Lcy06g011620.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy06g011620.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr06: 13632213 .. 13633232 (-)
Sequence length	582
RNA-Seq Expression	Lcy06g011620.1
Synteny	Lcy06g011620.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCAGAGCAAAGGCAAAGCTGGGATGAGGTTCAGAGATCTCCACGACTTCAACAAAGTTATGCTAGCAAAAGTTAGCTGGAGAGTCATTAAAAACCTAGACAACTTGATGTCCAAAATTTTGAGAGGAAGGTACTTCCAAGATGGGGATTTTCTTAAAGCCAAGCTAGGAAATAACCCATCCCTCACGTGGAGAAGCATCTTATGGGGTAGAGCTTTGTTCATCAAAGGGATGATATGGAAGATAGGCTCCGGAAATAGAATCATCATTGATGAAGACCTGTGGCTTGTTGAGGGAGGCGCTAAAGTCCCGTTGACTGTAAAGGAAGAGTTCAAGGGAAAAAGAATCAAGTCCATTATGAATGAAGACAGAGGATGGAATGAAGAGCTGGTGAGGGAAGCTTTTAAGCCAGAAGAAGCAAACTCCATTCTTAGCATCCAAGAGGCAAAACTGCAGCATCTAACTCTATTATTTGGGACAAGGATCGAAAGGGTGGTTTCACAGTTAGAAGCGCATACCATCTAGCTATCAGCCTCTCCGAAAGTGATGAAGCTTCAGGGTCGGATGACTCTAAAACCAAAAAGCTGTGGAATGCAATCTAGAAGCTCAAGTGCATCCTAAGGGCAAAAATTGTTGTGTGGAAGATTATTAACAATATCATCCCTACCAAAGTTAACTTAGTTAGGAGAGGAATAAATTCTACACTAGTTGTGTATTTTGCAGATCTAAGCCAGAATGGACGGAGCATGTCTTTTGGAAATGCAAATTCGCGAGACAGGTTTGGAGTTTTTTTCTTCCTAACTCATGTAAGTTTTTAAATTCCTACAGGGAGAGTTGGGGGCCGATGGATTTTTGGGAAGGGATGATCCAAAGTCTAAACAATTCAGAGCTAAACAAAGCAACCTTGATTTTGTGGTGTCTATGGAACCAACGAAATCAGAGTTATCACAACAACTAGTAGATCGACATTCATTCAACCAGAAGGAAAATCAGTATCTATTTGGAAGAATATGCTGA

mRNA sequence

ATGTGTCAGAGCAAAGGCAAAGCTGGGATGAGGTTCAGAGATCTCCACGACTTCAACAAAGTTATGCTAGCAAAAGTTAGCTGGAGAGTCATTAAAAACCTAGACAACTTGATGTCCAAAATTTTGAGAGGAAGGTACTTCCAAGATGGGGATTTTCTTAAAGCCAAGCTAGGAAATAACCCATCCCTCACGTGGAGAAGCATCTTATGGGGTAGAGCTTTGTTCATCAAAGGGATGATATGGAAGATAGGCTCCGGAAATAGAATCATCATTGATGAAGACCTGTGGCTTGTTGAGGGAGGCGCTAAAGTCCCGTTGACTGTAAAGGAAGAGTTCAAGGGAAAAAGAATCAAGTCCATTATGAATGAAGACAGAGGATGGAATGAAGAGCTGGGAGAGTTGGGGGCCGATGGATTTTTGGGAAGGGATGATCCAAAGTCTAAACAATTCAGAGCTAAACAAAGCAACCTTGATTTTGTGGTGTCTATGGAACCAACGAAATCAGAGTTATCACAACAACTAGTAGATCGACATTCATTCAACCAGAAGGAAAATCAGTATCTATTTGGAAGAATATGCTGA

Coding sequence (CDS)

ATGTGTCAGAGCAAAGGCAAAGCTGGGATGAGGTTCAGAGATCTCCACGACTTCAACAAAGTTATGCTAGCAAAAGTTAGCTGGAGAGTCATTAAAAACCTAGACAACTTGATGTCCAAAATTTTGAGAGGAAGGTACTTCCAAGATGGGGATTTTCTTAAAGCCAAGCTAGGAAATAACCCATCCCTCACGTGGAGAAGCATCTTATGGGGTAGAGCTTTGTTCATCAAAGGGATGATATGGAAGATAGGCTCCGGAAATAGAATCATCATTGATGAAGACCTGTGGCTTGTTGAGGGAGGCGCTAAAGTCCCGTTGACTGTAAAGGAAGAGTTCAAGGGAAAAAGAATCAAGTCCATTATGAATGAAGACAGAGGATGGAATGAAGAGCTGGGAGAGTTGGGGGCCGATGGATTTTTGGGAAGGGATGATCCAAAGTCTAAACAATTCAGAGCTAAACAAAGCAACCTTGATTTTGTGGTGTCTATGGAACCAACGAAATCAGAGTTATCACAACAACTAGTAGATCGACATTCATTCAACCAGAAGGAAAATCAGTATCTATTTGGAAGAATATGCTGA

