Lcy04g008800.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy04g008800.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Late embryogenesis abundant protein
Location	Chr04: 39929097 .. 39930314 (+)
Sequence length	667
RNA-Seq Expression	Lcy04g008800.1
Synteny	Lcy04g008800.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGATGACGCTCGTGATGTATTCCAAGTCCAACAGGTCGACGGAAGCTCCAGTCAGCACGTTAACCACTTCGAGAGCATTCGACTCGATTTCCAGGTAGATTTTCCTTCGAATGCAGGTATCAATTACATGCTTGAGCCCTTCTAAAATAGCCTCTGCTCCAAGTTTAAAGTTAATATTATTGCACCACTATCATCGAAGTTTGAGATGTGTAAGTTGATAAAACTGAAAGTTTTGAGTAAGATCAATCAACTTGATAAATTTAGGAGTAAAAAATTGATTTACGTGTCGACACAATGCATCAAGACGACAGTTTTAGTGACGTGTCCTCGAGAAATTGCTCGTTCGCACCCCAATTTGCCGCGTTTGCCTTATTACGTGTCCATTCTACAAGCTCTTTCGTCACCAGAGCTCTTCCCATTCTCCTGCTTATAAAAACCATCACAAACTTTGCAATCCACCATCAACTTTATAAAAAATTTGGGTTCTCTGATTTTCTGCAGAAGAAGAAGAAGAAGAAGAATGGCATCGCAACAACAGGACAGATCGGAGCTCGACACTAAAGCCAAGCAAGGAGAGACTGTGGTTCCCGGCGGAACCGGCGGCAAAAGCCTCGAAGCTCAAGAACGCCTCGCTGAAGGTTACATACACATAAACTCAATAATTCTCTTCTTCAAGTTCAAACATTACTAAGCTAGCTAGCCTTCTCTCTTTACATTATATATTCCAGTTTGATTTTGATTTCTTATTTTCTTTTCGTCGTTTTGGTGGTGGCGGCGCGAAGGGCGGAGCCGGGGCGGGCAGACAAGGAAGGAGCAATTGGGGCACGAGGGGTATCAGGAGCTGGGGCACAAGGGAGGAGAGACGAGAAGGGAGCAGATGGGCCAAGAAGGGTACCAAGAGATGGGCCGGAAAGGAGGGCTCAGCACCATGGAGAAGTCCGGCGGAGAGCGCGCGGCGGAGGAAGGGATCGAGATCGACGAGTCCAAGTTTAGGACCAAGGACCGTTAGCCGGAGCTTGGCGATGATCCGGCCGGTCAACGTTTTTATAAATTAGCTGACTAAAATAAACGTGTGTTTGTTTTCGTATTATATATGTAATTTATGGTTGGTTTTGTAATTTGAAATTTCTTTTGTTAGTTTTTTTCTTTGGGACACGTGTATGCCGGCCGGCGACCTCTTGTCGGTCGTTTTGGCTGCCGGCTCTTTGCCG

mRNA sequence

ATGGCGGAGATGACGCTCGTGATGTATTCCAAGTCCAACAGGTCGACGGAAGCTCCAGTCAGCACGTTAACCACTTCGAGAGCATTCGACTCGATTTCCAGAAGAAGAAGAAGAAGAAGAATGGCATCGCAACAACAGGACAGATCGGAGCTCGACACTAAAGCCAAGCAAGGAGAGACTGTGGTTCCCGGCGGAACCGGCGGCAAAAGCCTCGAAGCTCAAGAACGCCTCGCTGAAGGGCGGAGCCGGGGCGGGCAGACAAGGAAGGAGCAATTGGGGCACGAGGGGTATCAGGAGCTGGGGCACAAGGGAGGAGAGACGAGAAGGGAGCAGATGGGCCAAGAAGGGTACCAAGAGATGGGCCGGAAAGGAGGGCTCAGCACCATGGAGAAGTCCGGCGGAGAGCGCGCGGCGGAGGAAGGGATCGAGATCGACGAGTCCAAGTTTAGGACCAAGGACCGTTAGCCGGAGCTTGGCGATGATCCGGCCGGTCAACGTTTTTATAAATTAGCTGACTAAAATAAACGTGTGTTTGTTTTCGTATTATATATGTAATTTATGGTTGGTTTTGTAATTTGAAATTTCTTTTGTTAGTTTTTTTCTTTGGGACACGTGTATGCCGGCCGGCGACCTCTTGTCGGTCGTTTTGGCTGCCGGCTCTTTGCCG

