Lcy09g019390.1 (mRNA) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGCTTGGGCACCTTCTCCTCCATCTACGGGTATTGGAGTTGTCTGTGTTGGATTTTGTTGTAATTTGTGAAAGAAAGTAATTGGTTGAATGCCAAGAGGTTCAAGTTGGTTGATTAATTCATGAGTTTAATGACAATAAATTAAATTCGTAAATTGTATGAACTTGAATAGGTGGTGTCTTTTCGTGTTCTACAACTGCTGTAAGTGCTCATAATTACAGAGTAATCGAATGATCTCTGTATTCTACAGCTGTTGTAAATACACATAAATACACTGTAATTAAATGTAATTACAGAGTATTTATTGTTGTCTTTCTGATTTATCAGAAAGTTACTATTTGAACAACTATAAATAGTAGCTGATTTCCTCATTTCAGAATCATTCCATTTTCGTGGGTTCTCTTATCTTTTCTTCTTTTGAGTTTGGTTTTGTTGAGAGTGAGTATCCAAGGGTTCTGCCAGATCTGTGTAGTTCGAGGTTGTTGTTCTACCGGAGTTAGTCGTTGTATCCTACTGAGACAATCGCTGTAGTCTGCTAGCAACCTGTGTAGAGCGAATAATTGTCTTCAGGACAGCGCTTTGAAAGTGTGCCTCGACTACCAATCATCACATTCTTTTGTTTTACAGGTTCTGTTCGTTTGATGTGGTTGTTGTTGTCAATCGAATCATCTACGACCATTAGAGTGAGTTTGATCTTCTAATATGGTTTAATTATGTTTTCTGTAATTTTTGTTATATACAGTATCTGTAGATATATTTACATTGTATTTGTTTGTAGCTAGTTGCATTGTAATCTGTTTGTTAGTGTGAAACAGTTTCTATATACAGCGTATTTCCAACAGTCTGCAGGAACTCGAGAGGAGAAATTATGGGTGCCTCTTCTTTGTTTTTTGACTTGGATTTCAAAGCCCCTTTTTTTGAGTTAAAAGTTATTTTCGAGGACATTTGTTTGGCAAGATCACTTGGATGTGTAAAGATGATTGTTGAATCTGACTGTGCTCAGGCAATAAGTTTTGTCCCTAAGATATCAAAACCATGGTGTGAGGTGGAGGCCTTGGTGGAAGACATTTGGTCGTTGTTGCCTTTTTTCACTAAAGTTAATTTTTCTTATATTTCTAGGAAGAAAAATAGTGTGGCTAATGGTATTGCTAAGAAAGCTAGATTATTAGGTTTGAATGAGACCTGGGTAATTTCTATCCTAGGTTGGATTGTTTCATTCATCGTTTCTGACCGCTCTTCTTCAGCCCTTGTGGCGTTATAA ATGCTGCTTGGGCACCTTCTCCTCCATCTACGGGTATTGGAGTTGTCTGTGTTGGATTTTGTTGTAATTTGTGAAAGAAAAATCATTCCATTTTCGTGGGTTCTCTTATCTTTTCTTCTTTTGAGTTTGGTTTTGTTGAGAGTGAGTATCCAAGGGTTCTGCCAGATCTGTGTAGTTCGAGGTTCTGTTCGTTTGATGTGGTTGTTGTTGTCAATCGAATCATCTACGACCATTAGATGTGAAACAGTTTCTATATACAGCGTATTTCCAACAGTCTGCAGGAACTCGAGAGGAGAAATTATGGGTGCCTCTTCTTTGTTTTTTGACTTGGATTTCAAAGCCCCTTTTTTTGAGTTAAAAGTTATTTTCGAGGACATTTGTTTGGCAAGATCACTTGGATGTGTAAAGATGATTGTTGAATCTGACTGTGCTCAGGCAATAAGTTTTGTCCCTAAGATATCAAAACCATGGTGTGAGGTGGAGGCCTTGGTGGAAGACATTTGGTCGTTGTTGCCTTTTTTCACTAAAGTTAATTTTTCTTATATTTCTAGGAAGAAAAATAGTGTGGCTAATGGTATTGCTAAGAAAGCTAGATTATTAGGTTTGAATGAGACCTGGGTAATTTCTATCCTAGGTTGGATTGTTTCATTCATCGTTTCTGACCGCTCTTCTTCAGCCCTTGTGGCGTTATAA ATGCTGCTTGGGCACCTTCTCCTCCATCTACGGGTATTGGAGTTGTCTGTGTTGGATTTTGTTGTAATTTGTGAAAGAAAAATCATTCCATTTTCGTGGGTTCTCTTATCTTTTCTTCTTTTGAGTTTGGTTTTGTTGAGAGTGAGTATCCAAGGGTTCTGCCAGATCTGTGTAGTTCGAGGTTCTGTTCGTTTGATGTGGTTGTTGTTGTCAATCGAATCATCTACGACCATTAGATGTGAAACAGTTTCTATATACAGCGTATTTCCAACAGTCTGCAGGAACTCGAGAGGAGAAATTATGGGTGCCTCTTCTTTGTTTTTTGACTTGGATTTCAAAGCCCCTTTTTTTGAGTTAAAAGTTATTTTCGAGGACATTTGTTTGGCAAGATCACTTGGATGTGTAAAGATGATTGTTGAATCTGACTGTGCTCAGGCAATAAGTTTTGTCCCTAAGATATCAAAACCATGGTGTGAGGTGGAGGCCTTGGTGGAAGACATTTGGTCGTTGTTGCCTTTTTTCACTAAAGTTAATTTTTCTTATATTTCTAGGAAGAAAAATAGTGTGGCTAATGGTATTGCTAAGAAAGCTAGATTATTAGGTTTGAATGAGACCTGGGTAATTTCTATCCTAGGTTGGATTGTTTCATTCATCGTTTCTGACCGCTCTTCTTCAGCCCTTGTGGCGTTATAA MLLGHLLLHLRVLELSVLDFVVICERKIIPFSWVLLSFLLLSLVLLRVSIQGFCQICVVRGSVRLMWLLLSIESSTTIRCETVSIYSVFPTVCRNSRGEIMGASSLFFDLDFKAPFFELKVIFEDICLARSLGCVKMIVESDCAQAISFVPKISKPWCEVEALVEDIWSLLPFFTKVNFSYISRKKNSVANGIAKKARLLGLNETWVISILGWIVSFIVSDRSSSALVAL Homology
