Lsi01G006210 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G006210
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	UPF0183 protein At3g51130
Location	chr01: 4988487 .. 4995259 (-)
RNA-Seq Expression	Lsi01G006210
Synteny	Lsi01G006210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTGAGGGTGAACTCTTTTTTTTTTTTTTTTTTTCAATTTACAATTCATTAATATCTTAATAAATTCAAAATAATAAAGTAAACATGAAACATCTAGGTAGAAAATAAAAAGAAAATAATTTTGAAACAAATAAGAAAATCTTTGAAATTTATAAAGTATTACCCACAATTCAAAATTCAAGTTGAATTTAAAAAAAATGATTGAAAAAGAACAAAAAAAATCAAAAACAACTGTTCACGACGTTAAAAAAATATTAATTCTAAATCTAGTTTTAAAATTTTAAACATAAATAAATTTGGTTAAAAATAAAAATAAAAATAAAAAAGAAAGATCGGTGTAAATAAGACAAAATGAAGAATTAAAAGATATATACACATACATTACGTATTCCAAAGCAGCAGTCTACAAACCAATTAAAATAGAATAAAAACTTACAAAGCACTTTTTTTTTTTTTTTGGAACTACCCATTTTCCCTAATTTGTTTTTAAAATTATATTTTTCTTCCAATTGAGAATAAATACCTTTTTCTTTCAATTAACCCCATTATTGAGAATAGTATGAATATTACTAATTTTTGTTAGCTGGGCCGAGGCCCAATGCTTCGTTTTGTTTGCAATACTAGACATGATTTATTGACATTGCTCGATGACTTGTATGGCATGCATTGGACCTATTATTGTTAGGTGTTTAGTCTTTTCATTTGGGCCTTTTTTTTTTTGACAAATTGATCCAAATAGTTTGGGCCGAATGAAATTTTGACTTTATTTTTTTAATAGACTTTTTTTTCTGAATATTTGCTTGGAGTCTGGGGGAAGATCATGCCACCTAACTAGCACCTAATAAGAATATATCACGTGATATTTTTTATAAAATTTTATTTGTATGTAAAGAAGAGGGAACATGAGATTGAGTGCAGCTAATTATTGTTTTTTTTTTTTTTTGTATTATAATCGAGAAAAAACAACCAAAATTTCATCTACTTTAGTGTTGAAAATTAATATACAAAAATACTATGATATGAGTGCGTGTTAGCAACGTAGAGGTACATATGGACACATGTAGTTTTAATATAAATTATACTCTCAAACATTGAGTAAAATAAAGACACTAATTACTATCACAAAGATTAATGGTTGAGTCCCCCTTCTAATAGTTATCATATTAATTGAAAATAAAAATAAAAAAAACTCTTTGGATATGTTTCAATTATACTCCTGCCATTTTAAAGAAGTAAACCCAAGACAATCGCTAAACCTAAGTTCTCTCTTGACCTCATCACAATCTTTTAACCTTATTAAGATTTAGCTTTTAATTTTAACTAATATATTATTTTTCACTCCATAGAAAAAAATTCAATACTACCTCTATATATTCTTCATCATAAAAAAAAAATTAAGAATAAAATGGAACCCAATAAATAAAATAATAACTCATCTAATGACGTGTCAAATGTTGAATGGAAAAGGTACATACTATTGTAATATTAAAAATGTTCACAACTTTCTATTTAAATGATACAAGTCTAACTGAAGCCAGTACCTCCAAATGCATATTTTCCTAATTTACATTTTTTAGTTAAAATTTAAAAGTATTTTTTAAAATAAAATTGAAAGTTGAGAAGTAAAAAAGAAAAACTTTAGTATAAAACGTATCCATTCTATGTCATTTAAGCTAAGTAAAACATGGAGATGAATTAAATTAAAATTTTGAAAAGATTAAAATAAAATTGAAAATTCGCTTAGAAACACAATTTTGAAGAGAATAAAATTAAGTTATATATATTATAATTAAAAAAAAAAAAAGATTTTATGTATGTAGGCTTCTAGGCATTGATTTCGGTTGCCTGTGTTTTGGAGTTAGCGTGGGAAGTGGGAAGACCAAGAAGCGAATTTCCGAACTGTGCAATACAAAACTTGGCATTAGAAATCTGAATTCTCACCACCTGTCTTCCTTCAATCGCGAAACCCACGGAACCGAAAAATCGAACCATCCAATTATCCAACCAAACCCCCAACGATGCAGAGATCCAGAAGACGCTGTGAGGGCACGGCTATGGGTGCCATCGTCCTCGATCTTCAACCCGGCCTTGGCCTCGGCCCCTTCAATCTCGGTTATTTCTCTAATTCCTCCATTTTTTTTTTATCTTATATGCTTCTGATTGCTGCTTCCCTATTGTTTTAGATGCTTAAGAATCATATTTCTCCAAACAGACCTTTCATACCAATGATTTCGATTCCGATATTCCTGATTCTCTTTCGCTTACGGCACAATTTTATTATGTTGGGAGGGATGAGGGATTTTTGGTGCTAAAAGATTAGGAACTTATGCGCCTCAGTTGTGTTGTTGTCCCAGGAATGCCAATTTGTGAAGCATTTGCACAAATAGAGCAGCGCCCTAACATCTATGACGTTGTCCATGTGAAATACTTCGACGAGGTATAGCTCTATACTGCAAATGCTGCTTGCCTATATTGGAATTAAATGCATAATCTGGATATCACTCTGCTGAAATCATTGATTTGTTGTCGGATATGCTTAATATGAAAATTTACTTCAATGCCTACTTATCTCTGATTTGCATTGTTGAATTTCACTAGTGGTTTATTTGGACGTATCTTCCACTGCCAATGTTCTAATGCTATGTATAACTCCTTATCATTGTAGGAGCCACTGAAACTCGATATCGTTATCAGCTTCCCAGACCATGGTTTTCATCTTCGCTTTGACCCGTGGTCACAGGTATTTTTGTTCTCTTGCATATTCATTGGAAATGAGATAATAAGGCTTTAGTGACCTTGCTTGAACAAGATCTATTCTATAGGTGGCATATTGTGCCTTTGAGTTCTAAAGAGATAACAAGGCTTTGACTCAAATCAAATGTGCACGCTCTAGAACCAGATGATTGTGAGAGAGTAGACATGACTTTCTTTTTAATTTTGATTGTTAAAATTCTTTGGCTTTATCATCATTTATCAGAGTTTCCTTCAAGTATTTTATGGGAAAGGGCTGCTGATGAGATCACATCTTCGAGCTGTCTGTTCATCTTATGTTTCAAGAGTTCATTTTGCTATAAATTAACTCATGCTTGTTTTTTTACTACTTGCTAGAGGCTACGTCTTATTGAAATATTTGATGTAAAGCGACTTCAAATGCGTTATGCTACTTCTCTGATTGGGTAGGTGATCTAACTCTCATGTAGGGGGCATACTAAATTTATTTTTCATAAATTAATGGTCATTACTTGATTGCAGAGGACCATCCAATCTTGCTACCTTTGTAGCTGTATATGCCCTTTTTGGGCCAACTTTTCCTGGAATTTATGACAAAGATAGGGGTGTTTACACCCTATTCTATCCAGTATGTATTTGTACTTCCAGGCAGACCTTTGCAAAGTAATATAATACTTTTTGCTTGACATTTATTTTTCATTTTTGATATCATCTATTTTCTGTTGTAGGGACTTTCATTTGCATTTCCAATACCAGGCCAATATACAGATTGTTGCCATGATGGAGAAGGTATTTTATCATAATTTCCTTTCTCTTAGTTTTTCTGTCTCTTGGATTTTAGAGTTCTAAGGAGAATAACTTGCTACTCTTAACTACCAAAGCGGAGCTACCTTTGGAGTTTCCTGATGGTACGACCCCAGTTGCTTGTCGAGTCTCCATATTTGATAGTTCTACAGTAAAAAAGGTTGGAGTAGGAGCCTTAATGGATAAGGCTTCTGCTCCCCCATTGCCTGCTAGCAGCCTTTATATGGAGGAGGTCCATGTTAAGGTCTGGCTTCCCTCTTCATCTGCACTTTCTGTTATTTGAATTGCATACCTGCTTACTTTTTTTTAATTGTGTCCAGCTTGGTGATGAATTATACTTTGCTGTGGGTAGTCAGCATATTCCTTTTGGTGCATCACCACAGGTAAGTTTGGGGCCCCTTGTCATGCTTATGTTGTTTAGTTATCTTTTTATCCTAAAATATTTAGCCGTATATCGGATTAATTAAATTAGTGACATGCAAAATTTGTTTGAGTATTTGTCCTTTTTCCCCCACAGAGCACAAAGCACATGAATTTATTTTGATTAATGAAAACCGCATTATGGACATTAACTACAAGACAGAATGAGTTAAAATGGATCTTACACCAATAAGTATTGGATATATATTGTACAACACCCTTGAGTTTTGGAGGCAAGTAACTTAAACTCATTCAGACTTCATCTCCAAATGTGCTTTTATGCCTTTAAACAAAAAGGGGATTCCTTTAAGGGGTTCTTCATGGCTGTAGAAGACATCTATCATGGATACAATCTTCTCCTTTCTGAGTTGTTACTTCTTTGACTTTTATAGTATTGTTGTGATTTTTCTTTAATTTTTCATATAATTCTATGTATCCTCCCTTATGAATTTCTAGTCATTTAACTCACCGAAAAAAAGAACGTGTCCGGTTAAAGGTTGTTTAAATTTATCTCTTACGCATTTCTGTTACTCTCTCCTCTCTCTCTCAAACGTGCACACTTTGTTTAATGATCTGCAGGATATTTGGACAGAATTAGGCCGCCCTTGTGGGATCCATCAAAAACAGGTATCCTTACATGCTACCTTGAACTATAAGTCGCGAGTTTCATAAACATTGCTATGATTATAATTGTTTAAAGATATATTAAATTAATTATGTTGAGCTGAGTTTGCTGTAGAATTTACATTTGAAGCCTTGACCTATTTTTTTTTTTGGGGGTGGTGGGGGGAAGGTTACAAGCAATCAGGCATCTTGGGCTTAATTATGCGACTAGTTAAATTTATGTGCATATATCAAAATTCAAGAGTGAAGACATGGATGCACATGCCATGCATAGATGCACGCTTTTGTTTCTGTATATTTCTTTCTTTGATATCCTAAAATCTTGGGAGTTTTGGTTTTTCTTGTTCAGGTAGATCAAATGGTTATTCATTCTGCTTCAGATCCCCGTCCCAGGACAACCCTTTGTGGTGATTACTTCTACAACTATTTTACCCGTGGTTTGGACATCTTATTTGATGGGCAGGTACTTGGATGGCTTTCTATTTATTAATGTAGCCTTTCTCGTGGTATATATTGATCTTTTGAGCTTTATAGTTCTAATTACCGTGTTTGATTTGCACTTGCAGACTCATAAAATCAAGAAGTTTGTTTTGCATACCAATTACCCTGGCCATGCTGATTTCAATTCATACATCAAGTGCAATTTTGTAATCCATGGTTCGGACCTACATGAAACATCACTCTCTACTTTTCTTTAGAATTATTTGTGCGAGAGTGACTGACCATTATAGTGCTGTTTCATGCAGTTTCAGGTTCTTTTGATGAAACGGACAGTAAAAACTCTATAACCCCTAGCACCAAGTGGGAAGATGTGAAGGTAGGATGGATTTTGCTCAAATTATTTTATCACGTCGGTTTCTTATATATGTTGTCAGGAGCTGGTTTAGACCTGTCTTGATTGAAGCCTATTTGATGGCACATATTTTTGTATTTATCAACATTTGATCATCTGTAATGGATTCATAACTCTGTAAAAATAGCTAATCATCATCAATTTTTTCCCAGATTGGAGTTCTTACACTCCTTTTCCGTGTTCAATTTTTTTTTTGGTGGTAAATATGGAATGTCTGACATTTTTTTTAATGAAACTAGGAAATCCTCGGGGATTGTGGGCGAGCTGCCATCCAAACACAAGGTTCAACAAACAATCCTTTTGGATCTACTTTCGTCTATGGCTATCAGAACGTTGCATTTGAGGTGGGTTTTTACACTTTTGTTTGTTTTTATTAGTGTTTTACTTTGCACCTTCCTATCTTGAAAACCATAAGTTGAGGTAAAGGAACAAATGATTTTGAGCACACAAACATTACGAATTGATTGTGTTATTAAAGGCAGTGTGCTAATGAGCATCAATGGCATGGGCAGGTGATGAAAAATGGTTACATCGCCACAGTTACCCTCTTCAAGTCATGATATATAGGCGCTTTGCTTCCCCTTGTCGGTTTGTTTCAAGCTAATTATATGGAGTTGGGGAAAGATGGCTTCTTGCTCTTGTTCAATTTGTAATGGCTGTTTAAAGAAAGTGAAGTGAGCTACTAATATGGTTTAGTTCTTGATCACTTCATTGCTGGCTTGGTTATGTGGGTTATATCTGTAGCCATCTTGTCTGTGTATATTCTCACCTTGTATAAAGCAGCAAATACTCAACTAGGCATTAATTATCATGTTGGACAGCATAACGATGTACATAACTATTGATTTGTAAATAATATGATACTGTTTTAATTACATTGTTCAGTGGATCTTGTCCCCCAGCATTGATTTTTGTAGTTCATGCCGAGGTTAAACGACAACTCTAGCGATCACTGTGGGCAGCTCGATGGAATACATGTGAGTTCTCTATAACTTATTTTAGACTGATGATGAGAAGTGTTTTAATTCAACTAAAAGTATTTTGCCAGAATTTCACAATGTTCGTTCGGACACATTACCAAAAGTAAATTTAAAATATAGAAATACAAAGTACTAACAGTGGTTATATATAAAAACAGGTGCCTTTGTTGAAAGCATCAATTCAAGTCGAGTCTGTTTTGGATAACTTATCATAGATAGAAAAGAAAAAGAAAGAACAATACAGTGGAACTTAGCTTTGCCTTAGGCTCAGGTACGAAACAAATTTTAAAACGGTAGAGATTTTACCATAGCATTTCAACCATATTTCCTAAACTAAAAACGTTTGAAAAATGTTCC