Protein sequence

MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNNPSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVKEEFKGKRIKSIMNEDRGWNEELGELGADGFLGRDDPKSKQFRAKQSNLDFVVSMEPTKSELSQQLVDRHSFNQKENQYLFGRIC

Homology

[Close]

BLAST of Lcy06g011620.1 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.1e-15
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 1   MCQSK-GKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGN 60
           +C+SK    G+ FRDL  FN+ +LAK S+R+I     L+S++LR RYF     ++  +G 
Sbjct: 47  LCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGT 106

Query: 61  NPSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPL 107
            PS  WRSI+ GR L  +G++  IG G    +  D W+++     PL
Sbjct: 107 RPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153

[Close]

BLAST of Lcy06g011620.1 vs. ExPASy TrEMBL
Match: A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.2e-27
Identity = 55/131 (41.98%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 1   MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNN 60
           +CQ+KG+ G+ FRD+  FN+ ++AK SWR+IK  ++LM+KIL+ +YF+  DFL+AKLG+ 
Sbjct: 89  LCQAKGRGGLGFRDITSFNQALVAKQSWRIIKYPESLMAKILQAKYFKGADFLQAKLGSK 148

Query: 61  PSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVKEEFKGKRIKSI 120
           PS  WRSI+WGR + + GM W+IG+G+R+ I +  W+    A  P++         +  +
Sbjct: 149 PSFVWRSIIWGRQVIVNGMRWRIGTGDRVKIYKSHWIPRPQAFKPISAPTLGMDCTVAEL 208

Query: 121 MNEDRGWNEEL 132
           ++E++ W E L
Sbjct: 209 IDENQKWKESL 219

[Close]

BLAST of Lcy06g011620.1 vs. ExPASy TrEMBL
Match: A0A6J1CV63 (uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014662 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 9.4e-27
Identity = 53/105 (50.48%), Postives = 81/105 (77.14%), Query Frame = 0


Query: 1   MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNN 60
           +C SK + G+ F+DL  FN+ MLAK SW++IKN ++L+ ++LRG+YF+ G+F+ A+LG+N
Sbjct: 132 LCVSKEQGGLGFKDLCIFNQAMLAKQSWQIIKNPNSLLVRVLRGKYFKHGNFMTAELGSN 191

Query: 61  PSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVP 106
           PS  WRSILWG+ LF+KG+ W+IG+G  +II  D W++  G+ +P
Sbjct: 192 PSFVWRSILWGKELFVKGIRWRIGNGFSVIIGSDPWILREGSSLP 236

[Close]

BLAST of Lcy06g011620.1 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 8.8e-25
Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 1   MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNN 60
           +C  K   GM FRD+  FN+ MLAK SWR++++ D+L++K LRG+YF+ G FL+AKLG  
Sbjct: 509 LCIRKDLGGMGFRDISIFNQAMLAKQSWRILRHPDSLLAKTLRGKYFKTGSFLQAKLGAR 568

Query: 61  PSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVKEEFKGKRIKSI 120
           PS  WRSILWGR LF KG  WK+G+G  I +  D WL   G   P+      +   +  +
Sbjct: 569 PSYAWRSILWGRDLFKKGYRWKVGNGFSINLSSDPWLPRDGNFSPVFTHIHVRNFSVAWL 628

Query: 121 MNEDRGWNE 130
           M     W+E
Sbjct: 629 MEGRGRWDE 637

[Close]

BLAST of Lcy06g011620.1 vs. ExPASy TrEMBL
Match: A0A803PQ30 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 9.7e-24
Identity = 52/128 (40.62%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 1    MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNN 60
            +C+SK + GM FR    FN+ +LAK +WR+  N D+L+S++L+ RYF +  FL+A LG++
Sbjct: 1289 LCKSKSEGGMGFRSFIHFNQALLAKQAWRIYDNPDSLLSRVLKSRYFPNNTFLEASLGHS 1348

