Lcy09g003170.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy09g003170.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	transcription factor MYB59-like
Location	Chr09: 2700648 .. 2702751 (-)
Sequence length	1050
RNA-Seq Expression	Lcy09g003170.1
Synteny	Lcy09g003170.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGATTAGAACTCCTATAGCTTAGGGGAAGACAAAATGGAAAGCCATCACCAATAAGATCTGAGTTAAAGATTTGAGTGGTGAATGAGATCACAAAAAAATGATAGAAAATGAAAGGCAAAATTAGTGGAAGGGACTGAATGAATTGGAAATATAAATAGAAGTTAAATGCAACCATTGATTATTCCACAGAGAGCTTTGTTGTGCATGTGTTGCATTGGTCAGTTATTAGAAATGGATTCACAAGAAAAAGAATGGAGGAAGGGACCTTGGACTCCTGAGGAAGACAAGTTGCTGTCTGAATATGTGAAGGTGCATGGAGAAGGAAGATGGACTTCTGTTGCCACTGGTTCAGGTAAAAGTTCTAGCTATCTAGCTTTTGAACCAAATGTTTTCTTTGAAAATTTAGGAGATTTGTTTGGTTCATGGGTCAAGGGGAATTTGGCTTTGTACGATCGGATTTATACTTCGGTTTTTTTAGTTCAGCAATATGTGAGATGGAGATTTGAACCTTCTCCAATGACCATAAAGTTATAATATAATATCTTAATTACCAATTGAATTTGTGCTCAGGTTGGTTCAAATGGCCAGGTCGAGGAAGTTAGTTGGATTTTTATGTGAATATAAGGTTTCCTAAAGCTTGTTAGATTTATGCAATTTATGGTTTTCTCGTAATTTTATAAAGTTTGGAAAGTGAAAATAATAATAAGATCGATGTCAAACGTATACTCCCAGTTTTGTAGTTCTAAACTGTACAAACTTAACTCTTGCAAAAGCTAAAAACACCACCTCTTTTTAAGGTGTAGGAGAATCAATACCTAAATTAGGAGATTAAAGTTAACATGTAAATTAGTTAATTAATATCATGGTTATAATTTGAATACGTATGTTTTTTTCTTTGTAAGCTCAACAAAAGAGAGATATAGCATGTCAACTTTTAAACCGAAGGAAAATAATAGGTGTCACATATACATCTACTAAACTATGCTTGATTTACATATATCTTAGGATCATAATATGACTTTAAAAAAAAAAATTAGGATAGTATGCTAAATCACATCATCAAGCTGGAAAGGTAAATATTATTCTTTTAAATGGTAACTAATTAAGTTGGGTTATTTTTTATAGGTTTGAATCGAACTGGAAAAAGTTGTAGATTGAGATGGGTGAATTATCTTAGACCCGGGCTTAAGAGAGGTCATCTCACTCCTCAAGAGGAAGGCATTATCATAGAACTTCATGCTCTTTGGGGCAACAAGTAATATTCTCTCTCAACATCTCTTTTTTCTAGCATATTATTAGGTACTTTTGGTGGAATAAGACTCCCTCTAACCGTCATATATATATATATATATCTTTAAATTTGTTTGTCCCTAAATAACCATGGGATATACAAAGTCGATGTACTTTTACAATTTATCTCTTACATCAAACAGTGCAGAACTGTCAGTCTCTCATTGTATCGAGAACATCTAATAATTTCTCCTTTTTTACCCATCTCTTTTTTAACCAATGGTGAGATATTTTAAATTTATACAGATGGTCAACCATAGCAAGATACTTACCGGGAAGAACAGACAACGAAATAAAAAACTACTGGAGAACTCATTTCAAGAAGATGAAGCCAAAGAGAAAAGCTCAAATAATTGCTCCAAAACCAGACAACAAAACATCACCACCAATCAACTATGAACAAGCCAAAGCTAAGGAGGAGAAAGAGATGATGAAGTCGTGTGAGAGAGATGACTTAGGAATGGTTTTTACACAGCCAGCTGCAGCAGCCATGGCAGATGATGATCAGAGCTACTTGTCGATGGTGTATCAAGATTTCGCAACTTGGGCGGCGGCGGCGGCGGAAGAGAGCTGGTTGTGGGGTGGCCTGTGGGAAGTTGAAGAGACTGATGTGATTAACTATTGGGAGAATGTTGAATTATAAGTCTCTCATTTTTTTTTTAAGCTTGTAAATTTTATTTTTGGCTAAATTATAAAAAAAATACCCTTGAGGTTTATTTAGAAAATGCTCTTGAATTTGAAAAGTTTAAAAAATACCTCTAATTTTTTAAAAATGTTTAAAAAATACCTTTGCCGTTATTATTTTTTTTT