mRNA sequence

ATGAAGCTGGGCCGAGGCCCAATGCTTCGTTTTGTTTGCAATACTAGACATGATTTATTGACATTGCTCGATGACTTGCTTCTAGGCATTGATTTCGGTTGCCTGTGTTTTGGAGTTAGCGTGGGAAGTGGGAAGACCAAGAAGCGAATTTCCGAACTGTGCAATACAAAACTTGGCATTAGAAATCTGAATTCTCACCACCTGTCTTCCTTCAATCGCGAAACCCACGGAACCGAAAAATCGAACCATCCAATTATCCAACCAAACCCCCAACGATGCAGAGATCCAGAAGACGCTGTGAGGGCACGGCTATGGGTGCCATCGTCCTCGATCTTCAACCCGGCCTTGGCCTCGGCCCCTTCAATCTCGGAACTTATGCGCCTCAGTTGTGTTGTTGTCCCAGGAATGCCAATTTGTGAAGCATTTGCACAAATAGAGCAGCGCCCTAACATCTATGACGTTGTCCATGTGAAATACTTCGACGAGGAGCCACTGAAACTCGATATCGTTATCAGCTTCCCAGACCATGGTTTTCATCTTCGCTTTGACCCGTGGTCACAGAGGCTACGTCTTATTGAAATATTTGATGTAAAGCGACTTCAAATGCGTTATGCTACTTCTCTGATTGGGGACTTTCATTTGCATTTCCAATACCAGGCCAATATACAGATTGTTGCCATGATGGAGAAGAGTTCTAAGGAGAATAACTTGCTACTCTTAACTACCAAAGCGGAGCTACCTTTGGAGTTTCCTGATGGTACGACCCCAGTTGCTTGTCGAGTCTCCATATTTGATAGTTCTACAGTAAAAAAGGTTGGAGTAGGAGCCTTAATGGATAAGGCTTCTGCTCCCCCATTGCCTGCTAGCAGCCTTTATATGGAGGAGGTCCATGTTAAGCTTGGTGATGAATTATACTTTGCTGTGGGTAGTCAGCATATTCCTTTTGGTGCATCACCACAGGATATTTGGACAGAATTAGGCCGCCCTTGTGGGATCCATCAAAAACAGGTAGATCAAATGGTTATTCATTCTGCTTCAGATCCCCGTCCCAGGACAACCCTTTGTGGTGATTACTTCTACAACTATTTTACCCGTGGTTTGGACATCTTATTTGATGGGCAGACTCATAAAATCAAGAAGTTTGTTTTGCATACCAATTACCCTGGCCATGCTGATTTCAATTCATACATCAAGTGCAATTTTGTAATCCATGGTTCTTTTGATGAAACGGACAGTAAAAACTCTATAACCCCTAGCACCAAGTGGGAAGATGTGAAGGAAATCCTCGGGGATTGTGGGCGAGCTGCCATCCAAACACAAGGTTCAACAAACAATCCTTTTGGATCTACTTTCGTCTATGGCTATCAGAACGTTGCATTTGAGTTCATGCCGAGGTTAAACGACAACTCTAGCGATCACTGTGGGCAGCTCGATGGAATACATGTGCCTTTGTTGAAAGCATCAATTCAAGTCGAGTCTGTTTTGGATAACTTATCATAGATAGAAAAGAAAAAGAAAGAACAATACAGTGGAACTTAGCTTTGCCTTAGGCTCAGGTACGAAACAAATTTTAAAACGGTAGAGATTTTACCATAGCATTTCAACCATATTTCCTAAACTAAAAACGTTTGAAAAATGTTCC

