Homology
BLAST of Lcy06g012460 vs. ExPASy Swiss-Prot
Match:
P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 5.3e-27
Identity = 56/127 (44.09%), Postives = 85/127 (66.93%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPK-CLGGLGFKDLELFNQALLAKQCWSILNEPSSL 60
M FWW+ + R I WV W+ LC+ K GGLGF+DL FNQALLAKQ + I+++P +L
Sbjct: 25 MTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTL 84
Query: 61 LSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWL 120
LS++L+SRYFPH ++ +V PS+ W S++ G E+L +GL +G+G +V+ W+
Sbjct: 85 LSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144
Query: 121 PLEDCPL 127
+++ PL
Sbjct: 145 -MDETPL 150
BLAST of Lcy06g012460 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 8.0e-23
Identity = 88/340 (25.88%), Postives = 150/340 (44.12%), Query Frame = 0
Query: 4 FWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQV 63
F W T + H VKW +C PK GGLG + + N+AL++K W +L E +SL + V
Sbjct: 73 FLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLV 132
Query: 64 LKSRYF--PHCDFLDATVRHNPSFIWCSLVWGW-EILQKGLRWRLGNGQSIRVYNMPWL- 123
L+ +Y D + + S W S+ G +++ G+ W G+GQ IR + W+
Sbjct: 133 LQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVS 192
Query: 124 --PLEDCPLVKSPVSLPVDARVC-DLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-- 183
PL + + P D V DL+ GWD I + + ++ + +
Sbjct: 193 GKPLLELDNGERPTD--CDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTG 252
Query: 184 GPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKIL 243
DRL W F + +F+V+S Y + + + R P+ ++F + L WK+++ ++K
Sbjct: 253 ARDRLSWKFSQDGQFSVRSAYEMLTVDEVPR-PNMASFFNCL------WKVRVPERVKTF 312
Query: 244 MWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWA----QSKFS 303
+W + + T R L N+CQ C + +HV R C W Q +
Sbjct: 313 LWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQ 372
Query: 304 SFLNHCLISSLW--LMVQEFREERLWGELEELSIFLWAFW 329
F + L L+ L + E+ W + ++ +W W
Sbjct: 373 GFFSKSLFEWLYDNLGDRSGCEDIPWSTI--FAVIIWWGW 401
BLAST of Lcy06g012460 vs. ExPASy TrEMBL
Match:
A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)
HSP 1 Score: 332.4 bits (851), Expect = 2.1e-87
Identity = 155/332 (46.69%), Postives = 212/332 (63.86%), Query Frame = 0
Query: 2 ARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLS 61
ARFWW + + IHWV W L PKC GG+GF+DLELFN+ALLAKQCW ILN P+S+LS
Sbjct: 616 ARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLS 675
Query: 62 QVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLPL 121
+VLK RYF C F++A + NPS+IW S++WG ++L+KGLRWR+GNG S+ +Y W+P
Sbjct: 676 RVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPN 735
Query: 122 EDCPLVKSPVSLPVDARVCDLFT-DFGGWDVQAIHNHFLPEEADLIFSIPI-PPLGPDRL 181
+ + S LP+ +RV L + GGW + + F P+EA I SIPI DRL
Sbjct: 736 QPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRL 795
Query: 182 IWHFEANEKFTVKSGYRVGQI--PTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQ 241
IW++E ++V+SGY+V + P +Q PS+S+ + WW FWKM I KIK+ +W+
Sbjct: 796 IWNYEKTGVYSVRSGYKVALLNNPCVQA-PSSSSSEEVRCWWNGFWKMHIPNKIKVFLWR 855
Query: 242 LCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCL 301
LCL+RLPT NL RG+++ N C FCGR G+D IH+F +CKFA W SKF
Sbjct: 856 LCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKL----- 915
Query: 302 ISSLWLMVQEFREERLWGELEELSIFLWAFWN 330
S +L+++E E + EEL + +W WN
Sbjct: 916 --SPFLILRESHESLSKADFEELCVVIWGLWN 939
BLAST of Lcy06g012460 vs. ExPASy TrEMBL
Match:
M5W5F3 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa026368mg PE=4 SV=1)
HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 150/340 (44.12%), Postives = 195/340 (57.35%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
MARFWW + RGIHWVKW+ LC+ K GGLGF+DLE FNQALLAKQCW IL P SL+
Sbjct: 525 MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 584
Query: 61 SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
+++ ++RY P FL+A V NPSFIW SL WG E+L KGLRWR+G+G SI+VY WLP
Sbjct: 585 ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLP 644
Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
C + SP LP+ RVCDLFT G W+V + + F +E D I IP+ L G D L