mRNA sequence

TTTGGATTAGAACTCCTATAGCTTAGGGGAAGACAAAATGGAAAGCCATCACCAATAAGATCTGAGTTAAAGATTTGAGTGGTGAATGAGATCACAAAAAAATGATAGAAAATGAAAGGCAAAATTAGTGGAAGGGACTGAATGAATTGGAAATATAAATAGAAGTTAAATGCAACCATTGATTATTCCACAGAGAGCTTTGTTGTGCATGTGTTGCATTGGTCAGTTATTAGAAATGGATTCACAAGAAAAAGAATGGAGGAAGGGACCTTGGACTCCTGAGGAAGACAAGTTGCTGTCTGAATATGTGAAGGTGCATGGAGAAGGAAGATGGACTTCTGTTGCCACTGGTTCAGGTTTGAATCGAACTGGAAAAAGTTGTAGATTGAGATGGGTGAATTATCTTAGACCCGGGCTTAAGAGAGGTCATCTCACTCCTCAAGAGGAAGGCATTATCATAGAACTTCATGCTCTTTGGGGCAACAAATGGTCAACCATAGCAAGATACTTACCGGGAAGAACAGACAACGAAATAAAAAACTACTGGAGAACTCATTTCAAGAAGATGAAGCCAAAGAGAAAAGCTCAAATAATTGCTCCAAAACCAGACAACAAAACATCACCACCAATCAACTATGAACAAGCCAAAGCTAAGGAGGAGAAAGAGATGATGAAGTCGTGTGAGAGAGATGACTTAGGAATGGTTTTTACACAGCCAGCTGCAGCAGCCATGGCAGATGATGATCAGAGCTACTTGTCGATGGTGTATCAAGATTTCGCAACTTGGGCGGCGGCGGCGGCGGAAGAGAGCTGGTTGTGGGGTGGCCTGTGGGAAGTTGAAGAGACTGATGTGATTAACTATTGGGAGAATGTTGAATTATAAGTCTCTCATTTTTTTTTTAAGCTTGTAAATTTTATTTTTGGCTAAATTATAAAAAAAATACCCTTGAGGTTTATTTAGAAAATGCTCTTGAATTTGAAAAGTTTAAAAAATACCTCTAATTTTTTAAAAATGTTTAAAAAATACCTTTGCCGTTATTATTTTTTTTT

Coding sequence (CDS)

ATGCAACCATTGATTATTCCACAGAGAGCTTTGTTGTGCATGTGTTGCATTGGTCAGTTATTAGAAATGGATTCACAAGAAAAAGAATGGAGGAAGGGACCTTGGACTCCTGAGGAAGACAAGTTGCTGTCTGAATATGTGAAGGTGCATGGAGAAGGAAGATGGACTTCTGTTGCCACTGGTTCAGGTTTGAATCGAACTGGAAAAAGTTGTAGATTGAGATGGGTGAATTATCTTAGACCCGGGCTTAAGAGAGGTCATCTCACTCCTCAAGAGGAAGGCATTATCATAGAACTTCATGCTCTTTGGGGCAACAAATGGTCAACCATAGCAAGATACTTACCGGGAAGAACAGACAACGAAATAAAAAACTACTGGAGAACTCATTTCAAGAAGATGAAGCCAAAGAGAAAAGCTCAAATAATTGCTCCAAAACCAGACAACAAAACATCACCACCAATCAACTATGAACAAGCCAAAGCTAAGGAGGAGAAAGAGATGATGAAGTCGTGTGAGAGAGATGACTTAGGAATGGTTTTTACACAGCCAGCTGCAGCAGCCATGGCAGATGATGATCAGAGCTACTTGTCGATGGTGTATCAAGATTTCGCAACTTGGGCGGCGGCGGCGGCGGAAGAGAGCTGGTTGTGGGGTGGCCTGTGGGAAGTTGAAGAGACTGATGTGATTAACTATTGGGAGAATGTTGAATTATAA

