Lcy06g012460.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy06g012460.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr06: 16069169 .. 16070161 (-)
Sequence length	993
RNA-Seq Expression	Lcy06g012460.1
Synteny	Lcy06g012460.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCGGTTTTGGTGGAATGAAACAGATGGTGGTAGAGGAATTCATTGGGTTAAATGGAAGGATTTGTGTAGGCCAAAGTGCTTGGGAGGGTTGGGTTTTAAGGATCTTGAATTGTTTAATCAAGCTCTTCTGGCTAAGCAATGTTGGAGTATTTTAAATGAGCCTTCATCGTTGTTATCACAAGTACTTAAGAGTCGCTATTTCCCTCATTGTGATTTTCTAGATGCAACAGTGAGGCATAACCCTTCTTTTATCTGGTGCAGTTTAGTTTGGGGATGGGAAATTTTGCAGAAGGGTCTCCGTTGGCGTCTGGGGAACGGTCAATCAATTCGGGTTTACAACATGCCCTGGCTGCCACTAGAAGATTGTCCCCTTGTAAAATCTCCTGTTTCCCTACCTGTTGATGCGCGGGTCTGTGACCTTTTTACGGATTTTGGGGGTTGGGATGTGCAGGCTATACATAACCATTTTCTTCCTGAGGAAGCAGATCTCATTTTTTCGATTCCTATCCCTCCTTTGGGCCCAGACCGACTTATTTGGCATTTTGAGGCTAACGAGAAATTTACAGTCAAGAGTGGTTATCGAGTGGGCCAAATTCCGACTCTTCAACGATACCCTTCTACTTCAAATTTTGTTTCATTATTGTCTTGGTGGAAGAGTTTCTGGAAGATGCAAATCTCAGGGAAGATTAAGATCTTAATGTGGCAGTTGTGTCTGAATCGACTACCAACTCTCTTTAATCTTCTGTGCAGAGGTTTAGATGTTCCCAATATCTGTCAGTTCTGTGGACGGTATGGGAAAGACGACATTCATGTTTTTCGGATGTGTAAATTTGCTCGACGACAGTGGGCTCAATCAAAATTCTCTTCTTTCCTCAATCACTGTCTGATCTCTTCGTTATGGCTAATGGTTCAAGAGTTTCGGGAAGAACGATTGTGGGGGGAGTTGGAAGAGCTGTCGATTTTCCTATGGGCTTTCTGGAACGCTTGA

mRNA sequence

ATGGCGCGGTTTTGGTGGAATGAAACAGATGGTGGTAGAGGAATTCATTGGGTTAAATGGAAGGATTTGTGTAGGCCAAAGTGCTTGGGAGGGTTGGGTTTTAAGGATCTTGAATTGTTTAATCAAGCTCTTCTGGCTAAGCAATGTTGGAGTATTTTAAATGAGCCTTCATCGTTGTTATCACAAGTACTTAAGAGTCGCTATTTCCCTCATTGTGATTTTCTAGATGCAACAGTGAGGCATAACCCTTCTTTTATCTGGTGCAGTTTAGTTTGGGGATGGGAAATTTTGCAGAAGGGTCTCCGTTGGCGTCTGGGGAACGGTCAATCAATTCGGGTTTACAACATGCCCTGGCTGCCACTAGAAGATTGTCCCCTTGTAAAATCTCCTGTTTCCCTACCTGTTGATGCGCGGGTCTGTGACCTTTTTACGGATTTTGGGGGTTGGGATGTGCAGGCTATACATAACCATTTTCTTCCTGAGGAAGCAGATCTCATTTTTTCGATTCCTATCCCTCCTTTGGGCCCAGACCGACTTATTTGGCATTTTGAGGCTAACGAGAAATTTACAGTCAAGAGTGGTTATCGAGTGGGCCAAATTCCGACTCTTCAACGATACCCTTCTACTTCAAATTTTGTTTCATTATTGTCTTGGTGGAAGAGTTTCTGGAAGATGCAAATCTCAGGGAAGATTAAGATCTTAATGTGGCAGTTGTGTCTGAATCGACTACCAACTCTCTTTAATCTTCTGTGCAGAGGTTTAGATGTTCCCAATATCTGTCAGTTCTGTGGACGGTATGGGAAAGACGACATTCATGTTTTTCGGATGTGTAAATTTGCTCGACGACAGTGGGCTCAATCAAAATTCTCTTCTTTCCTCAATCACTGTCTGATCTCTTCGTTATGGCTAATGGTTCAAGAGTTTCGGGAAGAACGATTGTGGGGGGAGTTGGAAGAGCTGTCGATTTTCCTATGGGCTTTCTGGAACGCTTGA