Query: 61   PSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVKEEFKGKRIKSI 120
            PSLTW+ I W R L +KG+ WK+G G  I  D D W+      +P   K    G  + ++
Sbjct: 1349 PSLTWQGIHWARELLLKGLRWKVGDGRHIQSDYDPWIPGHNTFLPFLYKGPSNGV-VANL 1408

Query: 121  MNEDRGWN 129
            ++++R WN
Sbjct: 1409 ISDERQWN 1415

[Close]

BLAST of Lcy06g011620.1 vs. ExPASy TrEMBL
Match: A0A803P9P5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 9.7e-24
Identity = 52/131 (39.69%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 1   MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNN 60
           +C++K + GM F+    +N+ +LAK SW +  N  +L+ KIL+ RYF+   FL+A++G+ 
Sbjct: 323 LCKAKVEGGMGFKSFVHYNQALLAKQSWFIFDNPSSLLHKILKARYFKYNTFLEAEIGSY 382

Query: 61  PSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVKEEFKGKRIKSI 120
           PSLTWRSI+WG+ L  KG+ WK+G+GN+I+   D WL    +  PL  K      ++  +
Sbjct: 383 PSLTWRSIIWGKELLTKGLRWKVGNGNQILCASDPWLPGITSFKPLIFKNPSLSMKVSEL 442

Query: 121 MNEDRGWNEEL 132
           +   R WN  L
Sbjct: 443 ITNQRQWNHSL 453

[Close]

BLAST of Lcy06g011620.1 vs. NCBI nr
Match: XP_022145148.1 (uncharacterized protein LOC111014662 [Momordica charantia])

HSP 1 Score: 130.2 bits (326), Expect = 1.9e-26
Identity = 53/105 (50.48%), Postives = 81/105 (77.14%), Query Frame = 0


Query: 1   MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNN 60
           +C SK + G+ F+DL  FN+ MLAK SW++IKN ++L+ ++LRG+YF+ G+F+ A+LG+N
Sbjct: 132 LCVSKEQGGLGFKDLCIFNQAMLAKQSWQIIKNPNSLLVRVLRGKYFKHGNFMTAELGSN 191

Query: 61  PSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVP 106
           PS  WRSILWG+ LF+KG+ W+IG+G  +II  D W++  G+ +P
Sbjct: 192 PSFVWRSILWGKELFVKGIRWRIGNGFSVIIGSDPWILREGSSLP 236

[Close]

BLAST of Lcy06g011620.1 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 1.8e-24
Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 1   MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNN 60
           +C  K   GM FRD+  FN+ MLAK SWR++++ D+L++K LRG+YF+ G FL+AKLG  
Sbjct: 509 LCIRKDLGGMGFRDISIFNQAMLAKQSWRILRHPDSLLAKTLRGKYFKTGSFLQAKLGAR 568

Query: 61  PSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVKEEFKGKRIKSI 120
           PS  WRSILWGR LF KG  WK+G+G  I +  D WL   G   P+      +   +  +
Sbjct: 569 PSYAWRSILWGRDLFKKGYRWKVGNGFSINLSSDPWLPRDGNFSPVFTHIHVRNFSVAWL 628

Query: 121 MNEDRGWNE 130
           M     W+E
Sbjct: 629 MEGRGRWDE 637

[Close]

BLAST of Lcy06g011620.1 vs. NCBI nr
Match: XP_024038343.1 (uncharacterized protein LOC112097373 [Citrus clementina])

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-24
Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 1   MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNN 60
           + Q+K + GM FRD   FN+ ++AK  WR+++  D+L++KIL+ RYFQ  DF+ A+LG+N
Sbjct: 771 LSQAKCRGGMGFRDFTSFNQALVAKQGWRILQFPDSLVAKILQARYFQHKDFMNARLGSN 830

Query: 61  PSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVKEEFKGKRIKSI 120
           PS  WRSILWGR +  KG  W+IG+G  I++ ++ WL       P++         +  +
Sbjct: 831 PSFIWRSILWGRQVISKGSKWRIGNGQSIMLHKENWLPRPLTFKPISKPSLPADALVAEL 890

Query: 121 MNEDRGWNEEL 132
           +NED  WNE L
Sbjct: 891 INEDHTWNEGL 901

[Close]

BLAST of Lcy06g011620.1 vs. NCBI nr
Match: XP_015382226.1 (uncharacterized protein LOC107175329, partial [Citrus sinensis])

