Lcy06g011620 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTCAGAGCAAAGGCAAAGCTGGGATGAGGTTCAGAGATCTCCACGACTTCAACAAAGTTATGCTAGCAAAAGTTAGCTGGAGAGTCATTAAAAACCTAGACAACTTGATGTCCAAAATTTTGAGAGGAAGGTACTTCCAAGATGGGGATTTTCTTAAAGCCAAGCTAGGAAATAACCCATCCCTCACGTGGAGAAGCATCTTATGGGGTAGAGCTTTGTTCATCAAAGGGATGATATGGAAGATAGGCTCCGGAAATAGAATCATCATTGATGAAGACCTGTGGCTTGTTGAGGGAGGCGCTAAAGTCCCGTTGACTGTAAAGGAAGAGTTCAAGGGAAAAAGAATCAAGTCCATTATGAATGAAGACAGAGGATGGAATGAAGAGCTGGTGAGGGAAGCTTTTAAGCCAGAAGAAGCAAACTCCATTCTTAGCATCCAAGAGGCAAAACTGCAGCATCTAACTCTATTATTTGGGACAAGGATCGAAAGGGTGGTTTCACAGTTAGAAGCGCATACCATCTAGCTATCAGCCTCTCCGAAAGTGATGAAGCTTCAGGGTCGGATGACTCTAAAACCAAAAAGCTGTGGAATGCAATCTAGAAGCTCAAGTGCATCCTAAGGGCAAAAATTGTTGTGTGGAAGATTATTAACAATATCATCCCTACCAAAGTTAACTTAGTTAGGAGAGGAATAAATTCTACACTAGTTGTGTATTTTGCAGATCTAAGCCAGAATGGACGGAGCATGTCTTTTGGAAATGCAAATTCGCGAGACAGGTTTGGAGTTTTTTTCTTCCTAACTCATGTAAGTTTTTAAATTCCTACAGGGAGAGTTGGGGGCCGATGGATTTTTGGGAAGGGATGATCCAAAGTCTAAACAATTCAGAGCTAAACAAAGCAACCTTGATTTTGTGGTGTCTATGGAACCAACGAAATCAGAGTTATCACAACAACTAGTAGATCGACATTCATTCAACCAGAAGGAAAATCAGTATCTATTTGGAAGAATATGCTGA ATGTGTCAGAGCAAAGGCAAAGCTGGGATGAGGTTCAGAGATCTCCACGACTTCAACAAAGTTATGCTAGCAAAAGTTAGCTGGAGAGTCATTAAAAACCTAGACAACTTGATGTCCAAAATTTTGAGAGGAAGGTACTTCCAAGATGGGGATTTTCTTAAAGCCAAGCTAGGAAATAACCCATCCCTCACGTGGAGAAGCATCTTATGGGGTAGAGCTTTGTTCATCAAAGGGATGATATGGAAGATAGGCTCCGGAAATAGAATCATCATTGATGAAGACCTGTGGCTTGTTGAGGGAGGCGCTAAAGTCCCGTTGACTGTAAAGGAAGAGTTCAAGGGAAAAAGAATCAAGTCCATTATGAATGAAGACAGAGGATGGAATGAAGAGCTGGGAGAGTTGGGGGCCGATGGATTTTTGGGAAGGGATGATCCAAAGTCTAAACAATTCAGAGCTAAACAAAGCAACCTTGATTTTGTGGTGTCTATGGAACCAACGAAATCAGAGTTATCACAACAACTAGTAGATCGACATTCATTCAACCAGAAGGAAAATCAGTATCTATTTGGAAGAATATGCTGA ATGTGTCAGAGCAAAGGCAAAGCTGGGATGAGGTTCAGAGATCTCCACGACTTCAACAAAGTTATGCTAGCAAAAGTTAGCTGGAGAGTCATTAAAAACCTAGACAACTTGATGTCCAAAATTTTGAGAGGAAGGTACTTCCAAGATGGGGATTTTCTTAAAGCCAAGCTAGGAAATAACCCATCCCTCACGTGGAGAAGCATCTTATGGGGTAGAGCTTTGTTCATCAAAGGGATGATATGGAAGATAGGCTCCGGAAATAGAATCATCATTGATGAAGACCTGTGGCTTGTTGAGGGAGGCGCTAAAGTCCCGTTGACTGTAAAGGAAGAGTTCAAGGGAAAAAGAATCAAGTCCATTATGAATGAAGACAGAGGATGGAATGAAGAGCTGGGAGAGTTGGGGGCCGATGGATTTTTGGGAAGGGATGATCCAAAGTCTAAACAATTCAGAGCTAAACAAAGCAACCTTGATTTTGTGGTGTCTATGGAACCAACGAAATCAGAGTTATCACAACAACTAGTAGATCGACATTCATTCAACCAGAAGGAAAATCAGTATCTATTTGGAAGAATATGCTGA MCQSKGKAGMRFRDLHDFNKVMLAKVSWRVIKNLDNLMSKILRGRYFQDGDFLKAKLGNNPSLTWRSILWGRALFIKGMIWKIGSGNRIIIDEDLWLVEGGAKVPLTVKEEFKGKRIKSIMNEDRGWNEELGELGADGFLGRDDPKSKQFRAKQSNLDFVVSMEPTKSELSQQLVDRHSFNQKENQYLFGRIC Homology
BLAST of Lcy06g011620 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.1e-15 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 0