Coding sequence (CDS)

ATGGCGCGGTTTTGGTGGAATGAAACAGATGGTGGTAGAGGAATTCATTGGGTTAAATGGAAGGATTTGTGTAGGCCAAAGTGCTTGGGAGGGTTGGGTTTTAAGGATCTTGAATTGTTTAATCAAGCTCTTCTGGCTAAGCAATGTTGGAGTATTTTAAATGAGCCTTCATCGTTGTTATCACAAGTACTTAAGAGTCGCTATTTCCCTCATTGTGATTTTCTAGATGCAACAGTGAGGCATAACCCTTCTTTTATCTGGTGCAGTTTAGTTTGGGGATGGGAAATTTTGCAGAAGGGTCTCCGTTGGCGTCTGGGGAACGGTCAATCAATTCGGGTTTACAACATGCCCTGGCTGCCACTAGAAGATTGTCCCCTTGTAAAATCTCCTGTTTCCCTACCTGTTGATGCGCGGGTCTGTGACCTTTTTACGGATTTTGGGGGTTGGGATGTGCAGGCTATACATAACCATTTTCTTCCTGAGGAAGCAGATCTCATTTTTTCGATTCCTATCCCTCCTTTGGGCCCAGACCGACTTATTTGGCATTTTGAGGCTAACGAGAAATTTACAGTCAAGAGTGGTTATCGAGTGGGCCAAATTCCGACTCTTCAACGATACCCTTCTACTTCAAATTTTGTTTCATTATTGTCTTGGTGGAAGAGTTTCTGGAAGATGCAAATCTCAGGGAAGATTAAGATCTTAATGTGGCAGTTGTGTCTGAATCGACTACCAACTCTCTTTAATCTTCTGTGCAGAGGTTTAGATGTTCCCAATATCTGTCAGTTCTGTGGACGGTATGGGAAAGACGACATTCATGTTTTTCGGATGTGTAAATTTGCTCGACGACAGTGGGCTCAATCAAAATTCTCTTCTTTCCTCAATCACTGTCTGATCTCTTCGTTATGGCTAATGGTTCAAGAGTTTCGGGAAGAACGATTGTGGGGGGAGTTGGAAGAGCTGTCGATTTTCCTATGGGCTTTCTGGAACGCTTGA

Protein sequence

MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPLGPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLISSLWLMVQEFREERLWGELEELSIFLWAFWNA

Homology

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BLAST of Lcy06g012460.1 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.3e-27
Identity = 56/127 (44.09%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MARFWWNETDGGRGIHWVKWKDLCRPK-CLGGLGFKDLELFNQALLAKQCWSILNEPSSL 60
           M  FWW+  +  R I WV W+ LC+ K   GGLGF+DL  FNQALLAKQ + I+++P +L
Sbjct: 25  MTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTL 84

Query: 61  LSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWL 120
           LS++L+SRYFPH   ++ +V   PS+ W S++ G E+L +GL   +G+G   +V+   W+
Sbjct: 85  LSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144

Query: 121 PLEDCPL 127
            +++ PL
Sbjct: 145 -MDETPL 150

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BLAST of Lcy06g012460.1 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 8.0e-23
Identity = 88/340 (25.88%), Postives = 150/340 (44.12%), Query Frame = 0


Query: 4   FWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQV 63
           F W  T   +  H VKW  +C PK  GGLG +  +  N+AL++K  W +L E +SL + V
Sbjct: 73  FLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLV 132

Query: 64  LKSRYF--PHCDFLDATVRHNPSFIWCSLVWGW-EILQKGLRWRLGNGQSIRVYNMPWL- 123
           L+ +Y      D      + + S  W S+  G  +++  G+ W  G+GQ IR +   W+ 
Sbjct: 133 LQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVS 192