BLAST of Lcy09g019390.1 vs. ExPASy TrEMBL
Match: A0A0J8BAU9 (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_7g179330 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.9e-05 Identity = 36/130 (27.69%), Postives = 66/130 (50.77%), Query Frame = 0
BLAST of Lcy09g019390.1 vs. ExPASy TrEMBL
Match: M7Z309 (Bidirectional sugar transporter SWEET14 OS=Triticum urartu OX=4572 GN=TRIUR3_00534 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 9.2e-05 Identity = 40/132 (30.30%), Postives = 64/132 (48.48%), Query Frame = 0
BLAST of Lcy09g019390.1 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.6e-04 Identity = 32/113 (28.32%), Postives = 59/113 (52.21%), Query Frame = 0
BLAST of Lcy09g019390.1 vs. ExPASy TrEMBL
Match: M7Z366 (Ketohexokinase OS=Triticum urartu OX=4572 GN=TRIUR3_11649 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.7e-04 Identity = 47/186 (25.27%), Postives = 86/186 (46.24%), Query Frame = 0
BLAST of Lcy09g019390.1 vs. ExPASy TrEMBL
Match: A0A1R3HC77 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_20291 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.7e-04 Identity = 34/115 (29.57%), Postives = 57/115 (49.57%), Query Frame = 0
BLAST of Lcy09g019390.1 vs. NCBI nr
Match: XP_038902513.1 (uncharacterized protein LOC120089172 [Benincasa hispida]) HSP 1 Score: 74.3 bits (181), Expect = 1.5e-09 Identity = 39/123 (31.71%), Postives = 65/123 (52.85%), Query Frame = 0
BLAST of Lcy09g019390.1 vs. NCBI nr
Match: XP_010682311.1 (PREDICTED: uncharacterized protein LOC104897185 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 68.6 bits (166), Expect = 8.3e-08 Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of Lcy09g019390.1 vs. NCBI nr
Match: XP_021748542.1 (uncharacterized protein LOC110714345 [Chenopodium quinoa]) HSP 1 Score: 64.3 bits (155), Expect = 1.6e-06 Identity = 38/132 (28.79%), Postives = 66/132 (50.00%), Query Frame = 0
BLAST of Lcy09g019390.1 vs. NCBI nr
Match: XP_010686140.1 (PREDICTED: uncharacterized protein LOC104900422 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 63.2 bits (152), Expect = 3.5e-06 Identity = 29/103 (28.16%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of Lcy09g019390.1 vs. NCBI nr
Match: KAF2906274.1 (hypothetical protein DAI22_12g007450 [Oryza sativa Japonica Group]) HSP 1 Score: 61.2 bits (147), Expect = 1.3e-05 Identity = 36/131 (27.48%), Postives = 65/131 (49.62%), Query Frame = 0
BLAST of Lcy09g019390.1 vs. TAIR 10
Match: AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 42.0 bits (97), Expect = 7.7e-04 Identity = 26/80 (32.50%), Postives = 44/80 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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