Lcy09g014270.1 (mRNA) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGTATGCAGGGAGATCCCTACATACCGGTATGCAGCCAAGTTTTTTCCTATTTATATATAGTTAAGGAAAAAACTTGGCTGCATACCGGTGGGTAGTGGGTAGGGATCTCCCTGCATACCCCATTAAAATCTTGACAACTAAGAAAGAAGAAAGTAAAAAGTGATAACTTTTTTTTGTATCTCTCTTAGTTGTCAAGATTTTAATGGTGGTATGTAGGGAGATTCCTACCCACCGGTATGTAGCCAAGTTTTTTCCTATAGTTAATTGATGTGGAGAAGGATAAAACAACCATGGAATATGGAAAGAGTGTAATAAAATATATAGAATGATCATTTATATAATTTCTTTCGAAATGTAGTCGTTTCTTAATAAAGAATCACGTAGTTGAATATTAATAGAGGGAGTAAATATTATAATATAATATATTGAAATTTTTTCTCGGGGATTGCCTACTGCCGCAATCGAGTGATTGGGAGGAGCGCTGTGTATGGAGTCCGCCTCCTGCTAGGAAGCTGAAACTTAATGTTGATGCTTCTGTCAGGCCTGATACAGGGGAAGCGGGGGATGGTTGTGTGCTGCGTGGGGCTGATGGTGAGGTATTTATGGCCGCCTGTTTGGAACTACAGAGGTGTTGGAGCGTGGATTTGGCTGAGGGATGGACTGTGTATAAAGAGGTCCAACTTGCTCGGCAGTTGGGGTTTGCGGAGTTTGTGGTAGAGACTGACTCGCTGAGGTTGGTCAAAATCCTCCATGGCGATCTGCATGATGTTTCAGAAGTGGGGCTGCTAATGGATGACATTCGAGGGATTCTCCACCCTTGGGACAACGGTAAGGTTTTGTTTACATTACGCCAGGGAAACAAGGTGGCGCATGTTCTGGGTAGTTTGGCCTTTTCATATGTTGACCGTGTTTGGCTTGAAGAGTGGCCCAGCGAAATCTCGGATGTCCTGAGGGGTGATGTTGTTTCAGCTGCGTGA ATGGTGGTATGCAGGGAGATCCCTACATACCGGCCTGATACAGGGGAAGCGGGGGATGGTTGTGTGCTGCGTGGGGCTGATGGTGAGGTATTTATGGCCGCCTGTTTGGAACTACAGAGGTGTTGGAGCGTGGATTTGGCTGAGGGATGGACTGTGTATAAAGAGGTCCAACTTGCTCGGCAGTTGGGGTTTGCGGAGTTTGTGGTAGAGACTGACTCGCTGAGGTTGGTCAAAATCCTCCATGGCGATCTGCATGATGTTTCAGAAGTGGGGCTGCTAATGGATGACATTCGAGGGATTCTCCACCCTTGGGACAACGGTAAGGTTTTGTTTACATTACGCCAGGGAAACAAGGTGGCGCATGTTCTGGGTAGTTTGGCCTTTTCATATGTTGACCGTGTTTGGCTTGAAGAGTGGCCCAGCGAAATCTCGGATGTCCTGAGGGGTGATGTTGTTTCAGCTGCGTGA ATGGTGGTATGCAGGGAGATCCCTACATACCGGCCTGATACAGGGGAAGCGGGGGATGGTTGTGTGCTGCGTGGGGCTGATGGTGAGGTATTTATGGCCGCCTGTTTGGAACTACAGAGGTGTTGGAGCGTGGATTTGGCTGAGGGATGGACTGTGTATAAAGAGGTCCAACTTGCTCGGCAGTTGGGGTTTGCGGAGTTTGTGGTAGAGACTGACTCGCTGAGGTTGGTCAAAATCCTCCATGGCGATCTGCATGATGTTTCAGAAGTGGGGCTGCTAATGGATGACATTCGAGGGATTCTCCACCCTTGGGACAACGGTAAGGTTTTGTTTACATTACGCCAGGGAAACAAGGTGGCGCATGTTCTGGGTAGTTTGGCCTTTTCATATGTTGACCGTGTTTGGCTTGAAGAGTGGCCCAGCGAAATCTCGGATGTCCTGAGGGGTGATGTTGTTTCAGCTGCGTGA MVVCREIPTYRPDTGEAGDGCVLRGADGEVFMAACLELQRCWSVDLAEGWTVYKEVQLARQLGFAEFVVETDSLRLVKILHGDLHDVSEVGLLMDDIRGILHPWDNGKVLFTLRQGNKVAHVLGSLAFSYVDRVWLEEWPSEISDVLRGDVVSAA Homology
BLAST of Lcy09g014270.1 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.9e-18 Identity = 58/143 (40.56%), Postives = 81/143 (56.64%), Query Frame = 0
BLAST of Lcy09g014270.1 vs. ExPASy TrEMBL
Match: A0A5C7ITL2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001058 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.4e-12 Identity = 46/141 (32.62%), Postives = 73/141 (51.77%), Query Frame = 0
BLAST of Lcy09g014270.1 vs. ExPASy TrEMBL
Match: A0A6P9ETQ1 (uncharacterized protein LOC108983473 OS=Juglans regia OX=51240 GN=LOC108983473 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 9.0e-12 Identity = 42/138 (30.43%), Postives = 74/138 (53.62%), Query Frame = 0
BLAST of Lcy09g014270.1 vs. ExPASy TrEMBL
Match: A0A803MUM1 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.2e-11 Identity = 47/143 (32.87%), Postives = 74/143 (51.75%), Query Frame = 0
BLAST of Lcy09g014270.1 vs. ExPASy TrEMBL
Match: A0A1R3HHY9 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_19197 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.5e-11 Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 0
BLAST of Lcy09g014270.1 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia]) HSP 1 Score: 101.7 bits (252), Expect = 5.9e-18 Identity = 58/143 (40.56%), Postives = 81/143 (56.64%), Query Frame = 0
BLAST of Lcy09g014270.1 vs. NCBI nr
Match: XP_030970599.1 (uncharacterized protein LOC115990979 [Quercus lobata]) HSP 1 Score: 88.2 bits (217), Expect = 6.8e-14 Identity = 53/142 (37.32%), Postives = 76/142 (53.52%), Query Frame = 0
BLAST of Lcy09g014270.1 vs. NCBI nr
Match: XP_021716820.1 (uncharacterized protein LOC110684687 [Chenopodium quinoa]) HSP 1 Score: 87.4 bits (215), Expect = 1.2e-13 Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 0
BLAST of Lcy09g014270.1 vs. NCBI nr
Match: KAF7802400.1 (uncharacterized protein G2W53_041511 [Senna tora]) HSP 1 Score: 85.5 bits (210), Expect = 4.4e-13 Identity = 43/146 (29.45%), Postives = 80/146 (54.79%), Query Frame = 0
BLAST of Lcy09g014270.1 vs. NCBI nr
Match: XP_042964529.1 (uncharacterized protein LOC122298728 [Carya illinoinensis]) HSP 1 Score: 84.0 bits (206), Expect = 1.3e-12 Identity = 46/139 (33.09%), Postives = 74/139 (53.24%), Query Frame = 0
BLAST of Lcy09g014270.1 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 51.2 bits (121), Expect = 8.6e-07 Identity = 38/133 (28.57%), Postives = 61/133 (45.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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