Sbjct: 645 APSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL 704
Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
IWH+E N ++VKSGYR+ + + S V L S +WK W ++I KIK +W+
Sbjct: 705 IWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRC 764
Query: 241 CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI 300
+ LP L R + IC C R + +H +C+ A+ W S + + +
Sbjct: 765 AWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVWRNSAWGN------V 824
Query: 301 SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN 330
+W V FRE LW L EE +F W WN
Sbjct: 825 CEVW-RVNSFRE--LWHALQLSSSGEEQGLFAYLCWGLWN 855
BLAST of Lcy06g012460 vs. ExPASy TrEMBL
Match:
A0A251NPF0 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G123900 PE=4 SV=1)
HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 150/340 (44.12%), Postives = 195/340 (57.35%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
MARFWW + RGIHWVKW+ LC+ K GGLGF+DLE FNQALLAKQCW IL P SL+
Sbjct: 488 MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 547
Query: 61 SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
+++ ++RY P FL+A V NPSFIW SL WG E+L KGLRWR+G+G SI+VY WLP
Sbjct: 548 ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLP 607
Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
C + SP LP+ RVCDLFT G W+V + + F +E D I IP+ L G D L
Sbjct: 608 APSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL 667
Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
IWH+E N ++VKSGYR+ + + S V L S +WK W ++I KIK +W+
Sbjct: 668 IWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRC 727
Query: 241 CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI 300
+ LP L R + IC C R + +H +C+ A+ W S + + +
Sbjct: 728 AWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVWRNSAWGN------V 787
Query: 301 SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN 330
+W V FRE LW L EE +F W WN
Sbjct: 788 CEVW-RVNSFRE--LWHALQLSSSGEEQGLFAYLCWGLWN 818
BLAST of Lcy06g012460 vs. ExPASy TrEMBL
Match:
A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)
HSP 1 Score: 280.4 bits (716), Expect = 9.6e-72
Identity = 145/335 (43.28%), Postives = 191/335 (57.01%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
MARFWW + RGIHWVKW+ LC+ K GGLGF+DLE FNQALLAKQCW IL P SL+
Sbjct: 754 MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 813
Query: 61 SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
+++ ++RY P FL+A V NPSFIW SL WG E+L KGLRWR+GNG SI+VY WLP
Sbjct: 814 ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLP 873
Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
+ SP LP+ VCDLFT G W+V + + F +E D IP+ L G D L
Sbjct: 874 APSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCL 933
Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
IWH+E N ++VKSGYR+ + + S V L S +WK W ++I KIK +W+
Sbjct: 934 IWHYERNGMYSVKSGYRLACLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRC 993
Query: 241 CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI 300
+ LP L R + IC C R + +H +C+ A+ W S + + +
Sbjct: 994 AWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRV 1053
Query: 301 SS---LWLMVQEFREERLWGELEELSIFL-WAFWN 330
+S LW +Q GE + L +L W WN
Sbjct: 1054 NSFRELWHALQLSSS----GEEQGLFAYLCWGLWN 1084
BLAST of Lcy06g012460 vs. ExPASy TrEMBL
Match:
M5WJW2 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G011200 PE=4 SV=1)
HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 135/294 (45.92%), Postives = 179/294 (60.88%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
MARFWW + RGIHWVKW+ LC+ K GGLGF+DLE FNQALLAKQCW IL P SL+
Sbjct: 775 MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 834
Query: 61 SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
+++ ++RY P FL+A V NPSFIW SL WG E+L KG+RWR+G+G SI+VY WLP
Sbjct: 835 ARIFRARYHPSVPFLEAEVGTNPSFIWGSLQWGKELLNKGVRWRVGSGVSIQVYTDKWLP 894
Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
C + SP LP+ RVCDLFT G W+V + + F +E D I IP+ L G D L
Sbjct: 895 APSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL 954
Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
IWH+E N ++VKSGYR+ ++ + S V L S +WK W ++I KIK +W+