Coding sequence (CDS)

ATGGCGGAGATGACGCTCGTGATGTATTCCAAGTCCAACAGGTCGACGGAAGCTCCAGTCAGCACGTTAACCACTTCGAGAGCATTCGACTCGATTTCCAGAAGAAGAAGAAGAAGAAGAATGGCATCGCAACAACAGGACAGATCGGAGCTCGACACTAAAGCCAAGCAAGGAGAGACTGTGGTTCCCGGCGGAACCGGCGGCAAAAGCCTCGAAGCTCAAGAACGCCTCGCTGAAGGGCGGAGCCGGGGCGGGCAGACAAGGAAGGAGCAATTGGGGCACGAGGGGTATCAGGAGCTGGGGCACAAGGGAGGAGAGACGAGAAGGGAGCAGATGGGCCAAGAAGGGTACCAAGAGATGGGCCGGAAAGGAGGGCTCAGCACCATGGAGAAGTCCGGCGGAGAGCGCGCGGCGGAGGAAGGGATCGAGATCGACGAGTCCAAGTTTAGGACCAAGGACCGTTAG

Protein sequence

MAEMTLVMYSKSNRSTEAPVSTLTTSRAFDSISRRRRRRRMASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQELGHKGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR

Homology

[Close]

BLAST of Lcy04g008800.1 vs. ExPASy Swiss-Prot
Match: I1N2Z5 (Protein SLE1 OS=Glycine max OX=3847 GN=SLE1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.0e-42
Identity = 92/110 (83.64%), Postives = 101/110 (91.82%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEL 100
           M SQQ +R ELD KA+QGETVVPGGTGGKSLEAQE LAEGRSRGGQTRK+QLG EGY E+
Sbjct: 1   MESQQANREELDEKARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKQQLGSEGYHEM 60

Query: 101 GHKGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFR 151
           G KGG+TR+EQMG+EGYQEMGRKGGLSTM+KSGGERA EEGIEIDESKF+
Sbjct: 61  GTKGGQTRKEQMGREGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESKFK 110

[Close]

BLAST of Lcy04g008800.1 vs. ExPASy Swiss-Prot
Match: Q5KTS7 (Carrot ABA-induced in somatic embryos 3 OS=Daucus carota OX=4039 GN=CAISE3 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-40
Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEL 100
           MAS Q+ RSELD +AKQGETVVPGGTGGKSLEAQE LAEGRS+GG TRKEQLG EGYQE+
Sbjct: 1   MASGQEKRSELDARAKQGETVVPGGTGGKSLEAQEHLAEGRSKGGHTRKEQLGTEGYQEI 60

Query: 101 GHKGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTK 153
           G KGGETRREQMG+EGY++MGR GGL+T +KSG ERA EEGI+ID+SKFRTK
Sbjct: 61  GTKGGETRREQMGKEGYEQMGRMGGLATKDKSGAERAEEEGIDIDQSKFRTK 112

[Close]

BLAST of Lcy04g008800.1 vs. ExPASy Swiss-Prot
Match: Q02400 (Late embryogenesis abundant protein B19.3 OS=Hordeum vulgare OX=4513 GN=B19.3 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.3e-40
Identity = 94/132 (71.21%), Postives = 105/132 (79.55%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQ-------------- 100
           MAS QQ+RSELD  A++GETVVPGGTGGK+LEAQE LAEGRSRGGQ              
Sbjct: 1   MASGQQERSELDRMAREGETVVPGGTGGKTLEAQEHLAEGRSRGGQTRKDQLGEEGYREM 60

Query: 101 ------TRKEQLGHEGYQELGHKGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEE 153
                 TRKEQLG EGY+E+GHKGGETR+EQMG+EGY EMGRKGGLSTME+SGGERAA E
Sbjct: 61  GHKGGETRKEQLGEEGYREMGHKGGETRKEQMGEEGYHEMGRKGGLSTMEESGGERAARE 120

[Close]

BLAST of Lcy04g008800.1 vs. ExPASy Swiss-Prot
Match: Q07187 (Em-like protein GEA1 OS=Arabidopsis thaliana OX=3702 GN=EM1 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.1e-38
Identity = 96/152 (63.16%), Postives = 101/152 (66.45%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEL 100
           MAS+Q  R ELD KAKQGETVVPGGTGG SLEAQE LAEGRS+GGQTRKEQLGHEGYQE+
Sbjct: 1   MASKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEI 60

