Lag0031247.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGACGAGGAGGATCCATGGTTAGCTCCGGACAAGCTCTACCACTTTCTTCTCTGTTTCACTCTCACTATCTTCTTCGCTGGATTGGCCATTCACACGCGCTATCCATTCATCCGCCGCCACTCCATTCTCATCGGATCCGTCCTTTCTCTTTTCGCCGGAGCCGCCAAAGAGGTCGCCGACGAGCTCGGCTTCTTCAAGTCCGCCGGCGCCTCTGCCAGGGACGCCGTCGCCGATCTGATCGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCCCTCAGATTCTCGATCCGTAGCGGCGGCGACAAAGAAGCTAGCCCTAATCGGGACATTTCAATGGTCTGA ATGGGCGACGAGGAGGATCCATGGTTAGCTCCGGACAAGCTCTACCACTTTCTTCTCTGTTTCACTCTCACTATCTTCTTCGCTGGATTGGCCATTCACACGCGCTATCCATTCATCCGCCGCCACTCCATTCTCATCGGATCCGTCCTTTCTCTTTTCGCCGGAGCCGCCAAAGAGGTCGCCGACGAGCTCGGCTTCTTCAAGTCCGCCGGCGCCTCTGCCAGGGACGCCGTCGCCGATCTGATCGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCCCTCAGATTCTCGATCCGTAGCGGCGGCGACAAAGAAGCTAGCCCTAATCGGGACATTTCAATGGTCTGA ATGGGCGACGAGGAGGATCCATGGTTAGCTCCGGACAAGCTCTACCACTTTCTTCTCTGTTTCACTCTCACTATCTTCTTCGCTGGATTGGCCATTCACACGCGCTATCCATTCATCCGCCGCCACTCCATTCTCATCGGATCCGTCCTTTCTCTTTTCGCCGGAGCCGCCAAAGAGGTCGCCGACGAGCTCGGCTTCTTCAAGTCCGCCGGCGCCTCTGCCAGGGACGCCGTCGCCGATCTGATCGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCCCTCAGATTCTCGATCCGTAGCGGCGGCGACAAAGAAGCTAGCCCTAATCGGGACATTTCAATGGTCTGA MGDEEDPWLAPDKLYHFLLCFTLTIFFAGLAIHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASARDAVADLIGVLIASFLLHALRFSIRSGGDKEASPNRDISMV Homology
BLAST of Lag0031247.1 vs. NCBI nr
Match: XP_038890690.1 (uncharacterized protein LOC120080188 [Benincasa hispida]) HSP 1 Score: 207.2 bits (526), Expect = 7.4e-50 Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of Lag0031247.1 vs. NCBI nr
Match: XP_022948457.1 (uncharacterized protein LOC111452136 [Cucurbita moschata] >XP_022948458.1 uncharacterized protein LOC111452136 [Cucurbita moschata] >XP_023524714.1 uncharacterized protein LOC111788574 [Cucurbita pepo subsp. pepo] >XP_023524715.1 uncharacterized protein LOC111788574 [Cucurbita pepo subsp. pepo] >XP_023524717.1 uncharacterized protein LOC111788574 [Cucurbita pepo subsp. pepo] >XP_023524718.1 uncharacterized protein LOC111788574 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.8 bits (517), Expect = 8.2e-49 Identity = 101/115 (87.83%), Postives = 105/115 (91.30%), Query Frame = 0
BLAST of Lag0031247.1 vs. NCBI nr
Match: KAG7036537.1 (hypothetical protein SDJN02_00156, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 203.8 bits (517), Expect = 8.2e-49 Identity = 101/115 (87.83%), Postives = 105/115 (91.30%), Query Frame = 0
BLAST of Lag0031247.1 vs. NCBI nr
Match: KAG6606831.1 (hypothetical protein SDJN03_00173, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 201.8 bits (512), Expect = 3.1e-48 Identity = 100/114 (87.72%), Postives = 104/114 (91.23%), Query Frame = 0
BLAST of Lag0031247.1 vs. NCBI nr
Match: XP_022997696.1 (uncharacterized protein LOC111492582 [Cucurbita maxima] >XP_022997697.1 uncharacterized protein LOC111492582 [Cucurbita maxima]) HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47 Identity = 100/115 (86.96%), Postives = 104/115 (90.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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