Lag0029820.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0029820.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr8: 42403395 .. 42404117 (-)
Sequence length	723
RNA-Seq Expression	Lag0029820.1
Synteny	Lag0029820.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCACTTTCTCCGGCAACTCCATCTTCTTCTCATCTACCTTCATTTCACCATAATCTTCTTTGCCTTCTGTACTTCAATGGCGCCAATGGAGCACAATTCAGACGTTCTGGACCTCGTTGACGACGACGACGACGCTCTATCTTTCCGCGATTTTCCGATTCACGAACCAGAATCGGAGGCCGGCGATGATGATCGGCTGTGTCGCTCCCCGTCGTACCACGATTTGTTCGAGTTTCGCACCGATTTGAGGCAGAAAACAAGTTCGTCACCTGGTGAAATTGTCTTCTGCGGGAAGATTTTGGACGCGGTAATGCTCCGAGATGAAGATTCCGCTTCGCGAGGGCAAAATTTCCGAAGTAGCTCGGAGTCGTTTATGCGAAACCAGAGCTTTCGGTGCGGCGGTGCGTCGAAATCGTTTTCATCGCCTGCAGTCGGTGGTTTTGGATGTCAACGAAGTAATTCGAGGAGGCCTATGGCGTTGATAGGATTAGTGAAAACTCCGTCGAGAATGGAATTGAGCGAGATACGGAAGAGACAGGCTCGGTTGGCACCAGCGCCGATGTTCCACGTGGTTCCGGGAGAGGAGCCGGTAACTGTTGCCGCCGAGCGCACCGGCGGCGGAATCAGTCCGTGGAGTCTGATTAAGCCTCTCAGATACAGGTCCGTTCTGGTTAGAGTGTTGGCTAAGGCGGCTTCGAGTTGTATAACTCACGTGTGA

mRNA sequence

ATGCATCACTTTCTCCGGCAACTCCATCTTCTTCTCATCTACCTTCATTTCACCATAATCTTCTTTGCCTTCTGTACTTCAATGGCGCCAATGGAGCACAATTCAGACGTTCTGGACCTCGTTGACGACGACGACGACGCTCTATCTTTCCGCGATTTTCCGATTCACGAACCAGAATCGGAGGCCGGCGATGATGATCGGCTGTGTCGCTCCCCGTCGTACCACGATTTGTTCGAGTTTCGCACCGATTTGAGGCAGAAAACAAGTTCGTCACCTGGTGAAATTGTCTTCTGCGGGAAGATTTTGGACGCGGTAATGCTCCGAGATGAAGATTCCGCTTCGCGAGGGCAAAATTTCCGAAGTAGCTCGGAGTCGTTTATGCGAAACCAGAGCTTTCGGTGCGGCGGTGCGTCGAAATCGTTTTCATCGCCTGCAGTCGGTGGTTTTGGATGTCAACGAAGTAATTCGAGGAGGCCTATGGCGTTGATAGGATTAGTGAAAACTCCGTCGAGAATGGAATTGAGCGAGATACGGAAGAGACAGGCTCGGTTGGCACCAGCGCCGATGTTCCACGTGGTTCCGGGAGAGGAGCCGGTAACTGTTGCCGCCGAGCGCACCGGCGGCGGAATCAGTCCGTGGAGTCTGATTAAGCCTCTCAGATACAGGTCCGTTCTGGTTAGAGTGTTGGCTAAGGCGGCTTCGAGTTGTATAACTCACGTGTGA

Coding sequence (CDS)

