Lcy01g006150.1 (mRNA) Sponge gourd (P93075) v1

Overview


Name	Lcy01g006150.1
Type	mRNA
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	COP9 signalosome complex subunit 1-like
Location	Chr01: 8780387 .. 8783190 (-)
Sequence length	1417
RNA-Seq Expression	Lcy01g006150.1
Synteny	Lcy01g006150.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTCAGGAGAAGCGAATTCGTTGACGACGCCGGAGAATCGGAAGATAATTATCGTAGTACCTCCGGCAGCGACGAAGAAGAAAAACTTAACTCTCCGACGCCGTTCTTGAAGGACAAGCTTATCGACATCCATGCCTACGCGAGCAACTACCGCCGTCGAATGAAAATCCTCCGCCTCGTATTCATCGCCGACCGCTTCGGCGACAGTAATGAACGGCGGCGGATGACTCAACTAGGAGCACTCCAAATCGCCTACGACGAGGCCAAGAAGGGCAAGGACGTCGCTCTCTTCACCAAAATCGCCGAGAAAATTAGGGGAAGATTGGGCCCTAATTACGCCATGGATGAAAATTGGCGCAATTCGGTGAATCAAGAGAAGCAAGTAATCAGCCAAATGCTACAGAGATGCACGAAGAATTCCGAGGTATGAATTTAATCAATCGATCGATCGATCGATCGATCATTGAATCAAATTCTCTGTTCTTGAGCAATCTTGATATACGTTCGTGGTTTCGATCGCGATAGATTTGTTACGCGAACAGAATCATTTCTGCGGACGACGCAAGGATTTTATTCAATGCGGTTGCGGATTTCCACCACATCCATGGCGCACCTGCAACAGCTTTTGAATTTTACAAGAAGAGCGTACGTTTCTGCAGGACCGATGAGGATCTCTCTGAATTTTTATCGCGAGTGCTTTTGACGGTGATCGATCTTGGCCAGTTCGAACACGTTGCGAAGATGGCAGAAAAAGGAATTCAAAATCCGAAGCTTAATCCGATGACTACTGACAGTCTGCGCTGCGCTCTTGGATTGGCTCGCTTCAAGGCACAACGCTACAAAGATGCTGCTCATCAGGTTTGAATTAATTAATCCATTCATTCCATAAAATTCAATATTAATTATGTTTACATTGGCAATGTGTGCAGTTCTTGGGAATCAGTAAAGAATTGGGAAACCGATTTTCGGATGTGATGGCTGCTCATGATATTGCAGCCTTTGGTGCGCTATGTGCACTTGCAACTTTTGAACCACTGGAGTTGAAGGCAACAATTTCTTTTGTTCTTGTTTTAATCTTTTTCTTTTTCTTTTTCTCCAATTACTTTTGCATAAATTTTTTGATCTGTTTACTGGTTTTTGACATTGGCAGACTTTAGTTATGGATAATGAGAATTTTCAGTTCTATTTGGATTCGGCTGTTGAAGTCAAGGAGCTCATCAAGGATTTTTGTACCAGGTATTGTAGTGAACATTAATTATCGTTTTTTAAACATCTACACCCTTTTTGTGTCTAATAATTAGTCTCTTGTTTATGAAAAGTTATGGGAAAAATTGTAGTTTTATTTCCCAAATTTCCTCGAGTGTCTATTTGATCATTAAAGTTTTTAGAAGTTTAGATTTAGCCTTTAAAGTGTTCGACATTGCTATGTTGAGCTATAAGGATCTGTTTGGAATAATACATTTTAATTTAAATGTTTTTCAAGAATACATTTTTTACAAAACATTTTGCATAAAAATTGTTTAGAATTTAAACACTCATATGTTTGGTTGCATTTTCTCATAAGTGTTTTTATACACAAGCTTAAAAGTCTTTCTTAAAATGGTTTATTTATCAATCTCATTTTCTAATGAGTCATTTTTAGTAGTTGTCAAACACTAGAAATTTTTTCAAAATGATTTATTTTCAAAATTAAACACTTGAAAAGTTAAACCAAACACACCCTAATGGTAGTTGATTGGGGAGGGAAAAAGAAAATTGTTTTTTTTTTCTGATATTTAAATGACAAGTCAACCATTATAATAATTTAATATATAAGTTTTGACACATCAGCTTTATAAATTATAAATTAATTAAAAAAAACTATAGCATTTAGTTGCTGTTACTGCAGTTAATAATATAAATTATGGAAAAGTTCTTTCCAAACAATTTTTTCAAAATTGGACCGCTAAATTGTAACTTTTAAAACTTTATAGACCAAATAGACACATGGTAAAAACTCAATTTTCCTAAAGTTTTAATTATGTTTTTTTTTTTTTTTTTTTTTTGAAAAAAAGTTTTAGTTATGTTTTTTAATTTTGGATTATATTTCTATTTAATTATTGTCACGCATTAACAGTGCTAAAGGTAGAGATGGAATTTTTTTAAAAAAAAGGTATAATTCAAAGTTTAAAATTAAATCATTTGAAAGGATATAGAAGTAATTGAAACTTTTTTGAAGTTGATGAGGCTAATTGAATTTAACTTACTTTTGCTAGGCGTTATTCTTCATTCCTCAAACACTTTGATAACATCAAAGGATGGCTGTTGCTTGACATACATTTTTACAATCACTTTGATACATTGTATGATCAAATCAGATGCAAAGCTCTTGTACAGTACACTGAGCCCTTTGTGTCAATTGGTTTGCAAAGAGTGGCAGTTGTTTTTGGCTCAAGCATTGAAGCTATTGAGAAAGACCTTGTAACTTTAATAAACACTAACCAAATTCAGGTCTTCTTACCTTTTGAAACTCTTTACCTCAACCCTTCAAATTTACTGTGTCATTCTTTTACTAATAATCTTAAACAATCCTTTTTGTGTAGGCCGATATTGACCCAGTCGACAAAGTTCTACGTGTACGTAAAGTTTAAAGAAACAACTTTTTGTCGAGTTTTACAAAGTTAGAGTGTGTAATTGAACATGATCAGGTTCGTGTTGTTGTTGAAGGCACACTTTATTCGTCATTATGCTTGCATTGATACTAGTATGATCATGTTGATATTTTTGTGATGTTCAAATAGCGTGGCTAACACTTTTATA

