATCACCACAGGTAAGTTTGGGGCCCCTTGTCATGCTTATGTTGTTTAGTTATCTTTTTATCCTAAAATATTTAGCCGTATATCGGATTAATTAAATTAGTGACATGCAAAATTTGTTTGAGTATTTGTCCTTTTTCCCCCACAGAGCACAAAGCACATGAATTTATTTTGATTAATGAAAACCGCATTATGGACATTAACTACAAGACAGAATGAGTTAAAATGGATCTTACACCAATAAGTATTGGATATATATTGTACAACACCCTTGAGTTTTGGAGGCAAGTAACTTAAACTCATTCAGACTTCATCTCCAAATGTGCTTTTATGCCTTTAAACAAAAAGGGGATTCCTTTAAGGGGTTCTTCATGGCTGTAGAAGACATCTATCATGGATACAATCTTCTCCTTTCTGAGTTGTTACTTCTTTGACTTTTATAGTATTGTTGTGATTTTTCTTTAATTTTTCATATAATTCTATGTATCCTCCCTTATGAATTTCTAGTCATTTAACTCACCGAAAAAAAGAACGTGTCCGGTTAAAGGTTGTTTAAATTTATCTCTTACGCATTTCTGTTACTCTCTCCTCTCTCTCTCAAACGTGCACACTTTGTTTAATGATCTGCAGGATATTTGGACAGAATTAGGCCGCCCTTGTGGGATCCATCAAAAACAGGTATCCTTACATGCTACCTTGAACTATAAGTCGCGAGTTTCATAAACATTGCTATGATTATAATTGTTTAAAGATATATTAAATTAATTATGTTGAGCTGAGTTTGCTGTAGAATTTACATTTGAAGCCTTGACCTATTTTTTTTTTTGGGGGTGGTGGGGGGAAGGTTACAAGCAATCAGGCATCTTGGGCTTAATTATGCGACTAGTTAAATTTATGTGCATATATCAAAATTCAAGAGTGAAGACATGGATGCACATGCCATGCATAGATGCACGCTTTTGTTTCTGTATATTTCTTTCTTTGATATCCTAAAATCTTGGGAGTTTTGGTTTTTCTTGTTCAGGTAGATCAAATGGTTATTCATTCTGCTTCAGATCCCCGTCCCAGGACAACCCTTTGTGGTGATTACTTCTACAACTATTTTACCCGTGGTTTGGACATCTTATTTGATGGGCAGGTACTTGGATGGCTTTCTATTTATTAATGTAGCCTTTCTCGTGGTATATATTGATCTTTTGAGCTTTATAGTTCTAATTACCGTGTTTGATTTGCACTTGCAGACTCATAAAATCAAGAAGTTTGTTTTGCATACCAATTACCCTGGCCATGCTGATTTCAATTCATACATCAAGTGCAATTTTGTAATCCATGGTTCGGACCTACATGAAACATCACTCTCTACTTTTCTTTAGAATTATTTGTGCGAGAGTGACTGACCATTATAGTGCTGTTTCATGCAGTTTCAGGTTCTTTTGATGAAACGGACAGTAAAAACTCTATAACCCCTAGCACCAAGTGGGAAGATGTGAAGGTAGGATGGATTTTGCTCAAATTATTTTATCACGTCGGTTTCTTATATATGTTGTCAGGAGCTGGTTTAGACCTGTCTTGATTGAAGCCTATTTGATGGCACATATTTTTGTATTTATCAACATTTGATCATCTGTAATGGATTCATAACTCTGTAAAAATAGCTAATCATCATCAATTTTTTCCCAGATTGGAGTTCTTACACTCCTTTTCCGTGTTCAATTTTTTTTTTGGTGGTAAATATGGAATGTCTGACATTTTTTTTAATGAAACTAGGAAATCCTCGGGGATTGTGGGCGAGCTGCCATCCAAACACAAGGTTCAACAAACAATCCTTTTGGATCTACTTTCGTCTATGGCTATCAGAACGTTGCATTTGAGGTGGGTTTTTACACTTTTGTTTGTTTTTATTAGTGTTTTACTTTGCACCTTCCTATCTTGAAAACCATAAGTTGAGGTAAAGGAACAAATGATTTTGAGCACACAAACATTACGAATTGATTGTGTTATTAAAGGCAGTGTGCTAATGAGCATCAATGGCATGGGCAGGTGATGAAAAATGGTTACATCGCCACAGTTACCCTCTTCAAGTCATGATATATAGGCGCTTTGCTTCCCCTTGTCGGTTTGTTTCAAGCTAATTATATGGAGTTGGGGAAAGATGGCTTCTTGCTCTTGTTCAATTTGTAATGGCTGTTTAAAGAAAGTGAAGTGAGCTACTAATATGGTTTAGTTCTTGATCACTTCATTGCTGGCTTGGTTATGTGGGTTATATCTGTAGCCATCTTGTCTGTGTATATTCTCACCTTGTATAAAGCAGCAAATACTCAACTAGGCATTAATTATCATGTTGGACAGCATAACGATGTACATAACTATTGATTTGTAAATAATATGATACTGTTTTAATTACATTGTTCAGTGGATCTTGTCCCCCAGCATTGATTTTTGTAGTTCATGCCGAGGTTAAACGACAACTCTAGCGATCACTGTGGGCAGCTCGATGGAATACATGTGAGTTCTCTATAACTTATTTTAGACTGATGATGAGAAGTGTTTTAATTCAACTAAAAGTATTTTGCCAGAATTTCACAATGTTCGTTCGGACACATTACCAAAAGTAAATTTAAAATATAGAAATACAAAGTACTAACAGTGGTTATATATAAAAACAGGTGCCTTTGTTGAAAGCATCAATTCAAGTCGAGTCTGTTTTGGATAACTTATCATAGATAGAAAAGAAAAAGAAAGAACAATACAGTGGAACTTAGCTTTGCCTTAGGCTCAGGTACGAAACAAATTTTAAAACGGTAGAGATTTTACCATAGCATTTCAACCATATTTCCTAAACTAAAAACGTTTGAAAAATGTTCC