BLAST of Lcy06g011620 vs. ExPASy TrEMBL
Match: A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.2e-27 Identity = 55/131 (41.98%), Postives = 89/131 (67.94%), Query Frame = 0
BLAST of Lcy06g011620 vs. ExPASy TrEMBL
Match: A0A6J1CV63 (uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014662 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 9.4e-27 Identity = 53/105 (50.48%), Postives = 81/105 (77.14%), Query Frame = 0
BLAST of Lcy06g011620 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 8.8e-25 Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = 0
BLAST of Lcy06g011620 vs. ExPASy TrEMBL
Match: A0A803PQ30 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 9.7e-24 Identity = 52/128 (40.62%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of Lcy06g011620 vs. ExPASy TrEMBL
Match: A0A803P9P5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 9.7e-24 Identity = 52/131 (39.69%), Postives = 81/131 (61.83%), Query Frame = 0
BLAST of Lcy06g011620 vs. NCBI nr
Match: XP_022145148.1 (uncharacterized protein LOC111014662 [Momordica charantia]) HSP 1 Score: 130.2 bits (326), Expect = 1.9e-26 Identity = 53/105 (50.48%), Postives = 81/105 (77.14%), Query Frame = 0
BLAST of Lcy06g011620 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia]) HSP 1 Score: 123.6 bits (309), Expect = 1.8e-24 Identity = 58/129 (44.96%), Postives = 79/129 (61.24%), Query Frame = 0
BLAST of Lcy06g011620 vs. NCBI nr
Match: XP_024038343.1 (uncharacterized protein LOC112097373 [Citrus clementina]) HSP 1 Score: 123.2 bits (308), Expect = 2.4e-24 Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 0
BLAST of Lcy06g011620 vs. NCBI nr
Match: XP_015382226.1 (uncharacterized protein LOC107175329, partial [Citrus sinensis]) HSP 1 Score: 122.5 bits (306), Expect = 4.0e-24 Identity = 52/131 (39.69%), Postives = 85/131 (64.89%), Query Frame = 0
BLAST of Lcy06g011620 vs. NCBI nr
Match: XP_030478233.1 (uncharacterized protein LOC115695298 [Cannabis sativa]) HSP 1 Score: 121.7 bits (304), Expect = 6.9e-24 Identity = 56/133 (42.11%), Postives = 81/133 (60.90%), Query Frame = 0
BLAST of Lcy06g011620 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 84.0 bits (206), Expect = 1.5e-16 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 0
BLAST of Lcy06g011620 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 3.1e-14 Identity = 36/105 (34.29%), Postives = 57/105 (54.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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