ATGCATCACTTTCTCCGGCAACTCCATCTTCTTCTCATCTACCTTCATTTCACCATAATCTTCTTTGCCTTCTGTACTTCAATGGCGCCAATGGAGCACAATTCAGACGTTCTGGACCTCGTTGACGACGACGACGACGCTCTATCTTTCCGCGATTTTCCGATTCACGAACCAGAATCGGAGGCCGGCGATGATGATCGGCTGTGTCGCTCCCCGTCGTACCACGATTTGTTCGAGTTTCGCACCGATTTGAGGCAGAAAACAAGTTCGTCACCTGGTGAAATTGTCTTCTGCGGGAAGATTTTGGACGCGGTAATGCTCCGAGATGAAGATTCCGCTTCGCGAGGGCAAAATTTCCGAAGTAGCTCGGAGTCGTTTATGCGAAACCAGAGCTTTCGGTGCGGCGGTGCGTCGAAATCGTTTTCATCGCCTGCAGTCGGTGGTTTTGGATGTCAACGAAGTAATTCGAGGAGGCCTATGGCGTTGATAGGATTAGTGAAAACTCCGTCGAGAATGGAATTGAGCGAGATACGGAAGAGACAGGCTCGGTTGGCACCAGCGCCGATGTTCCACGTGGTTCCGGGAGAGGAGCCGGTAACTGTTGCCGCCGAGCGCACCGGCGGCGGAATCAGTCCGTGGAGTCTGATTAAGCCTCTCAGATACAGGTCCGTTCTGGTTAGAGTGTTGGCTAAGGCGGCTTCGAGTTGTATAACTCACGTGTGA

Protein sequence

MHHFLRQLHLLLIYLHFTIIFFAFCTSMAPMEHNSDVLDLVDDDDDALSFRDFPIHEPESEAGDDDRLCRSPSYHDLFEFRTDLRQKTSSSPGEIVFCGKILDAVMLRDEDSASRGQNFRSSSESFMRNQSFRCGGASKSFSSPAVGGFGCQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEEPVTVAAERTGGGISPWSLIKPLRYRSVLVRVLAKAASSCITHV

Homology

[Close]

BLAST of Lag0029820.1 vs. NCBI nr
Match: KAG6602329.1 (hypothetical protein SDJN03_07562, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 277.7 bits (709), Expect = 9.4e-71
Identity = 153/214 (71.50%), Postives = 173/214 (80.84%), Query Frame = 0


Query: 28  MAPMEHNSDVLDLVDDDDDALSFRDFPIHEPESEAGDDDRLCRSPSYHDLFEFRTDLRQK 87
           MA +E+N +VLDL+DDD D LS RDFPIHE +    D D  CRSPSYHDLFEF TDL+Q+
Sbjct: 1   MASVENNLEVLDLIDDDADDLSLRDFPIHEQD----DVDPPCRSPSYHDLFEFCTDLKQR 60

Query: 88  TSSS--PGEIVFCGKILDA--VMLRDEDSASRGQNFRSSSESFMRNQSFRCGGASKSFSS 147
           TSSS  P EIVFCGKILDA  + LRD+DS + G++FRS+SE FMRNQSFR    SKSFSS
Sbjct: 61  TSSSSPPSEIVFCGKILDAGSLSLRDKDSDAEGRSFRSNSELFMRNQSFR----SKSFSS 120

Query: 148 PAVGGFGCQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEEPVTVAA 207
           P +G FG QRS+ RRPMALIGL +TPSR ELSEIR+RQARLAPAPMF VVPGE   TVAA
Sbjct: 121 PVIGSFGYQRSSLRRPMALIGLTRTPSRTELSEIRRRQARLAPAPMFRVVPGEAAATVAA 180

Query: 208 ERTGGGISPWSLIKPLRYRSVLVRVLAKAASSCI 238
           + TGG +SPWSLI+ LRYRSVLVR LAKAASSCI
Sbjct: 181 DGTGGEMSPWSLIRALRYRSVLVRALAKAASSCI 206

[Close]

BLAST of Lag0029820.1 vs. NCBI nr
Match: KAA0040631.1 (hypothetical protein E6C27_scaffold262G002160 [Cucumis melo var. makuwa] >TYK05678.1 hypothetical protein E5676_scaffold98G001490 [Cucumis melo var. makuwa])

HSP 1 Score: 241.9 bits (616), Expect = 5.7e-60
Identity = 147/221 (66.52%), Postives = 166/221 (75.11%), Query Frame = 0


Query: 28  MAPMEHNSDVLDLVD---DDDDALSFRDFPIHEPESEAGDDDRLCRSPSYHDLFEFRTDL 87
           M  ++++ DVL LVD   DD+D LSFRDFPIHEP+SEA  DD         D FEF TDL
Sbjct: 1   MESVKYDPDVLVLVDVDQDDEDTLSFRDFPIHEPQSEA--DDSCSDHDDRQDFFEFSTDL 60