mRNA sequence

ATGAAGCTGGGCCGAGGCCCAATGCTTCGTTTTGTTTGCAATACTAGACATGATTTATTGACATTGCTCGATGACTTGCTTCTAGGCATTGATTTCGGTTGCCTGTGTTTTGGAGTTAGCGTGGGAAGTGGGAAGACCAAGAAGCGAATTTCCGAACTGTGCAATACAAAACTTGGCATTAGAAATCTGAATTCTCACCACCTGTCTTCCTTCAATCGCGAAACCCACGGAACCGAAAAATCGAACCATCCAATTATCCAACCAAACCCCCAACGATGCAGAGATCCAGAAGACGCTGTGAGGGCACGGCTATGGGTGCCATCGTCCTCGATCTTCAACCCGGCCTTGGCCTCGGCCCCTTCAATCTCGGAACTTATGCGCCTCAGTTGTGTTGTTGTCCCAGGAATGCCAATTTGTGAAGCATTTGCACAAATAGAGCAGCGCCCTAACATCTATGACGTTGTCCATGTGAAATACTTCGACGAGGAGCCACTGAAACTCGATATCGTTATCAGCTTCCCAGACCATGGTTTTCATCTTCGCTTTGACCCGTGGTCACAGAGGCTACGTCTTATTGAAATATTTGATGTAAAGCGACTTCAAATGCGTTATGCTACTTCTCTGATTGGGGACTTTCATTTGCATTTCCAATACCAGGCCAATATACAGATTGTTGCCATGATGGAGAAGAGTTCTAAGGAGAATAACTTGCTACTCTTAACTACCAAAGCGGAGCTACCTTTGGAGTTTCCTGATGGTACGACCCCAGTTGCTTGTCGAGTCTCCATATTTGATAGTTCTACAGTAAAAAAGGTTGGAGTAGGAGCCTTAATGGATAAGGCTTCTGCTCCCCCATTGCCTGCTAGCAGCCTTTATATGGAGGAGGTCCATGTTAAGCTTGGTGATGAATTATACTTTGCTGTGGGTAGTCAGCATATTCCTTTTGGTGCATCACCACAGGATATTTGGACAGAATTAGGCCGCCCTTGTGGGATCCATCAAAAACAGGTAGATCAAATGGTTATTCATTCTGCTTCAGATCCCCGTCCCAGGACAACCCTTTGTGGTGATTACTTCTACAACTATTTTACCCGTGGTTTGGACATCTTATTTGATGGGCAGACTCATAAAATCAAGAAGTTTGTTTTGCATACCAATTACCCTGGCCATGCTGATTTCAATTCATACATCAAGTGCAATTTTGTAATCCATGGTTCTTTTGATGAAACGGACAGTAAAAACTCTATAACCCCTAGCACCAAGTGGGAAGATGTGAAGGAAATCCTCGGGGATTGTGGGCGAGCTGCCATCCAAACACAAGGTTCAACAAACAATCCTTTTGGATCTACTTTCGTCTATGGCTATCAGAACGTTGCATTTGAGTTCATGCCGAGGTTAAACGACAACTCTAGCGATCACTGTGGGCAGCTCGATGGAATACATGTGCCTTTGTTGAAAGCATCAATTCAAGTCGAGTCTGTTTTGGATAACTTATCATAGATAGAAAAGAAAAAGAAAGAACAATACAGTGGAACTTAGCTTTGCCTTAGGCTCAGGTACGAAACAAATTTTAAAACGGTAGAGATTTTACCATAGCATTTCAACCATATTTCCTAAACTAAAAACGTTTGAAAAATGTTCC