Query: 101 GHKGGETRREQMGQEGYQ----------------------------------------EM 153
           GHKGGE R+EQ+G EGYQ                                        EM
Sbjct: 61  GHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYKEM 120

[Close]

BLAST of Lcy04g008800.1 vs. ExPASy Swiss-Prot
Match: Q05191 (Late embryogenesis abundant protein B19.4 OS=Hordeum vulgare OX=4513 GN=B19.4 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-37
Identity = 93/152 (61.18%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQ-------------- 100
           MAS QQ+RSELD  A++GETVVPGGTGGK+LEAQE LAEGRSRGGQ              
Sbjct: 1   MASGQQERSELDRMAREGETVVPGGTGGKTLEAQEHLAEGRSRGGQTRKEQLGEEGYREM 60

Query: 101 --------------------------TRKEQLGHEGYQELGHKGGETRREQMGQEGYQEM 153
                                     TRKEQLG EGY+E+GHKGGETR+EQMG+EGY+EM
Sbjct: 61  GHKGGETRKEQLGEEGYREMGHKGGETRKEQLGEEGYREMGHKGGETRKEQMGEEGYREM 120

[Close]

BLAST of Lcy04g008800.1 vs. ExPASy TrEMBL
Match: A0A6J1GDL3 (carrot ABA-induced in somatic embryos 3 OS=Cucurbita moschata OX=3662 GN=LOC111453221 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.0e-44
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 45  QQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQELGHKG 104
           QQ+RSEL+ KAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQE+GH+G
Sbjct: 4   QQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEMGHRG 63

Query: 105 GETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR 155
           GETRREQMGQEGYQEMG+KGGLSTM+KS  ER  EEGIEIDESKFRTKDR
Sbjct: 64  GETRREQMGQEGYQEMGKKGGLSTMDKSAAERVEEEGIEIDESKFRTKDR 113

[Close]

BLAST of Lcy04g008800.1 vs. ExPASy TrEMBL
Match: A0A5D3E0M2 (Protein SLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00010 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 5.2e-44
Identity = 102/114 (89.47%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEL 100
           MASQQQ RSELD KAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLGHEGYQEL
Sbjct: 1   MASQQQ-RSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYQEL 60

Query: 101 GHKGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR 155
           GH+GGE R+EQMGQEGYQEMGRKGGLSTM+KSGGERA EEGIEIDES+F TK+R
Sbjct: 61  GHQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of Lcy04g008800.1 vs. ExPASy TrEMBL
Match: A0A5A7T8F9 (Protein SLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00540 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-43
Identity = 101/114 (88.60%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEL 100
           MASQQQ RSELD KAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLGHEGY+EL
Sbjct: 1   MASQQQ-RSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYEEL 60

Query: 101 GHKGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR 155
           GH+GGE R+EQMGQEGYQEMGRKGGLSTM+KSGGERA EEGIEIDES+F TK+R
Sbjct: 61  GHQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of Lcy04g008800.1 vs. ExPASy TrEMBL
Match: A0A1S3CMG8 (protein SLE1 OS=Cucumis melo OX=3656 GN=LOC103502145 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-43
Identity = 101/114 (88.60%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEL 100
           MASQQQ RSELD KAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLGHEGY+EL
Sbjct: 1   MASQQQ-RSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYEEL 60

Query: 101 GHKGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR 155
           GH+GGE R+EQMGQEGYQEMGRKGGLSTM+KSGGERA EEGIEIDES+F TK+R
Sbjct: 61  GHQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of Lcy04g008800.1 vs. ExPASy TrEMBL
Match: A0A6J1IMD5 (carrot ABA-induced in somatic embryos 3 OS=Cucurbita maxima OX=3661 GN=LOC111478342 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.0e-43
Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 45  QQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQELGHKG 104
           QQ+RSEL+ KAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLG+EGYQE+GH+G
Sbjct: 4   QQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMGHRG 63

Query: 105 GETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR 155
           GETRREQMGQEGYQEMG+KGGLSTM+KS  ER  EEGIEIDESKFRTKDR
Sbjct: 64  GETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 113

[Close]

BLAST of Lcy04g008800.1 vs. NCBI nr
Match: XP_038883209.1 (protein SLE1-like [Benincasa hispida])