Coding sequence (CDS)

ATGAAGCTGGGCCGAGGCCCAATGCTTCGTTTTGTTTGCAATACTAGACATGATTTATTGACATTGCTCGATGACTTGCTTCTAGGCATTGATTTCGGTTGCCTGTGTTTTGGAGTTAGCGTGGGAAGTGGGAAGACCAAGAAGCGAATTTCCGAACTGTGCAATACAAAACTTGGCATTAGAAATCTGAATTCTCACCACCTGTCTTCCTTCAATCGCGAAACCCACGGAACCGAAAAATCGAACCATCCAATTATCCAACCAAACCCCCAACGATGCAGAGATCCAGAAGACGCTGTGAGGGCACGGCTATGGGTGCCATCGTCCTCGATCTTCAACCCGGCCTTGGCCTCGGCCCCTTCAATCTCGGAACTTATGCGCCTCAGTTGTGTTGTTGTCCCAGGAATGCCAATTTGTGAAGCATTTGCACAAATAGAGCAGCGCCCTAACATCTATGACGTTGTCCATGTGAAATACTTCGACGAGGAGCCACTGAAACTCGATATCGTTATCAGCTTCCCAGACCATGGTTTTCATCTTCGCTTTGACCCGTGGTCACAGAGGCTACGTCTTATTGAAATATTTGATGTAAAGCGACTTCAAATGCGTTATGCTACTTCTCTGATTGGGGACTTTCATTTGCATTTCCAATACCAGGCCAATATACAGATTGTTGCCATGATGGAGAAGAGTTCTAAGGAGAATAACTTGCTACTCTTAACTACCAAAGCGGAGCTACCTTTGGAGTTTCCTGATGGTACGACCCCAGTTGCTTGTCGAGTCTCCATATTTGATAGTTCTACAGTAAAAAAGGTTGGAGTAGGAGCCTTAATGGATAAGGCTTCTGCTCCCCCATTGCCTGCTAGCAGCCTTTATATGGAGGAGGTCCATGTTAAGCTTGGTGATGAATTATACTTTGCTGTGGGTAGTCAGCATATTCCTTTTGGTGCATCACCACAGGATATTTGGACAGAATTAGGCCGCCCTTGTGGGATCCATCAAAAACAGGTAGATCAAATGGTTATTCATTCTGCTTCAGATCCCCGTCCCAGGACAACCCTTTGTGGTGATTACTTCTACAACTATTTTACCCGTGGTTTGGACATCTTATTTGATGGGCAGACTCATAAAATCAAGAAGTTTGTTTTGCATACCAATTACCCTGGCCATGCTGATTTCAATTCATACATCAAGTGCAATTTTGTAATCCATGGTTCTTTTGATGAAACGGACAGTAAAAACTCTATAACCCCTAGCACCAAGTGGGAAGATGTGAAGGAAATCCTCGGGGATTGTGGGCGAGCTGCCATCCAAACACAAGGTTCAACAAACAATCCTTTTGGATCTACTTTCGTCTATGGCTATCAGAACGTTGCATTTGAGTTCATGCCGAGGTTAAACGACAACTCTAGCGATCACTGTGGGCAGCTCGATGGAATACATGTGCCTTTGTTGAAAGCATCAATTCAAGTCGAGTCTGTTTTGGATAACTTATCATAG

Protein sequence

MKLGRGPMLRFVCNTRHDLLTLLDDLLLGIDFGCLCFGVSVGSGKTKKRISELCNTKLGIRNLNSHHLSSFNRETHGTEKSNHPIIQPNPQRCRDPEDAVRARLWVPSSSIFNPALASAPSISELMRLSCVVVPGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKSSKENNLLLLTTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHGSFDETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFMPRLNDNSSDHCGQLDGIHVPLLKASIQVESVLDNLS

Homology

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BLAST of Lsi01G006210 vs. ExPASy Swiss-Prot
Match: Q9SD33 (PHAF1 protein At3g51130 OS=Arabidopsis thaliana OX=3702 GN=At3g51130 PE=1 SV=2)

HSP 1 Score: 522.3 bits (1344), Expect = 5.9e-147
Identity = 255/354 (72.03%), Postives = 280/354 (79.10%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQ+PNIYDVVHVKY+DE+PLKLD+VISFPDHGFHLRFDPWSQRLRL+EI
Sbjct: 44  GMPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEI 103