Coding sequence (CDS)

ATGAAGCTGGGCCGAGGCCCAATGCTTCGTTTTGTTTGCAATACTAGACATGATTTATTGACATTGCTCGATGACTTGCTTCTAGGCATTGATTTCGGTTGCCTGTGTTTTGGAGTTAGCGTGGGAAGTGGGAAGACCAAGAAGCGAATTTCCGAACTGTGCAATACAAAACTTGGCATTAGAAATCTGAATTCTCACCACCTGTCTTCCTTCAATCGCGAAACCCACGGAACCGAAAAATCGAACCATCCAATTATCCAACCAAACCCCCAACGATGCAGAGATCCAGAAGACGCTGTGAGGGCACGGCTATGGGTGCCATCGTCCTCGATCTTCAACCCGGCCTTGGCCTCGGCCCCTTCAATCTCGGAACTTATGCGCCTCAGTTGTGTTGTTGTCCCAGGAATGCCAATTTGTGAAGCATTTGCACAAATAGAGCAGCGCCCTAACATCTATGACGTTGTCCATGTGAAATACTTCGACGAGGAGCCACTGAAACTCGATATCGTTATCAGCTTCCCAGACCATGGTTTTCATCTTCGCTTTGACCCGTGGTCACAGAGGCTACGTCTTATTGAAATATTTGATGTAAAGCGACTTCAAATGCGTTATGCTACTTCTCTGATTGGGGACTTTCATTTGCATTTCCAATACCAGGCCAATATACAGATTGTTGCCATGATGGAGAAGAGTTCTAAGGAGAATAACTTGCTACTCTTAACTACCAAAGCGGAGCTACCTTTGGAGTTTCCTGATGGTACGACCCCAGTTGCTTGTCGAGTCTCCATATTTGATAGTTCTACAGTAAAAAAGGTTGGAGTAGGAGCCTTAATGGATAAGGCTTCTGCTCCCCCATTGCCTGCTAGCAGCCTTTATATGGAGGAGGTCCATGTTAAGCTTGGTGATGAATTATACTTTGCTGTGGGTAGTCAGCATATTCCTTTTGGTGCATCACCACAGGATATTTGGACAGAATTAGGCCGCCCTTGTGGGATCCATCAAAAACAGGTAGATCAAATGGTTATTCATTCTGCTTCAGATCCCCGTCCCAGGACAACCCTTTGTGGTGATTACTTCTACAACTATTTTACCCGTGGTTTGGACATCTTATTTGATGGGCAGACTCATAAAATCAAGAAGTTTGTTTTGCATACCAATTACCCTGGCCATGCTGATTTCAATTCATACATCAAGTGCAATTTTGTAATCCATGGTTCTTTTGATGAAACGGACAGTAAAAACTCTATAACCCCTAGCACCAAGTGGGAAGATGTGAAGGAAATCCTCGGGGATTGTGGGCGAGCTGCCATCCAAACACAAGGTTCAACAAACAATCCTTTTGGATCTACTTTCGTCTATGGCTATCAGAACGTTGCATTTGAGTTCATGCCGAGGTTAAACGACAACTCTAGCGATCACTGTGGGCAGCTCGATGGAATACATGTGCCTTTGTTGAAAGCATCAATTCAAGTCGAGTCTGTTTTGGATAACTTATCATAG

Protein sequence

MKLGRGPMLRFVCNTRHDLLTLLDDLLLGIDFGCLCFGVSVGSGKTKKRISELCNTKLGIRNLNSHHLSSFNRETHGTEKSNHPIIQPNPQRCRDPEDAVRARLWVPSSSIFNPALASAPSISELMRLSCVVVPGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKSSKENNLLLLTTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHGSFDETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFMPRLNDNSSDHCGQLDGIHVPLLKASIQVESVLDNLS

Homology

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BLAST of Lsi01G006210.1 vs. ExPASy Swiss-Prot
Match: Q9SD33 (PHAF1 protein At3g51130 OS=Arabidopsis thaliana OX=3702 GN=At3g51130 PE=1 SV=2)

HSP 1 Score: 522.3 bits (1344), Expect = 5.9e-147
Identity = 255/354 (72.03%), Postives = 280/354 (79.10%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQ+PNIYDVVHVKY+DE+PLKLD+VISFPDHGFHLRFDPWSQRLRL+EI
Sbjct: 44  GMPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEI 103

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS--SKENNLLLL------------ 254
           FDVKRLQMRYATS+IG       + A   +          KE  +  L            
Sbjct: 104 FDVKRLQMRYATSMIGGPSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIP 163