Query: 88  RQKTSS--SPGEIVFCGKILDAVMLRDEDSASRGQNFRSSSESFM-RNQSFRCGGASKSF 147
           R+KTSS   P EIVFCG+ILDA   RDE+SA    N R+ SES + RNQSFR G  S+SF
Sbjct: 61  RRKTSSLLPPSEIVFCGRILDA--FRDEESA----NSRNRSESLLVRNQSFRYGNGSRSF 120

Query: 148 SSPAVGG-FGCQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEEPVT 207
           SS AVGG F  QRSNSRRPM LIGL KTPSRME+SEIRKRQARLAPAPMFHVVP E  VT
Sbjct: 121 SSSAVGGLFENQRSNSRRPMTLIGLTKTPSRMEMSEIRKRQARLAPAPMFHVVPKERRVT 180

Query: 208 -VAAERTGGGISPWSLIKPLRYRSVLVRVLAKAASSCITHV 241
            VAA+    GISPW LI+P+RYRSV+VRVLAKAAS+C+T V
Sbjct: 181 VVAADGYDSGISPWRLIRPMRYRSVVVRVLAKAASTCMTIV 213

[Close]

BLAST of Lag0029820.1 vs. NCBI nr
Match: KAE8648518.1 (hypothetical protein Csa_008278 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 4.1e-58
Identity = 143/224 (63.84%), Postives = 165/224 (73.66%), Query Frame = 0


Query: 28  MAPMEHNSDVLDLVD--DDDDALSFRDFPIHEPESEAGD-----DDRLCRSPSYHDLFEF 87
           M  +++N D+LD++D  DD+D LSFRDFPI EP+SEAGD     DDR        D FEF
Sbjct: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDR-------QDFFEF 60

Query: 88  RTDLRQKTSS--SPGEIVFCGKILDAVMLRDEDSASRGQNFRSSSESFMRNQSFRCGGAS 147
           RTDL++KTSS   P EIVFCG+ LD  + RDEDSAS   +   S  S +RNQSFR G  S
Sbjct: 61  RTDLKRKTSSLLPPSEIVFCGRTLD--IFRDEDSAS---SRNRSESSLIRNQSFRYGNGS 120

Query: 148 KSFSSPAVGG-FGCQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEE 207
           + FSS AVGG F  QRSNSRRPMALIGL KTPSR+ELSEIRKRQARLAP PMFHVVP E 
Sbjct: 121 RPFSSSAVGGLFEIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKET 180

Query: 208 PVT-VAAERTGGGISPWSLIKPLRYRSVLVRVLAKAASSCITHV 241
            V+ V A+    GISPW LIKPLRYRSV+VRVLAKAAS+C++ V
Sbjct: 181 TVSVVTADGYESGISPWRLIKPLRYRSVVVRVLAKAASTCMSLV 212

[Close]

BLAST of Lag0029820.1 vs. NCBI nr
Match: KAB1219648.1 (hypothetical protein CJ030_MR3G011092 [Morella rubra])

HSP 1 Score: 126.3 bits (316), Expect = 3.5e-25
Identity = 84/210 (40.00%), Postives = 118/210 (56.19%), Query Frame = 0


Query: 39  DLVDDDDDALSFRDFPIHEPESEAGD--DDRLCRSPSYHDLFEFRTDLRQKTSSSPGEIV 98
           +L + ++DALS  D PIHE E+E GD    +   SPS  D FEF T    + S +   I+
Sbjct: 10  ELEEPEEDALSLCDLPIHEKENE-GDPFPPKYQSSPSRQDFFEFSTHPNLEMSPALDSII 69

Query: 99  FCGKIL--DAVMLRDEDSASRGQNFRSS--------SESFMRNQSFRCGGASKSFSSPAV 158
           FCG+++    + L +  +  R ++F  +        +E+ +R+ SFR  G  KS  +PA 
Sbjct: 70  FCGRVMHKKELPLNESQNKWRSESFNKAQIFHSAKLTEASIRSHSFRVKG-PKSVPAPAT 129