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS--SKENNLLLL------------ 254
           FDVKRLQMRYATS+IG       + A   +          KE  +  L            
Sbjct: 104 FDVKRLQMRYATSMIGGPSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIP 163

Query: 255 --------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLY 314
                     +A LPLEFPDGTTPV CRVSI+D+S+ KKVGVG LMD+AS PPLP  SLY
Sbjct: 164 NQYTDCCHDGEAALPLEFPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLY 223

Query: 315 MEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRT 374
           MEEVHVK G ELYF VG QH+PFGASPQD+WTELGRPCGIH KQVDQMVIHSASDPRP+T
Sbjct: 224 MEEVHVKPGKELYFTVGGQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKT 283

Query: 375 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHGSFDETD- 434
           T+CGDYFYNYFTRGLDILFDG+THK+KKFVLHTNYPGHADFNSYIKCNFVI    D  + 
Sbjct: 284 TICGDYFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISAGADAAEA 343

Query: 435 --SKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
             S N ITPST W+ VKEILG+CG AAIQTQGST+NPFGST+VYGYQNVAFE M
Sbjct: 344 NRSGNKITPSTNWDQVKEILGECGPAAIQTQGSTSNPFGSTYVYGYQNVAFEVM 397

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BLAST of Lsi01G006210 vs. ExPASy Swiss-Prot
Match: Q9BSU1 (Phagosome assembly factor 1 OS=Homo sapiens OX=9606 GN=PHAF1 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.7e-43
Identity = 120/383 (31.33%), Postives = 189/383 (49.35%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMP+ +A A +++   I   V V Y ++ PL  D++++    G  L FD ++QRL++IE+
Sbjct: 22  GMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLMFDAFNQRLKVIEV 81

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS----------SKENNLLL----- 254
            D+ +++++Y         +HF  QA    +  +++S          S E    L     
Sbjct: 82  CDLTKVKLKYC-------GVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGL 141

Query: 255 -----LTTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGV--GALMDKASAPPLPAS--- 314
                L +  E P   P+    +A  + I   +TVK++ +  G  +    AP +P S   
Sbjct: 142 SFSFQLDSWTEAPKYEPNFAHGLA-SLQIPHGATVKRMYIYSGNSLQDTKAPMMPLSCFL 201

Query: 315 -SLYMEEVHV---------------------KLGDELYFAVGSQHIPFGASPQDIWTELG 374
            ++Y E V V                      L  +    V  + + FG S QD+ + LG
Sbjct: 202 GNVYAESVDVLRDGTGPAGLRLRLLAAGCGPGLLADAKMRVFERSVYFGDSCQDVLSMLG 261

Query: 375 RPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNY 434
            P  +  K  D+M IHS S  +   + C DYF+NYFT G+DILFD  THK+KKFVLHTNY
Sbjct: 262 SPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNY 321

Query: 435 PGHADFNSYIKCNFVIHGSFDETDS---KNSITPSTKWEDVKEILGDCGRAAIQTQGSTN 464
           PGH +FN Y +C F I  +  + ++     + T  +KW++++E+LG      +    S++
Sbjct: 322 PGHYNFNIYHRCEFKIPLAIKKENADGQTETCTTYSKWDNIQELLGHPVEKPVVLHRSSS 381

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BLAST of Lsi01G006210 vs. ExPASy Swiss-Prot
Match: O08654 (Phagosome assembly factor 1 OS=Rattus norvegicus OX=10116 GN=Phaf1 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.0e-42
Identity = 119/383 (31.07%), Postives = 188/383 (49.09%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMP+ +A A +++   I   V V Y ++ PL  D++++    G  L FD ++QRL++IE+
Sbjct: 22  GMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLLFDAFNQRLKVIEV 81

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS----------SKENNLLL----- 254
           +D+ +++++Y         +HF  QA    +  +++S          S E    L     
Sbjct: 82  YDLTKVKLKYC-------GVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGL 141

Query: 255 -----LTTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGV--GALMDKASAPPLPAS--- 314
                L +  E P   P+    +A  + I   +TVK++ +  G  +    AP +P S   
Sbjct: 142 SFSFQLDSWTEAPKYEPNFAHGLA-SLQIPHGATVKRMYIYSGNSLQDTKAPMMPLSCFL 201

Query: 315 -SLYMEEVHV---------------------KLGDELYFAVGSQHIPFGASPQDIWTELG 374
            ++Y E V V                      +  +    V  + + FG S QD+ + LG
Sbjct: 202 GNVYAESVDVIRDGTGPSGLRLRLLAAGCGPGVLADAKMRVFERAVYFGDSCQDVLSMLG 261

Query: 375 RPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNY 434
            P  +  K  D+M IHS S  +   + C DYF+NYFT G+DILFD  THK+KKFVLHTNY
Sbjct: 262 SPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNY 321

Query: 435 PGHADFNSYIKCNFVIHGSFDETDSKNS---ITPSTKWEDVKEILGDCGRAAIQTQGSTN 464
           PGH +FN Y +C F I  +  + ++       T  +KW+ ++E+LG      +    S++
Sbjct: 322 PGHYNFNIYHRCEFKIPLAIKKENAGGQTEICTTYSKWDSIQELLGHPVEKPVVLHRSSS 381

[Close]

BLAST of Lsi01G006210 vs. ExPASy Swiss-Prot
Match: Q9VSH9 (PHAF1 protein CG7083 OS=Drosophila melanogaster OX=7227 GN=CG7083 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.4e-42
Identity = 130/400 (32.50%), Postives = 183/400 (45.75%), Query Frame = 0