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-24
Identity = 52/131 (39.69%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 1   MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNN 60
           +CQ+K + GM FRD   FN+ ++AK  WR+I++ ++LM+++L+ +YF    F++AKLG+ 
Sbjct: 454 LCQAKMRGGMGFRDFSCFNQALIAKQGWRIIQHPESLMARVLKAKYFNQSSFMEAKLGSR 513

Query: 61  PSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVKEEFKGKRIKSI 120
           PS  WRSILWGR +  KG+ WKIGSGN++ I +  WL    A  P +         +  +
Sbjct: 514 PSFVWRSILWGRQIMQKGLRWKIGSGNQVCIYKSNWLPRLEAFKPFSPPTLDIQAVVADL 573

Query: 121 MNEDRGWNEEL 132
           ++E++ W +E+
Sbjct: 574 IDENQNWKKEI 584

[Close]

BLAST of Lcy06g011620.1 vs. NCBI nr
Match: XP_030478233.1 (uncharacterized protein LOC115695298 [Cannabis sativa])

HSP 1 Score: 121.7 bits (304), Expect = 6.9e-24
Identity = 56/133 (42.11%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 1   MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNN 60
           +CQ K + GM FR    +N+ +LAK +W +  N  +L+ KIL+ RYF    FL+A+LG+ 
Sbjct: 40  LCQEKVEGGMGFRSFVHYNQALLAKQAWLIFSNPSSLVHKILKARYFNFNAFLEAELGSY 99

Query: 61  PSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVKEEFKGKRIKSI 120
           PSLTWRSILWG+ L  KG+ WK+G+GN I+     WL +  +  PL  K+     R+  +
Sbjct: 100 PSLTWRSILWGKELLCKGLRWKVGNGNHILCASGPWLPDITSFKPLMYKDSDTLMRVSDL 159

Query: 121 MNEDRGWNEELGE 134
           +  +R WN  L E
Sbjct: 160 ITSNRQWNHTLLE 172

[Close]

BLAST of Lcy06g011620.1 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-16
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 1   MCQSK-GKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGN 60
           +C+SK    G+ FRDL  FN+ +LAK S+R+I     L+S++LR RYF     ++  +G 
Sbjct: 47  LCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGT 106

Query: 61  NPSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPL 107
            PS  WRSI+ GR L  +G++  IG G    +  D W+++     PL
Sbjct: 107 RPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153

[Close]

BLAST of Lcy06g011620.1 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 3.1e-14
Identity = 36/105 (34.29%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 5   KGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNNPSLT 64
           K + G+ F+D+  FN  +L K  WR++   ++LM+K+ + RYF   D L A LG+ PS  
Sbjct: 51  KAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFV 110

Query: 65  WRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVK 110
           W+SI   + +  +G    +G+G  III    WL    A   L ++
Sbjct: 111 WKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQ 155

The following BLAST results are available for this feature:

BLAST of Lcy06g011620.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	2.1e-15	38.32	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lcy06g011620.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S8ACU2	4.2e-27	41.98	Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1	[more]
A0A6J1CV63	9.4e-27	50.48	uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1DRA0	8.8e-25	44.96	uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A803PQ30	9.7e-24	40.63	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803P9P5	9.7e-24	39.69	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Lcy06g011620.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145148.1	1.9e-26	50.48	uncharacterized protein LOC111014662 [Momordica charantia]	[more]
XP_022155286.1	1.8e-24	44.96	uncharacterized protein LOC111022423 [Momordica charantia]	[more]
XP_024038343.1	2.4e-24	41.98	uncharacterized protein LOC112097373 [Citrus clementina]	[more]
XP_015382226.1	4.0e-24	39.69	uncharacterized protein LOC107175329, partial [Citrus sinensis]	[more]
XP_030478233.1	6.9e-24	42.11	uncharacterized protein LOC115695298 [Cannabis sativa]	[more]

BLAST of Lcy06g011620.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00310.1	1.5e-16	38.32	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G29090.1	3.1e-14	34.29	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19446:SF440	SUBFAMILY NOT NAMED	coord: 1..130
None	No IPR available	PANTHER	PTHR19446	REVERSE TRANSCRIPTASES	coord: 1..130

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy06g011620	Lcy06g011620	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g011620.1.exon2	Lcy06g011620.1.exon2	exon
Lcy06g011620.1.exon1	Lcy06g011620.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy06g011620.1.cds2	Lcy06g011620.1.cds2	CDS
Lcy06g011620.1.cds1	Lcy06g011620.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy06g011620.1	Lcy06g011620.1-protein	polypeptide