Protein sequence

MQPLIIPQRALLCMCCIGQLLEMDSQEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQIIAPKPDNKTSPPINYEQAKAKEEKEMMKSCERDDLGMVFTQPAAAAMADDDQSYLSMVYQDFATWAAAAAEESWLWGGLWEVEETDVINYWENVEL

Homology

[Close]

BLAST of Lcy09g003170.1 vs. ExPASy Swiss-Prot
Match: Q9LX82 (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-41
Identity = 76/116 (65.52%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 26  QEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKR 85
           QE+  RKGPWT +ED LL  +V + G+ RW  +A  SGLNRTGKSCRLRWVNYL PGLKR
Sbjct: 3   QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKR 62

Query: 86  GHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQI 142
           G +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K  +
Sbjct: 63  GKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPV 118

[Close]

BLAST of Lcy09g003170.1 vs. ExPASy Swiss-Prot
Match: Q4JL84 (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 2.7e-41
Identity = 94/199 (47.24%), Postives = 120/199 (60.30%), Query Frame = 0


Query: 27  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKRG 86
           ++E+RKGPWT +ED LL  +V + G+ RW  VA  SGLNRTGKSCRLRWVNYL PGLKRG
Sbjct: 5   QEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRG 64

Query: 87  HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQIIAPKP 146
            +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K K + K + ++P  
Sbjct: 65  KMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRK-KAQEKKRPMSPTS 124

Query: 147 DN----KTSPPINYEQAKAKEEKEMMKSCE-----RDDLGMVFTQPAAAAMADDDQSYLS 206
            +     +S      Q       +M + CE      DD+     Q  A  +     +Y S
Sbjct: 125 SSSNCCSSSMTTTTSQDTGGSNGKMNQECEDGYYSMDDIWREIDQSGANVIKPVKDNYYS 184

Query: 207 --MVYQDFATWAAAAAEES 215
               Y +F   A+   E S
Sbjct: 185 EQSCYLNFPPLASPTWESS 202

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BLAST of Lcy09g003170.1 vs. ExPASy Swiss-Prot
Match: Q9C9G7 (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.9e-41
Identity = 71/109 (65.14%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 24  DSQEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGL 83
           +S+++E R+GPWT EED LL+ Y+  +GEGRW  VA  +GL RTGKSCRLRW+NYL+P +
Sbjct: 13  ESEDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDI 72

Query: 84  KRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK 133
           +RG+LTPQE+ +I+ELH+ WGN+WS IA+YLPGRTDNEIKNYWRT  +K
Sbjct: 73  RRGNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQK 121

[Close]

BLAST of Lcy09g003170.1 vs. ExPASy Swiss-Prot
Match: E0CJS3 (MYB-like transcription factor EOBII OS=Petunia hybrida OX=4102 GN=EOBII PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40
Identity = 71/109 (65.14%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 24  DSQEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGL 83
           +SQ+ E RKGPWT EED +L  Y+  HGEG W S+A  +GL RTGKSCRLRW+NYLRP +
Sbjct: 7   NSQDAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDV 66

Query: 84  KRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK 133
           +RG++TP+E+ +I+ELHA WGN+WS IA++LPGRTDNEIKNYWRT  +K
Sbjct: 67  RRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQK 115

[Close]

BLAST of Lcy09g003170.1 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40
Identity = 71/111 (63.96%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 31  RKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKRGHLTP 90
           R+GPWT EED LL  Y+  HGEGRW S+A  +GL RTGKSCRLRW+NYLRP L+RG++TP
Sbjct: 21  RRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDLRRGNITP 80

Query: 91  QEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQI 142
           QE+ +I+ELH+ WGN+WS IA++LPGRTDNEIKNYWRT  +K   + K  +
Sbjct: 81  QEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDV 131

[Close]

BLAST of Lcy09g003170.1 vs. ExPASy TrEMBL
Match: A0A6J1GRA0 (transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111456806 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.4e-95
Identity = 174/203 (85.71%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 23  MDSQEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPG 82
           MD++EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGS LNRTGKSCRLRWVNYLRPG
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 83  LKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQII 142
           LKRGHLTP EEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+AQ++
Sbjct: 61  LKRGHLTPLEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