Sbjct: 955 IWHYERNGMYSVKSGYRLARLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRC 1014
Query: 241 CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSF 293
+ LP L R + IC C R + +H +C+ A+ F++F
Sbjct: 1015 AWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKENINSFFFTNF 1068
BLAST of Lcy06g012460 vs. NCBI nr
Match:
XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])
HSP 1 Score: 332.4 bits (851), Expect = 4.4e-87
Identity = 155/332 (46.69%), Postives = 212/332 (63.86%), Query Frame = 0
Query: 2 ARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLS 61
ARFWW + + IHWV W L PKC GG+GF+DLELFN+ALLAKQCW ILN P+S+LS
Sbjct: 616 ARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLS 675
Query: 62 QVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLPL 121
+VLK RYF C F++A + NPS+IW S++WG ++L+KGLRWR+GNG S+ +Y W+P
Sbjct: 676 RVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPN 735
Query: 122 EDCPLVKSPVSLPVDARVCDLFT-DFGGWDVQAIHNHFLPEEADLIFSIPI-PPLGPDRL 181
+ + S LP+ +RV L + GGW + + F P+EA I SIPI DRL
Sbjct: 736 QPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRL 795
Query: 182 IWHFEANEKFTVKSGYRVGQI--PTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQ 241
IW++E ++V+SGY+V + P +Q PS+S+ + WW FWKM I KIK+ +W+
Sbjct: 796 IWNYEKTGVYSVRSGYKVALLNNPCVQA-PSSSSSEEVRCWWNGFWKMHIPNKIKVFLWR 855
Query: 242 LCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCL 301
LCL+RLPT NL RG+++ N C FCGR G+D IH+F +CKFA W SKF
Sbjct: 856 LCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKL----- 915
Query: 302 ISSLWLMVQEFREERLWGELEELSIFLWAFWN 330
S +L+++E E + EEL + +W WN
Sbjct: 916 --SPFLILRESHESLSKADFEELCVVIWGLWN 939
BLAST of Lcy06g012460 vs. NCBI nr
Match:
ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica])
HSP 1 Score: 289.7 bits (740), Expect = 3.3e-74
Identity = 150/340 (44.12%), Postives = 195/340 (57.35%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
MARFWW + RGIHWVKW+ LC+ K GGLGF+DLE FNQALLAKQCW IL P SL+
Sbjct: 488 MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 547
Query: 61 SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
+++ ++RY P FL+A V NPSFIW SL WG E+L KGLRWR+G+G SI+VY WLP
Sbjct: 548 ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGSGVSIQVYTDKWLP 607
Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
C + SP LP+ RVCDLFT G W+V + + F +E D I IP+ L G D L
Sbjct: 608 APSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL 667
Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
IWH+E N ++VKSGYR+ + + S V L S +WK W ++I KIK +W+
Sbjct: 668 IWHYERNGMYSVKSGYRLAGLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRC 727
Query: 241 CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI 300
+ LP L R + IC C R + +H +C+ A+ W S + + +
Sbjct: 728 AWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVWRNSAWGN------V 787
Query: 301 SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN 330
+W V FRE LW L EE +F W WN
Sbjct: 788 CEVW-RVNSFRE--LWHALQLSSSGEEQGLFAYLCWGLWN 818
BLAST of Lcy06g012460 vs. NCBI nr
Match:
VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])
HSP 1 Score: 280.4 bits (716), Expect = 2.0e-71
Identity = 145/335 (43.28%), Postives = 191/335 (57.01%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
MARFWW + RGIHWVKW+ LC+ K GGLGF+DLE FNQALLAKQCW IL P SL+
Sbjct: 754 MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 813
Query: 61 SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
+++ ++RY P FL+A V NPSFIW SL WG E+L KGLRWR+GNG SI+VY WLP
Sbjct: 814 ARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLP 873
Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
+ SP LP+ VCDLFT G W+V + + F +E D IP+ L G D L
Sbjct: 874 APSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCL 933
Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
IWH+E N ++VKSGYR+ + + S V L S +WK W ++I KIK +W+
Sbjct: 934 IWHYERNGMYSVKSGYRLACLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRC 993
Query: 241 CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI 300
+ LP L R + IC C R + +H +C+ A+ W S + + +