Query: 255 --------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLY 314
                     +A LPLEFPDGTTPV CRVSI+D+S+ KKVGVG LMD+AS PPLP  SLY
Sbjct: 164 NQYTDCCHDGEAALPLEFPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLY 223

Query: 315 MEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRT 374
           MEEVHVK G ELYF VG QH+PFGASPQD+WTELGRPCGIH KQVDQMVIHSASDPRP+T
Sbjct: 224 MEEVHVKPGKELYFTVGGQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKT 283

Query: 375 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHGSFDETD- 434
           T+CGDYFYNYFTRGLDILFDG+THK+KKFVLHTNYPGHADFNSYIKCNFVI    D  + 
Sbjct: 284 TICGDYFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISAGADAAEA 343

Query: 435 --SKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
             S N ITPST W+ VKEILG+CG AAIQTQGST+NPFGST+VYGYQNVAFE M
Sbjct: 344 NRSGNKITPSTNWDQVKEILGECGPAAIQTQGSTSNPFGSTYVYGYQNVAFEVM 397

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BLAST of Lsi01G006210.1 vs. ExPASy Swiss-Prot
Match: Q9BSU1 (Phagosome assembly factor 1 OS=Homo sapiens OX=9606 GN=PHAF1 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.7e-43
Identity = 120/383 (31.33%), Postives = 189/383 (49.35%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMP+ +A A +++   I   V V Y ++ PL  D++++    G  L FD ++QRL++IE+
Sbjct: 22  GMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLMFDAFNQRLKVIEV 81

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS----------SKENNLLL----- 254
            D+ +++++Y         +HF  QA    +  +++S          S E    L     
Sbjct: 82  CDLTKVKLKYC-------GVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGL 141

Query: 255 -----LTTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGV--GALMDKASAPPLPAS--- 314
                L +  E P   P+    +A  + I   +TVK++ +  G  +    AP +P S   
Sbjct: 142 SFSFQLDSWTEAPKYEPNFAHGLA-SLQIPHGATVKRMYIYSGNSLQDTKAPMMPLSCFL 201

Query: 315 -SLYMEEVHV---------------------KLGDELYFAVGSQHIPFGASPQDIWTELG 374
            ++Y E V V                      L  +    V  + + FG S QD+ + LG
Sbjct: 202 GNVYAESVDVLRDGTGPAGLRLRLLAAGCGPGLLADAKMRVFERSVYFGDSCQDVLSMLG 261

Query: 375 RPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNY 434
            P  +  K  D+M IHS S  +   + C DYF+NYFT G+DILFD  THK+KKFVLHTNY
Sbjct: 262 SPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNY 321

Query: 435 PGHADFNSYIKCNFVIHGSFDETDS---KNSITPSTKWEDVKEILGDCGRAAIQTQGSTN 464
           PGH +FN Y +C F I  +  + ++     + T  +KW++++E+LG      +    S++
Sbjct: 322 PGHYNFNIYHRCEFKIPLAIKKENADGQTETCTTYSKWDNIQELLGHPVEKPVVLHRSSS 381

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BLAST of Lsi01G006210.1 vs. ExPASy Swiss-Prot
Match: O08654 (Phagosome assembly factor 1 OS=Rattus norvegicus OX=10116 GN=Phaf1 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.0e-42
Identity = 119/383 (31.07%), Postives = 188/383 (49.09%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMP+ +A A +++   I   V V Y ++ PL  D++++    G  L FD ++QRL++IE+
Sbjct: 22  GMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLLFDAFNQRLKVIEV 81

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS----------SKENNLLL----- 254
           +D+ +++++Y         +HF  QA    +  +++S          S E    L     
Sbjct: 82  YDLTKVKLKYC-------GVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGL 141

Query: 255 -----LTTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGV--GALMDKASAPPLPAS--- 314
                L +  E P   P+    +A  + I   +TVK++ +  G  +    AP +P S   
Sbjct: 142 SFSFQLDSWTEAPKYEPNFAHGLA-SLQIPHGATVKRMYIYSGNSLQDTKAPMMPLSCFL 201

Query: 315 -SLYMEEVHV---------------------KLGDELYFAVGSQHIPFGASPQDIWTELG 374
            ++Y E V V                      +  +    V  + + FG S QD+ + LG
Sbjct: 202 GNVYAESVDVIRDGTGPSGLRLRLLAAGCGPGVLADAKMRVFERAVYFGDSCQDVLSMLG 261

Query: 375 RPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNY 434
            P  +  K  D+M IHS S  +   + C DYF+NYFT G+DILFD  THK+KKFVLHTNY
Sbjct: 262 SPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNY 321

