Lcy04g008800 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAGATGACGCTCGTGATGTATTCCAAGTCCAACAGGTCGACGGAAGCTCCAGTCAGCACGTTAACCACTTCGAGAGCATTCGACTCGATTTCCAGGTAGATTTTCCTTCGAATGCAGGTATCAATTACATGCTTGAGCCCTTCTAAAATAGCCTCTGCTCCAAGTTTAAAGTTAATATTATTGCACCACTATCATCGAAGTTTGAGATGTGTAAGTTGATAAAACTGAAAGTTTTGAGTAAGATCAATCAACTTGATAAATTTAGGAGTAAAAAATTGATTTACGTGTCGACACAATGCATCAAGACGACAGTTTTAGTGACGTGTCCTCGAGAAATTGCTCGTTCGCACCCCAATTTGCCGCGTTTGCCTTATTACGTGTCCATTCTACAAGCTCTTTCGTCACCAGAGCTCTTCCCATTCTCCTGCTTATAAAAACCATCACAAACTTTGCAATCCACCATCAACTTTATAAAAAATTTGGGTTCTCTGATTTTCTGCAGAAGAAGAAGAAGAAGAAGAATGGCATCGCAACAACAGGACAGATCGGAGCTCGACACTAAAGCCAAGCAAGGAGAGACTGTGGTTCCCGGCGGAACCGGCGGCAAAAGCCTCGAAGCTCAAGAACGCCTCGCTGAAGGTTACATACACATAAACTCAATAATTCTCTTCTTCAAGTTCAAACATTACTAAGCTAGCTAGCCTTCTCTCTTTACATTATATATTCCAGTTTGATTTTGATTTCTTATTTTCTTTTCGTCGTTTTGGTGGTGGCGGCGCGAAGGGCGGAGCCGGGGCGGGCAGACAAGGAAGGAGCAATTGGGGCACGAGGGGTATCAGGAGCTGGGGCACAAGGGAGGAGAGACGAGAAGGGAGCAGATGGGCCAAGAAGGGTACCAAGAGATGGGCCGGAAAGGAGGGCTCAGCACCATGGAGAAGTCCGGCGGAGAGCGCGCGGCGGAGGAAGGGATCGAGATCGACGAGTCCAAGTTTAGGACCAAGGACCGTTAGCCGGAGCTTGGCGATGATCCGGCCGGTCAACGTTTTTATAAATTAGCTGACTAAAATAAACGTGTGTTTGTTTTCGTATTATATATGTAATTTATGGTTGGTTTTGTAATTTGAAATTTCTTTTGTTAGTTTTTTTCTTTGGGACACGTGTATGCCGGCCGGCGACCTCTTGTCGGTCGTTTTGGCTGCCGGCTCTTTGCCG ATGGCGGAGATGACGCTCGTGATGTATTCCAAGTCCAACAGGTCGACGGAAGCTCCAGTCAGCACGTTAACCACTTCGAGAGCATTCGACTCGATTTCCAGAAGAAGAAGAAGAAGAAGAATGGCATCGCAACAACAGGACAGATCGGAGCTCGACACTAAAGCCAAGCAAGGAGAGACTGTGGTTCCCGGCGGAACCGGCGGCAAAAGCCTCGAAGCTCAAGAACGCCTCGCTGAAGGGCGGAGCCGGGGCGGGCAGACAAGGAAGGAGCAATTGGGGCACGAGGGGTATCAGGAGCTGGGGCACAAGGGAGGAGAGACGAGAAGGGAGCAGATGGGCCAAGAAGGGTACCAAGAGATGGGCCGGAAAGGAGGGCTCAGCACCATGGAGAAGTCCGGCGGAGAGCGCGCGGCGGAGGAAGGGATCGAGATCGACGAGTCCAAGTTTAGGACCAAGGACCGTTAGCCGGAGCTTGGCGATGATCCGGCCGGTCAACGTTTTTATAAATTAGCTGACTAAAATAAACGTGTGTTTGTTTTCGTATTATATATGTAATTTATGGTTGGTTTTGTAATTTGAAATTTCTTTTGTTAGTTTTTTTCTTTGGGACACGTGTATGCCGGCCGGCGACCTCTTGTCGGTCGTTTTGGCTGCCGGCTCTTTGCCG ATGGCGGAGATGACGCTCGTGATGTATTCCAAGTCCAACAGGTCGACGGAAGCTCCAGTCAGCACGTTAACCACTTCGAGAGCATTCGACTCGATTTCCAGAAGAAGAAGAAGAAGAAGAATGGCATCGCAACAACAGGACAGATCGGAGCTCGACACTAAAGCCAAGCAAGGAGAGACTGTGGTTCCCGGCGGAACCGGCGGCAAAAGCCTCGAAGCTCAAGAACGCCTCGCTGAAGGGCGGAGCCGGGGCGGGCAGACAAGGAAGGAGCAATTGGGGCACGAGGGGTATCAGGAGCTGGGGCACAAGGGAGGAGAGACGAGAAGGGAGCAGATGGGCCAAGAAGGGTACCAAGAGATGGGCCGGAAAGGAGGGCTCAGCACCATGGAGAAGTCCGGCGGAGAGCGCGCGGCGGAGGAAGGGATCGAGATCGACGAGTCCAAGTTTAGGACCAAGGACCGTTAG MAEMTLVMYSKSNRSTEAPVSTLTTSRAFDSISRRRRRRRMASQQQDRSELDTKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGHEGYQELGHKGGETRREQMGQEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTKDR Homology
BLAST of Lcy04g008800 vs. ExPASy Swiss-Prot
Match: I1N2Z5 (Protein SLE1 OS=Glycine max OX=3847 GN=SLE1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 8.0e-42 Identity = 92/110 (83.64%), Postives = 101/110 (91.82%), Query Frame = 0
BLAST of Lcy04g008800 vs. ExPASy Swiss-Prot
Match: Q5KTS7 (Carrot ABA-induced in somatic embryos 3 OS=Daucus carota OX=4039 GN=CAISE3 PE=2 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.5e-40 Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of Lcy04g008800 vs. ExPASy Swiss-Prot
Match: Q02400 (Late embryogenesis abundant protein B19.3 OS=Hordeum vulgare OX=4513 GN=B19.3 PE=2 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 3.3e-40 Identity = 94/132 (71.21%), Postives = 105/132 (79.55%), Query Frame = 0
BLAST of Lcy04g008800 vs. ExPASy Swiss-Prot