mRNA sequence

ATGAATTTCAGGAGAAGCGAATTCGTTGACGACGCCGGAGAATCGGAAGATAATTATCGTAGTACCTCCGGCAGCGACGAAGAAGAAAAACTTAACTCTCCGACGCCGTTCTTGAAGGACAAGCTTATCGACATCCATGCCTACGCGAGCAACTACCGCCGTCGAATGAAAATCCTCCGCCTCGTATTCATCGCCGACCGCTTCGGCGACAGTAATGAACGGCGGCGGATGACTCAACTAGGAGCACTCCAAATCGCCTACGACGAGGCCAAGAAGGGCAAGGACGTCGCTCTCTTCACCAAAATCGCCGAGAAAATTAGGGGAAGATTGGGCCCTAATTACGCCATGGATGAAAATTGGCGCAATTCGGTGAATCAAGAGAAGCAAGTAATCAGCCAAATGCTACAGAGATGCACGAAGAATTCCGAGATTTGTTACGCGAACAGAATCATTTCTGCGGACGACGCAAGGATTTTATTCAATGCGGTTGCGGATTTCCACCACATCCATGGCGCACCTGCAACAGCTTTTGAATTTTACAAGAAGAGCGTACGTTTCTGCAGGACCGATGAGGATCTCTCTGAATTTTTATCGCGAGTGCTTTTGACGGTGATCGATCTTGGCCAGTTCGAACACGTTGCGAAGATGGCAGAAAAAGGAATTCAAAATCCGAAGCTTAATCCGATGACTACTGACAGTCTGCGCTGCGCTCTTGGATTGGCTCGCTTCAAGGCACAACGCTACAAAGATGCTGCTCATCAGTTCTTGGGAATCAGTAAAGAATTGGGAAACCGATTTTCGGATGTGATGGCTGCTCATGATATTGCAGCCTTTGGTGCGCTATGTGCACTTGCAACTTTTGAACCACTGGAGTTGAAGACTTTAGTTATGGATAATGAGAATTTTCAGTTCTATTTGGATTCGGCTGTTGAAGTCAAGGAGCTCATCAAGGATTTTTGTACCAGGCGTTATTCTTCATTCCTCAAACACTTTGATAACATCAAAGGATGGCTGTTGCTTGACATACATTTTTACAATCACTTTGATACATTGTATGATCAAATCAGATGCAAAGCTCTTGTACAGTACACTGAGCCCTTTGTGTCAATTGGTTTGCAAAGAGTGGCAGTTGTTTTTGGCTCAAGCATTGAAGCTATTGAGAAAGACCTTGTAACTTTAATAAACACTAACCAAATTCAGGCCGATATTGACCCAGTCGACAAAGTTCTACGTGTACGTAAAGTTTAAAGAAACAACTTTTTGTCGAGTTTTACAAAGTTAGAGTGTGTAATTGAACATGATCAGGTTCGTGTTGTTGTTGAAGGCACACTTTATTCGTCATTATGCTTGCATTGATACTAGTATGATCATGTTGATATTTTTGTGATGTTCAAATAGCGTGGCTAACACTTTTATA

Coding sequence (CDS)

ATGAATTTCAGGAGAAGCGAATTCGTTGACGACGCCGGAGAATCGGAAGATAATTATCGTAGTACCTCCGGCAGCGACGAAGAAGAAAAACTTAACTCTCCGACGCCGTTCTTGAAGGACAAGCTTATCGACATCCATGCCTACGCGAGCAACTACCGCCGTCGAATGAAAATCCTCCGCCTCGTATTCATCGCCGACCGCTTCGGCGACAGTAATGAACGGCGGCGGATGACTCAACTAGGAGCACTCCAAATCGCCTACGACGAGGCCAAGAAGGGCAAGGACGTCGCTCTCTTCACCAAAATCGCCGAGAAAATTAGGGGAAGATTGGGCCCTAATTACGCCATGGATGAAAATTGGCGCAATTCGGTGAATCAAGAGAAGCAAGTAATCAGCCAAATGCTACAGAGATGCACGAAGAATTCCGAGATTTGTTACGCGAACAGAATCATTTCTGCGGACGACGCAAGGATTTTATTCAATGCGGTTGCGGATTTCCACCACATCCATGGCGCACCTGCAACAGCTTTTGAATTTTACAAGAAGAGCGTACGTTTCTGCAGGACCGATGAGGATCTCTCTGAATTTTTATCGCGAGTGCTTTTGACGGTGATCGATCTTGGCCAGTTCGAACACGTTGCGAAGATGGCAGAAAAAGGAATTCAAAATCCGAAGCTTAATCCGATGACTACTGACAGTCTGCGCTGCGCTCTTGGATTGGCTCGCTTCAAGGCACAACGCTACAAAGATGCTGCTCATCAGTTCTTGGGAATCAGTAAAGAATTGGGAAACCGATTTTCGGATGTGATGGCTGCTCATGATATTGCAGCCTTTGGTGCGCTATGTGCACTTGCAACTTTTGAACCACTGGAGTTGAAGACTTTAGTTATGGATAATGAGAATTTTCAGTTCTATTTGGATTCGGCTGTTGAAGTCAAGGAGCTCATCAAGGATTTTTGTACCAGGCGTTATTCTTCATTCCTCAAACACTTTGATAACATCAAAGGATGGCTGTTGCTTGACATACATTTTTACAATCACTTTGATACATTGTATGATCAAATCAGATGCAAAGCTCTTGTACAGTACACTGAGCCCTTTGTGTCAATTGGTTTGCAAAGAGTGGCAGTTGTTTTTGGCTCAAGCATTGAAGCTATTGAGAAAGACCTTGTAACTTTAATAAACACTAACCAAATTCAGGCCGATATTGACCCAGTCGACAAAGTTCTACGTGTACGTAAAGTTTAA

Protein sequence

MNFRRSEFVDDAGESEDNYRSTSGSDEEEKLNSPTPFLKDKLIDIHAYASNYRRRMKILRLVFIADRFGDSNERRRMTQLGALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDENWRNSVNQEKQVISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEFYKKSVRFCRTDEDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTDSLRCALGLARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDNENFQFYLDSAVEVKELIKDFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKALVQYTEPFVSIGLQRVAVVFGSSIEAIEKDLVTLINTNQIQADIDPVDKVLRVRKV

Homology

[Close]

BLAST of Lcy01g006150.1 vs. ExPASy Swiss-Prot
Match: P45432 (COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CSN1 PE=1 SV=2)

HSP 1 Score: 290.8 bits (743), Expect = 2.4e-77
Identity = 161/386 (41.71%), Postives = 237/386 (61.40%), Query Frame = 0


Query: 29  EKLNSPTPFLKDKLIDIHAYASNYRRRMKILRLVFIADRFGDSNERRRMTQLGALQIAYD 88
           E+ ++  P +  + +DI AYA+ Y+ R KI+RL+FIA+  G ++      Q  AL++AYD
Sbjct: 20  EETSNRRPIISGEPLDIEAYAALYKGRTKIMRLLFIANHCGGNH----ALQFDALRMAYD 79

Query: 89  EAKKGKDVALFTKIAEKIRGRLGPNYAMDENWRNSVNQEKQVISQMLQRCTKNSEICYAN 148
           E KKG++  LF ++  KI  RLG  Y MD  W  +V++  +     L+    N    Y  
Sbjct: 80  EIKKGENTQLFREVVNKIGNRLGEKYGMDLAWCEAVDRRAEQKKVKLE----NELSSYRT 139

Query: 149 RIISADDARILFNAVADFHHIHGAPATAFEFYKKSVRFCRTDEDLSEFLSRVLLTVIDLG 208
            +I  +  R+ +N   DF++  G    AF+ Y ++  +C T + +       +L  I++G
Sbjct: 140 NLIK-ESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMG 199