Query: 159 GGFGCQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEEPVTVAAERT 218
           G F    S S++   LIGL K    MELSEIRKRQ R  P PMF  V  EEPV ++ +R+
Sbjct: 130 GSFRYSSSGSKKHKVLIGLAKIQPEMELSEIRKRQGRRPPVPMFPPVGTEEPV-ISGDRS 189

Query: 219 GGGISPWSLIKPLRYRSVLVRVLAKAASSC 237
           GGG S W L++P R RS L   LA+++  C
Sbjct: 190 GGGKSLWRLLRPFRCRSHLTNTLARSSFGC 216

[Close]

BLAST of Lag0029820.1 vs. NCBI nr
Match: KAE7996926.1 (hypothetical protein FH972_001603 [Carpinus fangiana])

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-19
Identity = 79/203 (38.92%), Postives = 109/203 (53.69%), Query Frame = 0


Query: 31  MEHNSDVLDLVDDDDDALSFRDFPIHEPESEAGDDDRLCRSPSYHDLFEFRTDLRQKTSS 90
           ME    +L L + ++DALS  D PIH+ + E    +    SP+  DLFEF T+ + +T+ 
Sbjct: 1   MEDKPQLLYLEEAEEDALSLCDLPIHDQDPEPSYQN----SPARLDLFEFSTNAKPETNP 60

Query: 91  SPGEIVFCGKILDAVMLRDEDSASRGQNFRSSSESFMRNQSFRCG-----GASKSFSSPA 150
           S   I+FCG++     +   D    G   +  SESF   Q+F          S SF +PA
Sbjct: 61  STDRILFCGRV-----IHRRDPLPGGVQPKRRSESFNNFQTFHSARLTSPSRSSSFRAPA 120

Query: 151 VGGFGCQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEEPVTVAAER 210
            G +  Q S SR+   LIGL K    M+LSEIRKRQ+R  PAP+  V   +EPV V+   
Sbjct: 121 TGSYRYQSSGSRKHKVLIGLTKI-QPMDLSEIRKRQSRRTPAPIVPV--PDEPVIVS--- 180

Query: 211 TGGGISPWSLIKPLRYRSVLVRV 229
             GG S W L++PLR +S L R+
Sbjct: 181 --GGRSHWGLLRPLRCKSHLARL 186

[Close]

BLAST of Lag0029820.1 vs. ExPASy TrEMBL
Match: A0A5A7TG51 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001490 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.8e-60
Identity = 147/221 (66.52%), Postives = 166/221 (75.11%), Query Frame = 0


Query: 28  MAPMEHNSDVLDLVD---DDDDALSFRDFPIHEPESEAGDDDRLCRSPSYHDLFEFRTDL 87
           M  ++++ DVL LVD   DD+D LSFRDFPIHEP+SEA  DD         D FEF TDL
Sbjct: 1   MESVKYDPDVLVLVDVDQDDEDTLSFRDFPIHEPQSEA--DDSCSDHDDRQDFFEFSTDL 60

Query: 88  RQKTSS--SPGEIVFCGKILDAVMLRDEDSASRGQNFRSSSESFM-RNQSFRCGGASKSF 147
           R+KTSS   P EIVFCG+ILDA   RDE+SA    N R+ SES + RNQSFR G  S+SF
Sbjct: 61  RRKTSSLLPPSEIVFCGRILDA--FRDEESA----NSRNRSESLLVRNQSFRYGNGSRSF 120

Query: 148 SSPAVGG-FGCQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEEPVT 207
           SS AVGG F  QRSNSRRPM LIGL KTPSRME+SEIRKRQARLAPAPMFHVVP E  VT
Sbjct: 121 SSSAVGGLFENQRSNSRRPMTLIGLTKTPSRMEMSEIRKRQARLAPAPMFHVVPKERRVT 180

Query: 208 -VAAERTGGGISPWSLIKPLRYRSVLVRVLAKAASSCITHV 241
            VAA+    GISPW LI+P+RYRSV+VRVLAKAAS+C+T V
Sbjct: 181 VVAADGYDSGISPWRLIRPMRYRSVVVRVLAKAASTCMTIV 213

[Close]

BLAST of Lag0029820.1 vs. ExPASy TrEMBL
Match: A0A0A0KNN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G494420 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 2.0e-58
Identity = 143/224 (63.84%), Postives = 165/224 (73.66%), Query Frame = 0