Query: 143 APKPDNKTSPPINYEQAKAKEEKEMMKSCER--DDLGMVFTQPAAAAMADDDQSYLSMVY 202
            PKPDNKTSPPI++EQ   +EEK+MMK C R  D+LGMVFT+PAA A    DQSYLSMVY
Sbjct: 121 VPKPDNKTSPPISFEQ--DREEKDMMKPCGRDNDELGMVFTEPAAMAA---DQSYLSMVY 180

Query: 203 QDFATW-AAAAAEESWLWGGLWE 223
           +DFATW AAAAAEES+LWGGLWE
Sbjct: 181 EDFATWAAAAAAEESYLWGGLWE 198

[Close]

BLAST of Lcy09g003170.1 vs. ExPASy TrEMBL
Match: A0A6J1JQZ1 (transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111487542 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.9e-95
Identity = 173/203 (85.22%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 23  MDSQEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPG 82
           MD++EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGS LNRTGKSCRLRWVNYLRPG
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 83  LKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQII 142
           LKRGHLTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+AQ++
Sbjct: 61  LKRGHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

Query: 143 APKPDNKTSPPINYEQAKAKEEKEMMKSCERD--DLGMVFTQPAAAAMADDDQSYLSMVY 202
            PKPDNKTS PI++EQ   +EEK+MMK CERD  +LGMVFT+PAA A    DQSYLSMVY
Sbjct: 121 VPKPDNKTSAPISFEQ--DREEKDMMKLCERDNAELGMVFTEPAAMAA---DQSYLSMVY 180

Query: 203 QDFATW-AAAAAEESWLWGGLWE 223
           +DFATW AAAAAEES+LWGGLWE
Sbjct: 181 EDFATWAAAAAAEESYLWGGLWE 198

[Close]

BLAST of Lcy09g003170.1 vs. ExPASy TrEMBL
Match: A0A5A7T8Y5 (Transcription factor MYB59-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002300 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.9e-80
Identity = 153/214 (71.50%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 26  QEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKR 85
           +E+EWRKGPWT EEDKLL EYVKVHGEGRW+SVA GSGLNRTGKSCRLRWVNYLRPGLKR
Sbjct: 5   EEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLRPGLKR 64

Query: 86  GHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQIIAPK 145
           GHLTPQEEGIIIELHALWGNKWSTIA+YLPGRTDNEIKNYWRTHFKKMKP+RK+QII PK
Sbjct: 65  GHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPRRKSQIIVPK 124

Query: 146 PDNKTSPPINYEQAKAKEEKEMMKSCERDDLGMVFTQPAAAAMADDDQS-YLSMVYQDFA 205
            DNKT PPI+  +   +   E+MK  + DDLGMVFT P   AM D +Q+ YLS VYQD  
Sbjct: 125 TDNKTLPPISRCE---EHVMELMKPYDSDDLGMVFTDP--TAMEDHEQTYYLSKVYQDLT 184

Query: 206 TW---------AAAAAEESWLWGGLWEVEETDVI 230
            W           A  EE  LW GLWEV E D++
Sbjct: 185 NWTVESVAVAAVVAEQEEESLWDGLWEVPENDIM 213

[Close]

BLAST of Lcy09g003170.1 vs. ExPASy TrEMBL
Match: A0A1S3CAT1 (transcription factor MYB59-like OS=Cucumis melo OX=3656 GN=LOC103498747 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 7.6e-79
Identity = 153/216 (70.83%), Postives = 168/216 (77.78%), Query Frame = 0


Query: 26  QEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKR 85
           +E+EWRKGPWT EEDKLL EYVKVHGEGRW+SVA GSGLNRTGKSCRLRWVNYL+PGLKR
Sbjct: 5   EEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLKPGLKR 64

Query: 86  GHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPK--RKAQIIA 145
           GHLTPQEEGIIIELHALWGNKWSTIA+YLPGRTDNEIKNYWRTHFKKMKPK  RK+QII 
Sbjct: 65  GHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPKPRRKSQIIV 124