Query: 435 PGHADFNSYIKCNFVIHGSFDETDSKNS---ITPSTKWEDVKEILGDCGRAAIQTQGSTN 464
           PGH +FN Y +C F I  +  + ++       T  +KW+ ++E+LG      +    S++
Sbjct: 322 PGHYNFNIYHRCEFKIPLAIKKENAGGQTEICTTYSKWDSIQELLGHPVEKPVVLHRSSS 381

[Close]

BLAST of Lsi01G006210.1 vs. ExPASy Swiss-Prot
Match: Q9VSH9 (PHAF1 protein CG7083 OS=Drosophila melanogaster OX=7227 GN=CG7083 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.4e-42
Identity = 130/400 (32.50%), Postives = 183/400 (45.75%), Query Frame = 0


Query: 133 VPGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLI 192
           V GM   +A A I+ +  I   V V Y D  PL +DI+I+ P  G  L FDP SQRL+ I
Sbjct: 20  VLGMHFSQAIAIIQSQVGIIKGVQVLYSDTTPLGVDIIINLPQDGVRLIFDPVSQRLKTI 79

Query: 193 EIFDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKSSKENNLLLLTTKAEL------ 252
           E+F++K +++RY       F ++F     +  +  +E S    +  +     +L      
Sbjct: 80  EVFNMKLVKLRY-------FGVYFNSPEVLPSIEQIEHSFGATHPGVYDAAKQLFALHFR 139

Query: 253 ---------------------PLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPP 312
                                 L F +G +PV  ++S++  S V +  V         P 
Sbjct: 140 GLSFYFPVDSKLHSGYAHGLSSLVFLNGASPVVSKMSLYAGSNVLENRV---------PS 199

Query: 313 LPAS----SLYMEEV--------HVKLGDELYFAVGS------------QHIPFGASPQD 372
           LP S     +Y+E          H K      F  GS            + + FG S +D
Sbjct: 200 LPLSCYHRQMYLESATVLRTAFGHTKGLKLKLFTEGSGRALEPRRQCFTRELLFGDSCED 259

Query: 373 IWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKF 432
           + T LG P  I  K  D+M IHS+S  R   +   D F+NYFT G+D+LFD +T   KKF
Sbjct: 260 VATSLGAPNRIFFKSEDKMKIHSSSVNRQAQSKRSDIFFNYFTLGIDVLFDARTQTCKKF 319

Query: 433 VLHTNYPGHADFNSYIKCNFVI-----HGSFDE------TDSKN---SITPSTKWEDVKE 465
           +LHTNYPGH +FN Y +C F       H S  +      T +K    +IT  TKW+ +  
Sbjct: 320 ILHTNYPGHFNFNMYHRCEFQFLLQADHPSMSDSGHDLVTPTKQEHVNITAYTKWDAISS 379

[Close]

BLAST of Lsi01G006210.1 vs. ExPASy Swiss-Prot
Match: Q922R1 (Phagosome assembly factor 1 OS=Mus musculus OX=10090 GN=Phaf1 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 1.2e-41
Identity = 120/384 (31.25%), Postives = 188/384 (48.96%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMP+ +A A +++   I   V V Y ++ PL  D++++    G  L FD ++QRL++IE+
Sbjct: 22  GMPLAQAVAILQKHCRIIRNVQVLYSEQSPLSHDLILNLTQDGITLLFDAFNQRLKVIEV 81

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS----------SKENNLLL----- 254
            ++ +++++Y         +HF  QA    +  +++S          S E    L     
Sbjct: 82  CELTKVKLKYC-------GVHFNSQAIAPTIEQIDQSFGATHPGVYNSTEQLFHLNFRGL 141

Query: 255 -----LTTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGV--GALMDKASAPPLPAS--- 314
                L +  E P   P+    +A  + I   +TVK++ +  G  +    AP +P S   
Sbjct: 142 SFSFQLDSWTEAPKYEPNFAHGLA-SLQIPHGATVKRMYIYSGNSLQDTKAPVMPLSCFL 201

Query: 315 -SLYMEEVHVKLGD----------------------ELYFAVGSQHIPFGASPQDIWTEL 374
            ++Y E V V L D                      +    V  + + FG S QD+ + L
Sbjct: 202 GNVYAESVDV-LRDGTGPSGLRLRLLAAGCGPGVLADAKMRVFERAVYFGDSCQDVLSML 261

Query: 375 GRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTN 434
           G P  +  K  D+M IHS S  +   + C DYF+NYFT G+DILFD  THK+KKFVLHTN
Sbjct: 262 GSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTN 321

Query: 435 YPGHADFNSYIKCNFVIHGSFDETDSKNS---ITPSTKWEDVKEILGDCGRAAIQTQGST 464
           YPGH +FN Y +C F I  +  + ++       T  +KW+ ++E+LG      +    S+
Sbjct: 322 YPGHYNFNIYHRCEFKIPLAIKKENAGGQTEICTTYSKWDSIQELLGHPVEKPVVLHRSS 381

