Lag0038667 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0038667
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr2: 22849622 .. 22850176 (+)
RNA-Seq ExpressionLag0038667
SyntenyLag0038667
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAGAAATTTTGCCAAGCAGAGGGAAGCAAGGGCAAAGGCATTGCTGAAGCATCAGGTGAAGCTGACGAGATTGAGGAACCAAGATTACCGTACAATCGCTTCATCAATAACCTTGCTCGGGCAAAGTATGTTGAGATGCTGAGACGAGACTTCCTATTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGCGAACCTCGGCTGGAGTCAATTTTGTGCGAAGCCGGAACCTGTTAATTCCAACATTGTTCGGGAATTTTACGCAAATATTGACGATCAGGAAGAATTTCAGGTTATAGTTCGAGGGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATTCTTTGTTCAACCTCCAGGACTTTCCGCACGCAGGCTTTAATGAGATGGTGGTGCACGTCTAGTGACCAACTAAATGCGGATGTCCGAGAGGTTGGCATTGAGGGGGCCCAGTGGAGACTATCGAAGACGGAAAATGCACATTTCAGCTGCTTATTTGAAGAGCGAGGCCAATACGTGGATGGGTTTCATTAA

mRNA sequence

ATGAGGAAGAAATTTTGCCAAGCAGAGGGAAGCAAGGGCAAAGGCATTGCTGAAGCATCAGGTGAAGCTGACGAGATTGAGGAACCAAGATTACCGTACAATCGCTTCATCAATAACCTTGCTCGGGCAAAGTATGTTGAGATGCTGAGACGAGACTTCCTATTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGCGAACCTCGGCTGGAGTCAATTTTGTGCGAAGCCGGAACCTGTTAATTCCAACATTGTTCGGGAATTTTACGCAAATATTGACGATCAGGAAGAATTTCAGGTTATAGTTCGAGGGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATTCTTTGTTCAACCTCCAGGACTTTCCGCACGCAGGCTTTAATGAGATGGTGGTGCACGTCTAGTGACCAACTAAATGCGGATGTCCGAGAGGTTGGCATTGAGGGGGCCCAGTGGAGACTATCGAAGACGGAAAATGCACATTTCAGCTGCTTATTTGAAGAGCGAGGCCAATACGTGGATGGGTTTCATTAA

Coding sequence (CDS)

ATGAGGAAGAAATTTTGCCAAGCAGAGGGAAGCAAGGGCAAAGGCATTGCTGAAGCATCAGGTGAAGCTGACGAGATTGAGGAACCAAGATTACCGTACAATCGCTTCATCAATAACCTTGCTCGGGCAAAGTATGTTGAGATGCTGAGACGAGACTTCCTATTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGCGAACCTCGGCTGGAGTCAATTTTGTGCGAAGCCGGAACCTGTTAATTCCAACATTGTTCGGGAATTTTACGCAAATATTGACGATCAGGAAGAATTTCAGGTTATAGTTCGAGGGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATTCTTTGTTCAACCTCCAGGACTTTCCGCACGCAGGCTTTAATGAGATGGTGGTGCACGTCTAGTGACCAACTAAATGCGGATGTCCGAGAGGTTGGCATTGAGGGGGCCCAGTGGAGACTATCGAAGACGGAAAATGCACATTTCAGCTGCTTATTTGAAGAGCGAGGCCAATACGTGGATGGGTTTCATTAA

Protein sequence

MRKKFCQAEGSKGKGIAEASGEADEIEEPRLPYNRFINNLARAKYVEMLRRDFLFERGFGDDLPRFLRTGIANLGWSQFCAKPEPVNSNIVREFYANIDDQEEFQVIVRGCPLTGAQEPLILCSTSRTFRTQALMRWWCTSSDQLNADVREVGIEGAQWRLSKTENAHFSCLFEERGQYVDGFH
Homology
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BLAST of Lag0038667 vs. NCBI nr
Match: XP_022845662.1 (uncharacterized protein LOC111368573 isoform X1 [Olea europaea var. sylvestris])

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-04
Identity = 41/140 (29.29%), Postives = 71/140 (50.71%), Query Frame = 0 

Query: 35  RFINNLARAKYVE-MLRRDFLFERGFGDDLPRFLRTGIANLGWSQFCAKPEPVNSNIVRE 94
           RFI+  A+ +Y + ++ R+ + ERG    L  FL   I +LGW +F  +P  V+  +V+E
Sbjct: 22  RFISPEAKERYKQNVIHRNCIPERG----LENFLPDKIHSLGWEKFTEQPTAVSIPLVKE 81

Query: 95  FYANIDDQEEFQVIVRGCPLTGAQEPLILCSTSRTFRTQALMR-WWCTSSDQ---LNADV 154
           FY N ++ E F+V V    +          S +R + TQ +    +    D+   L+  +
Sbjct: 82  FYVNANEHENFKVFVWAFWIKFGS-----FSINRFYHTQDIPNDDYSRLRDEGVDLDEII 141

Query: 155 REVGIEGAQWRLSKTENAHF 170
           R +   GA+W+ S ++  HF
Sbjct: 142 RTIARLGAEWKRSASDVTHF 152

The following BLAST results are available for this feature:
BLAST of Lag0038667 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022845662.11.5e-0429.29uncharacterized protein LOC111368573 isoform X1 [Olea europaea var. sylvestris][more]
BLAST of Lag0038667 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0038667.1Lag0038667.1mRNA