Lag0032098.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAAAGGAATCATATTCGTTCAAGAGCTTGAAGACTACAATTACGACGGTGATGAAGGCGAAATCGGCAGTGAATTGAAGGTGTGGGGGATTGTAGTACAGGGAAAACGCGTTGATCGTGGTGCGCCGGTTTGTTACCTGTTGACGACAAGTAGTACGGCAGAGCTAGGGTTGTGGTGCTTGCACTTCTGTCTGGTAGGGTTAAGAATTTCAGAGAGACGACGGGAGGGAGGGAGGGACCTCCCTCCTTCGATTCTCGCTAGAAAATTGAAGGAGAGAGGATTTTCCGGCAAGCTTTTTTTTAAAAAAAAAGAATGATGTGAAAATGAGAAAAAGAAGAAAAGATTAGGGAAGAAGGAAGAAAAAAAAGTCGTCGTCAGTGAGCGGTGGACGCCGGCGACCTACTGAAGAAGAAAGGAAGAAGAAAAGGTTGAAGATGAGAAGAAAATAAGGAGAAGGTTGAAGAAGAAGAAGAATAAGAGAGAGAAATAGAAAAAATAAACAATAATAATAAAATAATAATATTTTATTACTTCAATATTTTTTATTTTAAAAAAAATTATTAAAATAATAGTGCCACATCAGCAACTGTTAAGATTTAATAGAAAAATTGATGGCAAGGACCAAAATGCTTCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAACTGTCACTCAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCAATAATCATTAAATACAATGCTTCGGGACATAAATCCCAACAATCATGACTTCAGACAAAATCCCAAAAACCAAGTCCATGAGAAATAGATCAAAAGGTGTTGAAGGGTGTGTTTGGGCCCTCATTTTTTGAAGCCCAGGTTTTCGAAAAAAGGAAGTTGGTGTTTGGGCCTCAGGTTTGGGAAAACACCTGTTTAGGGTTTCCCAAACCCTCGCTTTTGTTGCCCTACACGCCGCTCTCTGATGCCCCTCTTTCGGTAACACGCTTCCTCTCTCTCTCTGGTTTCCTTCGCTTGTCTGCTTTTTTCTCTCAACCGAAGCTTTGTATGCTGATTTTTTGCTTCGTTCTTCACATATTCTTGCTCTCTCTCCTTCTCTTCTACTTTGGGTTGTCGGATCTGAAGGTGGAGGTGAGTTTTTTCCTTATTTTTGTGATCTGTTTTCTACTTGAAAGCGTTAAACGCGACTGAGATTTGTGTTCTTCCTTCATCTTTTCTTCGGATCTGAACTTCCTACTCTGGTTCCGTGATGTCTTGGGGTCTTGGATCGAATGCATGTGTTCTTCGGTTTCAGAGGGACGTTTGGAACAGATCTTTGATCTTATCTCAGATTTGTCTTCGCCTCGCTCCGTCTTCATCAATCTCAGGTAGAACTTTTTTTCTTTGCGTCCCTTGTTTTTTATTTAAGACTCTCGGATCTAACCTTCTCTGATCTAACCTTCGGTTTTTTTTTTCTTTTTTACAGAACTCACTTCAGCTTGTCGTTGGTGTTGGTGATAGCAATCAGGATCCGCATGGTAGATTGGAGCACGGTGAGGGGTGGGACGAAGGTAAGGGGTAACCAGCCGATGATGCTCGTGAAAATTAAATAAGCAACCTTTCCCATTTTTTTTCTACTTTTGGGAAGTAAATTTCTCTAATTCTTTCTTCCTCTATTTTTTTTTTTTAGTTTTCTATCTTTCTTACGATTTTGATCTGTCTTCTTCTTCTATTTTTCTCATGCTCTAATTTACCGTTTCTGAATTTCTTTTTGTATACCTTTTTTTTCTATCTTCGTTACGATTGTGGTTGTTCTTTTTGTCTTCCTCATGTTCTGACCTTACCGTTTCCTATGGATTATGTGCTTTTTTTTCGCACATACGCATTGATAAGTTATTTTGAGTTCATGTTTCCTCTCATGACCCCCCTTCGTTTAGTTCATACTGTCTGTTGCTTGTCATGCCCCCCGCTTTGTATTATGTGTTGTTCATGCAAGGATTAAAGCCCTAGCGTAACAGAAACAATCAGACCATTAACTCAGAATTTAATTTGGATTAAAATACCATACGTTGGCAATACAATCACAACAGTAAAATCAAAATTAAACTACTGAATAGGTTATAATACACATGCTGATAATAAAACAAAAAACCTTAGATCTAATCTACAAGAAGATCTGAATGATCTAAGGTTAAGTGTAACTTACTACCGTGGATGATCTTGACAGAATTTAGCCAAATTCCCTTGATTTTTCACCAAAACCAGCCGCAAAACTGCTTCTTTACTTGTTGGAAAAATCTCACGAACACCACCAAAAAGGTTGCACTGGTATCCTCTTGAAGGATATTGCGTTGGGCTAG