Query: 146 PKPDNKTSPPINYEQAKAKEEKEMMKSCERDDLGMVFTQPAAAAMADDDQS-YLSMVYQD 205
           PK DNKT PPI+  + +     E+MK  + DDLGMVFT P   AM D +Q+ YLS VYQD
Sbjct: 125 PKTDNKTLPPISRCEERV---MELMKPYDSDDLGMVFTDP--TAMEDHEQTYYLSKVYQD 184

Query: 206 FATW---------AAAAAEESWLWGGLWEVEETDVI 230
              W           A  EE  LW GLWEV E D++
Sbjct: 185 LTNWTVESGAVAAVVAEQEEESLWDGLWEVPENDIM 215

[Close]

BLAST of Lcy09g003170.1 vs. ExPASy TrEMBL
Match: A0A0A0KSK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G641610 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.6e-73
Identity = 147/203 (72.41%), Postives = 161/203 (79.31%), Query Frame = 0


Query: 26  QEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKR 85
           +E+EWRKGPWT +EDKLL EYVKVHGEGRW SVA GSGLNRTGKSCRLRWVNYLRPGLKR
Sbjct: 33  EEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRPGLKR 92

Query: 86  GHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQIIAPK 145
            HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK++I+  K
Sbjct: 93  CHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMVGK 152

Query: 146 PDNKTSPPINYEQAKAKEEKEMMKSCERD--DLGMVFTQPAAAAMADDDQS-YLSMVYQD 205
            DNKT PP+   +   +   E+MK  + D  DL MVFT+P   AM D +Q+ YLSMVYQD
Sbjct: 153 TDNKTMPPVTRCE---EHVMELMKPYDSDNNDLSMVFTEP--TAMEDHEQTYYLSMVYQD 212

Query: 206 FATWAAAAAEES-WLW--GGLWE 223
              WAA   EES W W  GG  E
Sbjct: 213 LTNWAAEKKEESLWEWPLGGFRE 230

[Close]

BLAST of Lcy09g003170.1 vs. NCBI nr
Match: XP_022954581.1 (transcription factor MYB59-like [Cucurbita moschata])

HSP 1 Score: 357.5 bits (916), Expect = 9.2e-95
Identity = 174/203 (85.71%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 23  MDSQEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPG 82
           MD++EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGS LNRTGKSCRLRWVNYLRPG
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 83  LKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQII 142
           LKRGHLTP EEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+AQ++
Sbjct: 61  LKRGHLTPLEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

Query: 143 APKPDNKTSPPINYEQAKAKEEKEMMKSCER--DDLGMVFTQPAAAAMADDDQSYLSMVY 202
            PKPDNKTSPPI++EQ   +EEK+MMK C R  D+LGMVFT+PAA A    DQSYLSMVY
Sbjct: 121 VPKPDNKTSPPISFEQ--DREEKDMMKPCGRDNDELGMVFTEPAAMAA---DQSYLSMVY 180

Query: 203 QDFATW-AAAAAEESWLWGGLWE 223
           +DFATW AAAAAEES+LWGGLWE
Sbjct: 181 EDFATWAAAAAAEESYLWGGLWE 198

[Close]

BLAST of Lcy09g003170.1 vs. NCBI nr
Match: KAG6602540.1 (Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 356.7 bits (914), Expect = 1.6e-94
Identity = 174/203 (85.71%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 23  MDSQEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPG 82
           MD++EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGS LNRTGKSCRLRWVNYLRPG
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 83  LKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQII 142
           LKRGHLTP EEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+AQ++
Sbjct: 61  LKRGHLTPLEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

Query: 143 APKPDNKTSPPINYEQAKAKEEKEMMKSCER--DDLGMVFTQPAAAAMADDDQSYLSMVY 202
            PKPD KTSPPI++EQ   +EEK+MMK CER  D+LGMVFT+PAA A    DQSYLSMVY
Sbjct: 121 VPKPDIKTSPPISFEQ--DREEKDMMKPCERDNDELGMVFTEPAAMAA---DQSYLSMVY 180

Query: 203 QDFATW-AAAAAEESWLWGGLWE 223
           +DFATW AAAAAEES+LWGGLWE
Sbjct: 181 EDFATWAAAAAAEESYLWGGLWE 198

[Close]

BLAST of Lcy09g003170.1 vs. NCBI nr
Match: XP_022990755.1 (transcription factor MYB59-like [Cucurbita maxima])