Sbjct: 994 AWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRV 1053
Query: 301 SS---LWLMVQEFREERLWGELEELSIFL-WAFWN 330
+S LW +Q GE + L +L W WN
Sbjct: 1054 NSFRELWHALQLSSS----GEEQGLFAYLCWGLWN 1084
BLAST of Lcy06g012460 vs. NCBI nr
Match:
ONI09819.1 (hypothetical protein PRUPE_4G011200 [Prunus persica])
HSP 1 Score: 279.6 bits (714), Expect = 3.4e-71
Identity = 135/294 (45.92%), Postives = 179/294 (60.88%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
MARFWW + RGIHWVKW+ LC+ K GGLGF+DLE FNQALLAKQCW IL P SL+
Sbjct: 775 MARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLV 834
Query: 61 SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
+++ ++RY P FL+A V NPSFIW SL WG E+L KG+RWR+G+G SI+VY WLP
Sbjct: 835 ARIFRARYHPSVPFLEAEVGTNPSFIWGSLQWGKELLNKGVRWRVGSGVSIQVYTDKWLP 894
Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
C + SP LP+ RVCDLFT G W+V + + F +E D I IP+ L G D L
Sbjct: 895 APSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLASLAGHDCL 954
Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQL 240
IWH+E N ++VKSGYR+ ++ + S V L S +WK W ++I KIK +W+
Sbjct: 955 IWHYERNGMYSVKSGYRLARLEKDKMSGEPSARVDLNSKFWKKIWALKIPNKIKFFLWRC 1014
Query: 241 CLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSF 293
+ LP L R + IC C R + +H +C+ A+ F++F
Sbjct: 1015 AWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKENINSFFFTNF 1068
BLAST of Lcy06g012460 vs. NCBI nr
Match:
XP_015382226.1 (uncharacterized protein LOC107175329, partial [Citrus sinensis])
HSP 1 Score: 265.8 bits (678), Expect = 5.1e-67
Identity = 123/329 (37.39%), Postives = 188/329 (57.14%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
+ARFWW + RGIHW KW+ LC+ K GG+GF+D FNQAL+AKQ W I+ P SL+
Sbjct: 432 IARFWWGSSSDRRGIHWAKWEKLCQAKMRGGMGFRDFSCFNQALIAKQGWRIIQHPESLM 491
Query: 61 SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
++VLK++YF F++A + PSF+W S++WG +I+QKGLRW++G+G + +Y WLP
Sbjct: 492 ARVLKAKYFNQSSFMEAKLGSRPSFVWRSILWGRQIMQKGLRWKIGSGNQVCIYKSNWLP 551
Query: 121 LEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRL 180
+ SP +L + A V DL + W + + HF+ E+A +I I +P PD+
Sbjct: 552 RLEAFKPFSPPTLDIQAVVADLIDENQNWKKEICYQHFMKEDAAMIVRIQLPNTPKPDQY 611
Query: 181 IWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLC 240
+WH++ K++VKSGY++ P +S+ S LS W W ++ KIKI MW+
Sbjct: 612 LWHYDKYGKYSVKSGYQIALKLKCPDSPCSSD--SSLSQWNVIWAAELPEKIKIFMWRAV 671
Query: 241 LNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLIS 300
N LPT NL R + IC+ CG +D IH CK A++ W + + + +
Sbjct: 672 KNLLPTTSNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEIEKLVQQ 731
Query: 301 SLWLMVQEFREERLWGELEELSIFLWAFW 329
L ++ E + ++ ELE + + W W
Sbjct: 732 DLMAVLVEIQRKKGKKELELIVVLCWTIW 758
BLAST of Lcy06g012460 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 168.7 bits (426), Expect = 7.8e-42
Identity = 103/298 (34.56%), Postives = 142/298 (47.65%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLL 60
+A FWW +G+HW W L K GG+GFKD+E FN ALL KQ W +L+ P SL+
Sbjct: 25 LADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLM 84
Query: 61 SQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWLP 120
++V KSRYF D L+A + PSF+W S+ EIL++G R +GNG+ I ++ WL
Sbjct: 85 AKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLD 144
Query: 121 LEDCPLVKSPVSLPVD--------ARVCDLFTDFG-GWDVQAIHNHFLPEEADLIFSI-P 180
+ +P +V DL + G W I F E LI + P
Sbjct: 145 SKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRP 204
Query: 181 IPPLGPDRLIWHFEANEKFTVKSGYRV-GQIPTLQRYPSTSNFVSLLSWWKSFWKMQISG 240
D W + ++ +TVKSGY V QI + P + SL ++ WK Q S
Sbjct: 205 GGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSP 264
Query: 241 KIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQS 288
KI+ +W+ N LP L R L + C C + H+ C FAR WA S
Sbjct: 265 KIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAIS 322
BLAST of Lcy06g012460 vs. TAIR 10
Match:
ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 123.2 bits (308), Expect = 3.8e-28
Identity = 56/127 (44.09%), Postives = 85/127 (66.93%), Query Frame = 0
Query: 1 MARFWWNETDGGRGIHWVKWKDLCRPK-CLGGLGFKDLELFNQALLAKQCWSILNEPSSL 60
