Lcy10g000580.1 (mRNA) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTAGCCTCAAAAGCCATGCGGGCGTCACGACTACGCTCTAGCTGAGCCGCCATGGCCAGTTCTTGCCCAATCCACCTCACCCAACTCATCCAAAAATGGCTGCTAGTCTTCAATTTCGATTCCACTCGTCAATTGGGTCTTTTGACCCTTTATCTACTCTCAAGTCCCCATCTTTTCTCTCTCGATTCCGACCAGTTTCTGTCTCTTTCAGCTCCATCTCTGCTCCAATTTTGCGCTCCGATACCTTCATTTTCAGGTTCGGGTCGAACTGCAACCTGAAAATCCGCCGGAAACGGTACCCAGTTGCGGCGGTTATGTTGTTGCCTGATAATCCGGTGGTCTCCGATGTCTGCGCCACCGCTTTGTCCGGTGGAGTCGCCTTGTCTTTGCTTCGATTGTGGGCGGAAACGGCGAAACGTGGTCTCGATCAGGTTCTAATTCTTTTATTCATTGATTTGCTGTTTTTCTTGTCGTTTACTTCGTTTTTTTCTTTTTCTTTCTTTGGGCAATTGCTTGGTTTCTACGAAATTTAGTATAAGTTTTGCTCTGAAAAGAAATTATGGAAGGAATCCCAATAATGATTAACTTTTGGGGTTTTCTTGGGGTGCATTTGAGAGTGGTTTTTAAGTAAGTGTTTTAGCAAAAAGTGCTCAGTGGAAAATATTTTGATGTTTGATTCCACTTGTGCTTTTGGGCCAATAAGGCAATAACGCTCTAGTTTGTGGGGAGTTTTTCTCCATACATAAAGCACTTTTAAAGGATTTTGACCTTTTTTTATTTTGTACAAAAATCACTTTTATGTTATTGATTTGATTTTAAGTGGCAAGTGCCTTTTGGATTGGTCATGTCTAAAGCACTCTAAAACATAACATCAGTTGTCAATCCAAGCACAATTAAGTGGATAAAACACTTATCGATGGTTTGTATCTCTCCTCTCATAATTGTTGAACTAAAAAAGCATAATGTTAGTGAATATTTTACCCTTTTTCTCCTAAAGTTTCCTGTTAGATTTATTTATAACACGTTATTATATGATTTCTAGTATAATCGAAGAAATTATGTCGAAATAAATACGAGAGAATTTCATGTAACTGTGAGTTTTAGAAGGTCGTAGCTTATAAGGATTGCCCCCAAACTGATTATGGTAGTTGATATTCTGTTCTTGACCTTAGTATTAGTACTGATATACCATAAGAAAATGATAGGTTCAGTTCAACAAGCGCATGTTCTGTGTACAGTACTGATAAATAATCAATATTATGCATACTTTGACATTGGAAAATGGAAATGTCAAGTCTTCAAATTGTGAAAATCCAACTTTCCAATTCTGATCTTGTATCATAGCTCTGTACTTACCTATACTTGGTTTAGAAATTGAACAGGAAGCTTGTTCATATAAGCATTGGGCTTGCCTTCATGCTCTGCTGGCCTATGTTCAGGTGAACTTAGACTGCAAAAAGTTAAATTCTGGCCCTTCCCCTGCTCCTATACTTGCACAAATATGCTTGAATCAAATGATGCTACTCTTTGTTGCAGTTCTGGTCGTCAAGGAGCGATATTGGCGTCTCTAATTCCCGGTGTCAATATAATACGAATGCTAGTCTTGGGACTGGGAATAATGAAAGATGAGGCTACAGTAAAGTCAATGAGCAGATATGGAGACTACAGGTATAACTTTGTAAAGAACATAATAGAGTAAAATAAGTTTCTGGGGTGCCTGTGTGTTAGTTGATTTGAGCTTCCTATTAAGTTCTATCTTTGACTGTACATATAGTTAACCAAATGAATGTTATCTGCTTGCCATTACAAGTCCTTTGGTAGCTAAAATGAAGGATATGGCTTATCTTCTGTTGTTGAATCTTTGAGAGGAAAAACTATCCACTCCATTTGTTAGATTCTCCTTCTATTCATTGTTTTCCATTTGGAATTCTTTTTGGTTCAATTGTAGTATCATTTACTAGTTCCACATGGCTGAAGATTAATGGTTGATAGTGTTTATTCCCATGTATAATAGTAGGACATCATGAAATGTCTTTCTCCAAGAGAATGCCAGAGAGTAAGAACCATTATGTGCATACAAATGTTGCACGATACTCACAAAAGCATATCGCATATTGTAATGTCATTTACTTGTTCTTTTGCTATCTCGTGAGGAGCGTGGCTCGAGAGGAATAGTAGAATTTTTAGAGAGGTAGAGAGGTCTTTGGAAGAAGAGTGGGAGGTGGTGAGATTTCATGCCTCTTTATGGACGAGAGTTAATCGGACTTTTTGTAATTATCAACTCAGTTTTATTCTTTTGGATTTGAGTCCTTTCCTGTAGGTAATTGAGAACTCCTTTTGTGGGCTTGTTTTTTTTGTATGTCTTTGTACATTCTTTCATTTTTCTGAATGAAAGCTTAATTTCTTAAAAAAAGAAAAAGTGGTTGGTTTGTGATTTACTTTTTAATATGACCTCTGTATATTTTCATCCATCAGGGAGCTTTTGAAGGGGCCTTTGTATTATGTTGCAACAATTACATTAGTTTGTATATTCTATTGGAGGACGTCCCCCATTTCAATTGCACTTATATGCAACTTATGTGCTGGAGATGGTATACTTTCACTTTTGTCCATCAGTTTAGGGCATGTTCGAGAGTTATTTTGGAATGGTCATGTCCAAAAATCACTAAAAAGCACATGACAAAAATGATTTTAGCCATTCCAAAATCACTCCCAACACCCCACAGAACAACGAAACCTGGTAACACTCTTCACGCTTTGTTATTTCAGGGTTGGCTGATATCGTTGGAAGACGATTTGGAAGTCAAAAGATCTCTTACAACAAAAACAAGTCACTAGCTGGTAGTGTGGCAATGGCATCTGCTGGTTTTCTTGCATCTGTTGGGTAAGTTCTTTCTTTCTCTTCGTTTCGAACTCGAGCATCGAGTGTCAAGTTACGAGCCACTGTCTGTGTGATCTTTCTGGGTTAGTTTAGAAATAAGAGGTGGCATTGTGATTGTGAATGGCAGGTATATGTACTATTTCTCCTCATTTGGGTATGTTGAGAGAAGCAGCAGAATGGTTTTGGGATTCTTGGTTGTGTCTGTTGCCTCAGCATTGGTAGAATCTCTTCCCATAAGCACTGAGATTGATGACAACCTCACTGTTCCACTCACTTCCTTCCTGGTAGGGAGCCTTGTTTTTTAGTATTTAGGATCCAACACACAAAGTTGCCACTAGAAGAGAATAGTCAAATGGGGATTTCTTACAAATCCTGCTTGTTATGTAGTGTTATTATCATATGACTTGAATAGATTTTACTGAACCAGCTGGTATCAGACATTGCTAATGAAATTCTATTGGTACCATTGTTATGATATGCATGTGATTATG CGTAGCCTCAAAAGCCATGCGGGCGTCACGACTACGCTCTAGCTGAGCCGCCATGGCCAGTTCTTGCCCAATCCACCTCACCCAACTCATCCAAAAATGGCTGCTAGTCTTCAATTTCGATTCCACTCGTCAATTGGGTCTTTTGACCCTTTATCTACTCTCAAGTCCCCATCTTTTCTCTCTCGATTCCGACCAGTTTCTGTCTCTTTCAGCTCCATCTCTGCTCCAATTTTGCGCTCCGATACCTTCATTTTCAGGTTCGGGTCGAACTGCAACCTGAAAATCCGCCGGAAACGGTACCCAGTTGCGGCGGTTATGTTGTTGCCTGATAATCCGGTGGTCTCCGATGTCTGCGCCACCGCTTTGTCCGGTGGAGTCGCCTTGTCTTTGCTTCGATTGTGGGCGGAAACGGCGAAACGTGGTCTCGATCAGAAATTGAACAGGAAGCTTGTTCATATAAGCATTGGGCTTGCCTTCATGCTCTGCTGGCCTATGTTCAGTTCTGGTCGTCAAGGAGCGATATTGGCGTCTCTAATTCCCGGTGTCAATATAATACGAATGCTAGTCTTGGGACTGGGAATAATGAAAGATGAGGCTACAGTAAAGTCAATGAGCAGATATGGAGACTACAGGGAGCTTTTGAAGGGGCCTTTGTATTATGTTGCAACAATTACATTAGTTTGTATATTCTATTGGAGGACGTCCCCCATTTCAATTGCACTTATATGCAACTTATGTGCTGGAGATGGGTTGGCTGATATCGTTGGAAGACGATTTGGAAGTCAAAAGATCTCTTACAACAAAAACAAGTCACTAGCTGGTAGTGTGGCAATGGCATCTGCTGGTTTTCTTGCATCTGTTGGGTATATGTACTATTTCTCCTCATTTGGGTATGTTGAGAGAAGCAGCAGAATGGTTTTGGGATTCTTGGTTGTGTCTGTTGCCTCAGCATTGGTAGAATCTCTTCCCATAAGCACTGAGATTGATGACAACCTCACTGTTCCACTCACTTCCTTCCTGGTAGGGAGCCTTGTTTTTTAGTATTTAGGATCCAACACACAAAGTTGCCACTAGAAGAGAATAGTCAAATGGGGATTTCTTACAAATCCTGCTTGTTATGTAGTGTTATTATCATATGACTTGAATAGATTTTACTGAACCAGCTGGTATCAGACATTGCTAATGAAATTCTATTGGTACCATTGTTATGATATGCATGTGATTATG ATGGCTGCTAGTCTTCAATTTCGATTCCACTCGTCAATTGGGTCTTTTGACCCTTTATCTACTCTCAAGTCCCCATCTTTTCTCTCTCGATTCCGACCAGTTTCTGTCTCTTTCAGCTCCATCTCTGCTCCAATTTTGCGCTCCGATACCTTCATTTTCAGGTTCGGGTCGAACTGCAACCTGAAAATCCGCCGGAAACGGTACCCAGTTGCGGCGGTTATGTTGTTGCCTGATAATCCGGTGGTCTCCGATGTCTGCGCCACCGCTTTGTCCGGTGGAGTCGCCTTGTCTTTGCTTCGATTGTGGGCGGAAACGGCGAAACGTGGTCTCGATCAGAAATTGAACAGGAAGCTTGTTCATATAAGCATTGGGCTTGCCTTCATGCTCTGCTGGCCTATGTTCAGTTCTGGTCGTCAAGGAGCGATATTGGCGTCTCTAATTCCCGGTGTCAATATAATACGAATGCTAGTCTTGGGACTGGGAATAATGAAAGATGAGGCTACAGTAAAGTCAATGAGCAGATATGGAGACTACAGGGAGCTTTTGAAGGGGCCTTTGTATTATGTTGCAACAATTACATTAGTTTGTATATTCTATTGGAGGACGTCCCCCATTTCAATTGCACTTATATGCAACTTATGTGCTGGAGATGGGTTGGCTGATATCGTTGGAAGACGATTTGGAAGTCAAAAGATCTCTTACAACAAAAACAAGTCACTAGCTGGTAGTGTGGCAATGGCATCTGCTGGTTTTCTTGCATCTGTTGGGTATATGTACTATTTCTCCTCATTTGGGTATGTTGAGAGAAGCAGCAGAATGGTTTTGGGATTCTTGGTTGTGTCTGTTGCCTCAGCATTGGTAGAATCTCTTCCCATAAGCACTGAGATTGATGACAACCTCACTGTTCCACTCACTTCCTTCCTGGTAGGGAGCCTTGTTTTTTAG