Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGGAAGAAATTTTGCCAAGCAGAGGGAAGCAAGGGCAAAGGCATTGCTGAAGCATCAGGTGAAGCTGACGAGATTGAGGAACCAAGATTACCGTACAATCGCTTCATCAATAACCTTGCTCGGGCAAAGTATGTTGAGATGCTGAGACGAGACTTCCTATTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGCGAACCTCGGCTGGAGTCAATTTTGTGCGAAGCCGGAACCTGTTAATTCCAACATTGTTCGGGAATTTTACGCAAATATTGACGATCAGGAAGAATTTCAGGTTATAGTTCGAGGGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATTCTTTGTTCAACCTCCAGGACTTTCCGCACGCAGGCTTTAATGAGATGGTGGTGCACGTCTAGTGACCAACTAAATGCGGATGTCCGAGAGGTTGGCATTGAGGGGGCCCAGTGGAGACTATCGAAGACGGAAAATGCACATTTCAGCTGCTTATTTGAAGAGCGAGGCCAATACGTGGATGGGTTTCATTAA mRNA sequence ATGAGGAAGAAATTTTGCCAAGCAGAGGGAAGCAAGGGCAAAGGCATTGCTGAAGCATCAGGTGAAGCTGACGAGATTGAGGAACCAAGATTACCGTACAATCGCTTCATCAATAACCTTGCTCGGGCAAAGTATGTTGAGATGCTGAGACGAGACTTCCTATTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGCGAACCTCGGCTGGAGTCAATTTTGTGCGAAGCCGGAACCTGTTAATTCCAACATTGTTCGGGAATTTTACGCAAATATTGACGATCAGGAAGAATTTCAGGTTATAGTTCGAGGGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATTCTTTGTTCAACCTCCAGGACTTTCCGCACGCAGGCTTTAATGAGATGGTGGTGCACGTCTAGTGACCAACTAAATGCGGATGTCCGAGAGGTTGGCATTGAGGGGGCCCAGTGGAGACTATCGAAGACGGAAAATGCACATTTCAGCTGCTTATTTGAAGAGCGAGGCCAATACGTGGATGGGTTTCATTAA Coding sequence (CDS) ATGAGGAAGAAATTTTGCCAAGCAGAGGGAAGCAAGGGCAAAGGCATTGCTGAAGCATCAGGTGAAGCTGACGAGATTGAGGAACCAAGATTACCGTACAATCGCTTCATCAATAACCTTGCTCGGGCAAAGTATGTTGAGATGCTGAGACGAGACTTCCTATTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGCGAACCTCGGCTGGAGTCAATTTTGTGCGAAGCCGGAACCTGTTAATTCCAACATTGTTCGGGAATTTTACGCAAATATTGACGATCAGGAAGAATTTCAGGTTATAGTTCGAGGGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATTCTTTGTTCAACCTCCAGGACTTTCCGCACGCAGGCTTTAATGAGATGGTGGTGCACGTCTAGTGACCAACTAAATGCGGATGTCCGAGAGGTTGGCATTGAGGGGGCCCAGTGGAGACTATCGAAGACGGAAAATGCACATTTCAGCTGCTTATTTGAAGAGCGAGGCCAATACGTGGATGGGTTTCATTAA Protein sequence MRKKFCQAEGSKGKGIAEASGEADEIEEPRLPYNRFINNLARAKYVEMLRRDFLFERGFGDDLPRFLRTGIANLGWSQFCAKPEPVNSNIVREFYANIDDQEEFQVIVRGCPLTGAQEPLILCSTSRTFRTQALMRWWCTSSDQLNADVREVGIEGAQWRLSKTENAHFSCLFEERGQYVDGFH
Homology
BLAST of Lag0038667.1 vs. NCBI nr
Match: XP_022845662.1 (uncharacterized protein LOC111368573 isoform X1 [Olea europaea var. sylvestris]) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-04 Identity = 41/140 (29.29%), Postives = 71/140 (50.71%), Query Frame = 0 Query: 35 RFINNLARAKYVE-MLRRDFLFERGFGDDLPRFLRTGIANLGWSQFCAKPEPVNSNIVRE 94 RFI+ A+ +Y + ++ R+ + ERG L FL I +LGW +F +P V+ +V+E Sbjct: 22 RFISPEAKERYKQNVIHRNCIPERG----LENFLPDKIHSLGWEKFTEQPTAVSIPLVKE 81
Query: 95 FYANIDDQEEFQVIVRGCPLTGAQEPLILCSTSRTFRTQALMR-WWCTSSDQ---LNADV 154 FY N ++ E F+V V + S +R + TQ + + D+ L+ + Sbjct: 82 FYVNANEHENFKVFVWAFWIKFGS-----FSINRFYHTQDIPNDDYSRLRDEGVDLDEII 141
Query: 155 REVGIEGAQWRLSKTENAHF 170 R + GA+W+ S ++ HF Sbjct: 142 RTIARLGAEWKRSASDVTHF 152
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022845662.1 | 1.5e-04 | 29.29 | uncharacterized protein LOC111368573 isoform X1 [Olea europaea var. sylvestris] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
Lag0038667 | Lag0038667 | gene |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Lag0038667.1.exon1 | Lag0038667.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
cds.Lag0038667.1 | cds.Lag0038667.1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Lag0038667.1 | Lag0038667.1-protein | polypeptide |
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