
Lag0040395 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGTTAGGGTTCCGGTGAGCAAGGGTGAGGTGGAGGCGGCGATCGGTGAGCAGGGCTTGTGAATCGGCGATCGGTGAACAAATCCGTGTGGTGCAGGCGGCGAACGGTGACCTGGGGAGCGAGCTTGCAGTGGAGGCGGCGATTGGTGAAGCGGTGAGCGGCGAGACCGTGAACGGGTTTTGCTGGTGCGAGTCGCGGCTGTGGGATGGAGGCGACGGTCAGTGCTTCGATACAGGTGTAGGCGACGGCAAGGCTGAGCGAGCGTGACTGTGGAGCGTGACTGTGAAGCGGTGAGCGGCGAGACTGTGGAGCGTGGACTGTGCGAGTCGCGGCTGTGGACTCCTTTTTCCGGCGAGCGTGCGTTTGGAGGCGGTGAACAGAGTACAGAGGGCAGCTATCTGATTTCAGGTGTGCGGCGCGGTGGTGCGTGCGGCGGAGCAGAGGGTCTGGTTCCGGCGAGAGCTTGTGTTGAATTAGATGTTTCTTCGGCGATTGGAGGGGTGGCGCGACGGTAAGTGTGGTTTTTCTGCAGTTTTGGTTTCTATGTGGCGGTTTGTTTTGGTGGGTTCCTAGTGTGGGTCTTGGGTTGATTGTGGGGTTGAGCGTCTGTGTTTTGTGGTACGGTTTTGTTGCGATCTTGGGTCTGGTTGGCGAGGAGGTTGTCGGATGTGTGTGTAAAGGTTGTCGTGGTGGGCTGTGAGACTGTGATGTCTGATTGAGTACAGTTGGGTGAAGGGAGTTTTGGTGATGGATGACTTGGTGAAAAAGTGGAAGTCGTGGTCACTTACTGGGGAGGAGGCGGAGGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATCTATGTGTGGTTGGTAAGGTTCTATCATCCAAGCGAGTCAATCCAGAGGCCTTTCGGAATGTGATGCGGTCAGCATGGAGGGTTCACAATGCGACGCGTGTGGAGCCAGCGGGAGAGAACGTCTTTGTTATTCAGTTTCGTACCAGAGGGGAGAAGTCGCGAGTTCTAGGAACGGGTCCTTGGGCCTTTGACCGGTCCCTTATTGTGCTTACGGAGCCCAAGGATGTTGCATCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTCTGGGTGCAGATTCATAATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGTTCAAATGAGAATGATTGGATAG ATGAAGGTTAGGGTTCCGGCGGCGAACGGTGACCTGGGGAGCGAGCTTGCAGTGGAGGCGGCGATTGGTGAAGCGGTGAGCGGCGAGACCGTGAACGGGTTTTGCTGGTGCGAGTCGCGGCTGTGGGATGGAGGCGACGCGGTGAGCGGCGAGACTGTGGAGCGTGGACTGTGCGAGTCGCGGCTGTGGACTCCTTTTTCCGGCGAGCGTGCGTTTGGAGGCGGTGAACAGAGTACAGAGGGCAGCTATCTGATTTCAGGTGTGCGGCGCGGTGGTGCGTGCGGCGGAGCAGAGGGTCTGGTTCCGGCGAGAGCTTGTGTTGAATTAGATGTTTCTTCGGCGATTGGAGGGGTGGCGCGACGTTGGGTGAAGGGAGTTTTGGTGATGGATGACTTGGTGAAAAAGTGGAAGTCGTGGTCACTTACTGGGGAGGAGGCGGAGGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATCTATGTGTGGTTGGTAAGGTTCTATCATCCAAGCGAGTCAATCCAGAGGCCTTTCGGAATGTGATGCGGTCAGCATGGAGGGTTCACAATGCGACGCGTGTGGAGCCAGCGGGAGAGAACGTCTTTGTTATTCAGTTTCGTACCAGAGGGGAGAAGTCGCGAGTTCTAGGAACGGGTCCTTGGGCCTTTGACCGGTCCCTTATTGTGCTTACGGAGCCCAAGGATGTTGCATCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTCTGGGTGCAGATTCATAATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGTTCAAATGAGAATGATTGGATAG ATGAAGGTTAGGGTTCCGGCGGCGAACGGTGACCTGGGGAGCGAGCTTGCAGTGGAGGCGGCGATTGGTGAAGCGGTGAGCGGCGAGACCGTGAACGGGTTTTGCTGGTGCGAGTCGCGGCTGTGGGATGGAGGCGACGCGGTGAGCGGCGAGACTGTGGAGCGTGGACTGTGCGAGTCGCGGCTGTGGACTCCTTTTTCCGGCGAGCGTGCGTTTGGAGGCGGTGAACAGAGTACAGAGGGCAGCTATCTGATTTCAGGTGTGCGGCGCGGTGGTGCGTGCGGCGGAGCAGAGGGTCTGGTTCCGGCGAGAGCTTGTGTTGAATTAGATGTTTCTTCGGCGATTGGAGGGGTGGCGCGACGTTGGGTGAAGGGAGTTTTGGTGATGGATGACTTGGTGAAAAAGTGGAAGTCGTGGTCACTTACTGGGGAGGAGGCGGAGGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATCTATGTGTGGTTGGTAAGGTTCTATCATCCAAGCGAGTCAATCCAGAGGCCTTTCGGAATGTGATGCGGTCAGCATGGAGGGTTCACAATGCGACGCGTGTGGAGCCAGCGGGAGAGAACGTCTTTGTTATTCAGTTTCGTACCAGAGGGGAGAAGTCGCGAGTTCTAGGAACGGGTCCTTGGGCCTTTGACCGGTCCCTTATTGTGCTTACGGAGCCCAAGGATGTTGCATCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTCTGGGTGCAGATTCATAATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGTTCAAATGAGAATGATTGGATAG MKVRVPAANGDLGSELAVEAAIGEAVSGETVNGFCWCESRLWDGGDAVSGETVERGLCESRLWTPFSGERAFGGGEQSTEGSYLISGVRRGGACGGAEGLVPARACVELDVSSAIGGVARRWVKGVLVMDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLGWLRRWAVQMRMIG Homology
BLAST of Lag0040395 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia]) HSP 1 Score: 146.0 bits (367), Expect = 5.2e-31 Identity = 67/150 (44.67%), Postives = 97/150 (64.67%), Query Frame = 0
BLAST of Lag0040395 vs. NCBI nr
Match: XP_022158119.1 (uncharacterized protein LOC111024676, partial [Momordica charantia]) HSP 1 Score: 144.8 bits (364), Expect = 1.1e-30 Identity = 65/150 (43.33%), Postives = 98/150 (65.33%), Query Frame = 0
BLAST of Lag0040395 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia]) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-28 Identity = 63/150 (42.00%), Postives = 92/150 (61.33%), Query Frame = 0
BLAST of Lag0040395 vs. NCBI nr
Match: XP_022155933.1 (uncharacterized protein LOC111022932 [Momordica charantia]) HSP 1 Score: 125.9 bits (315), Expect = 5.5e-25 Identity = 57/150 (38.00%), Postives = 95/150 (63.33%), Query Frame = 0
BLAST of Lag0040395 vs. NCBI nr
Match: XP_015388532.1 (uncharacterized protein LOC107178176 [Citrus sinensis]) HSP 1 Score: 122.5 bits (306), Expect = 6.1e-24 Identity = 56/149 (37.58%), Postives = 88/149 (59.06%), Query Frame = 0
BLAST of Lag0040395 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 2.5e-31 Identity = 67/150 (44.67%), Postives = 97/150 (64.67%), Query Frame = 0
BLAST of Lag0040395 vs. ExPASy TrEMBL
Match: A0A6J1DYG3 (uncharacterized protein LOC111024676 OS=Momordica charantia OX=3673 GN=LOC111024676 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 5.6e-31 Identity = 65/150 (43.33%), Postives = 98/150 (65.33%), Query Frame = 0
BLAST of Lag0040395 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 5.2e-29 Identity = 63/150 (42.00%), Postives = 92/150 (61.33%), Query Frame = 0
BLAST of Lag0040395 vs. ExPASy TrEMBL
Match: A0A6J1DP89 (uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022932 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.7e-25 Identity = 57/150 (38.00%), Postives = 95/150 (63.33%), Query Frame = 0
BLAST of Lag0040395 vs. ExPASy TrEMBL
Match: A0A5C7HK10 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018452 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.1e-22 Identity = 47/151 (31.13%), Postives = 85/151 (56.29%), Query Frame = 0
BLAST of Lag0040395 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 45.4 bits (106), Expect = 8.8e-05 Identity = 23/73 (31.51%), Postives = 40/73 (54.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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