MAASLQFRFHSSIGSFDPLSTLKSPSFLSRFRPVSVSFSSISAPILRSDTFIFRFGSNCNLKIRRKRYPVAAVMLLPDNPVVSDVCATALSGGVALSLLRLWAETAKRGLDQKLNRKLVHISIGLAFMLCWPMFSSGRQGAILASLIPGVNIIRMLVLGLGIMKDEATVKSMSRYGDYRELLKGPLYYVATITLVCIFYWRTSPISIALICNLCAGDGLADIVGRRFGSQKISYNKNKSLAGSVAMASAGFLASVGYMYYFSSFGYVERSSRMVLGFLVVSVASALVESLPISTEIDDNLTVPLTSFLVGSLVF Homology
BLAST of Lcy10g000580.1 vs. ExPASy Swiss-Prot
Match: Q2N2K0 (Probable phytol kinase 3, chloroplastic OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 5.1e-96 Identity = 196/295 (66.44%), Postives = 230/295 (77.97%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. ExPASy Swiss-Prot
Match: Q67ZM7 (Farnesol kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FOLK PE=1 SV=2) HSP 1 Score: 347.8 bits (891), Expect = 1.3e-94 Identity = 187/301 (62.13%), Postives = 230/301 (76.41%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. ExPASy Swiss-Prot
Match: Q5N9J9 (Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0832000 PE=2 SV=3) HSP 1 Score: 318.9 bits (816), Expect = 6.3e-86 Identity = 163/251 (64.94%), Postives = 201/251 (80.08%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. ExPASy Swiss-Prot
Match: Q2N2K1 (Probable phytol kinase 1, chloroplastic OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 7.3e-50 Identity = 106/227 (46.70%), Postives = 150/227 (66.08%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. ExPASy Swiss-Prot
Match: Q9LZ76 (Phytol kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VTE5 PE=1 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 4.7e-49 Identity = 116/301 (38.54%), Postives = 177/301 (58.80%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. ExPASy TrEMBL
Match: A0A6J1DBM3 (probable phytol kinase 3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018992 PE=3 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 1.3e-142 Identity = 264/314 (84.08%), Postives = 286/314 (91.08%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. ExPASy TrEMBL
Match: A0A6J1G953 (farnesol kinase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452098 PE=3 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 1.4e-141 Identity = 263/293 (89.76%), Postives = 279/293 (95.22%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. ExPASy TrEMBL