HSP 1 Score: 356.3 bits (913), Expect = 2.0e-94
Identity = 173/203 (85.22%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 23  MDSQEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPG 82
           MD++EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGS LNRTGKSCRLRWVNYLRPG
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 83  LKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQII 142
           LKRGHLTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+AQ++
Sbjct: 61  LKRGHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

Query: 143 APKPDNKTSPPINYEQAKAKEEKEMMKSCERD--DLGMVFTQPAAAAMADDDQSYLSMVY 202
            PKPDNKTS PI++EQ   +EEK+MMK CERD  +LGMVFT+PAA A    DQSYLSMVY
Sbjct: 121 VPKPDNKTSAPISFEQ--DREEKDMMKLCERDNAELGMVFTEPAAMAA---DQSYLSMVY 180

Query: 203 QDFATW-AAAAAEESWLWGGLWE 223
           +DFATW AAAAAEES+LWGGLWE
Sbjct: 181 EDFATWAAAAAAEESYLWGGLWE 198

[Close]

BLAST of Lcy09g003170.1 vs. NCBI nr
Match: XP_023554284.1 (transcription factor MYB59-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.4 bits (908), Expect = 7.8e-94
Identity = 173/203 (85.22%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 23  MDSQEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPG 82
           MD++EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGS LNRTGKSCRLRWVNYLRPG
Sbjct: 1   MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 60

Query: 83  LKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQII 142
           LKRGHLTP EEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+AQ++
Sbjct: 61  LKRGHLTPLEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMV 120

Query: 143 APKPDNKTSPPINYEQAKAKEEKEMMKSCER--DDLGMVFTQPAAAAMADDDQSYLSMVY 202
            P+PDNKTSPPI++EQ   +EEK+MMK  ER  D+LGMVFT+PAA A    DQSYLSMVY
Sbjct: 121 VPQPDNKTSPPISFEQ--DREEKDMMKPYERDNDELGMVFTEPAAMAA---DQSYLSMVY 180

Query: 203 QDFATW-AAAAAEESWLWGGLWE 223
           +DFATW AAAAAEES+LWGGLWE
Sbjct: 181 EDFATWAAAAAAEESYLWGGLWE 198

[Close]

BLAST of Lcy09g003170.1 vs. NCBI nr
Match: XP_038889193.1 (transcription factor MYB59-like [Benincasa hispida])

HSP 1 Score: 317.8 bits (813), Expect = 8.1e-83
Identity = 161/206 (78.16%), Postives = 172/206 (83.50%), Query Frame = 0


Query: 23  MDSQE-KEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRP 82
           MD +E +EWRKGPWT EEDKLL EYVKVHGEGRWTSVA GSGLNRTGKSCRLRWVNYLRP
Sbjct: 1   MDGKEVQEWRKGPWTVEEDKLLCEYVKVHGEGRWTSVAIGSGLNRTGKSCRLRWVNYLRP 60

Query: 83  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQI 142
           GLKRGH TPQEEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKA+I
Sbjct: 61  GLKRGHFTPQEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAEI 120

Query: 143 IAPKPD-NKTSPPINYEQAKAKEEKEMMKSCERD-DLGMVFTQPAAAAMADDDQSYLSMV 202
           IAPK D NKT PPI   +   +  KE+MK  ERD DL M+FT+PAA    +D+QSYLSMV
Sbjct: 121 IAPKTDNNKTLPPITTSE---EHVKELMKPYERDNDLAMLFTEPAA---MEDEQSYLSMV 180

Query: 203 YQDFATWAAAAAEESWLWGGLWEVEE 226
           YQDF   A A  EE  LWGGLWEV E
Sbjct: 181 YQDFVIVADAVEEEESLWGGLWEVSE 200

[Close]

BLAST of Lcy09g003170.1 vs. TAIR 10
Match: AT3G30210.1 (myb domain protein 121 )

HSP 1 Score: 211.8 bits (538), Expect = 5.8e-55
Identity = 109/216 (50.46%), Postives = 145/216 (67.13%), Query Frame = 0


Query: 20  LLEMDSQEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYL 79
           + +   Q++  RKGPWT EEDKLL+EYV  HGEGRW++VA  +GLNR+GKSCRLRWVNYL
Sbjct: 17  IYQQQHQQQGCRKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYL 76