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-44
Identity = 102/112 (91.07%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 43  SQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQELGH 102
           + QQ+RSELD KAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLG EGYQELGH
Sbjct: 2   ASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGQEGYQELGH 61

Query: 103 KGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR 155
           +GGE RREQ+G EGYQEMGRKGGLSTM+KSGGERAAEEGIEIDESKFRTKDR
Sbjct: 62  QGGEARREQIGHEGYQEMGRKGGLSTMDKSGGERAAEEGIEIDESKFRTKDR 113

[Close]

BLAST of Lcy04g008800.1 vs. NCBI nr
Match: XP_022949995.1 (carrot ABA-induced in somatic embryos 3 [Cucurbita moschata] >XP_022949996.1 carrot ABA-induced in somatic embryos 3 [Cucurbita moschata] >XP_023544726.1 carrot ABA-induced in somatic embryos 3 [Cucurbita pepo subsp. pepo] >KAG6603575.1 Carrot ABA-induced in somatic embryos 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.6 bits (475), Expect = 8.2e-44
Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 45  QQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQELGHKG 104
           QQ+RSEL+ KAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQE+GH+G
Sbjct: 4   QQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEMGHRG 63

Query: 105 GETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR 155
           GETRREQMGQEGYQEMG+KGGLSTM+KS  ER  EEGIEIDESKFRTKDR
Sbjct: 64  GETRREQMGQEGYQEMGKKGGLSTMDKSAAERVEEEGIEIDESKFRTKDR 113

[Close]

BLAST of Lcy04g008800.1 vs. NCBI nr
Match: TYK29241.1 (protein SLE1 [Cucumis melo var. makuwa])

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43
Identity = 102/114 (89.47%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEL 100
           MASQQQ RSELD KAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLGHEGYQEL
Sbjct: 1   MASQQQ-RSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYQEL 60

Query: 101 GHKGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR 155
           GH+GGE R+EQMGQEGYQEMGRKGGLSTM+KSGGERA EEGIEIDES+F TK+R
Sbjct: 61  GHQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of Lcy04g008800.1 vs. NCBI nr
Match: XP_008464211.1 (PREDICTED: protein SLE1 [Cucumis melo] >KAA0037755.1 protein SLE1 [Cucumis melo var. makuwa])

HSP 1 Score: 186.0 bits (471), Expect = 2.4e-43
Identity = 101/114 (88.60%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEL 100
           MASQQQ RSELD KAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLGHEGY+EL
Sbjct: 1   MASQQQ-RSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYEEL 60

Query: 101 GHKGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR 155
           GH+GGE R+EQMGQEGYQEMGRKGGLSTM+KSGGERA EEGIEIDES+F TK+R
Sbjct: 61  GHQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of Lcy04g008800.1 vs. NCBI nr
Match: XP_022978321.1 (carrot ABA-induced in somatic embryos 3 [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 4.1e-43
Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 45  QQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQELGHKG 104
           QQ+RSEL+ KAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLG+EGYQE+GH+G
Sbjct: 4   QQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMGHRG 63

Query: 105 GETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR 155
           GETRREQMGQEGYQEMG+KGGLSTM+KS  ER  EEGIEIDESKFRTKDR
Sbjct: 64  GETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 113

[Close]

BLAST of Lcy04g008800.1 vs. TAIR 10
Match: AT3G51810.1 (Stress induced protein )

HSP 1 Score: 159.1 bits (401), Expect = 2.9e-39
Identity = 96/152 (63.16%), Postives = 101/152 (66.45%), Query Frame = 0


Query: 41  MASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQEL 100
           MAS+Q  R ELD KAKQGETVVPGGTGG SLEAQE LAEGRS+GGQTRKEQLGHEGYQE+
Sbjct: 1   MASKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEI 60

Query: 101 GHKGGETRREQMGQEGYQ----------------------------------------EM 153
           GHKGGE R+EQ+G EGYQ                                        EM
Sbjct: 61  GHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYKEM 120

[Close]

BLAST of Lcy04g008800.1 vs. TAIR 10
Match: AT2G40170.1 (Stress induced protein )

HSP 1 Score: 121.7 bits (304), Expect = 5.1e-28
Identity = 70/110 (63.64%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 43  SQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQELGH 102
           + QQ++ +LD +AK+GETVVPGGTGGKS EAQ+ LAEGRSRGGQTRKEQL          
Sbjct: 2   ASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQL---------- 61