Query: 124 --PLEDCPLVKSPVSLPVDARVC-DLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-- 183
             PL +    + P     D  V  DL+    GWD   I  +        + ++ +  +  
Sbjct: 193 GKPLLELDNGERPTD--CDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTG 252

Query: 184 GPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKIL 243
             DRL W F  + +F+V+S Y +  +  + R P+ ++F + L      WK+++  ++K  
Sbjct: 253 ARDRLSWKFSQDGQFSVRSAYEMLTVDEVPR-PNMASFFNCL------WKVRVPERVKTF 312

Query: 244 MWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWA----QSKFS 303
           +W +    + T      R L   N+CQ C    +  +HV R C      W     Q +  
Sbjct: 313 LWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQ 372

Query: 304 SFLNHCLISSLW--LMVQEFREERLWGELEELSIFLWAFW 329
            F +  L   L+  L  +   E+  W  +   ++ +W  W
Sbjct: 373 GFFSKSLFEWLYDNLGDRSGCEDIPWSTI--FAVIIWWGW 401

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BLAST of Lcy06g012460.1 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 2.1e-87
Identity = 155/332 (46.69%), Postives = 212/332 (63.86%), Query Frame = 0


Query: 2   ARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLS 61
           ARFWW  +   + IHWV W  L  PKC GG+GF+DLELFN+ALLAKQCW ILN P+S+LS
Sbjct: 616 ARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLS 675

Query: 62  QVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLPL 121
           +VLK RYF  C F++A +  NPS+IW S++WG ++L+KGLRWR+GNG S+ +Y   W+P 
Sbjct: 676 RVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPN 735

Query: 122 EDCPLVKSPVSLPVDARVCDLFT-DFGGWDVQAIHNHFLPEEADLIFSIPI-PPLGPDRL 181
           +    + S   LP+ +RV  L   + GGW    + + F P+EA  I SIPI      DRL
Sbjct: 736 QPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRL 795

Query: 182 IWHFEANEKFTVKSGYRVGQI--PTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQ 241
           IW++E    ++V+SGY+V  +  P +Q  PS+S+   +  WW  FWKM I  KIK+ +W+
Sbjct: 796 IWNYEKTGVYSVRSGYKVALLNNPCVQA-PSSSSSEEVRCWWNGFWKMHIPNKIKVFLWR 855

Query: 242 LCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCL 301
           LCL+RLPT  NL  RG+++ N C FCGR G+D IH+F +CKFA   W  SKF        
Sbjct: 856 LCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKL----- 915

Query: 302 ISSLWLMVQEFREERLWGELEELSIFLWAFWN 330
             S +L+++E  E     + EEL + +W  WN
Sbjct: 916 --SPFLILRESHESLSKADFEELCVVIWGLWN 939

[Close]

BLAST of Lcy06g012460.1 vs. ExPASy TrEMBL
Match: M5W5F3 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa026368mg PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 150/340 (44.12%), Postives = 195/340 (57.35%), Query Frame = 0


Query: 1   MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
           MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL+
Sbjct: 525 MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 584

Query: 61  SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
           +++ ++RY P   FL+A V  NPSFIW SL WG E+L KGLRWR+G+G SI+VY   WLP
Sbjct: 585 ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLP 644

Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
              C  + SP  LP+  RVCDLFT  G W+V  + + F  +E D I  IP+  L G D L
Sbjct: 645 APSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL 704

Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
           IWH+E N  ++VKSGYR+  +   +     S  V L S +WK  W ++I  KIK  +W+ 
Sbjct: 705 IWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRC 764

Query: 241 CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI 300
             + LP    L  R +    IC  C R  +  +H   +C+ A+  W  S + +      +
Sbjct: 765 AWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVWRNSAWGN------V 824

Query: 301 SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN 330
             +W  V  FRE  LW  L      EE  +F    W  WN
Sbjct: 825 CEVW-RVNSFRE--LWHALQLSSSGEEQGLFAYLCWGLWN 855

[Close]

BLAST of Lcy06g012460.1 vs. ExPASy TrEMBL
Match: A0A251NPF0 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G123900 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 150/340 (44.12%), Postives = 195/340 (57.35%), Query Frame = 0


Query: 1   MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
           MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL+
Sbjct: 488 MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 547

Query: 61  SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
           +++ ++RY P   FL+A V  NPSFIW SL WG E+L KGLRWR+G+G SI+VY   WLP
Sbjct: 548 ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLP 607

Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
              C  + SP  LP+  RVCDLFT  G W+V  + + F  +E D I  IP+  L G D L
Sbjct: 608 APSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL 667

Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
           IWH+E N  ++VKSGYR+  +   +     S  V L S +WK  W ++I  KIK  +W+ 
Sbjct: 668 IWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRC 727

Query: 241 CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI 300
             + LP    L  R +    IC  C R  +  +H   +C+ A+  W  S + +      +
Sbjct: 728 AWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVWRNSAWGN------V 787

Query: 301 SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN 330
             +W  V  FRE  LW  L      EE  +F    W  WN
Sbjct: 788 CEVW-RVNSFRE--LWHALQLSSSGEEQGLFAYLCWGLWN 818

[Close]

BLAST of Lcy06g012460.1 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 9.6e-72
Identity = 145/335 (43.28%), Postives = 191/335 (57.01%), Query Frame = 0


Query: 1    MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
            MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL+
Sbjct: 754  MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 813

Query: 61   SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
            +++ ++RY P   FL+A V  NPSFIW SL WG E+L KGLRWR+GNG SI+VY   WLP
Sbjct: 814  ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLP 873

Query: 121  LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
                  + SP  LP+   VCDLFT  G W+V  + + F  +E D    IP+  L G D L
Sbjct: 874  APSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCL 933

Query: 181  IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
            IWH+E N  ++VKSGYR+  +   +     S  V L S +WK  W ++I  KIK  +W+ 
Sbjct: 934  IWHYERNGMYSVKSGYRLACLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRC 993

Query: 241  CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI 300
              + LP    L  R +    IC  C R  +  +H   +C+ A+  W  S + +      +
Sbjct: 994  AWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRV 1053

Query: 301  SS---LWLMVQEFREERLWGELEELSIFL-WAFWN 330
            +S   LW  +Q        GE + L  +L W  WN
Sbjct: 1054 NSFRELWHALQLSSS----GEEQGLFAYLCWGLWN 1084

[Close]

BLAST of Lcy06g012460.1 vs. ExPASy TrEMBL
Match: M5WJW2 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G011200 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 135/294 (45.92%), Postives = 179/294 (60.88%), Query Frame = 0


Query: 1    MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
            MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL+
Sbjct: 775  MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 834

Query: 61   SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
            +++ ++RY P   FL+A V  NPSFIW SL WG E+L KG+RWR+G+G SI+VY   WLP
Sbjct: 835  ARIFRARYHPSVPFLEAEVGTNPSFIWGSLQWGKELLNKGVRWRVGSGVSIQVYTDKWLP 894

Query: 121  LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
               C  + SP  LP+  RVCDLFT  G W+V  + + F  +E D I  IP+  L G D L
Sbjct: 895  APSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL 954

Query: 181  IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
            IWH+E N  ++VKSGYR+ ++   +     S  V L S +WK  W ++I  KIK  +W+ 
Sbjct: 955  IWHYERNGMYSVKSGYRLARLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRC 1014

Query: 241  CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSF 293
              + LP    L  R +    IC  C R  +  +H   +C+ A+       F++F
Sbjct: 1015 AWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKENINSFFFTNF 1068

[Close]

BLAST of Lcy06g012460.1 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 332.4 bits (851), Expect = 4.4e-87
Identity = 155/332 (46.69%), Postives = 212/332 (63.86%), Query Frame = 0


Query: 2   ARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLS 61
           ARFWW  +   + IHWV W  L  PKC GG+GF+DLELFN+ALLAKQCW ILN P+S+LS
Sbjct: 616 ARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLS 675

Query: 62  QVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLPL 121
           +VLK RYF  C F++A +  NPS+IW S++WG ++L+KGLRWR+GNG S+ +Y   W+P 
Sbjct: 676 RVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPN 735

Query: 122 EDCPLVKSPVSLPVDARVCDLFT-DFGGWDVQAIHNHFLPEEADLIFSIPI-PPLGPDRL 181
           +    + S   LP+ +RV  L   + GGW    + + F P+EA  I SIPI      DRL
Sbjct: 736 QPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRL 795