Query: 133 VPGMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLI 192
           V GM   +A A I+ +  I   V V Y D  PL +DI+I+ P  G  L FDP SQRL+ I
Sbjct: 20  VLGMHFSQAIAIIQSQVGIIKGVQVLYSDTTPLGVDIIINLPQDGVRLIFDPVSQRLKTI 79

Query: 193 EIFDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKSSKENNLLLLTTKAEL------ 252
           E+F++K +++RY       F ++F     +  +  +E S    +  +     +L      
Sbjct: 80  EVFNMKLVKLRY-------FGVYFNSPEVLPSIEQIEHSFGATHPGVYDAAKQLFALHFR 139

Query: 253 ---------------------PLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPP 312
                                 L F +G +PV  ++S++  S V +  V         P 
Sbjct: 140 GLSFYFPVDSKLHSGYAHGLSSLVFLNGASPVVSKMSLYAGSNVLENRV---------PS 199

Query: 313 LPAS----SLYMEEV--------HVKLGDELYFAVGS------------QHIPFGASPQD 372
           LP S     +Y+E          H K      F  GS            + + FG S +D
Sbjct: 200 LPLSCYHRQMYLESATVLRTAFGHTKGLKLKLFTEGSGRALEPRRQCFTRELLFGDSCED 259

Query: 373 IWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKF 432
           + T LG P  I  K  D+M IHS+S  R   +   D F+NYFT G+D+LFD +T   KKF
Sbjct: 260 VATSLGAPNRIFFKSEDKMKIHSSSVNRQAQSKRSDIFFNYFTLGIDVLFDARTQTCKKF 319

Query: 433 VLHTNYPGHADFNSYIKCNFVI-----HGSFDE------TDSKN---SITPSTKWEDVKE 465
           +LHTNYPGH +FN Y +C F       H S  +      T +K    +IT  TKW+ +  
Sbjct: 320 ILHTNYPGHFNFNMYHRCEFQFLLQADHPSMSDSGHDLVTPTKQEHVNITAYTKWDAISS 379

[Close]

BLAST of Lsi01G006210 vs. ExPASy Swiss-Prot
Match: Q922R1 (Phagosome assembly factor 1 OS=Mus musculus OX=10090 GN=Phaf1 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 1.2e-41
Identity = 120/384 (31.25%), Postives = 188/384 (48.96%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMP+ +A A +++   I   V V Y ++ PL  D++++    G  L FD ++QRL++IE+
Sbjct: 22  GMPLAQAVAILQKHCRIIRNVQVLYSEQSPLSHDLILNLTQDGITLLFDAFNQRLKVIEV 81

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS----------SKENNLLL----- 254
            ++ +++++Y         +HF  QA    +  +++S          S E    L     
Sbjct: 82  CELTKVKLKYC-------GVHFNSQAIAPTIEQIDQSFGATHPGVYNSTEQLFHLNFRGL 141

Query: 255 -----LTTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGV--GALMDKASAPPLPAS--- 314
                L +  E P   P+    +A  + I   +TVK++ +  G  +    AP +P S   
Sbjct: 142 SFSFQLDSWTEAPKYEPNFAHGLA-SLQIPHGATVKRMYIYSGNSLQDTKAPVMPLSCFL 201

Query: 315 -SLYMEEVHVKLGD----------------------ELYFAVGSQHIPFGASPQDIWTEL 374
            ++Y E V V L D                      +    V  + + FG S QD+ + L
Sbjct: 202 GNVYAESVDV-LRDGTGPSGLRLRLLAAGCGPGVLADAKMRVFERAVYFGDSCQDVLSML 261

Query: 375 GRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTN 434
           G P  +  K  D+M IHS S  +   + C DYF+NYFT G+DILFD  THK+KKFVLHTN
Sbjct: 262 GSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTN 321

Query: 435 YPGHADFNSYIKCNFVIHGSFDETDSKNS---ITPSTKWEDVKEILGDCGRAAIQTQGST 464
           YPGH +FN Y +C F I  +  + ++       T  +KW+ ++E+LG      +    S+
Sbjct: 322 YPGHYNFNIYHRCEFKIPLAIKKENAGGQTEICTTYSKWDSIQELLGHPVEKPVVLHRSS 381

[Close]

BLAST of Lsi01G006210 vs. ExPASy TrEMBL
Match: A0A0A0KH65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505220 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 1.5e-164
Identity = 294/356 (82.58%), Postives = 304/356 (85.39%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVG+GALMDKASAPPLPAS
Sbjct: 153 PIPSQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPPLPAS 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DET+ KN+ITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DETNCKNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210 vs. ExPASy TrEMBL
Match: A0A5D3CN38 (UPF0183 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001500 PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 4.3e-164
Identity = 293/356 (82.30%), Postives = 303/356 (85.11%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVG+GALMDKASAPPLPA 
Sbjct: 153 PIPNQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPPLPAG 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DET+ KN+ITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DETNCKNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210 vs. ExPASy TrEMBL
Match: A0A1S3B1H9 (UPF0183 protein At3g51130 OS=Cucumis melo OX=3656 GN=LOC103485106 PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 4.3e-164
Identity = 293/356 (82.30%), Postives = 303/356 (85.11%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVG+GALMDKASAPPLPA 
Sbjct: 153 PIPNQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPPLPAG 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DET+ KN+ITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DETNCKNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210 vs. ExPASy TrEMBL
Match: A0A6J1KNX2 (UPF0183 protein At3g51130 OS=Cucurbita maxima OX=3661 GN=LOC111497351 PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 1.2e-163
Identity = 292/353 (82.72%), Postives = 299/353 (84.70%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 32  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 91