Query: 103 KGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTK 153
                     G EGYQ+MGRKGGLST +K GGE A EEG+EIDESKFRTK
Sbjct: 62  ----------GTEGYQQMGRKGGLSTGDKPGGEHAEEEGVEIDESKFRTK 91

The following BLAST results are available for this feature:

BLAST of Lcy04g008800.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
I1N2Z5	8.0e-42	83.64	Protein SLE1 OS=Glycine max OX=3847 GN=SLE1 PE=2 SV=1	[more]
Q5KTS7	1.5e-40	80.36	Carrot ABA-induced in somatic embryos 3 OS=Daucus carota OX=4039 GN=CAISE3 PE=2 ...	[more]
Q02400	3.3e-40	71.21	Late embryogenesis abundant protein B19.3 OS=Hordeum vulgare OX=4513 GN=B19.3 PE...	[more]
Q07187	4.1e-38	63.16	Em-like protein GEA1 OS=Arabidopsis thaliana OX=3702 GN=EM1 PE=2 SV=1	[more]
Q05191	2.0e-37	61.18	Late embryogenesis abundant protein B19.4 OS=Hordeum vulgare OX=4513 GN=B19.4 PE...	[more]

BLAST of Lcy04g008800.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDL3	4.0e-44	90.00	carrot ABA-induced in somatic embryos 3 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A5D3E0M2	5.2e-44	89.47	Protein SLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00010 ...	[more]
A0A5A7T8F9	1.2e-43	88.60	Protein SLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00540 P...	[more]
A0A1S3CMG8	1.2e-43	88.60	protein SLE1 OS=Cucumis melo OX=3656 GN=LOC103502145 PE=3 SV=1	[more]
A0A6J1IMD5	2.0e-43	89.09	carrot ABA-induced in somatic embryos 3 OS=Cucurbita maxima OX=3661 GN=LOC111478...	[more]

BLAST of Lcy04g008800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883209.1	1.3e-44	91.07	protein SLE1-like [Benincasa hispida]	[more]
XP_022949995.1	8.2e-44	90.00	carrot ABA-induced in somatic embryos 3 [Cucurbita moschata] >XP_022949996.1 car...	[more]
TYK29241.1	1.1e-43	89.47	protein SLE1 [Cucumis melo var. makuwa]	[more]
XP_008464211.1	2.4e-43	88.60	PREDICTED: protein SLE1 [Cucumis melo] >KAA0037755.1 protein SLE1 [Cucumis melo ...	[more]
XP_022978321.1	4.1e-43	89.09	carrot ABA-induced in somatic embryos 3 [Cucurbita maxima]	[more]

BLAST of Lcy04g008800.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51810.1	2.9e-39	63.16	Stress induced protein	[more]
AT2G40170.1	5.1e-28	63.64	Stress induced protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038956	Late embryogenesis abundant protein, LEA_5 subgroup	PFAM	PF00477	LEA_5	coord: 41..149 e-value: 2.0E-58 score: 195.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..29
None	No IPR available	PANTHER	PTHR34671:SF19	EMBRYONIC ABUNDANT PROTEIN 1	coord: 103..152
None	No IPR available	PANTHER	PTHR34671:SF19	EMBRYONIC ABUNDANT PROTEIN 1	coord: 41..105
IPR000389	Small hydrophilic plant seed protein	PANTHER	PTHR34671	EM-LIKE PROTEIN GEA1	coord: 103..152
IPR000389	Small hydrophilic plant seed protein	PANTHER	PTHR34671	EM-LIKE PROTEIN GEA1	coord: 41..105
IPR022377	Small hydrophilic plant seed protein, conserved site	PROSITE	PS00431	SMALL_HYDR_PLANT_SEED	coord: 58..66

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy04g008800	Lcy04g008800	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy04g008800.1.exon1	Lcy04g008800.1.exon1	exon
Lcy04g008800.1.exon2	Lcy04g008800.1.exon2	exon
Lcy04g008800.1.exon3	Lcy04g008800.1.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy04g008800.1.cds1	Lcy04g008800.1.cds1	CDS
Lcy04g008800.1.cds2	Lcy04g008800.1.cds2	CDS
Lcy04g008800.1.cds3	Lcy04g008800.1.cds3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy04g008800.1.utr3p1	Lcy04g008800.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy04g008800.1	Lcy04g008800.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009737	response to abscisic acid