Lcy03g005690.1 (mRNA) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGATTAGAATAAGATTGGACATAACAAGACCGTTAAGAAGAGGCTTTATGTTGAAAGCAAATGGTATAGAGGAGAATTGTTGGGTGACAATAAGATATGAAAGACTTCCCGACTTTTGCTTTTTCTATGGTTATGTGGGTCACGTGGCCAAAGAATGCAATGGCAAGAACAGTAAGGAGGAAGGTGATCTTAATACCCTGGAATTTGGAGCATAGTTAAAATTCCAAGGCTTTGTCAGATTTGGGAAAAGATCAGATACACCTTCAAAAGAGGAGGAAGCTAAAGAAAGGAATTGAAAAGGGGATGGAGGTTCTGGAAAAGGGGATGGAGGTTCTGGAAAAGGGGATGAAAAAGGAAAGGAGATTGCAGTGGAGGATGGGAATGTAGGGAATGGACAGGAAGATTCTGTTAGATCGAATACTTTGGCCCTTGACGCGAGATTGCAGACTTAG ATGAGGATTAGAATAAGATTGGACATAACAAGACCGTTAAGAAGAGGCTTTATGTTGAAAGCAAATGGTATAGAGGAGAATTGTTGGGTGACAATAAGATATGAAAGACTTCCCGACTTTTGCTTTTTCTATGGTTATGTGGGTCACGTGGCCAAAGAATGCAATGGCAAGAACAGTAAGGAGGAAGGGGATGGAGGTTCTGGAAAAGGGGATGAAAAAGGAAAGGAGATTGCAGTGGAGGATGGGAATGTAGGGAATGGACAGGAAGATTCTGTTAGATCGAATACTTTGGCCCTTGACGCGAGATTGCAGACTTAG ATGAGGATTAGAATAAGATTGGACATAACAAGACCGTTAAGAAGAGGCTTTATGTTGAAAGCAAATGGTATAGAGGAGAATTGTTGGGTGACAATAAGATATGAAAGACTTCCCGACTTTTGCTTTTTCTATGGTTATGTGGGTCACGTGGCCAAAGAATGCAATGGCAAGAACAGTAAGGAGGAAGGGGATGGAGGTTCTGGAAAAGGGGATGAAAAAGGAAAGGAGATTGCAGTGGAGGATGGGAATGTAGGGAATGGACAGGAAGATTCTGTTAGATCGAATACTTTGGCCCTTGACGCGAGATTGCAGACTTAG MRIRIRLDITRPLRRGFMLKANGIEENCWVTIRYERLPDFCFFYGYVGHVAKECNGKNSKEEGDGGSGKGDEKGKEIAVEDGNVGNGQEDSVRSNTLALDARLQT Homology
BLAST of Lcy03g005690.1 vs. ExPASy TrEMBL
Match: A0A6G1E7A7 (Uncharacterized protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_035741 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Lcy03g005690.1 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 4.8e-09 Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of Lcy03g005690.1 vs. ExPASy TrEMBL
Match: A0A1R3G7Z9 (Endonuclease/exonuclease/phosphatase OS=Corchorus olitorius OX=93759 GN=COLO4_36557 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 6.3e-09 Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Lcy03g005690.1 vs. ExPASy TrEMBL
Match: A0A2N9IQ83 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54171 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 6.3e-09 Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of Lcy03g005690.1 vs. ExPASy TrEMBL
Match: A0A2N9EP20 (zf-CCHC_4 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8469 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 6.3e-09 Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of Lcy03g005690.1 vs. NCBI nr
Match: KAF0920597.1 (hypothetical protein E2562_035741 [Oryza meyeriana var. granulata]) HSP 1 Score: 72.4 bits (176), Expect = 2.6e-09 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Lcy03g005690.1 vs. NCBI nr
Match: KAF7151487.1 (hypothetical protein RHSIM_Rhsim02G0110700 [Rhododendron simsii]) HSP 1 Score: 70.9 bits (172), Expect = 7.6e-09 Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Lcy03g005690.1 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 70.5 bits (171), Expect = 9.9e-09 Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of Lcy03g005690.1 vs. NCBI nr
Match: OMO54212.1 (Endonuclease/exonuclease/phosphatase [Corchorus olitorius]) HSP 1 Score: 70.1 bits (170), Expect = 1.3e-08 Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Lcy03g005690.1 vs. NCBI nr
Match: KAG5544352.1 (hypothetical protein RHGRI_016938 [Rhododendron griersonianum]) HSP 1 Score: 70.1 bits (170), Expect = 1.3e-08 Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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