Query: 28  MAPMEHNSDVLDLVD--DDDDALSFRDFPIHEPESEAGD-----DDRLCRSPSYHDLFEF 87
           M  +++N D+LD++D  DD+D LSFRDFPI EP+SEAGD     DDR        D FEF
Sbjct: 1   MESVKYNPDLLDVLDVQDDEDTLSFRDFPILEPQSEAGDSCSDHDDR-------QDFFEF 60

Query: 88  RTDLRQKTSS--SPGEIVFCGKILDAVMLRDEDSASRGQNFRSSSESFMRNQSFRCGGAS 147
           RTDL++KTSS   P EIVFCG+ LD  + RDEDSAS   +   S  S +RNQSFR G  S
Sbjct: 61  RTDLKRKTSSLLPPSEIVFCGRTLD--IFRDEDSAS---SRNRSESSLIRNQSFRYGNGS 120

Query: 148 KSFSSPAVGG-FGCQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEE 207
           + FSS AVGG F  QRSNSRRPMALIGL KTPSR+ELSEIRKRQARLAP PMFHVVP E 
Sbjct: 121 RPFSSSAVGGLFEIQRSNSRRPMALIGLTKTPSRIELSEIRKRQARLAPTPMFHVVPKET 180

Query: 208 PVT-VAAERTGGGISPWSLIKPLRYRSVLVRVLAKAASSCITHV 241
            V+ V A+    GISPW LIKPLRYRSV+VRVLAKAAS+C++ V
Sbjct: 181 TVSVVTADGYESGISPWRLIKPLRYRSVVVRVLAKAASTCMSLV 212

[Close]

BLAST of Lag0029820.1 vs. ExPASy TrEMBL
Match: A0A6A1W7H3 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G011092 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-25
Identity = 84/210 (40.00%), Postives = 118/210 (56.19%), Query Frame = 0


Query: 39  DLVDDDDDALSFRDFPIHEPESEAGD--DDRLCRSPSYHDLFEFRTDLRQKTSSSPGEIV 98
           +L + ++DALS  D PIHE E+E GD    +   SPS  D FEF T    + S +   I+
Sbjct: 10  ELEEPEEDALSLCDLPIHEKENE-GDPFPPKYQSSPSRQDFFEFSTHPNLEMSPALDSII 69

Query: 99  FCGKIL--DAVMLRDEDSASRGQNFRSS--------SESFMRNQSFRCGGASKSFSSPAV 158
           FCG+++    + L +  +  R ++F  +        +E+ +R+ SFR  G  KS  +PA 
Sbjct: 70  FCGRVMHKKELPLNESQNKWRSESFNKAQIFHSAKLTEASIRSHSFRVKG-PKSVPAPAT 129

Query: 159 GGFGCQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEEPVTVAAERT 218
           G F    S S++   LIGL K    MELSEIRKRQ R  P PMF  V  EEPV ++ +R+
Sbjct: 130 GSFRYSSSGSKKHKVLIGLAKIQPEMELSEIRKRQGRRPPVPMFPPVGTEEPV-ISGDRS 189

Query: 219 GGGISPWSLIKPLRYRSVLVRVLAKAASSC 237
           GGG S W L++P R RS L   LA+++  C
Sbjct: 190 GGGKSLWRLLRPFRCRSHLTNTLARSSFGC 216

[Close]

BLAST of Lag0029820.1 vs. ExPASy TrEMBL
Match: A0A2N9EIE3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6598 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-21
Identity = 81/217 (37.33%), Postives = 115/217 (53.00%), Query Frame = 0


Query: 31  MEHNSDVLDLVDDDDDALSFRDFPIHEPESEAGDDDRLCRSPSYHDLFEFRTDLRQKTSS 90
           ME N  + DL + ++D LS  D  I + E ++        SPS+ D+FEF  +    T+ 
Sbjct: 1   MEDNKYLQDLEESEEDTLSLCDLLIDDQEPDSYSPKYFPNSPSHPDMFEFSKNPINPTNP 60