Query: 209 QFEHVAKMAEKGIQNPK-LNPMTTDSLRCALGLARFKAQRYKDAAHQFLGISKELGNRFS 268
           QF HV     K  QNP+ L PM    LRCA GLA  + ++YK AA +FL ++ ELGN ++
Sbjct: 200 QFTHVTSYVNKAEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYN 259

Query: 269 DVMAAHDIAAFGALCALATFEPLELKTLVMDNENFQFYLDSAVEVKELIKDFCTRRYSSF 328
           +V+A  DIA +G LCALA+F+  ELK  V+DN NF+ +L+   +V+ELI DF + RY+S 
Sbjct: 260 EVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASC 319

Query: 329 LKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKALVQYTEPFVSIGLQRVAVVFGSSIEAIE 388
           L++  ++K  LLLDIH ++H DTLYDQIR KAL+QYT PFVS+ L R+A  F +S+  +E
Sbjct: 320 LEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLE 379

Query: 389 KDLVTLINTNQIQADIDPVDKVLRVR 414
           K+L  LI  NQIQA ID  +K+L  R
Sbjct: 380 KELEALITDNQIQARIDSHNKILYAR 396

[Close]

BLAST of Lcy01g006150.1 vs. ExPASy Swiss-Prot
Match: Q54QX3 (COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=csn1 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-49
Identity = 129/397 (32.49%), Postives = 202/397 (50.88%), Query Frame = 0


Query: 20  RSTSGSDEEEKLNSPTPFLKDKLIDIHAYASNYRRRMKILRLVFIADRFGDSNERRRMTQ 79
           ++T GS      N+    + ++  D+  Y +NY    KI RL+FIAD         +  +
Sbjct: 8   KNTEGSSSSSSNNNNNNSISNE-FDLETYINNYSGFTKIHRLIFIADNC-------KQLE 67

Query: 80  LGALQIAYDEAKKGKDVALFTKIAEKIRG--RLGPNYAMDENWRNSVNQEKQVISQMLQR 139
           + A  +A  E +K  ++ L+  I  K  G   L P Y  + + +NS+  +K  + Q L  
Sbjct: 68  VEAYNMALKEVQKTPNLELYNTIINKSHGILELDPVYIENLSKKNSLQLDK--LEQDLNT 127

Query: 140 CTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEFYKKSVRFCRTDEDLSEFL 199
              N         +  D  R   N + +F++  G    A + + ++  +C T + +    
Sbjct: 128 AKSN---------MVKDSIRFAQNDLGEFYYKIGDHQNALKCFIRTRDYCTTSKHVLAMC 187

Query: 200 SRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTDSLRCALGLARFKAQRYKDAAHQFLG 259
             ++   +D   + H      K  Q+P L+ ++   LR   GL      RYK AA +F+ 
Sbjct: 188 FNIIKLGVDTQNYTHAPSYIAKAEQSPDLDNVSNAKLRSVNGLYNLDGSRYKLAARKFIE 247

Query: 260 ISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDNENFQFYLDSAVEVKELIK 319
              E  N FSD+++  DIA +G LCALATF+  ELK  V+D+  F+ YL+   E++ELI 
Sbjct: 248 TPFEQSNVFSDIISPQDIAYYGGLCALATFDRNELKKKVIDDPMFKNYLELVPELRELIN 307

Query: 320 DFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKALVQYTEPFVSIGLQRVAV 379
           DF   +Y S LK+ D +K  LLLDIH Y H + LY +IR KALVQY  P+ S+ +  +A 
Sbjct: 308 DFYNTKYGSCLKYLDKMKPILLLDIHLYKHVEILYQRIRSKALVQYFSPYQSVDMNIMAS 367

Query: 380 VFGSSIEAIEKDLVTLINTNQIQADIDPVDKVLRVRK 415
            F +++  +EK++  LI  N+IQA ID  +K L  RK
Sbjct: 368 AFNTTVTLLEKEISKLIMENEIQARIDSHNKRLYARK 385

[Close]

BLAST of Lcy01g006150.1 vs. ExPASy Swiss-Prot
Match: Q6NRT5 (COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.9e-36
Identity = 115/415 (27.71%), Postives = 201/415 (48.43%), Query Frame = 0


Query: 26  DEEEKLNSPTPFLKDKLIDIHAYASNYRRRMKILRLVFIADRFGDSNERRRMTQLGALQI 85
           D+++ +      +++  +D+  YAS+Y   M+I RL FIADR           ++ AL++
Sbjct: 25  DDQQNMPDVNYVVENPTLDLEQYASSYSGLMRIERLQFIADRC-------PQLRVEALKM 84

Query: 86  AYDEAKKGKDVALFTKIAEKI---------------RGRLGPNYAMDENWRNSVNQEKQV 145
           A    ++  +V ++  I  K+                G + P  A+D +W  +  ++  +
Sbjct: 85  ALSFVQRTFNVDVYEDIHRKLAEASREVQNAPDAVPEGSMEPP-ALDTSWVEATRKKALL 144

Query: 146 ISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEFYKKSVRFCRTD 205
             + L    KN    Y    I  +  R   + + D +   G  + A + Y ++  +C + 
Sbjct: 145 KLEKLDTDLKN----YKGNSIK-ESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSA 204

Query: 206 EDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKL----------NPMTTDSLRCALGL 265
           + +      V+   + L  + HV     K    P++                 L+CA GL
Sbjct: 205 KHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAVLTKLKCAAGL 264

Query: 266 ARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDNE 325
           A   A++YK AA  FL  S +  + F ++++  ++A +G LCALATF+  EL+  V+ + 
Sbjct: 265 AELAARKYKQAAKCFLLASFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSS 324

Query: 326 NFQFYLDSAVEVKELIKDFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKAL 385
           +F+ +L+   +V+++I  F   +Y+S LK  D IK  LLLD++   H  TLY QIR +AL
Sbjct: 325 SFKLFLELEPQVRDIIFKFYESKYASCLKMLDEIKDNLLLDMYLAPHVRTLYTQIRNRAL 384

Query: 386 VQYTEPFVSIGLQRVAVVFGSSIEAIEKDLVTLINTNQIQADIDPVDKVLRVRKV 416
           +QY  P+VS  + ++A  F +++ A+E +L  LI    I A ID   K+L  R V
Sbjct: 385 IQYFSPYVSADMYKMATAFNTTVSALEDELTQLILEGLINARIDSHSKILYARDV 425

[Close]

BLAST of Lcy01g006150.1 vs. ExPASy Swiss-Prot
Match: Q99LD4 (COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-33
Identity = 113/415 (27.23%), Postives = 202/415 (48.67%), Query Frame = 0


Query: 27  EEEKLNSP--TPFLKDKLIDIHAYASNYRRRMKILRLVFIADRFGDSNERRRMTQLGALQ 86
           +E+  N+P     +++  +D+  YA++Y   M+I RL FIADR           ++ AL+
Sbjct: 8   QEDPQNAPDVNYVVENPTLDLEQYAASYSGLMRIERLQFIADRCPP-------LRVEALK 67

Query: 87  IAYDEAKKGKDVALFTKIAEKIRG-----RLGPNY---------AMDENWRNSVNQEKQV 146
           +A    ++  +V ++ +I  K+       +  P+           +D  W  +  ++  +
Sbjct: 68  MALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPPLDTAWVEATRKKALL 127

Query: 147 ISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEFYKKSVRFCRTD 206
             + L    KN    Y    I  +  R   + + D +   G  + A + Y ++  +C + 
Sbjct: 128 KLEKLDTDLKN----YKGNSIK-ESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSA 187

Query: 207 EDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTD----------SLRCALGL 266
           + +      V+   + L  + HV     K    P++     +           L+CA GL
Sbjct: 188 KHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGL 247

Query: 267 ARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDNE 326
           A   A++YK AA  FL  S +  + F ++++  ++A +G LCALATF+  EL+  V+ + 
Sbjct: 248 AELAARKYKQAAKCFLLASFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSS 307

Query: 327 NFQFYLDSAVEVKELIKDFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKAL 386
           +F+ +L+   +V+++I  F   +Y+S LK  D +K  LLLD++   H  TLY QIR +AL
Sbjct: 308 SFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRAL 367

Query: 387 VQYTEPFVSIGLQRVAVVFGSSIEAIEKDLVTLINTNQIQADIDPVDKVLRVRKV 416
           +QY  P+VS  + ++A  F +++ A+E +L  LI    I A ID   K+L  R V
Sbjct: 368 IQYFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLINARIDSHSKILYARDV 409

[Close]

BLAST of Lcy01g006150.1 vs. ExPASy Swiss-Prot
Match: P97834 (COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.7e-33
Identity = 112/415 (26.99%), Postives = 202/415 (48.67%), Query Frame = 0


Query: 27  EEEKLNSP--TPFLKDKLIDIHAYASNYRRRMKILRLVFIADRFGDSNERRRMTQLGALQ 86
           +E+  N+P     +++  +D+  YA++Y   M+I RL FIADR           ++ AL+
Sbjct: 8   QEDPQNAPDVNYVVENPTLDLEQYAASYSGLMRIERLQFIADRCPP-------LRVEALK 67

Query: 87  IAYDEAKKGKDVALFTKIAEKIRG-----RLGPNY---------AMDENWRNSVNQEKQV 146
           +A    ++  +V ++ +I  K+       +  P+           +D  W  +  ++  +
Sbjct: 68  MALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPPLDTAWVEATRKKALL 127

Query: 147 ISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEFYKKSVRFCRTD 206
             + L    KN    Y    I  +  R   + + D +   G  + A + Y ++  +C + 
Sbjct: 128 KLEKLDTDLKN----YKGNSIK-ESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSA 187

Query: 207 EDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTD----------SLRCALGL 266
           + +      V+   + L  + HV     K    P++     +           L+CA GL
Sbjct: 188 KHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGL 247

Query: 267 ARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDNE 326
           A   A++YK AA  FL  S +  + F ++++  ++A +G LCALATF+  EL+  V+ + 
Sbjct: 248 AELAARKYKQAAKCFLLASFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSS 307

Query: 327 NFQFYLDSAVEVKELIKDFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKAL 386
           +F+ +L+   +V+++I  F   +Y+S LK  D +K  LLLD++   H  TLY QIR +AL
Sbjct: 308 SFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRAL 367

Query: 387 VQYTEPFVSIGLQRVAVVFGSSIEAIEKDLVTLINTNQIQADIDPVDKVLRVRKV 416
           +QY  P+VS  + ++A  F +++ A+E +L  +I    I A ID   K+L  R V
Sbjct: 368 IQYFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHSKILYARDV 409

[Close]

BLAST of Lcy01g006150.1 vs. ExPASy TrEMBL
Match: A0A6J1H3C9 (COP9 signalosome complex subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460031 PE=3 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 5.3e-144
Identity = 264/411 (64.23%), Postives = 327/411 (79.56%), Query Frame = 0


Query: 1   MNFRRSEFVDDAGESEDNYRSTSGSDEEEKLNSPTPFLK-DKLIDIHAYASNYRRRMKIL 60
           M+F RS+    + + +DNY     SDEE K +SPTPFLK  K  DI AYASNY R  KIL
Sbjct: 1   MHFWRSKSDGHSNKPKDNY-GNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKIL 60

Query: 61  RLVFIADRFGDSNERRRMTQLGALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDEN 120
           RL+FIADRFG++NERRR  QL AL+IAYD AKKG DV +F KI  KI GRLGPNY MDEN
Sbjct: 61  RLIFIADRFGNANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDEN 120

Query: 121 WRNSVNQEKQVISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEF 180
           W NSV + ++V+S+MLQRC KN E  Y  R I A+DAR +FN++A F+  HGA   A+ F
Sbjct: 121 WCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAF 180

Query: 181 YKKSVRFCRTDEDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTDSLRCALG 240
           YKKSV FCR+D++ SE L R+++ VI+LGQFE   ++AEKG+Q P LNP+T ++LRCALG
Sbjct: 181 YKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALG 240

Query: 241 LARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDN 300
           LARFKA  YKDAAHQ LG+SKELGNRFS VMAAHDIA FGALCALATF+P+E KT V+DN
Sbjct: 241 LARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDN 300

Query: 301 ENFQFYLDSAVEVKELIKDFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKA 360
           +NF FYLDSA+EVKEL++DF  RRY S  +H DN++ WLL DI+F+NH++TLY++IR +A
Sbjct: 301 QNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRA 360

Query: 361 LVQYTEPFVSIGLQRVAVVFGSSIEAIEKDLVTLINTNQIQADIDPVDKVL 411
           L+ YTEPFV++GLQRVAVVFG++IEAIEK L+ LINTNQIQAD+D ++KV+
Sbjct: 361 LIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVV 410

[Close]

BLAST of Lcy01g006150.1 vs. ExPASy TrEMBL
Match: A0A6J1KWI7 (COP9 signalosome complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498865 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-96
Identity = 190/297 (63.97%), Postives = 228/297 (76.77%), Query Frame = 0


Query: 1   MNFRRSEFVDDAGESEDNYRSTSGSDEEEKLNSPTPFLK-DKLIDIHAYASNYRRRMKIL 60
           M+F RS+    + + EDNY     SDEEEK  SPTPFLK  K  DI AYASNY R  KIL
Sbjct: 1   MHFCRSKSDGHSDKPEDNY-GNFDSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKIL 60

Query: 61  RLVFIADRFGDSNERRRMTQLGALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDEN 120
           RL+FIADRFG++NERRR  QL AL+IAYD AKKGKDV +F KI  KI GRLGPNY MDEN
Sbjct: 61  RLIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDEN 120

Query: 121 WRNSVNQEKQVISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEF 180
           W NSV + ++V+S+MLQRC KN E  Y  R I A+DAR +FN++A F+  HGA   A+ F
Sbjct: 121 WCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAF 180

Query: 181 YKKSVRFCRTDEDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTDSLRCALG 240
           YKKSV FCR+D++ SE L R+++ VI+LGQFE  A++AEKG+Q P LNP+T ++LRCALG
Sbjct: 181 YKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPNLNPITMETLRCALG 240

Query: 241 LARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLV 297
           LARFK+  YKDAAHQ LG+SKELGNRFS VMAAHDIA FGALCALATF+P+E K  +
Sbjct: 241 LARFKSHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKNFI 296

[Close]

BLAST of Lcy01g006150.1 vs. ExPASy TrEMBL
Match: A0A067HDM6 (PCI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g013559mg PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 3.8e-81
Identity = 171/393 (43.51%), Postives = 248/393 (63.10%), Query Frame = 0


Query: 22  TSGSDEEEKLNSPTPFLKDKLIDIHAYASNYRRRMKILRLVFIADRFGDSNERRRMTQLG 81
           ++G +E  +     P +  + +D+ AYAS Y+ R KI RL+FIAD    ++      QL 
Sbjct: 17  SNGGEESARTR---PIISGEQLDVEAYASLYQGRTKITRLMFIADHCDIAS-----MQLE 76

Query: 82  ALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDENWRNSVNQEKQVISQMLQRCTKN 141
           AL++AYDE KKG++  LF ++ +KI GRLGPNYAMDE W +SV++  +   + L+    N
Sbjct: 77  ALRMAYDEIKKGENTQLFREVVKKIDGRLGPNYAMDEAWCDSVDRRAEQRKEKLE----N 136

Query: 142 SEICYANRIISADDARILFNAVADFHHIHGAPATAFEFYKKSVRFCRTDEDLSEFLSRVL 201
               Y   +I  +  R+ +N   DF++ HGA   AF+ Y ++  +C T + +       +
Sbjct: 137 ELNAYRTNLIK-ESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAI 196

Query: 202 LTVIDLGQFEHVAKMAEKGIQNPK-LNPMTTDSLRCALGLARFKAQRYKDAAHQFLGISK 261
           L  I++GQF HV     K  Q P+ L P+T   LRCA GLA  +A++YK AA +FL +  
Sbjct: 197 LVSIEMGQFTHVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGP 256

Query: 262 ELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDNENFQFYLDSAVEVKELIKDFC 321
           +LGN +++V+AA D+A +G LCALA+F+  ELK+ V+DN NF+ +L+   EV+ELI DF 
Sbjct: 257 DLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFY 316

Query: 322 TRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKALVQYTEPFVSIGLQRVAVVFG 381
           + RY+S L +  N+K  LLLDIH ++H +TLYDQIR KAL+QYT PFVS+ L  +A  F 
Sbjct: 317 SSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFK 376

Query: 382 SSIEAIEKDLVTLINTNQIQADIDPVDKVLRVR 414
           +S+  IEK+L  LI  NQIQA ID  +K+L  R
Sbjct: 377 TSVAGIEKELEALITDNQIQARIDSHNKILYAR 396

[Close]

BLAST of Lcy01g006150.1 vs. ExPASy TrEMBL
Match: V4U862 (PCI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10020177mg PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 3.8e-81
Identity = 171/393 (43.51%), Postives = 248/393 (63.10%), Query Frame = 0


Query: 22  TSGSDEEEKLNSPTPFLKDKLIDIHAYASNYRRRMKILRLVFIADRFGDSNERRRMTQLG 81
           ++G +E  +     P +  + +D+ AYAS Y+ R KI RL+FIAD    ++      QL 
Sbjct: 17  SNGGEESARTR---PIISGEQLDVEAYASLYQGRTKITRLMFIADHCDIAS-----MQLE 76

Query: 82  ALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDENWRNSVNQEKQVISQMLQRCTKN 141
           AL++AYDE KKG++  LF ++ +KI GRLGPNYAMDE W +SV++  +   + L+    N
Sbjct: 77  ALRMAYDEIKKGENTQLFREVVKKIDGRLGPNYAMDEAWCDSVDRRAEQRKEKLE----N 136

Query: 142 SEICYANRIISADDARILFNAVADFHHIHGAPATAFEFYKKSVRFCRTDEDLSEFLSRVL 201
               Y   +I  +  R+ +N   DF++ HGA   AF+ Y ++  +C T + +       +
Sbjct: 137 ELNAYRTNLIK-ESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAI 196

Query: 202 LTVIDLGQFEHVAKMAEKGIQNPK-LNPMTTDSLRCALGLARFKAQRYKDAAHQFLGISK 261
           L  I++GQF HV     K  Q P+ L P+T   LRCA GLA  +A++YK AA +FL +  
Sbjct: 197 LVSIEMGQFTHVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGP 256

Query: 262 ELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDNENFQFYLDSAVEVKELIKDFC 321
           +LGN +++V+AA D+A +G LCALA+F+  ELK+ V+DN NF+ +L+   EV+ELI DF 
Sbjct: 257 DLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFY 316

Query: 322 TRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKALVQYTEPFVSIGLQRVAVVFG 381
           + RY+S L +  N+K  LLLDIH ++H +TLYDQIR KAL+QYT PFVS+ L  +A  F 
Sbjct: 317 SSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHMMANAFK 376

Query: 382 SSIEAIEKDLVTLINTNQIQADIDPVDKVLRVR 414
           +S+  IEK+L  LI  NQIQA ID  +K+L  R
Sbjct: 377 TSVAGIEKELEALITDNQIQARIDSHNKILYAR 396

[Close]

BLAST of Lcy01g006150.1 vs. ExPASy TrEMBL
Match: A0A2P5CNT9 (26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit OS=Trema orientale OX=63057 GN=TorRG33x02_278450 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 2.7e-79
Identity = 171/399 (42.86%), Postives = 246/399 (61.65%), Query Frame = 0


Query: 16  EDNYRSTSGSDEEEKLNSPTPFLKDKLIDIHAYASNYRRRMKILRLVFIADRFGDSNERR 75
           ++ Y +     +EEK N   P +  + +DI AYAS Y  R KI RL+FIAD      E  
Sbjct: 14  DEIYANGGVGGDEEKRN--RPIISGEQLDIEAYASLYAGRTKITRLLFIADHC----ENN 73

Query: 76  RMTQLGALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDENWRNSVNQEKQVISQML 135
           +  QL AL++AYDE KKG++  LF ++ +KI GRLG NY MD  WR+SV++  +   + L
Sbjct: 74  QSMQLEALRMAYDEIKKGENTQLFREVVQKINGRLGHNYVMDSAWRDSVDRRAEQKKEKL 133

Query: 136 QRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEFYKKSVRFCRTDEDLSE 195
           +    N    Y   +I  +  R+ +N   DF++ HGA   AF+ Y ++  +C T + +  
Sbjct: 134 E----NELNAYRTNLIK-ESIRMGYNDFGDFYYAHGALGDAFKHYVRTRDYCTTSKHIIH 193

Query: 196 FLSRVLLTVIDLGQFEHVAKMAEKGIQNPK-LNPMTTDSLRCALGLARFKAQRYKDAAHQ 255
                +L  I++GQF HV     K  Q+ + L+P+ T  LRCA GLA  +A++YK AA +
Sbjct: 194 MCMNAILVSIEMGQFTHVTSYVSKAEQSSETLDPILTGKLRCAAGLAHLEAKKYKLAARK 253

Query: 256 FLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDNENFQFYLDSAVEVKE 315
           FL  S ELG+ +++V+A  D+A +G LCALA+F+  ELK  V+DN NF+ +L+   E++E
Sbjct: 254 FLETSAELGSHYNEVIAPQDVATYGGLCALASFDRTELKNKVIDNLNFRNFLELVPEIRE 313

Query: 316 LIKDFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKALVQYTEPFVSIGLQR 375
           LI DF +  Y+S L +  N+K  LLLDIH ++H +TLYDQIR KAL+QYT PFVS+ L  
Sbjct: 314 LINDFYSSHYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNKALIQYTHPFVSVDLHM 373

Query: 376 VAVVFGSSIEAIEKDLVTLINTNQIQADIDPVDKVLRVR 414
           +A  F +SI  +EK+L  LI  NQIQA ID  +K+L  R
Sbjct: 374 MANAFKTSITGLEKELEALITENQIQARIDSHNKILYAR 401

[Close]

BLAST of Lcy01g006150.1 vs. NCBI nr
Match: XP_022958876.1 (COP9 signalosome complex subunit 1-like [Cucurbita moschata])

HSP 1 Score: 520.8 bits (1340), Expect = 1.1e-143
Identity = 264/411 (64.23%), Postives = 327/411 (79.56%), Query Frame = 0


Query: 1   MNFRRSEFVDDAGESEDNYRSTSGSDEEEKLNSPTPFLK-DKLIDIHAYASNYRRRMKIL 60
           M+F RS+    + + +DNY     SDEE K +SPTPFLK  K  DI AYASNY R  KIL
Sbjct: 1   MHFWRSKSDGHSNKPKDNY-GNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKIL 60

Query: 61  RLVFIADRFGDSNERRRMTQLGALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDEN 120
           RL+FIADRFG++NERRR  QL AL+IAYD AKKG DV +F KI  KI GRLGPNY MDEN
Sbjct: 61  RLIFIADRFGNANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDEN 120

Query: 121 WRNSVNQEKQVISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEF 180
           W NSV + ++V+S+MLQRC KN E  Y  R I A+DAR +FN++A F+  HGA   A+ F
Sbjct: 121 WCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAF 180

Query: 181 YKKSVRFCRTDEDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTDSLRCALG 240
           YKKSV FCR+D++ SE L R+++ VI+LGQFE   ++AEKG+Q P LNP+T ++LRCALG
Sbjct: 181 YKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALG 240

Query: 241 LARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDN 300
           LARFKA  YKDAAHQ LG+SKELGNRFS VMAAHDIA FGALCALATF+P+E KT V+DN
Sbjct: 241 LARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDN 300

Query: 301 ENFQFYLDSAVEVKELIKDFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKA 360
           +NF FYLDSA+EVKEL++DF  RRY S  +H DN++ WLL DI+F+NH++TLY++IR +A
Sbjct: 301 QNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRA 360

Query: 361 LVQYTEPFVSIGLQRVAVVFGSSIEAIEKDLVTLINTNQIQADIDPVDKVL 411
           L+ YTEPFV++GLQRVAVVFG++IEAIEK L+ LINTNQIQAD+D ++KV+
Sbjct: 361 LIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVV 410

[Close]

BLAST of Lcy01g006150.1 vs. NCBI nr
Match: KAG6574781.1 (COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 518.1 bits (1333), Expect = 7.1e-143
Identity = 264/411 (64.23%), Postives = 326/411 (79.32%), Query Frame = 0


Query: 1   MNFRRSEFVDDAGESEDNYRSTSGSDEEEKLNSPTPFLK-DKLIDIHAYASNYRRRMKIL 60
           M+F RS+    + + +DNY     SDEE K +SPTPFLK  K  DI AYASNY R  KIL
Sbjct: 1   MHFWRSKSDGHSIKPKDNY-GNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKIL 60

Query: 61  RLVFIADRFGDSNERRRMTQLGALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDEN 120
           RL+FIADRFG +NERRR  QL AL+IAYD AKKG DV +F KI  KI GRLGPNY MDEN
Sbjct: 61  RLIFIADRFGHANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDEN 120

Query: 121 WRNSVNQEKQVISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEF 180
           W NSV + ++V+S+MLQRC KN E  Y  R I A+DAR +FN++A F+  HGA   A+ F
Sbjct: 121 WCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAF 180

Query: 181 YKKSVRFCRTDEDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTDSLRCALG 240
           YKKSV FCR+D++ SE L R+++ VI+LGQFE   ++AEKG+Q P LNP+T ++LRCALG
Sbjct: 181 YKKSVHFCRSDKNYSEVLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALG 240

Query: 241 LARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMDN 300
           LARFKA  YKDAAHQ LG+SKELGNRFS VMAAHDIA FGALCALATF+P+E KT V+DN
Sbjct: 241 LARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKTSVIDN 300

Query: 301 ENFQFYLDSAVEVKELIKDFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKA 360
           +NF FYLDSA+EVKEL++DF  RRY S  +H DN++ WLL DI+F+NH++TLY++IR +A
Sbjct: 301 QNFHFYLDSALEVKELVRDFYLRRYCSCFRHLDNLREWLLADIYFFNHYETLYNKIRNRA 360

Query: 361 LVQYTEPFVSIGLQRVAVVFGSSIEAIEKDLVTLINTNQIQADIDPVDKVL 411
           L+ YTEPFV++GLQRVAVVFG++IEAIEK L+ LINTNQIQAD+D ++KV+
Sbjct: 361 LIVYTEPFVAVGLQRVAVVFGTNIEAIEKQLLALINTNQIQADVDSINKVV 410

[Close]

BLAST of Lcy01g006150.1 vs. NCBI nr
Match: XP_023005986.1 (COP9 signalosome complex subunit 1-like [Cucurbita maxima])

HSP 1 Score: 363.2 bits (931), Expect = 2.9e-96
Identity = 190/297 (63.97%), Postives = 228/297 (76.77%), Query Frame = 0


Query: 1   MNFRRSEFVDDAGESEDNYRSTSGSDEEEKLNSPTPFLK-DKLIDIHAYASNYRRRMKIL 60
           M+F RS+    + + EDNY     SDEEEK  SPTPFLK  K  DI AYASNY R  KIL
Sbjct: 1   MHFCRSKSDGHSDKPEDNY-GNFDSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKIL 60

Query: 61  RLVFIADRFGDSNERRRMTQLGALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDEN 120
           RL+FIADRFG++NERRR  QL AL+IAYD AKKGKDV +F KI  KI GRLGPNY MDEN
Sbjct: 61  RLIFIADRFGNANERRRSMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDEN 120

Query: 121 WRNSVNQEKQVISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEF 180
           W NSV + ++V+S+MLQRC KN E  Y  R I A+DAR +FN++A F+  HGA   A+ F
Sbjct: 121 WCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAF 180

Query: 181 YKKSVRFCRTDEDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTDSLRCALG 240
           YKKSV FCR+D++ SE L R+++ VI+LGQFE  A++AEKG+Q P LNP+T ++LRCALG
Sbjct: 181 YKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPNLNPITMETLRCALG 240

Query: 241 LARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLV 297
           LARFK+  YKDAAHQ LG+SKELGNRFS VMAAHDIA FGALCALATF+P+E K  +
Sbjct: 241 LARFKSHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKNFI 296

[Close]

BLAST of Lcy01g006150.1 vs. NCBI nr
Match: XP_023547756.1 (COP9 signalosome complex subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.5 bits (929), Expect = 5.0e-96
Identity = 190/297 (63.97%), Postives = 228/297 (76.77%), Query Frame = 0


Query: 1   MNFRRSEFVDDAGESEDNYRSTSGSDEEEKLNSPTPFLK-DKLIDIHAYASNYRRRMKIL 60
           M+F RS+    + + EDNY     SDEEEK  SPTPFLK  K  DI AYASNY R  KIL
Sbjct: 1   MHFWRSKSDGHSDKPEDNY-GNFDSDEEEKGYSPTPFLKGGKHFDIQAYASNYHRSTKIL 60

Query: 61  RLVFIADRFGDSNERRRMTQLGALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDEN 120
           RL+FIADRFG++NERRR  QL AL+IAYD AKKGKDV +F KI  KI GRLGPNY MDEN
Sbjct: 61  RLIFIADRFGNANERRRRMQLEALRIAYDIAKKGKDVNVFIKIVRKIDGRLGPNYDMDEN 120

Query: 121 WRNSVNQEKQVISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEF 180
           W NSV + ++V+S+MLQRC KN E  Y  R I A+DAR +FN++A F+  HGA   A+ F
Sbjct: 121 WCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAF 180

Query: 181 YKKSVRFCRTDEDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTDSLRCALG 240
           YKKSV FCR+D++ SE L R+++ VI+LGQFE  A++AEKG+Q P L+P+T ++LRCALG
Sbjct: 181 YKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASAEIAEKGMQYPNLHPITMETLRCALG 240

Query: 241 LARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLV 297
           LARFKA  YKDAAHQ LG+SKELGNRFS VMAAHDIA FGALCALATF+P+E K  +
Sbjct: 241 LARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGALCALATFDPIEFKNFI 296

[Close]

BLAST of Lcy01g006150.1 vs. NCBI nr
Match: KAG7013361.1 (COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.0 bits (863), Expect = 2.2e-88
Identity = 178/282 (63.12%), Postives = 214/282 (75.89%), Query Frame = 0


Query: 1   MNFRRSEFVDDAGESEDNYRSTSGSDEEEKLNSPTPFLK-DKLIDIHAYASNYRRRMKIL 60
           M+F RS+    + + +DNY     SDEE K +SPTPFLK  K  DI AYASNY R  KIL
Sbjct: 1   MHFWRSKSDGHSNKPKDNY-GNFDSDEEGKGHSPTPFLKGGKHFDIQAYASNYHRSTKIL 60

Query: 61  RLVFIADRFGDSNERRRMTQLGALQIAYDEAKKGKDVALFTKIAEKIRGRLGPNYAMDEN 120
           RL+FIADRFG++NERRR  QL AL+IAYD AKKG DV +F KI  KI GRLGPNY MDEN
Sbjct: 61  RLIFIADRFGNANERRRRMQLEALRIAYDIAKKGNDVNVFIKIVRKIDGRLGPNYDMDEN 120

Query: 121 WRNSVNQEKQVISQMLQRCTKNSEICYANRIISADDARILFNAVADFHHIHGAPATAFEF 180
           W NSV + ++V+S+MLQRC KN E  Y  R I A+DAR +FN++A F+  HGA   A+ F
Sbjct: 121 WCNSVIEGRRVMSEMLQRCAKNCEKSYTERTICAEDARNVFNSIAVFYEDHGALTRAYAF 180

Query: 181 YKKSVRFCRTDEDLSEFLSRVLLTVIDLGQFEHVAKMAEKGIQNPKLNPMTTDSLRCALG 240
           YKKSV FCR+D++ SE L R+++ VI+LGQFE   ++AEKG+Q P LNP+T ++LRCALG
Sbjct: 181 YKKSVHFCRSDKNYSELLRRLIVVVIELGQFEASGEIAEKGMQYPNLNPITMETLRCALG 240

Query: 241 LARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGAL 282
           LARFKA  YKDAAHQ LG+SKELGNRFS VMAAHDIA FGAL
Sbjct: 241 LARFKAHCYKDAAHQLLGVSKELGNRFSKVMAAHDIATFGAL 281

[Close]

BLAST of Lcy01g006150.1 vs. TAIR 10
Match: AT3G61140.1 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain )

HSP 1 Score: 290.8 bits (743), Expect = 1.7e-78
Identity = 161/386 (41.71%), Postives = 237/386 (61.40%), Query Frame = 0


Query: 29  EKLNSPTPFLKDKLIDIHAYASNYRRRMKILRLVFIADRFGDSNERRRMTQLGALQIAYD 88
           E+ ++  P +  + +DI AYA+ Y+ R KI+RL+FIA+  G ++      Q  AL++AYD
Sbjct: 20  EETSNRRPIISGEPLDIEAYAALYKGRTKIMRLLFIANHCGGNH----ALQFDALRMAYD 79

Query: 89  EAKKGKDVALFTKIAEKIRGRLGPNYAMDENWRNSVNQEKQVISQMLQRCTKNSEICYAN 148
           E KKG++  LF ++  KI  RLG  Y MD  W  +V++  +     L+    N    Y  
Sbjct: 80  EIKKGENTQLFREVVNKIGNRLGEKYGMDLAWCEAVDRRAEQKKVKLE----NELSSYRT 139

Query: 149 RIISADDARILFNAVADFHHIHGAPATAFEFYKKSVRFCRTDEDLSEFLSRVLLTVIDLG 208
            +I  +  R+ +N   DF++  G    AF+ Y ++  +C T + +       +L  I++G
Sbjct: 140 NLIK-ESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMG 199

Query: 209 QFEHVAKMAEKGIQNPK-LNPMTTDSLRCALGLARFKAQRYKDAAHQFLGISKELGNRFS 268
           QF HV     K  QNP+ L PM    LRCA GLA  + ++YK AA +FL ++ ELGN ++
Sbjct: 200 QFTHVTSYVNKAEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYN 259

Query: 269 DVMAAHDIAAFGALCALATFEPLELKTLVMDNENFQFYLDSAVEVKELIKDFCTRRYSSF 328
           +V+A  DIA +G LCALA+F+  ELK  V+DN NF+ +L+   +V+ELI DF + RY+S 
Sbjct: 260 EVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASC 319

Query: 329 LKHFDNIKGWLLLDIHFYNHFDTLYDQIRCKALVQYTEPFVSIGLQRVAVVFGSSIEAIE 388
           L++  ++K  LLLDIH ++H DTLYDQIR KAL+QYT PFVS+ L R+A  F +S+  +E
Sbjct: 320 LEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLE 379

Query: 389 KDLVTLINTNQIQADIDPVDKVLRVR 414
           K+L  LI  NQIQA ID  +K+L  R
Sbjct: 380 KELEALITDNQIQARIDSHNKILYAR 396

[Close]

BLAST of Lcy01g006150.1 vs. TAIR 10
Match: AT3G12850.1 (COP9 signalosome complex-related / CSN complex-related )