ATGCCGAAAGGAATCATATTCGTTCAAGAGCTTGAAGACTACAATTACGACGGTGATGAAGGCGAAATCGGCAGTGAATTGAAGGTGTGGGGGATTGTAGTACAGGGAAAACGCGTTGATCGTGGTGCGCCGGTTTGTTACCTGTTGACGACAAGTAGTACGGCAGAGCTAGGGTTGTGGTGCTTGCACTTCTGTCTGGTTTGGGAAAACACCTGTTTAGGGTTTCCCAAACCCTCGCTTTTGTTGCCCTACACGCCGCTCTCTGATGCCCCTCTTTCGAACTCACTTCAGCTTGTCGTTGGTGTTGGTGATAGCAATCAGGATCCGCATGGTAGATTGGAGCACGGTGAGGGGTGGGACGAAGCCGCAAAACTGCTTCTTTACTTGTTGGAAAAATCTCACGAACACCACCAAAAAGGTTGCACTGGTATCCTCTTGAAGGATATTGCGTTGGGCTAG ATGCCGAAAGGAATCATATTCGTTCAAGAGCTTGAAGACTACAATTACGACGGTGATGAAGGCGAAATCGGCAGTGAATTGAAGGTGTGGGGGATTGTAGTACAGGGAAAACGCGTTGATCGTGGTGCGCCGGTTTGTTACCTGTTGACGACAAGTAGTACGGCAGAGCTAGGGTTGTGGTGCTTGCACTTCTGTCTGGTTTGGGAAAACACCTGTTTAGGGTTTCCCAAACCCTCGCTTTTGTTGCCCTACACGCCGCTCTCTGATGCCCCTCTTTCGAACTCACTTCAGCTTGTCGTTGGTGTTGGTGATAGCAATCAGGATCCGCATGGTAGATTGGAGCACGGTGAGGGGTGGGACGAAGCCGCAAAACTGCTTCTTTACTTGTTGGAAAAATCTCACGAACACCACCAAAAAGGTTGCACTGGTATCCTCTTGAAGGATATTGCGTTGGGCTAG MPKGIIFVQELEDYNYDGDEGEIGSELKVWGIVVQGKRVDRGAPVCYLLTTSSTAELGLWCLHFCLVWENTCLGFPKPSLLLPYTPLSDAPLSNSLQLVVGVGDSNQDPHGRLEHGEGWDEAAKLLLYLLEKSHEHHQKGCTGILLKDIALG Homology
BLAST of Lag0032098.1 vs. NCBI nr
Match: XP_022133523.1 (uncharacterized protein LOC111006084 [Momordica charantia]) HSP 1 Score: 98.2 bits (243), Expect = 6.4e-17 Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of Lag0032098.1 vs. NCBI nr
Match: XP_038884231.1 (uncharacterized protein LOC120075128 [Benincasa hispida]) HSP 1 Score: 97.8 bits (242), Expect = 8.4e-17 Identity = 47/66 (71.21%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of Lag0032098.1 vs. NCBI nr
Match: XP_011656439.1 (uncharacterized protein LOC105435745 [Cucumis sativus] >KGN45836.1 hypothetical protein Csa_005561 [Cucumis sativus]) HSP 1 Score: 95.9 bits (237), Expect = 3.2e-16 Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of Lag0032098.1 vs. NCBI nr
Match: XP_008456777.1 (PREDICTED: uncharacterized protein LOC103496620 [Cucumis melo] >KAA0052003.1 uncharacterized protein E6C27_scaffold60G004890 [Cucumis melo var. makuwa] >TYK04556.1 uncharacterized protein E5676_scaffold409G001870 [Cucumis melo var. makuwa]) HSP 1 Score: 89.7 bits (221), Expect = 2.3e-14 Identity = 44/73 (60.27%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of Lag0032098.1 vs. NCBI nr
Match: XP_022990776.1 (uncharacterized protein LOC111487559 [Cucurbita maxima]) HSP 1 Score: 89.4 bits (220), Expect = 3.0e-14 Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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