Query: 80  RPGLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKA 139
           RPGLKRG +TPQEEGII+ELH+LWGNKWSTIARYLPGRTDNEIKNYWRTH+KK +     
Sbjct: 77  RPGLKRGQITPQEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYWRTHYKKNQKSSSK 136

Query: 140 QIIAPKPDNKTSPPINYE-QAKAKEEKEMMKSCERDDLGMVFTQPAAAAM-----ADDDQ 199
           Q    K  ++    ++ + Q +A+ E    +   +D + +      A+++       DD+
Sbjct: 137 QDKVKKSLSRKQQQVDLKPQPQAQSENHQSQLVSQDHMNIDNDHNIASSLYYPTSVFDDK 196

Query: 200 SYLSMVYQDFATWAA--AAAEESWLWGGLWEVEETD 228
            Y+    Q  AT ++  +  +E  LWG LW ++E D
Sbjct: 197 LYMP---QSVATTSSDHSMIDEGHLWGSLWNLDEDD 229

[Close]

BLAST of Lcy09g003170.1 vs. TAIR 10
Match: AT4G13480.1 (myb domain protein 79 )

HSP 1 Score: 188.3 bits (477), Expect = 6.9e-48
Identity = 93/153 (60.78%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 27  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKRG 86
           E+ WRKGPWT EED+LL EYV+VHGEGRW SV+  +GL R GKSCRLRWVNYLRP LKRG
Sbjct: 3   EEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRG 62

Query: 87  HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHF-KKMKPKRKAQIIAPK 146
            +TP EE II+ELHA WGN+WSTIAR LPGRTDNEIKNYWRTHF KK KP       A K
Sbjct: 63  QITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTNN---AEK 122

Query: 147 PDNKTSPPINYEQAKAKEEKEMMKSCERDDLGM 179
             ++     ++++ +  E ++  +  + D LGM
Sbjct: 123 IKSRLLKRQHFKEQREIELQQEQQLFQFDQLGM 152

[Close]

BLAST of Lcy09g003170.1 vs. TAIR 10
Match: AT3G24310.1 (myb domain protein 305 )

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-47
Identity = 94/168 (55.95%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 27  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKRG 86
           E+ WRKGPWT EED+LL +YV++HGEGRW SVA  +GL R GKSCRLRWVNYLRP LKRG
Sbjct: 15  EEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRG 74

Query: 87  HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQIIAPKP 146
            +TP EE II+ELHA WGN+WSTIAR LPGRTDNEIKNYWRTHFKK K K      A K 
Sbjct: 75  QITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKK-KTKSPTN-SAEKT 134

Query: 147 DNKTSPPINYEQAKAKEEKEMMKSCERDDLGMVFTQPAAAAMADDDQS 195
            N+      ++Q +  E ++  +  + + + M        ++ DDD +
Sbjct: 135 KNRILKRQQFQQQRQMELQQEQQLLQFNQIDM----KKIMSLLDDDNN 176

[Close]

BLAST of Lcy09g003170.1 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 171.4 bits (433), Expect = 8.7e-43
Identity = 76/116 (65.52%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 26  QEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKR 85
           QE+  RKGPWT +ED LL  +V + G+ RW  +A  SGLNRTGKSCRLRWVNYL PGLKR
Sbjct: 3   QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKR 62

Query: 86  GHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQI 142
           G +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K  +
Sbjct: 63  GKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPV 118

[Close]

BLAST of Lcy09g003170.1 vs. TAIR 10
Match: AT5G59780.3 (myb domain protein 59 )

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-42
Identity = 94/199 (47.24%), Postives = 120/199 (60.30%), Query Frame = 0


Query: 27  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSGLNRTGKSCRLRWVNYLRPGLKRG 86
           ++E+RKGPWT +ED LL  +V + G+ RW  VA  SGLNRTGKSCRLRWVNYL PGLKRG
Sbjct: 5   QEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRG 64

Query: 87  HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKAQIIAPKP 146
            +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K K + K + ++P  
Sbjct: 65  KMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRK-KAQEKKRPMSPTS 124