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-09
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 43  IDIHAYASNYRRRMKILRLVFIADR-----FGDSNERRRMTQLGALQIAYDEAKKGK--- 102
           +D+ AY+ NY  R  +LRL+ IA+      F D  E      L AL++AYD  +      
Sbjct: 11  LDVEAYSRNYEGRNLVLRLLHIAENSVGPMFTDDLE------LEALRLAYDLIRNDGIVC 70

Query: 103 DVALFTKIAEKIRGRLGPNYAMDENWR----NSVNQEKQVISQMLQRCTKNSE 144
           D+ LFT IAEKI+GRLG  Y +DE WR    N+  ++  ++   L+  T   E
Sbjct: 71  DMRLFTVIAEKIQGRLGEGYLLDEKWRLTKNNNFVKQDSILRNDLESATDELE 117

[Close]

BLAST of Lcy01g006150.1 vs. TAIR 10
Match: AT4G24820.1 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain )

HSP 1 Score: 51.6 bits (122), Expect = 1.8e-06
Identity = 38/176 (21.59%), Postives = 71/176 (40.34%), Query Frame = 0


Query: 239 GLARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMD 298
           GL     + +K AA  FL           ++        +  L ++ T + + LK  V+D
Sbjct: 183 GLYCMSTRNFKKAASLFLDSISTFTT--YEIFPYETFIFYTVLTSIITLDRVSLKQKVVD 242

Query: 299 NENFQFYLDSAVEVKELIKDFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCK 358
                  L     + E +      +Y +F   F  +   +  D + Y HF     ++R  
Sbjct: 243 APEILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTV 302

Query: 359 ALVQYTEPFVSIGLQRVAVVFGSSIEAIEKDLVTLINTNQIQADIDPVDKVLRVRK 415
              Q+ E + S+ ++ +A  FG S++ I+++L   I   ++   ID V  VL   +
Sbjct: 303 VYSQFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNR 356

[Close]

BLAST of Lcy01g006150.1 vs. TAIR 10
Match: AT4G24820.2 (26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain )

HSP 1 Score: 51.6 bits (122), Expect = 1.8e-06
Identity = 38/176 (21.59%), Postives = 71/176 (40.34%), Query Frame = 0


Query: 239 GLARFKAQRYKDAAHQFLGISKELGNRFSDVMAAHDIAAFGALCALATFEPLELKTLVMD 298
           GL     + +K AA  FL           ++        +  L ++ T + + LK  V+D
Sbjct: 183 GLYCMSTRNFKKAASLFLDSISTFTT--YEIFPYETFIFYTVLTSIITLDRVSLKQKVVD 242

Query: 299 NENFQFYLDSAVEVKELIKDFCTRRYSSFLKHFDNIKGWLLLDIHFYNHFDTLYDQIRCK 358
                  L     + E +      +Y +F   F  +   +  D + Y HF     ++R  
Sbjct: 243 APEILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTV 302

Query: 359 ALVQYTEPFVSIGLQRVAVVFGSSIEAIEKDLVTLINTNQIQADIDPVDKVLRVRK 415
              Q+ E + S+ ++ +A  FG S++ I+++L   I   ++   ID V  VL   +
Sbjct: 303 VYSQFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNR 356

The following BLAST results are available for this feature:

BLAST of Lcy01g006150.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45432	2.4e-77	41.71	COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CSN1 PE=1 ...	[more]
Q54QX3	1.3e-49	32.49	COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=csn1 ...	[more]
Q6NRT5	7.9e-36	27.71	COP9 signalosome complex subunit 1 OS=Xenopus laevis OX=8355 GN=csn1 PE=2 SV=1	[more]
Q99LD4	1.6e-33	27.23	COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1	[more]
P97834	3.7e-33	26.99	COP9 signalosome complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Gps1 PE=1 SV...	[more]

BLAST of Lcy01g006150.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3C9	5.3e-144	64.23	COP9 signalosome complex subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KWI7	1.4e-96	63.97	COP9 signalosome complex subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498...	[more]
A0A067HDM6	3.8e-81	43.51	PCI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g013559mg PE=...	[more]
V4U862	3.8e-81	43.51	PCI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10020177mg...	[more]
A0A2P5CNT9	2.7e-79	42.86	26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit OS=Trema...	[more]

BLAST of Lcy01g006150.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958876.1	1.1e-143	64.23	COP9 signalosome complex subunit 1-like [Cucurbita moschata]	[more]
KAG6574781.1	7.1e-143	64.23	COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023005986.1	2.9e-96	63.97	COP9 signalosome complex subunit 1-like [Cucurbita maxima]	[more]
XP_023547756.1	5.0e-96	63.97	COP9 signalosome complex subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG7013361.1	2.2e-88	63.12	COP9 signalosome complex subunit 1, partial [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of Lcy01g006150.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61140.1	1.7e-78	41.71	26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain	[more]
AT3G12850.1	1.0e-09	37.17	COP9 signalosome complex-related / CSN complex-related	[more]
AT4G24820.1	1.8e-06	21.59	26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain	[more]
AT4G24820.2	1.8e-06	21.59	26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00753	PINT	coord: 346..415 e-value: 5.2E-5 score: 32.6
None	No IPR available	GENE3D	1.25.40.570		coord: 42..396 e-value: 1.2E-89 score: 302.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 346..415 e-value: 5.2E-5 score: 32.6
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 312..413 e-value: 9.0E-13 score: 48.7
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 232..415 score: 14.188356
IPR045135	26S proteasome regulatory subunit Rpn7, N-terminal	PFAM	PF10602	RPN7	coord: 155..294 e-value: 5.3E-11 score: 42.5
IPR019585	26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1	PANTHER	PTHR14145	26S PROTESOME SUBUNIT 6	coord: 26..414
IPR033008	COP9 signalosome complex subunit 1	PANTHER	PTHR14145:SF2	COP9 SIGNALOSOME COMPLEX SUBUNIT 1	coord: 26..414
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 341..413

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lcy01g006150	Lcy01g006150	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy01g006150.1.exon6	Lcy01g006150.1.exon6	exon
Lcy01g006150.1.exon5	Lcy01g006150.1.exon5	exon
Lcy01g006150.1.exon4	Lcy01g006150.1.exon4	exon
Lcy01g006150.1.exon3	Lcy01g006150.1.exon3	exon
Lcy01g006150.1.exon2	Lcy01g006150.1.exon2	exon
Lcy01g006150.1.exon1	Lcy01g006150.1.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy01g006150.1.utr3p1	Lcy01g006150.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lcy01g006150.1.cds6	Lcy01g006150.1.cds6	CDS
Lcy01g006150.1.cds5	Lcy01g006150.1.cds5	CDS
Lcy01g006150.1.cds4	Lcy01g006150.1.cds4	CDS
Lcy01g006150.1.cds3	Lcy01g006150.1.cds3	CDS
Lcy01g006150.1.cds2	Lcy01g006150.1.cds2	CDS
Lcy01g006150.1.cds1	Lcy01g006150.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lcy01g006150.1	Lcy01g006150.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000338	protein deneddylation
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0005737	cytoplasm