Match: Q07187 (Em-like protein GEA1 OS=Arabidopsis thaliana OX=3702 GN=EM1 PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 4.1e-38 Identity = 96/152 (63.16%), Postives = 101/152 (66.45%), Query Frame = 0
BLAST of Lcy04g008800 vs. ExPASy Swiss-Prot
Match: Q05191 (Late embryogenesis abundant protein B19.4 OS=Hordeum vulgare OX=4513 GN=B19.4 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.0e-37 Identity = 93/152 (61.18%), Postives = 105/152 (69.08%), Query Frame = 0
BLAST of Lcy04g008800 vs. ExPASy TrEMBL
Match: A0A6J1GDL3 (carrot ABA-induced in somatic embryos 3 OS=Cucurbita moschata OX=3662 GN=LOC111453221 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 4.0e-44 Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of Lcy04g008800 vs. ExPASy TrEMBL
Match: A0A5D3E0M2 (Protein SLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00010 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 5.2e-44 Identity = 102/114 (89.47%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Lcy04g008800 vs. ExPASy TrEMBL
Match: A0A5A7T8F9 (Protein SLE1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00540 PE=3 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.2e-43 Identity = 101/114 (88.60%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Lcy04g008800 vs. ExPASy TrEMBL
Match: A0A1S3CMG8 (protein SLE1 OS=Cucumis melo OX=3656 GN=LOC103502145 PE=3 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.2e-43 Identity = 101/114 (88.60%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Lcy04g008800 vs. ExPASy TrEMBL
Match: A0A6J1IMD5 (carrot ABA-induced in somatic embryos 3 OS=Cucurbita maxima OX=3661 GN=LOC111478342 PE=3 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 2.0e-43 Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of Lcy04g008800 vs. NCBI nr
Match: XP_038883209.1 (protein SLE1-like [Benincasa hispida]) HSP 1 Score: 190.3 bits (482), Expect = 1.3e-44 Identity = 102/112 (91.07%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Lcy04g008800 vs. NCBI nr
Match: XP_022949995.1 (carrot ABA-induced in somatic embryos 3 [Cucurbita moschata] >XP_022949996.1 carrot ABA-induced in somatic embryos 3 [Cucurbita moschata] >XP_023544726.1 carrot ABA-induced in somatic embryos 3 [Cucurbita pepo subsp. pepo] >KAG6603575.1 Carrot ABA-induced in somatic embryos 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 187.6 bits (475), Expect = 8.2e-44 Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of Lcy04g008800 vs. NCBI nr
Match: TYK29241.1 (protein SLE1 [Cucumis melo var. makuwa]) HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43 Identity = 102/114 (89.47%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Lcy04g008800 vs. NCBI nr
Match: XP_008464211.1 (PREDICTED: protein SLE1 [Cucumis melo] >KAA0037755.1 protein SLE1 [Cucumis melo var. makuwa]) HSP 1 Score: 186.0 bits (471), Expect = 2.4e-43 Identity = 101/114 (88.60%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Lcy04g008800 vs. NCBI nr
Match: XP_022978321.1 (carrot ABA-induced in somatic embryos 3 [Cucurbita maxima]) HSP 1 Score: 185.3 bits (469), Expect = 4.1e-43 Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of Lcy04g008800 vs. TAIR 10
Match: AT3G51810.1 (Stress induced protein ) HSP 1 Score: 159.1 bits (401), Expect = 2.9e-39 Identity = 96/152 (63.16%), Postives = 101/152 (66.45%), Query Frame = 0
BLAST of Lcy04g008800 vs. TAIR 10
Match: AT2G40170.1 (Stress induced protein ) HSP 1 Score: 121.7 bits (304), Expect = 5.1e-28 Identity = 70/110 (63.64%), Postives = 80/110 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|