[Close]

BLAST of Lsi01G006210.1 vs. ExPASy TrEMBL
Match: A0A0A0KH65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505220 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 1.5e-164
Identity = 294/356 (82.58%), Postives = 304/356 (85.39%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVG+GALMDKASAPPLPAS
Sbjct: 153 PIPSQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPPLPAS 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DET+ KN+ITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DETNCKNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210.1 vs. ExPASy TrEMBL
Match: A0A5D3CN38 (UPF0183 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001500 PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 4.3e-164
Identity = 293/356 (82.30%), Postives = 303/356 (85.11%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVG+GALMDKASAPPLPA 
Sbjct: 153 PIPNQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPPLPAG 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DET+ KN+ITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DETNCKNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210.1 vs. ExPASy TrEMBL
Match: A0A1S3B1H9 (UPF0183 protein At3g51130 OS=Cucumis melo OX=3656 GN=LOC103485106 PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 4.3e-164
Identity = 293/356 (82.30%), Postives = 303/356 (85.11%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVG+GALMDKASAPPLPA 
Sbjct: 153 PIPNQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPPLPAG 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DET+ KN+ITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DETNCKNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210.1 vs. ExPASy TrEMBL
Match: A0A6J1KNX2 (UPF0183 protein At3g51130 OS=Cucurbita maxima OX=3661 GN=LOC111497351 PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 1.2e-163
Identity = 292/353 (82.72%), Postives = 299/353 (84.70%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 32  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 91

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKSSKENNLLLLTT------------ 254
           FDVKRLQMRYATSLIG       + A   +         + +  + T             
Sbjct: 92  FDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIP 151

Query: 255 ----------KAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLY 314
                     +AELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPA SLY
Sbjct: 152 SQYSDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAGSLY 211

Query: 315 MEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRT 374
           MEEVHVKLGDELYFAVG QHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSA DPRPRT
Sbjct: 212 MEEVHVKLGDELYFAVGGQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSALDPRPRT 271

Query: 375 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSFDET 434
           TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSFDET
Sbjct: 272 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSFDET 331

Query: 435 DSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           + KNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 332 NCKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 384

[Close]

BLAST of Lsi01G006210.1 vs. ExPASy TrEMBL
Match: A0A6J1HFL0 (UPF0183 protein At3g51130 OS=Cucurbita moschata OX=3662 GN=LOC111463505 PE=3 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 3.6e-163
Identity = 291/353 (82.44%), Postives = 300/353 (84.99%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 32  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 91

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKSSKENNLLLLTT------------ 254
           FDVKRLQMRYATSLIG       + A   +         + +  + T             
Sbjct: 92  FDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIP 151

Query: 255 ----------KAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLY 314
                     +AELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPA+SLY
Sbjct: 152 SQYSDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAASLY 211

Query: 315 MEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRT 374
           MEEVHVKLGDELYFAVG QHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSA DPRPRT
Sbjct: 212 MEEVHVKLGDELYFAVGGQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSALDPRPRT 271

Query: 375 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSFDET 434
           TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF+ET
Sbjct: 272 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSFNET 331

Query: 435 DSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           + KNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 332 NCKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 384

[Close]

BLAST of Lsi01G006210.1 vs. NCBI nr
Match: XP_038882858.1 (UPF0183 protein At3g51130 isoform X1 [Benincasa hispida])

HSP 1 Score: 589.7 bits (1519), Expect = 2.3e-164
Identity = 295/356 (82.87%), Postives = 304/356 (85.39%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPA+
Sbjct: 153 PIPSQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAN 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DE +SKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DEANSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210.1 vs. NCBI nr
Match: XP_004134877.1 (UPF0183 protein At3g51130 [Cucumis sativus] >KGN48893.1 hypothetical protein Csa_004105 [Cucumis sativus])

HSP 1 Score: 589.3 bits (1518), Expect = 3.0e-164
Identity = 294/356 (82.58%), Postives = 304/356 (85.39%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVG+GALMDKASAPPLPAS
Sbjct: 153 PIPSQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPPLPAS 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DET+ KN+ITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DETNCKNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210.1 vs. NCBI nr
Match: XP_008440791.1 (PREDICTED: UPF0183 protein At3g51130 [Cucumis melo] >KAA0025693.1 UPF0183 protein [Cucumis melo var. makuwa] >TYK12568.1 UPF0183 protein [Cucumis melo var. makuwa])

HSP 1 Score: 587.8 bits (1514), Expect = 8.8e-164
Identity = 293/356 (82.30%), Postives = 303/356 (85.11%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVG+GALMDKASAPPLPA 
Sbjct: 153 PIPNQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPPLPAG 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DET+ KN+ITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DETNCKNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210.1 vs. NCBI nr
Match: XP_038882859.1 (UPF0183 protein At3g51130 isoform X2 [Benincasa hispida])