Match: A0A6J1HM59 (farnesol kinase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111464846 PE=3 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 2.1e-140 Identity = 271/314 (86.31%), Postives = 285/314 (90.76%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. ExPASy TrEMBL
Match: A0A6J1KHL4 (farnesol kinase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493313 PE=3 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 6.0e-140 Identity = 260/293 (88.74%), Postives = 278/293 (94.88%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. ExPASy TrEMBL
Match: A0A6J1I3Z6 (farnesol kinase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469454 PE=3 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 7.8e-140 Identity = 269/314 (85.67%), Postives = 283/314 (90.13%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. NCBI nr
Match: XP_022150969.1 (probable phytol kinase 3, chloroplastic [Momordica charantia]) HSP 1 Score: 515.8 bits (1327), Expect = 2.7e-142 Identity = 264/314 (84.08%), Postives = 286/314 (91.08%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. NCBI nr
Match: XP_022948407.1 (farnesol kinase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 512.3 bits (1318), Expect = 3.0e-141 Identity = 263/293 (89.76%), Postives = 279/293 (95.22%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. NCBI nr
Match: XP_023523148.1 (farnesol kinase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 511.9 bits (1317), Expect = 3.9e-141 Identity = 262/293 (89.42%), Postives = 279/293 (95.22%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. NCBI nr
Match: XP_022964863.1 (farnesol kinase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 508.4 bits (1308), Expect = 4.3e-140 Identity = 271/314 (86.31%), Postives = 285/314 (90.76%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. NCBI nr
Match: KAG6583348.1 (hypothetical protein SDJN03_19280, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 508.1 bits (1307), Expect = 5.6e-140 Identity = 270/314 (85.99%), Postives = 285/314 (90.76%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. TAIR 10
Match: AT5G58560.1 (Phosphatidate cytidylyltransferase family protein ) HSP 1 Score: 347.8 bits (891), Expect = 9.0e-96 Identity = 187/301 (62.13%), Postives = 230/301 (76.41%), Query Frame = 0
BLAST of Lcy10g000580.1 vs. TAIR 10
Match: AT5G04490.1 (vitamin E pathway gene 5 ) HSP 1 Score: 196.4 bits (498), Expect = 3.3e-50 Identity = 116/301 (38.54%), Postives = 177/301 (58.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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