Query: 182 IWHFEANEKFTVKSGYRVGQI--PTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQ 241
           IW++E    ++V+SGY+V  +  P +Q  PS+S+   +  WW  FWKM I  KIK+ +W+
Sbjct: 796 IWNYEKTGVYSVRSGYKVALLNNPCVQA-PSSSSSEEVRCWWNGFWKMHIPNKIKVFLWR 855

Query: 242 LCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCL 301
           LCL+RLPT  NL  RG+++ N C FCGR G+D IH+F +CKFA   W  SKF        
Sbjct: 856 LCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKL----- 915

Query: 302 ISSLWLMVQEFREERLWGELEELSIFLWAFWN 330
             S +L+++E  E     + EEL + +W  WN
Sbjct: 916 --SPFLILRESHESLSKADFEELCVVIWGLWN 939

[Close]

BLAST of Lcy06g012460.1 vs. NCBI nr
Match: ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica])

HSP 1 Score: 289.7 bits (740), Expect = 3.3e-74
Identity = 150/340 (44.12%), Postives = 195/340 (57.35%), Query Frame = 0


Query: 1   MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
           MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL+
Sbjct: 488 MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 547

Query: 61  SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
           +++ ++RY P   FL+A V  NPSFIW SL WG E+L KGLRWR+G+G SI+VY   WLP
Sbjct: 548 ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLP 607

Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
              C  + SP  LP+  RVCDLFT  G W+V  + + F  +E D I  IP+  L G D L
Sbjct: 608 APSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL 667

Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
           IWH+E N  ++VKSGYR+  +   +     S  V L S +WK  W ++I  KIK  +W+ 
Sbjct: 668 IWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRC 727

Query: 241 CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI 300
             + LP    L  R +    IC  C R  +  +H   +C+ A+  W  S + +      +
Sbjct: 728 AWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVWRNSAWGN------V 787

Query: 301 SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN 330
             +W  V  FRE  LW  L      EE  +F    W  WN
Sbjct: 788 CEVW-RVNSFRE--LWHALQLSSSGEEQGLFAYLCWGLWN 818

[Close]

BLAST of Lcy06g012460.1 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 280.4 bits (716), Expect = 2.0e-71
Identity = 145/335 (43.28%), Postives = 191/335 (57.01%), Query Frame = 0


Query: 1    MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
            MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL+
Sbjct: 754  MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 813

Query: 61   SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
            +++ ++RY P   FL+A V  NPSFIW SL WG E+L KGLRWR+GNG SI+VY   WLP
Sbjct: 814  ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLP 873

Query: 121  LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
                  + SP  LP+   VCDLFT  G W+V  + + F  +E D    IP+  L G D L
Sbjct: 874  APSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCL 933

Query: 181  IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
            IWH+E N  ++VKSGYR+  +   +     S  V L S +WK  W ++I  KIK  +W+ 
Sbjct: 934  IWHYERNGMYSVKSGYRLACLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRC 993

Query: 241  CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI 300
              + LP    L  R +    IC  C R  +  +H   +C+ A+  W  S + +      +
Sbjct: 994  AWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRV 1053

Query: 301  SS---LWLMVQEFREERLWGELEELSIFL-WAFWN 330
            +S   LW  +Q        GE + L  +L W  WN
Sbjct: 1054 NSFRELWHALQLSSS----GEEQGLFAYLCWGLWN 1084

[Close]

BLAST of Lcy06g012460.1 vs. NCBI nr
Match: ONI09819.1 (hypothetical protein PRUPE_4G011200 [Prunus persica])

HSP 1 Score: 279.6 bits (714), Expect = 3.4e-71
Identity = 135/294 (45.92%), Postives = 179/294 (60.88%), Query Frame = 0


Query: 1    MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
            MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL+
Sbjct: 775  MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 834

Query: 61   SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
            +++ ++RY P   FL+A V  NPSFIW SL WG E+L KG+RWR+G+G SI+VY   WLP
Sbjct: 835  ARIFRARYHPSVPFLEAEVGTNPSFIWGSLQWGKELLNKGVRWRVGSGVSIQVYTDKWLP 894

Query: 121  LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
               C  + SP  LP+  RVCDLFT  G W+V  + + F  +E D I  IP+  L G D L
Sbjct: 895  APSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL 954

Query: 181  IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
            IWH+E N  ++VKSGYR+ ++   +     S  V L S +WK  W ++I  KIK  +W+ 
Sbjct: 955  IWHYERNGMYSVKSGYRLARLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRC 1014