HSP 1 Score: 587.8 bits (1514), Expect = 8.8e-164
Identity = 294/354 (83.05%), Postives = 303/354 (85.59%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPA+
Sbjct: 153 PIPSQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAN 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE 462
           DE +SKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE
Sbjct: 333 DEANSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE 383

[Close]

BLAST of Lsi01G006210.1 vs. NCBI nr
Match: XP_023003902.1 (UPF0183 protein At3g51130 [Cucurbita maxima])

HSP 1 Score: 586.3 bits (1510), Expect = 2.6e-163
Identity = 292/353 (82.72%), Postives = 299/353 (84.70%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 32  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 91

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKSSKENNLLLLTT------------ 254
           FDVKRLQMRYATSLIG       + A   +         + +  + T             
Sbjct: 92  FDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIP 151

Query: 255 ----------KAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLY 314
                     +AELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPA SLY
Sbjct: 152 SQYSDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAGSLY 211

Query: 315 MEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRT 374
           MEEVHVKLGDELYFAVG QHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSA DPRPRT
Sbjct: 212 MEEVHVKLGDELYFAVGGQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSALDPRPRT 271

Query: 375 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSFDET 434
           TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSFDET
Sbjct: 272 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSFDET 331

Query: 435 DSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           + KNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 332 NCKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 384

[Close]

BLAST of Lsi01G006210.1 vs. TAIR 10
Match: AT3G51130.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). )

HSP 1 Score: 522.3 bits (1344), Expect = 4.2e-148
Identity = 255/354 (72.03%), Postives = 280/354 (79.10%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQ+PNIYDVVHVKY+DE+PLKLD+VISFPDHGFHLRFDPWSQRLRL+EI
Sbjct: 44  GMPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEI 103

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS--SKENNLLLL------------ 254
           FDVKRLQMRYATS+IG       + A   +          KE  +  L            
Sbjct: 104 FDVKRLQMRYATSMIGGPSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIP 163

Query: 255 --------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLY 314
                     +A LPLEFPDGTTPV CRVSI+D+S+ KKVGVG LMD+AS PPLP  SLY
Sbjct: 164 NQYTDCCHDGEAALPLEFPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLY 223

Query: 315 MEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRT 374
           MEEVHVK G ELYF VG QH+PFGASPQD+WTELGRPCGIH KQVDQMVIHSASDPRP+T
Sbjct: 224 MEEVHVKPGKELYFTVGGQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKT 283

Query: 375 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHGSFDETD- 434
           T+CGDYFYNYFTRGLDILFDG+THK+KKFVLHTNYPGHADFNSYIKCNFVI    D  + 
Sbjct: 284 TICGDYFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISAGADAAEA 343

Query: 435 --SKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
             S N ITPST W+ VKEILG+CG AAIQTQGST+NPFGST+VYGYQNVAFE M
Sbjct: 344 NRSGNKITPSTNWDQVKEILGECGPAAIQTQGSTSNPFGSTYVYGYQNVAFEVM 397

The following BLAST results are available for this feature:

BLAST of Lsi01G006210.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD33	5.9e-147	72.03	PHAF1 protein At3g51130 OS=Arabidopsis thaliana OX=3702 GN=At3g51130 PE=1 SV=2	[more]
Q9BSU1	4.7e-43	31.33	Phagosome assembly factor 1 OS=Homo sapiens OX=9606 GN=PHAF1 PE=1 SV=1	[more]
O08654	1.0e-42	31.07	Phagosome assembly factor 1 OS=Rattus norvegicus OX=10116 GN=Phaf1 PE=2 SV=1	[more]
Q9VSH9	1.4e-42	32.50	PHAF1 protein CG7083 OS=Drosophila melanogaster OX=7227 GN=CG7083 PE=2 SV=1	[more]
Q922R1	1.2e-41	31.25	Phagosome assembly factor 1 OS=Mus musculus OX=10090 GN=Phaf1 PE=1 SV=2	[more]

BLAST of Lsi01G006210.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH65	1.5e-164	82.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505220 PE=3 SV=1	[more]
A0A5D3CN38	4.3e-164	82.30	UPF0183 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0015...	[more]
A0A1S3B1H9	4.3e-164	82.30	UPF0183 protein At3g51130 OS=Cucumis melo OX=3656 GN=LOC103485106 PE=3 SV=1	[more]
A0A6J1KNX2	1.2e-163	82.72	UPF0183 protein At3g51130 OS=Cucurbita maxima OX=3661 GN=LOC111497351 PE=3 SV=1	[more]
A0A6J1HFL0	3.6e-163	82.44	UPF0183 protein At3g51130 OS=Cucurbita moschata OX=3662 GN=LOC111463505 PE=3 SV=...	[more]