Query: 91  SPGEIVFCGKILDAVMLRDEDSASRGQNFRSSSESFMRNQSF---RCGGASKSFS----- 150
               ++FCG+++       +D + R   F S SESF ++Q F   R  G ++S S     
Sbjct: 61  K-DTMIFCGRVIH--QKNQQDQSHRQALFLSRSESFNKSQKFHSARFTGNARSNSLRVPT 120

Query: 151 -SPAVGGFG-CQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEEPVT 210
            +PA G      +S+S++   LIGL K    M+L+EIRKRQ R AP PMF VV G EPV 
Sbjct: 121 PAPATGSSRYYHKSDSKKHKVLIGLAKIQPEMDLNEIRKRQGRRAPVPMFPVVDGGEPVV 180

Query: 211 VAAERTGG-GISPWSLIKPLRYRSVLVRVLAKAASSC 237
               ++GG G S W L++PLR R      LA+AA  C
Sbjct: 181 AGGGKSGGTGKSHWGLLRPLRCRGHATNALARAAFGC 214

[Close]

BLAST of Lag0029820.1 vs. ExPASy TrEMBL
Match: A0A5N6QCE8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_001603 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.2e-20
Identity = 79/203 (38.92%), Postives = 109/203 (53.69%), Query Frame = 0


Query: 31  MEHNSDVLDLVDDDDDALSFRDFPIHEPESEAGDDDRLCRSPSYHDLFEFRTDLRQKTSS 90
           ME    +L L + ++DALS  D PIH+ + E    +    SP+  DLFEF T+ + +T+ 
Sbjct: 1   MEDKPQLLYLEEAEEDALSLCDLPIHDQDPEPSYQN----SPARLDLFEFSTNAKPETNP 60

Query: 91  SPGEIVFCGKILDAVMLRDEDSASRGQNFRSSSESFMRNQSFRCG-----GASKSFSSPA 150
           S   I+FCG++     +   D    G   +  SESF   Q+F          S SF +PA
Sbjct: 61  STDRILFCGRV-----IHRRDPLPGGVQPKRRSESFNNFQTFHSARLTSPSRSSSFRAPA 120

Query: 151 VGGFGCQRSNSRRPMALIGLVKTPSRMELSEIRKRQARLAPAPMFHVVPGEEPVTVAAER 210
            G +  Q S SR+   LIGL K    M+LSEIRKRQ+R  PAP+  V   +EPV V+   
Sbjct: 121 TGSYRYQSSGSRKHKVLIGLTKI-QPMDLSEIRKRQSRRTPAPIVPV--PDEPVIVS--- 180

Query: 211 TGGGISPWSLIKPLRYRSVLVRV 229
             GG S W L++PLR +S L R+
Sbjct: 181 --GGRSHWGLLRPLRCKSHLARL 186

The following BLAST results are available for this feature:

BLAST of Lag0029820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602329.1	9.4e-71	71.50	hypothetical protein SDJN03_07562, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0040631.1	5.7e-60	66.52	hypothetical protein E6C27_scaffold262G002160 [Cucumis melo var. makuwa] >TYK056...	[more]
KAE8648518.1	4.1e-58	63.84	hypothetical protein Csa_008278 [Cucumis sativus]	[more]
KAB1219648.1	3.5e-25	40.00	hypothetical protein CJ030_MR3G011092 [Morella rubra]	[more]
KAE7996926.1	1.3e-19	38.92	hypothetical protein FH972_001603 [Carpinus fangiana]	[more]

BLAST of Lag0029820.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0029820.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TG51	2.8e-60	66.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KNN4	2.0e-58	63.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G494420 PE=4 SV=1	[more]
A0A6A1W7H3	1.7e-25	40.00	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G011092 PE=4 SV=1	[more]
A0A2N9EIE3	1.1e-21	37.33	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6598 PE=4 SV=1	[more]
A0A5N6QCE8	6.2e-20	38.92	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_001603 PE=4 SV=1	[more]

BLAST of Lag0029820.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34130:SF8	SUBFAMILY NOT NAMED	coord: 31..236
None	No IPR available	PANTHER	PTHR34130	FAMILY NOT NAMED	coord: 31..236

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0029820	Lag0029820	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0029820.1.exon1	Lag0029820.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0029820.1	cds.Lag0029820.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0029820.1	Lag0029820.1-protein	polypeptide