Query: 241  CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSF 293
              + LP    L  R +    IC  C R  +  +H   +C+ A+       F++F
Sbjct: 1015 AWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKENINSFFFTNF 1068

[Close]

BLAST of Lcy06g012460.1 vs. NCBI nr
Match: XP_015382226.1 (uncharacterized protein LOC107175329, partial [Citrus sinensis])

HSP 1 Score: 265.8 bits (678), Expect = 5.1e-67
Identity = 123/329 (37.39%), Postives = 188/329 (57.14%), Query Frame = 0


Query: 1   MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
           +ARFWW  +   RGIHW KW+ LC+ K  GG+GF+D   FNQAL+AKQ W I+  P SL+
Sbjct: 432 IARFWWGSSSDRRGIHWAKWEKLCQAKMRGGMGFRDFSCFNQALIAKQGWRIIQHPESLM 491

Query: 61  SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
           ++VLK++YF    F++A +   PSF+W S++WG +I+QKGLRW++G+G  + +Y   WLP
Sbjct: 492 ARVLKAKYFNQSSFMEAKLGSRPSFVWRSILWGRQIMQKGLRWKIGSGNQVCIYKSNWLP 551

Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
             +     SP +L + A V DL  +   W  +  + HF+ E+A +I  I +P    PD+ 
Sbjct: 552 RLEAFKPFSPPTLDIQAVVADLIDENQNWKKEICYQHFMKEDAAMIVRIQLPNTPKPDQY 611

Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLC 240
           +WH++   K++VKSGY++         P +S+  S LS W   W  ++  KIKI MW+  
Sbjct: 612 LWHYDKYGKYSVKSGYQIALKLKCPDSPCSSD--SSLSQWNVIWAAELPEKIKIFMWRAV 671

Query: 241 LNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLIS 300
            N LPT  NL  R +    IC+ CG   +D IH    CK A++ W  +  +  +   +  
Sbjct: 672 KNLLPTTSNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEIEKLVQQ 731

Query: 301 SLWLMVQEFREERLWGELEELSIFLWAFW 329
            L  ++ E + ++   ELE + +  W  W
Sbjct: 732 DLMAVLVEIQRKKGKKELELIVVLCWTIW 758

[Close]

BLAST of Lcy06g012460.1 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 168.7 bits (426), Expect = 7.8e-42
Identity = 103/298 (34.56%), Postives = 142/298 (47.65%), Query Frame = 0


Query: 1   MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
           +A FWW      +G+HW  W  L   K  GG+GFKD+E FN ALL KQ W +L+ P SL+
Sbjct: 25  LADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLM 84

Query: 61  SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
           ++V KSRYF   D L+A +   PSF+W S+    EIL++G R  +GNG+ I ++   WL 
Sbjct: 85  AKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLD 144

Query: 121 LEDCPLVKSPVSLPVD--------ARVCDLFTDFG-GWDVQAIHNHFLPEEADLIFSI-P 180
            +          +P           +V DL  + G  W    I   F   E  LI  + P
Sbjct: 145 SKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRP 204

Query: 181 IPPLGPDRLIWHFEANEKFTVKSGYRV-GQIPTLQRYPSTSNFVSLLSWWKSFWKMQISG 240
                 D   W + ++  +TVKSGY V  QI   +  P   +  SL   ++  WK Q S 
Sbjct: 205 GGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSP 264

Query: 241 KIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQS 288
           KI+  +W+   N LP    L  R L   + C  C    +   H+   C FAR  WA S
Sbjct: 265 KIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAIS 322

[Close]

BLAST of Lcy06g012460.1 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 123.2 bits (308), Expect = 3.8e-28
Identity = 56/127 (44.09%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MARFWWNETDGGRGIHWVKWKDLCRPK-CLGGLGFKDLELFNQALLAKQCWSILNEPSSL 60
           M  FWW+  +  R I WV W+ LC+ K   GGLGF+DL  FNQALLAKQ + I+++P +L
Sbjct: 25  MTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTL 84

Query: 61  LSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWL 120
           LS++L+SRYFPH   ++ +V   PS+ W S++ G E+L +GL   +G+G   +V+   W+
Sbjct: 85  LSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144