BLAST of Lsi01G006210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882858.1	2.3e-164	82.87	UPF0183 protein At3g51130 isoform X1 [Benincasa hispida]	[more]
XP_004134877.1	3.0e-164	82.58	UPF0183 protein At3g51130 [Cucumis sativus] >KGN48893.1 hypothetical protein Csa...	[more]
XP_008440791.1	8.8e-164	82.30	PREDICTED: UPF0183 protein At3g51130 [Cucumis melo] >KAA0025693.1 UPF0183 protei...	[more]
XP_038882859.1	8.8e-164	83.05	UPF0183 protein At3g51130 isoform X2 [Benincasa hispida]	[more]
XP_023003902.1	2.6e-163	82.72	UPF0183 protein At3g51130 [Cucurbita maxima]	[more]

BLAST of Lsi01G006210.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51130.1	4.2e-148	72.03	unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005373	Phagosome assembly factor 1	PFAM	PF03676	UPF0183	coord: 241..464 e-value: 1.5E-76 score: 258.3 coord: 135..219 e-value: 8.9E-26 score: 91.1
IPR005373	Phagosome assembly factor 1	PANTHER	PTHR13465:SF2	UPF0183 PROTEIN C16ORF70	coord: 240..463
IPR005373	Phagosome assembly factor 1	PANTHER	PTHR13465:SF2	UPF0183 PROTEIN C16ORF70	coord: 135..210
IPR039156	PHAF1/Protein broad-minded	PANTHER	PTHR13465	UPF0183 PROTEIN	coord: 240..463
IPR039156	PHAF1/Protein broad-minded	PANTHER	PTHR13465	UPF0183 PROTEIN	coord: 135..210

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi01G006210	Lsi01G006210	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G006210.1.exon.1	Lsi01G006210.1.exon.1	exon
Lsi01G006210.1.exon.2	Lsi01G006210.1.exon.2	exon
Lsi01G006210.1.exon.3	Lsi01G006210.1.exon.3	exon
Lsi01G006210.1.exon.4	Lsi01G006210.1.exon.4	exon
Lsi01G006210.1.exon.5	Lsi01G006210.1.exon.5	exon
Lsi01G006210.1.exon.6	Lsi01G006210.1.exon.6	exon
Lsi01G006210.1.exon.7	Lsi01G006210.1.exon.7	exon
Lsi01G006210.1.exon.8	Lsi01G006210.1.exon.8	exon
Lsi01G006210.1.exon.9	Lsi01G006210.1.exon.9	exon
Lsi01G006210.1.exon.10	Lsi01G006210.1.exon.10	exon
Lsi01G006210.1.exon.11	Lsi01G006210.1.exon.11	exon
Lsi01G006210.1.exon.12	Lsi01G006210.1.exon.12	exon
Lsi01G006210.1.exon.13	Lsi01G006210.1.exon.13	exon
Lsi01G006210.1.exon.14	Lsi01G006210.1.exon.14	exon
Lsi01G006210.1.exon.15	Lsi01G006210.1.exon.15	exon
Lsi01G006210.1.exon.16	Lsi01G006210.1.exon.16	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G006210.1.three_prime_UTR.1	Lsi01G006210.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G006210.1.CDS.16	Lsi01G006210.1.CDS.16	CDS
Lsi01G006210.1.CDS.15	Lsi01G006210.1.CDS.15	CDS
Lsi01G006210.1.CDS.14	Lsi01G006210.1.CDS.14	CDS
Lsi01G006210.1.CDS.13	Lsi01G006210.1.CDS.13	CDS
Lsi01G006210.1.CDS.12	Lsi01G006210.1.CDS.12	CDS
Lsi01G006210.1.CDS.11	Lsi01G006210.1.CDS.11	CDS
Lsi01G006210.1.CDS.10	Lsi01G006210.1.CDS.10	CDS
Lsi01G006210.1.CDS.9	Lsi01G006210.1.CDS.9	CDS
Lsi01G006210.1.CDS.8	Lsi01G006210.1.CDS.8	CDS
Lsi01G006210.1.CDS.7	Lsi01G006210.1.CDS.7	CDS
Lsi01G006210.1.CDS.6	Lsi01G006210.1.CDS.6	CDS
Lsi01G006210.1.CDS.5	Lsi01G006210.1.CDS.5	CDS
Lsi01G006210.1.CDS.4	Lsi01G006210.1.CDS.4	CDS
Lsi01G006210.1.CDS.3	Lsi01G006210.1.CDS.3	CDS
Lsi01G006210.1.CDS.2	Lsi01G006210.1.CDS.2	CDS
Lsi01G006210.1.CDS.1	Lsi01G006210.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi01G006210.1	Lsi01G006210.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane