Lag0040395.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0040395.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr13: 4434709 .. 4435951 (+)
Sequence length	876
RNA-Seq Expression	Lag0040395.1
Synteny	Lag0040395.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTTAGGGTTCCGGTGAGCAAGGGTGAGGTGGAGGCGGCGATCGGTGAGCAGGGCTTGTGAATCGGCGATCGGTGAACAAATCCGTGTGGTGCAGGCGGCGAACGGTGACCTGGGGAGCGAGCTTGCAGTGGAGGCGGCGATTGGTGAAGCGGTGAGCGGCGAGACCGTGAACGGGTTTTGCTGGTGCGAGTCGCGGCTGTGGGATGGAGGCGACGGTCAGTGCTTCGATACAGGTGTAGGCGACGGCAAGGCTGAGCGAGCGTGACTGTGGAGCGTGACTGTGAAGCGGTGAGCGGCGAGACTGTGGAGCGTGGACTGTGCGAGTCGCGGCTGTGGACTCCTTTTTCCGGCGAGCGTGCGTTTGGAGGCGGTGAACAGAGTACAGAGGGCAGCTATCTGATTTCAGGTGTGCGGCGCGGTGGTGCGTGCGGCGGAGCAGAGGGTCTGGTTCCGGCGAGAGCTTGTGTTGAATTAGATGTTTCTTCGGCGATTGGAGGGGTGGCGCGACGGTAAGTGTGGTTTTTCTGCAGTTTTGGTTTCTATGTGGCGGTTTGTTTTGGTGGGTTCCTAGTGTGGGTCTTGGGTTGATTGTGGGGTTGAGCGTCTGTGTTTTGTGGTACGGTTTTGTTGCGATCTTGGGTCTGGTTGGCGAGGAGGTTGTCGGATGTGTGTGTAAAGGTTGTCGTGGTGGGCTGTGAGACTGTGATGTCTGATTGAGTACAGTTGGGTGAAGGGAGTTTTGGTGATGGATGACTTGGTGAAAAAGTGGAAGTCGTGGTCACTTACTGGGGAGGAGGCGGAGGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATCTATGTGTGGTTGGTAAGGTTCTATCATCCAAGCGAGTCAATCCAGAGGCCTTTCGGAATGTGATGCGGTCAGCATGGAGGGTTCACAATGCGACGCGTGTGGAGCCAGCGGGAGAGAACGTCTTTGTTATTCAGTTTCGTACCAGAGGGGAGAAGTCGCGAGTTCTAGGAACGGGTCCTTGGGCCTTTGACCGGTCCCTTATTGTGCTTACGGAGCCCAAGGATGTTGCATCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTCTGGGTGCAGATTCATAATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGTTCAAATGAGAATGATTGGATAG

mRNA sequence

ATGAAGGTTAGGGTTCCGGCGGCGAACGGTGACCTGGGGAGCGAGCTTGCAGTGGAGGCGGCGATTGGTGAAGCGGTGAGCGGCGAGACCGTGAACGGGTTTTGCTGGTGCGAGTCGCGGCTGTGGGATGGAGGCGACGCGGTGAGCGGCGAGACTGTGGAGCGTGGACTGTGCGAGTCGCGGCTGTGGACTCCTTTTTCCGGCGAGCGTGCGTTTGGAGGCGGTGAACAGAGTACAGAGGGCAGCTATCTGATTTCAGGTGTGCGGCGCGGTGGTGCGTGCGGCGGAGCAGAGGGTCTGGTTCCGGCGAGAGCTTGTGTTGAATTAGATGTTTCTTCGGCGATTGGAGGGGTGGCGCGACGTTGGGTGAAGGGAGTTTTGGTGATGGATGACTTGGTGAAAAAGTGGAAGTCGTGGTCACTTACTGGGGAGGAGGCGGAGGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATCTATGTGTGGTTGGTAAGGTTCTATCATCCAAGCGAGTCAATCCAGAGGCCTTTCGGAATGTGATGCGGTCAGCATGGAGGGTTCACAATGCGACGCGTGTGGAGCCAGCGGGAGAGAACGTCTTTGTTATTCAGTTTCGTACCAGAGGGGAGAAGTCGCGAGTTCTAGGAACGGGTCCTTGGGCCTTTGACCGGTCCCTTATTGTGCTTACGGAGCCCAAGGATGTTGCATCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTCTGGGTGCAGATTCATAATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGTTCAAATGAGAATGATTGGATAG

Coding sequence (CDS)

ATGAAGGTTAGGGTTCCGGCGGCGAACGGTGACCTGGGGAGCGAGCTTGCAGTGGAGGCGGCGATTGGTGAAGCGGTGAGCGGCGAGACCGTGAACGGGTTTTGCTGGTGCGAGTCGCGGCTGTGGGATGGAGGCGACGCGGTGAGCGGCGAGACTGTGGAGCGTGGACTGTGCGAGTCGCGGCTGTGGACTCCTTTTTCCGGCGAGCGTGCGTTTGGAGGCGGTGAACAGAGTACAGAGGGCAGCTATCTGATTTCAGGTGTGCGGCGCGGTGGTGCGTGCGGCGGAGCAGAGGGTCTGGTTCCGGCGAGAGCTTGTGTTGAATTAGATGTTTCTTCGGCGATTGGAGGGGTGGCGCGACGTTGGGTGAAGGGAGTTTTGGTGATGGATGACTTGGTGAAAAAGTGGAAGTCGTGGTCACTTACTGGGGAGGAGGCGGAGGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATCTATGTGTGGTTGGTAAGGTTCTATCATCCAAGCGAGTCAATCCAGAGGCCTTTCGGAATGTGATGCGGTCAGCATGGAGGGTTCACAATGCGACGCGTGTGGAGCCAGCGGGAGAGAACGTCTTTGTTATTCAGTTTCGTACCAGAGGGGAGAAGTCGCGAGTTCTAGGAACGGGTCCTTGGGCCTTTGACCGGTCCCTTATTGTGCTTACGGAGCCCAAGGATGTTGCATCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTCTGGGTGCAGATTCATAATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGTTCAAATGAGAATGATTGGATAG

Protein sequence

MKVRVPAANGDLGSELAVEAAIGEAVSGETVNGFCWCESRLWDGGDAVSGETVERGLCESRLWTPFSGERAFGGGEQSTEGSYLISGVRRGGACGGAEGLVPARACVELDVSSAIGGVARRWVKGVLVMDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLGWLRRWAVQMRMIG

Homology

[Close]

BLAST of Lag0040395.1 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 146.0 bits (367), Expect = 5.2e-31
Identity = 67/150 (44.67%), Postives = 97/150 (64.67%), Query Frame = 0


Query: 129 MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRS 188
           MD++   W+ +  T +E E +        L+A ++ LCVV K+ +SKR++ EA R+VM+S
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60

Query: 189 AWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEF 248
            WRVHN+TR EP G N++VI F++  EKSRVL +GPW F++SL+VLT P      L+  F
Sbjct: 61  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120

Query: 249 KDCPFWVQIHNVPMKWQTRGWAQHLEARLG 279
             C FW+QIHN+P +  +   A  L A+LG
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLG 150

[Close]

BLAST of Lag0040395.1 vs. NCBI nr
Match: XP_022158119.1 (uncharacterized protein LOC111024676, partial [Momordica charantia])

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-30
Identity = 65/150 (43.33%), Postives = 98/150 (65.33%), Query Frame = 0


Query: 129 MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRS 188
           MD++ + W++++LT EE E          L+A ++ LC VGK+ +SKR++ +A  +VM+ 
Sbjct: 1   MDEITELWENFNLTNEEEETFIVDNQQPILTAENIQLCGVGKLHTSKRISAKALASVMKQ 60

Query: 189 AWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEF 248
            W++H +TR+E AG N++VI F+T  EK RVL +GPW FD+SL VL  P      L+ +F
Sbjct: 61  VWKIHESTRIEAAGLNIYVIAFKTMVEKKRVLSSGPWTFDKSLFVLVSPTAADKPLDVDF 120

Query: 249 KDCPFWVQIHNVPMKWQTRGWAQHLEARLG 279
           + C FWVQIH +P ++ TR  A+ L  RLG
Sbjct: 121 RFCAFWVQIHCIPFEYLTRDMAKLLGDRLG 150

[Close]

BLAST of Lag0040395.1 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-28
Identity = 63/150 (42.00%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 129 MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRS 188
           MDD+ K W++++L  EE + I        L+  ++ LC VGK+  SKR+  EAF +VM+ 
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 189 AWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEF 248
            W++HN+TR+E AG N++VI F+T  EK RV   GPW FD+SL++L         L+ + 
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 249 KDCPFWVQIHNVPMKWQTRGWAQHLEARLG 279
             C FWVQIH +  +  T+  A+ L ARLG
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLG 150