Query: 147 DN----KTSPPINYEQAKAKEEKEMMKSCE-----RDDLGMVFTQPAAAAMADDDQSYLS 206
            +     +S      Q       +M + CE      DD+     Q  A  +     +Y S
Sbjct: 125 SSSNCCSSSMTTTTSQDTGGSNGKMNQECEDGYYSMDDIWREIDQSGANVIKPVKDNYYS 184

Query: 207 --MVYQDFATWAAAAAEES 215
               Y +F   A+   E S
Sbjct: 185 EQSCYLNFPPLASPTWESS 202

The following BLAST results are available for this feature:

BLAST of Lcy09g003170.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX82	1.2e-41	65.52	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
Q4JL84	2.7e-41	47.24	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]
Q9C9G7	7.9e-41	65.14	Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1	[more]
E0CJS3	1.4e-40	65.14	MYB-like transcription factor EOBII OS=Petunia hybrida OX=4102 GN=EOBII PE=2 SV=...	[more]
Q10MB4	1.4e-40	63.96	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]

BLAST of Lcy09g003170.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRA0	4.4e-95	85.71	transcription factor MYB59-like OS=Cucurbita moschata OX=3662 GN=LOC111456806 PE...	[more]
A0A6J1JQZ1	9.9e-95	85.22	transcription factor MYB59-like OS=Cucurbita maxima OX=3661 GN=LOC111487542 PE=4...	[more]
A0A5A7T8Y5	6.9e-80	71.50	Transcription factor MYB59-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CAT1	7.6e-79	70.83	transcription factor MYB59-like OS=Cucumis melo OX=3656 GN=LOC103498747 PE=4 SV=...	[more]
A0A0A0KSK2	1.6e-73	72.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G641610 PE=4 SV=1	[more]

BLAST of Lcy09g003170.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954581.1	9.2e-95	85.71	transcription factor MYB59-like [Cucurbita moschata]	[more]
KAG6602540.1	1.6e-94	85.71	Transcription factor MYB59, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022990755.1	2.0e-94	85.22	transcription factor MYB59-like [Cucurbita maxima]	[more]
XP_023554284.1	7.8e-94	85.22	transcription factor MYB59-like [Cucurbita pepo subsp. pepo]	[more]
XP_038889193.1	8.1e-83	78.16	transcription factor MYB59-like [Benincasa hispida]	[more]

BLAST of Lcy09g003170.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G30210.1	5.8e-55	50.46	myb domain protein 121	[more]
AT4G13480.1	6.9e-48	60.78	myb domain protein 79	[more]
AT3G24310.1	4.5e-47	55.95	myb domain protein 305	[more]
AT3G46130.1	8.7e-43	65.52	myb domain protein 48	[more]
AT5G59780.3	1.9e-42	47.24	myb domain protein 59	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 31..81 e-value: 1.7E-16 score: 70.8 coord: 84..132 e-value: 7.9E-14 score: 62.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 80..130 score: 9.465514
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 27..79 score: 11.625421
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 34..79 e-value: 5.10705E-11 score: 54.1186
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 89..130 e-value: 3.41694E-9 score: 49.4962
None	No IPR available	GENE3D	1.10.10.60		coord: 32..84 e-value: 1.4E-19 score: 71.8
None	No IPR available	GENE3D	1.10.10.60		coord: 87..171 e-value: 4.9E-20 score: 73.3
None	No IPR available	PANTHER	PTHR45675:SF17	MYB TRANSCRIPTION FACTOR	coord: 25..227
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 32..79 e-value: 2.7E-17 score: 62.7 coord: 86..129 e-value: 1.7E-13 score: 50.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 27..83 score: 25.672489
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 84..134 score: 21.368599
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 25..227
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 30..126

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy09g003170	Lcy09g003170	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy09g003170.1.exon3	Lcy09g003170.1.exon3	exon
Lcy09g003170.1.exon2	Lcy09g003170.1.exon2	exon
Lcy09g003170.1.exon1	Lcy09g003170.1.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy09g003170.1.utr3p1	Lcy09g003170.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy09g003170.1.cds3	Lcy09g003170.1.cds3	CDS
Lcy09g003170.1.cds2	Lcy09g003170.1.cds2	CDS
Lcy09g003170.1.cds1	Lcy09g003170.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy09g003170.1.utr5p1	Lcy09g003170.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy09g003170.1	Lcy09g003170.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding