Lag0037995.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAGCCAGAAAAAGCTTGTGAAGAAGACAAGAGTAATCAAAGTTGGCTCAGAGGAATTATGGGATTATTATGTTAAAAAGCTTTCAAACAAGGCTGCCCTGTGAGTCCCCCTCTTTACTTTTCATCTTCATGCTCTCAGTTCAATGTTTGGTAAATTAGTAATGTGGAAATGAAATGATATCCAAGGTACAAAGATTGAAATATTCATTTGCAATATTGCAGGTTGTAGTGCATTTTAGTGCTAGCTGGTGCACACCCTCAAGAGCCATGAACCCTTTCTTTGAAGAGCTGGCCTTGGTGTACAAAAGTGTTTTGTTTCTATCTGTGGATGTGGATGAAACTAAGGTAATTGTGATAATGTAAGCTTATGTGGATTATCTCTGAAATTTAACTTGATCTTAAAATTATTAACTTAGGCTCTAGTTTGAGTTTGTGTGGAGAAAATACAAAAAAGAATAAACCAAGTAAGAAACACAATTTTAGATCAATCTGAGCTCTTGATTGTCCTTTGTGTAATGATAAGTCACCTCAAGAGTTATGATATAATATAACATAACTTCAAAGATATTAAGAGTTTGTTTGATCCTGTTTTTTTTTTCCCTTTTCTTTTTGATTTTTTAAGAATATGTTAGATAACAATTTCTCCTCTCTTATTCTCTCCTTTGTTGCTAAAAATATTAACATGCATTTATGAATCATTTTTGTTTCTTATTCTCTAAAACTCTCCTCTCTCCCACTCTCTTTAAATTGAATCTCTCCCACTCTCTATAAAGTGAAGTATTCAGAATTTTTACATCGTTTTGCTTTTATGTTATTGTTTATGCAATCTGTGAACCACCGTGGATTAATGTGGCGTTCATTAGTGCTGATGAAAAATGTAAAATGATTAGGTCACCTACCTAATATCTTACCGTTTTTTAGGTAACTAAGTGTAGTATGGATGGTTGTCTCATAAAATTAGTCAAGAGTGCAAGAAATTAATAAGGTGTTTGAAACATACTATATTGGCACTAAGGACATGTTTGGGAGTGATTTTCGAACGGTCAAAATCACTATTGTAATGTCTAAAATCATTAAAAAAAGGCATGACAAAAGTACTTTTGACCATTCTAAAATCACTTCCAAATATACCGTAAGAATCTTTGATGTCAAATGTTGTATGATCAAATAGTTGTCTTATATACATGCAATTTTGGGAAAAAAACAGAATGAAAGAAGTTTGTACTTTTCTTTTGTTGTGATCCAAAGTTCTTATCATATGATAAACAGGAAGTTGCATCCAAGTTGGAGATAAAGGCCATGCCCACATTTGTATTGATGAAGAATGGAGCCCCAAACTATATGGTTGTTGGAGCCAACCCAGTTGAGCTGAAGAAAAGGATCAAGGCCTTTATATATGGCTAA ATGGACAGCCAGAAAAAGCTTGTGAAGAAGACAAGAGTAATCAAAGTTGGCTCAGAGGAATTATGGGATTATTATGTTAAAAAGCTTTCAAACAAGGCTGCCCTTGCTAGCTGGTGCACACCCTCAAGAGCCATGAACCCTTTCTTTGAAGAGCTGGCCTTGGTGTACAAAAGTGTTTTGTTTCTATCTGTGGATGTGGATGAAACTAAGGAAGTTGCATCCAAGTTGGAGATAAAGGCCATGCCCACATTTGTATTGATGAAGAATGGAGCCCCAAACTATATGGTTGTTGGAGCCAACCCAGTTGAGCTGAAGAAAAGGATCAAGGCCTTTATATATGGCTAA ATGGACAGCCAGAAAAAGCTTGTGAAGAAGACAAGAGTAATCAAAGTTGGCTCAGAGGAATTATGGGATTATTATGTTAAAAAGCTTTCAAACAAGGCTGCCCTTGCTAGCTGGTGCACACCCTCAAGAGCCATGAACCCTTTCTTTGAAGAGCTGGCCTTGGTGTACAAAAGTGTTTTGTTTCTATCTGTGGATGTGGATGAAACTAAGGAAGTTGCATCCAAGTTGGAGATAAAGGCCATGCCCACATTTGTATTGATGAAGAATGGAGCCCCAAACTATATGGTTGTTGGAGCCAACCCAGTTGAGCTGAAGAAAAGGATCAAGGCCTTTATATATGGCTAA MDSQKKLVKKTRVIKVGSEELWDYYVKKLSNKAALASWCTPSRAMNPFFEELALVYKSVLFLSVDVDETKEVASKLEIKAMPTFVLMKNGAPNYMVVGANPVELKKRIKAFIYG Homology
BLAST of Lag0037995.1 vs. NCBI nr
Match: XP_038899306.1 (thioredoxin-like protein CXXS1 [Benincasa hispida]) HSP 1 Score: 176.0 bits (445), Expect = 1.8e-40 Identity = 92/120 (76.67%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of Lag0037995.1 vs. NCBI nr
Match: XP_023535143.1 (thioredoxin-like protein CXXS1 [Cucurbita pepo subsp. pepo] >XP_023535144.1 thioredoxin-like protein CXXS1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 175.3 bits (443), Expect = 3.1e-40 Identity = 91/120 (75.83%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Lag0037995.1 vs. NCBI nr
Match: XP_022976606.1 (thioredoxin-like protein CXXS1 [Cucurbita maxima] >XP_022976607.1 thioredoxin-like protein CXXS1 [Cucurbita maxima]) HSP 1 Score: 173.3 bits (438), Expect = 1.2e-39 Identity = 91/120 (75.83%), Postives = 96/120 (80.00%), Query Frame = 0
BLAST of Lag0037995.1 vs. NCBI nr
Match: KAG6592016.1 (Kinesin-like protein KIN-14N, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172.9 bits (437), Expect = 1.5e-39 Identity = 90/120 (75.00%), Postives = 96/120 (80.00%), Query Frame = 0
BLAST of Lag0037995.1 vs. NCBI nr
Match: XP_008454556.1 (PREDICTED: thioredoxin-like protein CXXS1 [Cucumis melo] >KAA0046459.1 thioredoxin-like protein CXXS1 [Cucumis melo var. makuwa] >TYJ97753.1 thioredoxin-like protein CXXS1 [Cucumis melo var. makuwa]) HSP 1 Score: 172.6 bits (436), Expect = 2.0e-39 Identity = 92/119 (77.31%), Postives = 100/119 (84.03%), Query Frame = 0
BLAST of Lag0037995.1 vs. ExPASy Swiss-Prot
Match: Q8LDI5 (Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana OX=3702 GN=CXXS1 PE=2 SV=2) HSP 1 Score: 113.2 bits (282), Expect = 1.9e-24 Identity = 57/107 (53.27%), Postives = 72/107 (67.29%), Query Frame = 0
BLAST of Lag0037995.1 vs. ExPASy Swiss-Prot
Match: Q0J9V5 (Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0629500 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.1e-19 Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 0
BLAST of Lag0037995.1 vs. ExPASy Swiss-Prot
Match: Q9USR1 (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=txl1 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 7.5e-13 Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 0
BLAST of Lag0037995.1 vs. ExPASy Swiss-Prot
Match: Q851R5 (Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 9.8e-13 Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of Lag0037995.1 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-12 Identity = 42/92 (45.65%), Postives = 54/92 (58.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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