M FWW+ + R I WV W+ LC+ K GGLGF+DL FNQALLAKQ + I+++P +L
Sbjct: 25 MTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTL 84
Query: 61 LSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIRVYNMPWL 120
LS++L+SRYFPH ++ +V PS+ W S++ G E+L +GL +G+G +V+ W+
Sbjct: 85 LSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144
Query: 121 PLEDCPL 127
+++ PL
Sbjct: 145 -MDETPL 150
BLAST of Lcy06g012460 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 95.1 bits (235), Expect = 1.1e-19
Identity = 69/247 (27.94%), Postives = 106/247 (42.91%), Query Frame = 0
Query: 64 LKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIR------VYNMP 123
+K+RYF LDA VR S+ W SL+ G +L+KG R +G+GQ+IR V + P
Sbjct: 1 MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60
Query: 124 WLPLEDCPLVKSPVSLPVDARVCDLFTDFGG---WDVQAIHNHFLPEEADLIFSIPI-PP 183
PL K + + +LF G WD I + I I +
Sbjct: 61 PRPLNTEETYK-------EMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKS 120
Query: 184 LGPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKI 243
PD++IW++ ++TV+SGY + P+ + + W + I K+K
Sbjct: 121 KKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKH 180
Query: 244 LMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFL 301
+W+ L T L RG+ + C C R + H C FA W S SS +
Sbjct: 181 FLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSD-SSLI 239
BLAST of Lcy06g012460 vs. TAIR 10
Match:
AT1G33710.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 46.6 bits (109), Expect = 4.5e-05
Identity = 32/118 (27.12%), Postives = 51/118 (43.22%), Query Frame = 0
Query: 167 FSIPIPPLGPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQ 226
FSI +P L + ++ + +K +G+ + R S ++SW K+ W
Sbjct: 4 FSIDLPTLSGELDVYDWVVEDKLC--NGFSSAKTWAALRPRS-----DVVSWAKTVWFKG 63
Query: 227 ISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQW 285
+ K MW L+RLPT L G+ + C C +D H+F C+FA W
Sbjct: 64 ATPKHAFHMWVTNLDRLPTKTRLASWGMQLQTTCGLCSLDIEDRDHLFLTCEFACFLW 114
BLAST of Lcy06g012460 vs. TAIR 10
Match:
AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 45.8 bits (107), Expect = 7.7e-05
Identity = 23/67 (34.33%), Postives = 35/67 (52.24%), Query Frame = 0
Query: 217 SWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRM 276
+W W ++IS KIK+L+W+ N LP LL R + + C C R + H+
Sbjct: 4 NWIGDIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRC-RDFETITHILFN 63
Query: 277 CKFARRQ 284
C FA+R+
Sbjct: 64 CPFAQRE 69
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P93295 | 5.3e-27 | 44.09 | Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... | [more] |
| P0C2F6 | 8.0e-23 | 25.88 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DAR4 | 2.1e-87 | 46.69 | uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
| M5W5F3 | 1.6e-74 | 44.12 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
| A0A251NPF0 | 1.6e-74 | 44.12 | Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU... | [more] |
| A0A5E4FZN9 | 9.6e-72 | 43.28 | PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1 | [more] |
| M5WJW2 | 1.6e-71 | 45.92 | Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022150918.1 | 4.4e-87 | 46.69 | uncharacterized protein LOC111018954 [Momordica charantia] | [more] |
| ONI01138.1 | 3.3e-74 | 44.12 | hypothetical protein PRUPE_6G123900 [Prunus persica] | [more] |
| VVA32947.1 | 2.0e-71 | 43.28 | PREDICTED: retrotransposon [Prunus dulcis] | [more] |
| ONI09819.1 | 3.4e-71 | 45.92 | hypothetical protein PRUPE_4G011200 [Prunus persica] | [more] |
| XP_015382226.1 | 5.1e-67 | 37.39 | uncharacterized protein LOC107175329, partial [Citrus sinensis] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G29090.1 | 7.8e-42 | 34.56 | Ribonuclease H-like superfamily protein | [more] |
| ATMG00310.1 | 3.8e-28 | 44.09 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
| AT3G09510.1 | 1.1e-19 | 27.94 | Ribonuclease H-like superfamily protein | [more] |
| AT1G33710.1 | 4.5e-05 | 27.12 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
| AT3G26855.1 | 7.7e-05 | 34.33 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