Query: 121 PLEDCPL 127
            +++ PL
Sbjct: 145 -MDETPL 150

[Close]

BLAST of Lcy06g012460.1 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-19
Identity = 69/247 (27.94%), Postives = 106/247 (42.91%), Query Frame = 0


Query: 64  LKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIR------VYNMP 123
           +K+RYF     LDA VR   S+ W SL+ G  +L+KG R  +G+GQ+IR      V + P
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60

Query: 124 WLPLEDCPLVKSPVSLPVDARVCDLFTDFGG---WDVQAIHNHFLPEEADLIFSIPI-PP 183
             PL      K       +  + +LF   G    WD   I       +   I  I +   
Sbjct: 61  PRPLNTEETYK-------EMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKS 120

Query: 184 LGPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKI 243
             PD++IW++    ++TV+SGY +         P+ +     +      W + I  K+K 
Sbjct: 121 KKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKH 180

Query: 244 LMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFL 301
            +W+     L T   L  RG+ +   C  C R  +   H    C FA   W  S  SS +
Sbjct: 181 FLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSD-SSLI 239

[Close]

BLAST of Lcy06g012460.1 vs. TAIR 10
Match: AT1G33710.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 46.6 bits (109), Expect = 4.5e-05
Identity = 32/118 (27.12%), Postives = 51/118 (43.22%), Query Frame = 0


Query: 167 FSIPIPPLGPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQ 226
           FSI +P L  +  ++ +   +K    +G+   +     R  S      ++SW K+ W   
Sbjct: 4   FSIDLPTLSGELDVYDWVVEDKLC--NGFSSAKTWAALRPRS-----DVVSWAKTVWFKG 63

Query: 227 ISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQW 285
            + K    MW   L+RLPT   L   G+ +   C  C    +D  H+F  C+FA   W
Sbjct: 64  ATPKHAFHMWVTNLDRLPTKTRLASWGMQLQTTCGLCSLDIEDRDHLFLTCEFACFLW 114

[Close]

BLAST of Lcy06g012460.1 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 45.8 bits (107), Expect = 7.7e-05
Identity = 23/67 (34.33%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 217 SWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRM 276
           +W    W ++IS KIK+L+W+   N LP    LL R + +   C  C R  +   H+   
Sbjct: 4   NWIGDIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRC-RDFETITHILFN 63

Query: 277 CKFARRQ 284
           C FA+R+
Sbjct: 64  CPFAQRE 69

The following BLAST results are available for this feature:

BLAST of Lcy06g012460.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	5.3e-27	44.09	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0C2F6	8.0e-23	25.88	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Lcy06g012460.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAR4	2.1e-87	46.69	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
M5W5F3	1.6e-74	44.12	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A251NPF0	1.6e-74	44.12	Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU...	[more]
A0A5E4FZN9	9.6e-72	43.28	PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1	[more]
M5WJW2	1.6e-71	45.92	Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU...	[more]

BLAST of Lcy06g012460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150918.1	4.4e-87	46.69	uncharacterized protein LOC111018954 [Momordica charantia]	[more]
ONI01138.1	3.3e-74	44.12	hypothetical protein PRUPE_6G123900 [Prunus persica]	[more]
VVA32947.1	2.0e-71	43.28	PREDICTED: retrotransposon [Prunus dulcis]	[more]
ONI09819.1	3.4e-71	45.92	hypothetical protein PRUPE_4G011200 [Prunus persica]	[more]
XP_015382226.1	5.1e-67	37.39	uncharacterized protein LOC107175329, partial [Citrus sinensis]	[more]

BLAST of Lcy06g012460.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	7.8e-42	34.56	Ribonuclease H-like superfamily protein	[more]
ATMG00310.1	3.8e-28	44.09	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G09510.1	1.1e-19	27.94	Ribonuclease H-like superfamily protein	[more]
AT1G33710.1	4.5e-05	27.12	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G26855.1	7.7e-05	34.33	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 209..284 e-value: 2.2E-13 score: 50.7
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 2..205
None	No IPR available	PANTHER	PTHR33116:SF41	SUBFAMILY NOT NAMED	coord: 2..205

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy06g012460	Lcy06g012460	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g012460.1.exon1	Lcy06g012460.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g012460.1.cds1	Lcy06g012460.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy06g012460.1	Lcy06g012460.1-protein	polypeptide