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKSSKENNLLLLTT------------ 254
           FDVKRLQMRYATSLIG       + A   +         + +  + T             
Sbjct: 92  FDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIP 151

Query: 255 ----------KAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLY 314
                     +AELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPA SLY
Sbjct: 152 SQYSDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAGSLY 211

Query: 315 MEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRT 374
           MEEVHVKLGDELYFAVG QHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSA DPRPRT
Sbjct: 212 MEEVHVKLGDELYFAVGGQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSALDPRPRT 271

Query: 375 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSFDET 434
           TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSFDET
Sbjct: 272 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSFDET 331

Query: 435 DSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           + KNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 332 NCKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 384

[Close]

BLAST of Lsi01G006210 vs. ExPASy TrEMBL
Match: A0A6J1HFL0 (UPF0183 protein At3g51130 OS=Cucurbita moschata OX=3662 GN=LOC111463505 PE=3 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 3.6e-163
Identity = 291/353 (82.44%), Postives = 300/353 (84.99%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 32  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 91

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKSSKENNLLLLTT------------ 254
           FDVKRLQMRYATSLIG       + A   +         + +  + T             
Sbjct: 92  FDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIP 151

Query: 255 ----------KAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLY 314
                     +AELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPA+SLY
Sbjct: 152 SQYSDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAASLY 211

Query: 315 MEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRT 374
           MEEVHVKLGDELYFAVG QHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSA DPRPRT
Sbjct: 212 MEEVHVKLGDELYFAVGGQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSALDPRPRT 271

Query: 375 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSFDET 434
           TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF+ET
Sbjct: 272 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSFNET 331

Query: 435 DSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           + KNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 332 NCKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 384

[Close]

BLAST of Lsi01G006210 vs. NCBI nr
Match: XP_038882858.1 (UPF0183 protein At3g51130 isoform X1 [Benincasa hispida])

HSP 1 Score: 589.7 bits (1519), Expect = 2.3e-164
Identity = 295/356 (82.87%), Postives = 304/356 (85.39%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPA+
Sbjct: 153 PIPSQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAN 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DE +SKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DEANSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210 vs. NCBI nr
Match: XP_004134877.1 (UPF0183 protein At3g51130 [Cucumis sativus] >KGN48893.1 hypothetical protein Csa_004105 [Cucumis sativus])

HSP 1 Score: 589.3 bits (1518), Expect = 3.0e-164
Identity = 294/356 (82.58%), Postives = 304/356 (85.39%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVG+GALMDKASAPPLPAS
Sbjct: 153 PIPSQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPPLPAS 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DET+ KN+ITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DETNCKNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210 vs. NCBI nr
Match: XP_008440791.1 (PREDICTED: UPF0183 protein At3g51130 [Cucumis melo] >KAA0025693.1 UPF0183 protein [Cucumis melo var. makuwa] >TYK12568.1 UPF0183 protein [Cucumis melo var. makuwa])

HSP 1 Score: 587.8 bits (1514), Expect = 8.8e-164
Identity = 293/356 (82.30%), Postives = 303/356 (85.11%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVG+GALMDKASAPPLPA 
Sbjct: 153 PIPNQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGIGALMDKASAPPLPAG 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           DET+ KN+ITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 333 DETNCKNTITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 385

[Close]

BLAST of Lsi01G006210 vs. NCBI nr
Match: XP_038882859.1 (UPF0183 protein At3g51130 isoform X2 [Benincasa hispida])

HSP 1 Score: 587.8 bits (1514), Expect = 8.8e-164
Identity = 294/354 (83.05%), Postives = 303/354 (85.59%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 33  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 92

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS-----SKENNLLLL--------- 254
           FDVKRLQMRYATSLIG           + + A+   +      K+  +  L         
Sbjct: 93  FDVKRLQMRYATSLIGG---PSNLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAF 152

Query: 255 -----------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAS 314
                        +AELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPA+
Sbjct: 153 PIPSQYTDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAN 212

Query: 315 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 374
           SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR
Sbjct: 213 SLYMEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPR 272

Query: 375 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSF 434
           PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSF
Sbjct: 273 PRTTLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSF 332

Query: 435 DETDSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE 462
           DE +SKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE
Sbjct: 333 DEANSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE 383

[Close]

BLAST of Lsi01G006210 vs. NCBI nr
Match: XP_023003902.1 (UPF0183 protein At3g51130 [Cucurbita maxima])

HSP 1 Score: 586.3 bits (1510), Expect = 2.6e-163
Identity = 292/353 (82.72%), Postives = 299/353 (84.70%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI
Sbjct: 32  GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 91

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKSSKENNLLLLTT------------ 254
           FDVKRLQMRYATSLIG       + A   +         + +  + T             
Sbjct: 92  FDVKRLQMRYATSLIGGPSNLATFVAVYALFGPTFPGINDRDRSVYTLFYPGLSFAFPIP 151

Query: 255 ----------KAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLY 314
                     +AELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPA SLY
Sbjct: 152 SQYSDCCHDGEAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPAGSLY 211

Query: 315 MEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRT 374
           MEEVHVKLGDELYFAVG QHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSA DPRPRT
Sbjct: 212 MEEVHVKLGDELYFAVGGQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSALDPRPRT 271

Query: 375 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH--GSFDET 434
           TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIH  GSFDET
Sbjct: 272 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHVSGSFDET 331

Query: 435 DSKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
           + KNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFE M
Sbjct: 332 NCKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVM 384

[Close]

BLAST of Lsi01G006210 vs. TAIR 10
Match: AT3G51130.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). )

HSP 1 Score: 522.3 bits (1344), Expect = 4.2e-148
Identity = 255/354 (72.03%), Postives = 280/354 (79.10%), Query Frame = 0


Query: 135 GMPICEAFAQIEQRPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEI 194
           GMPICEAFAQIEQ+PNIYDVVHVKY+DE+PLKLD+VISFPDHGFHLRFDPWSQRLRL+EI
Sbjct: 44  GMPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEI 103

Query: 195 FDVKRLQMRYATSLIGDFHLHFQYQANIQIVAMMEKS--SKENNLLLL------------ 254
           FDVKRLQMRYATS+IG       + A   +          KE  +  L            
Sbjct: 104 FDVKRLQMRYATSMIGGPSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIP 163

Query: 255 --------TTKAELPLEFPDGTTPVACRVSIFDSSTVKKVGVGALMDKASAPPLPASSLY 314
                     +A LPLEFPDGTTPV CRVSI+D+S+ KKVGVG LMD+AS PPLP  SLY
Sbjct: 164 NQYTDCCHDGEAALPLEFPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLY 223

Query: 315 MEEVHVKLGDELYFAVGSQHIPFGASPQDIWTELGRPCGIHQKQVDQMVIHSASDPRPRT 374
           MEEVHVK G ELYF VG QH+PFGASPQD+WTELGRPCGIH KQVDQMVIHSASDPRP+T
Sbjct: 224 MEEVHVKPGKELYFTVGGQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKT 283

Query: 375 TLCGDYFYNYFTRGLDILFDGQTHKIKKFVLHTNYPGHADFNSYIKCNFVIHGSFDETD- 434
           T+CGDYFYNYFTRGLDILFDG+THK+KKFVLHTNYPGHADFNSYIKCNFVI    D  + 
Sbjct: 284 TICGDYFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISAGADAAEA 343

Query: 435 --SKNSITPSTKWEDVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEFM 464
             S N ITPST W+ VKEILG+CG AAIQTQGST+NPFGST+VYGYQNVAFE M
Sbjct: 344 NRSGNKITPSTNWDQVKEILGECGPAAIQTQGSTSNPFGSTYVYGYQNVAFEVM 397

The following BLAST results are available for this feature:

BLAST of Lsi01G006210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD33	5.9e-147	72.03	PHAF1 protein At3g51130 OS=Arabidopsis thaliana OX=3702 GN=At3g51130 PE=1 SV=2	[more]
Q9BSU1	4.7e-43	31.33	Phagosome assembly factor 1 OS=Homo sapiens OX=9606 GN=PHAF1 PE=1 SV=1	[more]
O08654	1.0e-42	31.07	Phagosome assembly factor 1 OS=Rattus norvegicus OX=10116 GN=Phaf1 PE=2 SV=1	[more]
Q9VSH9	1.4e-42	32.50	PHAF1 protein CG7083 OS=Drosophila melanogaster OX=7227 GN=CG7083 PE=2 SV=1	[more]
Q922R1	1.2e-41	31.25	Phagosome assembly factor 1 OS=Mus musculus OX=10090 GN=Phaf1 PE=1 SV=2	[more]

BLAST of Lsi01G006210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH65	1.5e-164	82.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505220 PE=3 SV=1	[more]
A0A5D3CN38	4.3e-164	82.30	UPF0183 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0015...	[more]
A0A1S3B1H9	4.3e-164	82.30	UPF0183 protein At3g51130 OS=Cucumis melo OX=3656 GN=LOC103485106 PE=3 SV=1	[more]
A0A6J1KNX2	1.2e-163	82.72	UPF0183 protein At3g51130 OS=Cucurbita maxima OX=3661 GN=LOC111497351 PE=3 SV=1	[more]
A0A6J1HFL0	3.6e-163	82.44	UPF0183 protein At3g51130 OS=Cucurbita moschata OX=3662 GN=LOC111463505 PE=3 SV=...	[more]

BLAST of Lsi01G006210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882858.1	2.3e-164	82.87	UPF0183 protein At3g51130 isoform X1 [Benincasa hispida]	[more]
XP_004134877.1	3.0e-164	82.58	UPF0183 protein At3g51130 [Cucumis sativus] >KGN48893.1 hypothetical protein Csa...	[more]
XP_008440791.1	8.8e-164	82.30	PREDICTED: UPF0183 protein At3g51130 [Cucumis melo] >KAA0025693.1 UPF0183 protei...	[more]
XP_038882859.1	8.8e-164	83.05	UPF0183 protein At3g51130 isoform X2 [Benincasa hispida]	[more]
XP_023003902.1	2.6e-163	82.72	UPF0183 protein At3g51130 [Cucurbita maxima]	[more]

BLAST of Lsi01G006210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51130.1	4.2e-148	72.03	unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005373	Phagosome assembly factor 1	PFAM	PF03676	UPF0183	coord: 241..464 e-value: 1.5E-76 score: 258.3 coord: 135..219 e-value: 8.9E-26 score: 91.1
IPR005373	Phagosome assembly factor 1	PANTHER	PTHR13465:SF2	UPF0183 PROTEIN C16ORF70	coord: 240..463
IPR005373	Phagosome assembly factor 1	PANTHER	PTHR13465:SF2	UPF0183 PROTEIN C16ORF70	coord: 135..210
IPR039156	PHAF1/Protein broad-minded	PANTHER	PTHR13465	UPF0183 PROTEIN	coord: 240..463
IPR039156	PHAF1/Protein broad-minded	PANTHER	PTHR13465	UPF0183 PROTEIN	coord: 135..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G006210.1	Lsi01G006210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane