Lag0033723.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033723.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	temperature-induced lipocalin-1
Location	chr3: 1372982 .. 1374254 (+)
Sequence length	555
RNA-Seq Expression	Lag0033723.1
Synteny	Lag0033723.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGAAAGAGATGGAAGTGGTGAAAGGTTTGGAGCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCATCAAGAAATCAGCCAAAGAATGGTGTGAACACAAGGGCTAATTATGCACTCAAAGAAGATGGAACTGTGAATGTGGTGAATGAAACTTGGAGTGATGGAAAGAGAAGTTCTATAGAAGGTGTGGCTTTCAAGGCTGAGCCTTCGAGCGAGGAGGCCAAGTTCAAGGTCAAATTCTATCTGCCACCTTTTCTTCCAATCATTCCAGTTGTTGGGAATTACTGGGTTTTGTATATTGATGATGATTATCAGTATGTCCTGATTGGAGAACCTTCAAGGAAGAATCTTTGGGTATGTTTTCAGAATCCTTCTCCTGTTTCTCACTTTCTCACAGCAAATTTTCATATTCTGGGCTTGTGTTTTTCTTGTTTGTTAGACTTAAGGGTTGTTCCAATTTAACTTCATGATTTAAGAGTATCATATTTCAAAATATTTTTTGTTGTTATAAGATATGTTTTCTATGAAAGTGGTTGAGAAGGATTGTGCATTTGGGAAGTTATGTTCCAAGGATGATGGTTTTTTCTTTTCTGAGGCGAGTTCTATTAAAGGGATAGCTTCTTAAAAAGTGGTCTAATCCCAGTTTTGTTTATCAAAAACCTTAAACCTTGAAACCAAGTTCTTCAAACTTGTTTCTTCCTTTATCCAAAACCCCCATTACTAGAGATTTGAGATTGGTTACGAGTGTTTATAGAACAAGCCTAATTTTATAAGTATTCATTTTTTATTTCTACATGGAACATTTTTATTTCAAAGAGAGACATCTTGGTGCTGGGTTTAACACTTTTTTTTCCTTTTTGGTGGCTAGGTTTAAACTTCTTTTAATTGAATTTTAACTATTTTCTTGATAAATGTTGAATGGTCTATGGATTACTTTTATAATTTGACTTGAAGAAAAAGAAAGGGTAATCTTAGCACTTAAGGAAGTTTGACTTTAAATTTAAAAATAGCTCTGCGAGATTAAAACAATTTCCCCCATATATTGTATTAAGAATCTGTGGTGTATTGGCAGATCTTGTGCAGAGATACTCATCTTAACGAGGAGATATATAATCAGCTGCTTGAAAAAGCTAAGGACGAGGGTTATGATGTAAGCAAACTGCACAAGACACCACAGAGCGATCCTCCACCAGAAGATGAAGGCCCCAAAGATACCAAAGGCATATGGTGGATAAAGTCTCTTCTGGGAAAATAA

mRNA sequence

ATGGCGAAGAAAGAGATGGAAGTGGTGAAAGGTTTGGAGCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCATCAAGAAATCAGCCAAAGAATGGTGTGAACACAAGGGCTAATTATGCACTCAAAGAAGATGGAACTGTGAATGTGGTGAATGAAACTTGGAGTGATGGAAAGAGAAGTTCTATAGAAGGTGTGGCTTTCAAGGCTGAGCCTTCGAGCGAGGAGGCCAAGTTCAAGGTCAAATTCTATCTGCCACCTTTTCTTCCAATCATTCCAGTTGTTGGGAATTACTGGGTTTTGTATATTGATGATGATTATCAGTATGTCCTGATTGGAGAACCTTCAAGGAAGAATCTTTGGATCTTGTGCAGAGATACTCATCTTAACGAGGAGATATATAATCAGCTGCTTGAAAAAGCTAAGGACGAGGGTTATGATGTAAGCAAACTGCACAAGACACCACAGAGCGATCCTCCACCAGAAGATGAAGGCCCCAAAGATACCAAAGGCATATGGTGGATAAAGTCTCTTCTGGGAAAATAA

Coding sequence (CDS)

ATGGCGAAGAAAGAGATGGAAGTGGTGAAAGGTTTGGAGCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCATCAAGAAATCAGCCAAAGAATGGTGTGAACACAAGGGCTAATTATGCACTCAAAGAAGATGGAACTGTGAATGTGGTGAATGAAACTTGGAGTGATGGAAAGAGAAGTTCTATAGAAGGTGTGGCTTTCAAGGCTGAGCCTTCGAGCGAGGAGGCCAAGTTCAAGGTCAAATTCTATCTGCCACCTTTTCTTCCAATCATTCCAGTTGTTGGGAATTACTGGGTTTTGTATATTGATGATGATTATCAGTATGTCCTGATTGGAGAACCTTCAAGGAAGAATCTTTGGATCTTGTGCAGAGATACTCATCTTAACGAGGAGATATATAATCAGCTGCTTGAAAAAGCTAAGGACGAGGGTTATGATGTAAGCAAACTGCACAAGACACCACAGAGCGATCCTCCACCAGAAGATGAAGGCCCCAAAGATACCAAAGGCATATGGTGGATAAAGTCTCTTCTGGGAAAATAA

Protein sequence

MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSDGKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSRKNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKSLLGK

Homology

[Close]

BLAST of Lag0033723.1 vs. NCBI nr
Match: KAG7035667.1 (Two-component response regulator ORR23 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98
Identity = 176/184 (95.65%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
           MAKKEMEVVKGL+LEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD
Sbjct: 761 MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 820

Query: 61  GKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR 120
           GKRSSIEGVA+KA+PSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYID DYQYVLIGEPSR
Sbjct: 821 GKRSSIEGVAYKADPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLIGEPSR 880

Query: 121 KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKS 180
           KNLWILCR+THLNEEIYNQLL+KAK+EGYDVSKLHKT QSDPPPEDEGPKDTKGIWWIKS
Sbjct: 881 KNLWILCRNTHLNEEIYNQLLDKAKEEGYDVSKLHKTSQSDPPPEDEGPKDTKGIWWIKS 940

Query: 181 LLGK 185
           LLGK
Sbjct: 941 LLGK 944

[Close]

BLAST of Lag0033723.1 vs. NCBI nr
Match: XP_023005977.1 (temperature-induced lipocalin-1 [Cucurbita maxima] >XP_023529982.1 temperature-induced lipocalin-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98
Identity = 175/184 (95.11%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
           MAKKEMEVVKGL+LEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD
Sbjct: 1   MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60

Query: 61  GKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR 120
           GKRSSIEGVA+KA+PSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYID DYQYVL+GEPSR
Sbjct: 61  GKRSSIEGVAYKADPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120

Query: 121 KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKS 180
           KNLWILCR+THLNEEIYNQLL+KAK+EGYDVSKLHKT QSDPPPEDEGPKDTKGIWWIKS
Sbjct: 121 KNLWILCRNTHLNEEIYNQLLDKAKEEGYDVSKLHKTSQSDPPPEDEGPKDTKGIWWIKS 180

Query: 181 LLGK 185
           LLGK
Sbjct: 181 LLGK 184

[Close]

BLAST of Lag0033723.1 vs. NCBI nr
Match: KAG6587839.1 (Two-component response regulator ORR23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 369.0 bits (946), Expect = 2.4e-98
Identity = 175/184 (95.11%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
           MAKKEMEVVKGL+LEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD
Sbjct: 722 MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 781

Query: 61  GKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR 120
           GKRSSIEGVA+KA+PSSEEAKFKV+FYLPPFLPIIPVVGNYWVLYID DYQYVLIGEPSR
Sbjct: 782 GKRSSIEGVAYKADPSSEEAKFKVRFYLPPFLPIIPVVGNYWVLYIDGDYQYVLIGEPSR 841

Query: 121 KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKS 180
           KNLWILCR+THLNEEIYNQLL+KAK+EGYDVSKLHKT QSDPPPEDEGPKDTKGIWWIKS
Sbjct: 842 KNLWILCRNTHLNEEIYNQLLDKAKEEGYDVSKLHKTSQSDPPPEDEGPKDTKGIWWIKS 901

Query: 181 LLGK 185
           LLGK
Sbjct: 902 LLGK 905

[Close]

BLAST of Lag0033723.1 vs. NCBI nr
Match: XP_022932699.1 (temperature-induced lipocalin-1-like [Cucurbita moschata])

HSP 1 Score: 365.5 bits (937), Expect = 2.6e-97
Identity = 173/184 (94.02%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
           MAK EMEVVKGL+LEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD
Sbjct: 1   MAKTEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60

Query: 61  GKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR 120
           GKRSSIEGVA+KA+PSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYID DYQYVL+GEPSR
Sbjct: 61  GKRSSIEGVAYKADPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120

Query: 121 KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKS 180
           KNLWILCR+ HLNEEIYNQLL+KAK+EGYDVSKLHKT QSDPPPEDEGPKDTKGIWWIKS
Sbjct: 121 KNLWILCRNAHLNEEIYNQLLDKAKEEGYDVSKLHKTSQSDPPPEDEGPKDTKGIWWIKS 180

Query: 181 LLGK 185
           LLGK
Sbjct: 181 LLGK 184

[Close]

BLAST of Lag0033723.1 vs. NCBI nr
Match: XP_022921840.1 (temperature-induced lipocalin-1-like [Cucurbita moschata])

HSP 1 Score: 357.8 bits (917), Expect = 5.5e-95
Identity = 172/185 (92.97%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MAKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD 60
           MAKKEMEVVKGL+LEKYMGRWYEIASIPSRNQPKNGVNTRA YALKEDGTV VVNETWSD
Sbjct: 1   MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYALKEDGTVKVVNETWSD 60

Query: 61  GKRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR 120
           GKRSSIEGVAFKAEPSS+EAKFKVKFYLPPFLPIIPVVGNYWVLYID DYQYVL+GEPSR
Sbjct: 61  GKRSSIEGVAFKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDGDYQYVLVGEPSR 120

Query: 121 KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPEDEGPKDTKGIWWIKS 180
           KNLWILCR+THLNEEIYN+LLEKAK+ GYDV+KLHKTPQSDPPPE EGPKDTKGIWWIKS
Sbjct: 121 KNLWILCRNTHLNEEIYNELLEKAKELGYDVNKLHKTPQSDPPPEGEGPKDTKGIWWIKS 180

Query: 181 -LLGK 185
            LLGK
Sbjct: 181 ILLGK 185

[Close]

BLAST of Lag0033723.1 vs. ExPASy Swiss-Prot
Match: Q9FGT8 (Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.9e-74
Identity = 130/183 (71.04%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 3   KKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSDGK 62
           KKEMEVVKGL +E+YMGRWYEIAS PSR QPKNGV+TRA Y L  DGT++V+NETWS+GK
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 63  RSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSRKN 122
           R  IEG A+KA+P S+EAK KVKFY+PPFLPIIPV G+YWVLYID DYQ+ LIG+PSR  
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 123 LWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPPPE-DEGPKDTKGIWWIKSL 182
           LWIL R   + EE Y QL+EKA +EGYD+SKLHKTPQSD PPE +  P+D+KG+WW KSL
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKSL 183

Query: 183 LGK 185
            GK
Sbjct: 184 FGK 186

[Close]

BLAST of Lag0033723.1 vs. ExPASy Swiss-Prot
Match: Q5URA7 (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R877 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.0e-16
Identity = 53/155 (34.19%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 2   AKKEMEVVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSDG 61
           +K+++     L++++YMG WYEIA +P+  Q K  VN+ ANY L E   + V N    +G
Sbjct: 18  SKRDVVSQSSLDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEING 77

Query: 62  KRSSIEGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVG--NYWVLYIDDDYQYVLIGEPS 121
           + +S+ G A  A       +    F  P  L +    G   Y V++ID++YQY ++    
Sbjct: 78  RINSVTGTAIPA----ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV-SGG 137

Query: 122 RKNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKL 155
              LWIL R  ++N+  YNQL+    ++GYDV+ L
Sbjct: 138 NDTLWILSRFKNINQSTYNQLVTIVYNQGYDVNNL 166

[Close]

BLAST of Lag0033723.1 vs. ExPASy Swiss-Prot
Match: P0A902 (Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-14
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 8   VVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD--GKRSS 67
           VV   + ++Y+G WYEIA    R + +      A Y+L++DG +NV+N+ ++   G    
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 89

Query: 68  IEGVA-FKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSRKNLW 127
            EG A F   P+   A  KV F+ P +       G Y V+ +D +Y++ L+  P R  LW
Sbjct: 90  SEGKAYFTGAPT--RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLW 149

Query: 128 ILCRDTHLNEEIYNQLLEKAKDEGYDVSK 154
           IL R   +++E+  ++L  A  EG+DVSK
Sbjct: 150 ILSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]

BLAST of Lag0033723.1 vs. ExPASy Swiss-Prot
Match: P0A901 (Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-14
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 8   VVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVNETWSD--GKRSS 67
           VV   + ++Y+G WYEIA    R + +      A Y+L++DG +NV+N+ ++   G    
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 89

Query: 68  IEGVA-FKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSRKNLW 127
            EG A F   P+   A  KV F+ P +       G Y V+ +D +Y++ L+  P R  LW
Sbjct: 90  SEGKAYFTGAPT--RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLW 149

Query: 128 ILCRDTHLNEEIYNQLLEKAKDEGYDVSK 154
           IL R   +++E+  ++L  A  EG+DVSK
Sbjct: 150 ILSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]

BLAST of Lag0033723.1 vs. ExPASy Swiss-Prot
Match: P51909 (Apolipoprotein D OS=Cavia porcellus OX=10141 GN=APOD PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.4e-13
Identity = 58/164 (35.37%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 8   VVKGLELEKYMGRWYEIASIPSRNQPKNGVNTRANYALKEDGTVNVVN-ETWSDGKRSSI 67
           V +  +L KY+GRWYEI  IP   +  N +  +ANY+LKE+G V V+N E   DG  + I
Sbjct: 33  VQENFDLNKYLGRWYEIEKIPVSFEKGNCI--QANYSLKENGRVKVLNQELRPDGTVNQI 92

Query: 68  EGVAFKAEPSSEEAKFKVKFYLPPFLPIIPVVGNYWVLYIDDDYQYVLIGEPSR------ 127
           EG A  +   +E AK  VKF+    +P  P    YWVL  D D  Y L+   +       
Sbjct: 93  EGEATHSN-ITEPAKLGVKFF--QLMPSAP----YWVLATDYD-NYALVYSCTNIIWLFH 152

Query: 128 -KNLWILCRDTHLNEEIYNQLLEKAKDEGYDVSKLHKTPQSDPP 164
             ++WIL R+ +L +E    L +       D+ K+  T Q++ P
Sbjct: 153 VDHIWILGRNRYLPQETVTYLKDILTSNNIDIEKMTLTDQANCP 186

The following BLAST results are available for this feature:

BLAST of Lag0033723.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035667.1	1.1e-98	95.65	Two-component response regulator ORR23 [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023005977.1	1.4e-98	95.11	temperature-induced lipocalin-1 [Cucurbita maxima] >XP_023529982.1 temperature-i...	[more]
KAG6587839.1	2.4e-98	95.11	Two-component response regulator ORR23, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022932699.1	2.6e-97	94.02	temperature-induced lipocalin-1-like [Cucurbita moschata]	[more]
XP_022921840.1	5.5e-95	92.97	temperature-induced lipocalin-1-like [Cucurbita moschata]	[more]

BLAST of Lag0033723.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGT8	1.9e-74	71.04	Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1	[more]
Q5URA7	4.0e-16	34.19	Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R8...	[more]
P0A902	2.9e-14	34.23	Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 ...	[more]
P0A901	2.9e-14	34.23	Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc ...	[more]
P51909	5.4e-13	35.37	Apolipoprotein D OS=Cavia porcellus OX=10141 GN=APOD PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002446	Lipocalin, bacterial	PRINTS	PR01171	BCTLIPOCALIN	coord: 12..26 score: 48.46 coord: 49..58 score: 37.47 coord: 121..132 score: 40.66 coord: 148..158 score: 38.66
IPR000566	Lipocalin/cytosolic fatty-acid binding domain	PFAM	PF08212	Lipocalin_2	coord: 12..159 e-value: 1.7E-49 score: 167.5
IPR012674	Calycin	GENE3D	2.40.128.20		coord: 1..163 e-value: 7.1E-48 score: 164.6
IPR012674	Calycin	SUPERFAMILY	50814	Lipocalins	coord: 5..165
IPR022271	Lipocalin, ApoD type	PIRSF	PIRSF036893	Lipocalin_ApoD	coord: 1..170 e-value: 6.8E-52 score: 173.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..173
None	No IPR available	PANTHER	PTHR10612:SF44	TEMPERATURE-INDUCED LIPOCALIN-1-LIKE	coord: 1..184
None	No IPR available	PANTHER	PTHR10612	APOLIPOPROTEIN D	coord: 1..184
None	No IPR available	CDD	cd19438	lipocalin_Blc-like	coord: 9..157 e-value: 5.16798E-61 score: 184.303
IPR022272	Lipocalin family conserved site	PROSITE	PS00213	LIPOCALIN	coord: 11..24

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0033723	Lag0033723	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0033723.1.exon1	Lag0033723.1.exon1	exon
Lag0033723.1.exon2	Lag0033723.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0033723.1	cds.Lag0033723.1	CDS
cds.Lag0033723.1	cds.Lag0033723.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0033723.1	Lag0033723.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0000302	response to reactive oxygen species
cellular_component	GO:0005737	cytoplasm