[Close]

BLAST of Lag0040395.1 vs. NCBI nr
Match: XP_022155933.1 (uncharacterized protein LOC111022932 [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 5.5e-25
Identity = 57/150 (38.00%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 129 MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRS 188
           MD++ + W++++LT E+ E I   +    ++  ++    VGK+ +SKR++ EAFR+VM+S
Sbjct: 1   MDEITELWENFTLTKEKEETIIIDSEKPLMTPENVQRYAVGKLHTSKRISVEAFRSVMKS 60

Query: 189 AWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEF 248
            W+VH +T +E AG N++VI F++  EK+RVL +GPW+F+ SL+VLT P       +  F
Sbjct: 61  LWKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNF 120

Query: 249 KDCPFWVQIHNVPMKWQTRGWAQHLEARLG 279
                W+QIH +P +   +  A+ L  R+G
Sbjct: 121 NFFALWIQIHCIPFQCMIKDMAKFLGTRIG 150

[Close]

BLAST of Lag0040395.1 vs. NCBI nr
Match: XP_015388532.1 (uncharacterized protein LOC107178176 [Citrus sinensis])

HSP 1 Score: 122.5 bits (306), Expect = 6.1e-24
Identity = 56/149 (37.58%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 130 DDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSA 189
           ++L++K ++ +L  EE  +I  G          +  C+VGK+L ++ V  E  R  M+ A
Sbjct: 4   EELIRKCEAITLQSEEDNMISFGRNMKVRGERLVAHCLVGKILQTRSVPREGLRAAMQQA 63

Query: 190 WRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEFK 249
           WR    T+VE  G+N+F+ +F ++ EK R+L  GPW FDRSL+V+TEP  +  V + +F 
Sbjct: 64  WRTTKETKVESLGDNIFIFKFASKSEKKRILFGGPWHFDRSLMVVTEPMGIGDVKKQDFT 123

Query: 250 DCPFWVQIHNVPMKWQTRGWAQHLEARLG 279
             PFWVQIHN+P+    +   Q +  R+G
Sbjct: 124 HAPFWVQIHNIPIMCMDKEIIQEIGGRIG 152

[Close]

BLAST of Lag0040395.1 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.5e-31
Identity = 67/150 (44.67%), Postives = 97/150 (64.67%), Query Frame = 0


Query: 129 MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRS 188
           MD++   W+ +  T +E E +        L+A ++ LCVV K+ +SKR++ EA R+VM+S
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60

Query: 189 AWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEF 248
            WRVHN+TR EP G N++VI F++  EKSRVL +GPW F++SL+VLT P      L+  F
Sbjct: 61  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120

Query: 249 KDCPFWVQIHNVPMKWQTRGWAQHLEARLG 279
             C FW+QIHN+P +  +   A  L A+LG
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLG 150

[Close]

BLAST of Lag0040395.1 vs. ExPASy TrEMBL
Match: A0A6J1DYG3 (uncharacterized protein LOC111024676 OS=Momordica charantia OX=3673 GN=LOC111024676 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.6e-31
Identity = 65/150 (43.33%), Postives = 98/150 (65.33%), Query Frame = 0


Query: 129 MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRS 188
           MD++ + W++++LT EE E          L+A ++ LC VGK+ +SKR++ +A  +VM+ 
Sbjct: 1   MDEITELWENFNLTNEEEETFIVDNQQPILTAENIQLCGVGKLHTSKRISAKALASVMKQ 60

Query: 189 AWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEF 248
            W++H +TR+E AG N++VI F+T  EK RVL +GPW FD+SL VL  P      L+ +F
Sbjct: 61  VWKIHESTRIEAAGLNIYVIAFKTMVEKKRVLSSGPWTFDKSLFVLVSPTAADKPLDVDF 120

Query: 249 KDCPFWVQIHNVPMKWQTRGWAQHLEARLG 279
           + C FWVQIH +P ++ TR  A+ L  RLG
Sbjct: 121 RFCAFWVQIHCIPFEYLTRDMAKLLGDRLG 150

[Close]

BLAST of Lag0040395.1 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.2e-29
Identity = 63/150 (42.00%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 129 MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRS 188
           MDD+ K W++++L  EE + I        L+  ++ LC VGK+  SKR+  EAF +VM+ 
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 189 AWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEF 248
            W++HN+TR+E AG N++VI F+T  EK RV   GPW FD+SL++L         L+ + 
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 249 KDCPFWVQIHNVPMKWQTRGWAQHLEARLG 279
             C FWVQIH +  +  T+  A+ L ARLG
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLG 150

[Close]

BLAST of Lag0040395.1 vs. ExPASy TrEMBL
Match: A0A6J1DP89 (uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022932 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.7e-25
Identity = 57/150 (38.00%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 129 MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRS 188
           MD++ + W++++LT E+ E I   +    ++  ++    VGK+ +SKR++ EAFR+VM+S
Sbjct: 1   MDEITELWENFTLTKEKEETIIIDSEKPLMTPENVQRYAVGKLHTSKRISVEAFRSVMKS 60

Query: 189 AWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEF 248
            W+VH +T +E AG N++VI F++  EK+RVL +GPW+F+ SL+VLT P       +  F
Sbjct: 61  LWKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNF 120

Query: 249 KDCPFWVQIHNVPMKWQTRGWAQHLEARLG 279
                W+QIH +P +   +  A+ L  R+G
Sbjct: 121 NFFALWIQIHCIPFQCMIKDMAKFLGTRIG 150

[Close]

BLAST of Lag0040395.1 vs. ExPASy TrEMBL
Match: A0A5C7HK10 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018452 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-22
Identity = 47/151 (31.13%), Postives = 85/151 (56.29%), Query Frame = 0


Query: 131 DLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAW 190
           ++ K ++  S+  E++ +            A++D+C+VGK++S K+ N EAF+N++   W
Sbjct: 5   EIAKLYEKLSIADEDSAIYEMAEEDQLEGVAEVDICLVGKIISGKKANREAFKNLIEKLW 64

Query: 191 RVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEFKD 250
                  +E  G N+FV  F  + E++R+   GPW FD SLI L +P+ + ++   +F  
Sbjct: 65  SQFGRVEIESVGVNIFVFHFNNQEERNRIWNRGPWYFDNSLIALEKPEGMGNISNLKFNK 124

Query: 251 CPFWVQIHNVPMKWQTRGWAQHLEARLGWLR 282
              W+QIH+VP+    R  A+ +  ++GWL+
Sbjct: 125 VEMWIQIHDVPIMCMNRKAAKWMANQIGWLK 155

[Close]

BLAST of Lag0040395.1 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 45.4 bits (106), Expect = 8.8e-05
Identity = 23/73 (31.51%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 208 IQFRTRGEKS--RVLGTGPWAFDRSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQ 267
           I+F  + E+S   +L  GPW+F+  + V+     + S  + EFK  PFW+QI  +P+++ 
Sbjct: 62  IEFLFQSEESMFSILRRGPWSFNDWMCVIQRWTKLHS--DAEFKRIPFWIQIRGIPLRFL 121

Query: 268 TRGWAQHLEARLG 279
           T      +  R+G
Sbjct: 122 TARIITSIGERMG 132

The following BLAST results are available for this feature:

BLAST of Lag0040395.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149484.1	5.2e-31	44.67	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
XP_022158119.1	1.1e-30	43.33	uncharacterized protein LOC111024676, partial [Momordica charantia]	[more]
XP_022156711.1	1.1e-28	42.00	uncharacterized protein LOC111023555 [Momordica charantia]	[more]
XP_022155933.1	5.5e-25	38.00	uncharacterized protein LOC111022932 [Momordica charantia]	[more]
XP_015388532.1	6.1e-24	37.58	uncharacterized protein LOC107178176 [Citrus sinensis]	[more]

BLAST of Lag0040395.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0040395.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D765	2.5e-31	44.67	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DYG3	5.6e-31	43.33	uncharacterized protein LOC111024676 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DVS4	5.2e-29	42.00	uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DP89	2.7e-25	38.00	uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A5C7HK10	2.1e-22	31.13	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01845...	[more]

BLAST of Lag0040395.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42140.1	8.8e-05	31.51	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 160..278 e-value: 2.4E-16 score: 59.5

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0040395	Lag0040395	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0040395.1.exon1	Lag0040395.1.exon1	exon
Lag0040395.1.exon2	Lag0040395.1.exon2	exon
Lag0040395.1.exon3	Lag0040395.1.exon3	exon
Lag0040395.1.exon4	Lag0040395.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0040395.1	cds.Lag0040395.1	CDS
cds.Lag0040395.1	cds.Lag0040395.1_2	CDS
cds.Lag0040395.1	cds.Lag0040395.1_3	CDS
cds.Lag0040395.1	cds.Lag0040395.1_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0040395.1	Lag0040395.1-protein	polypeptide