Lag0027688.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0027688.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Locationchr8: 3525040 .. 3525753 (-)
Sequence length714
RNA-Seq ExpressionLag0027688.1
SyntenyLag0027688.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGCCAGAAAGGGAGTCCAGTGGAAGGAGTCTCAAACCAAAGTGAAGACACTAGTGCCCAGCGATCTAAAGCCAGAACCGGCAGTGTGGCTTCACTTCATAAAAAATAGGTTGATGCCCACAACCCACGATAACACCATTTCAATAGAGAGGGTTATGCTTCTCTACAGAATCATGAAGGGGTTGGAGATCAATATAGGGAGCATCATCAGAGAGGAGATCCTTTCATGTGGAAGGAGGGAAGTTGGTCCTTGGGTTCCTATAACCCAACTATGTCAGAGGTTGAAAATTATTCCTGGAAAAGATGAGGTACGCCACTTTTTCATGCCCACTATCGACTTGCCTCTGATAGGGAAGCTTCAACAGAACAATGCTCAAAGAAAGGATAAGGCTTCCACTTCTCAGGCTACTCCACCTCCAGGGTTGACTCCTGCTTCACCTCCTCAGTACACTCCTGTTTCAGGGCCTACACCATCATCAGAGGCCCTTGCATTTGCCTTCCGACAACTGGACCGGATTGAGGACAAGCTGAAAACATACTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGAGAGTTCTATCTCTCTATCGCCCCAAGCATCGCTCCTGTTTTCCCTGACTTCCCTCAAGCTCTGCTACCTCAAGAAGAAAAAGAATATGAAGATGAAGATGAAGAAGATGAAGAGAATTCCTCGGATGAGGAATAG

mRNA sequence

ATGGTGGCCAGAAAGGGAGTCCAGTGGAAGGAGTCTCAAACCAAAGTGAAGACACTAGTGCCCAGCGATCTAAAGCCAGAACCGGCAGTGTGGCTTCACTTCATAAAAAATAGGTTGATGCCCACAACCCACGATAACACCATTTCAATAGAGAGGGTTATGCTTCTCTACAGAATCATGAAGGGGTTGGAGATCAATATAGGGAGCATCATCAGAGAGGAGATCCTTTCATGTGGAAGGAGGGAAGTTGGTCCTTGGGTTCCTATAACCCAACTATGTCAGAGGTTGAAAATTATTCCTGGAAAAGATGAGGTACGCCACTTTTTCATGCCCACTATCGACTTGCCTCTGATAGGGAAGCTTCAACAGAACAATGCTCAAAGAAAGGATAAGGCTTCCACTTCTCAGGCTACTCCACCTCCAGGGTTGACTCCTGCTTCACCTCCTCAGTACACTCCTGTTTCAGGGCCTACACCATCATCAGAGGCCCTTGCATTTGCCTTCCGACAACTGGACCGGATTGAGGACAAGCTGAAAACATACTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGAGAGTTCTATCTCTCTATCGCCCCAAGCATCGCTCCTGTTTTCCCTGACTTCCCTCAAGCTCTGCTACCTCAAGAAGAAAAAGAATATGAAGATGAAGATGAAGAAGATGAAGAGAATTCCTCGGATGAGGAATAG

Coding sequence (CDS)

ATGGTGGCCAGAAAGGGAGTCCAGTGGAAGGAGTCTCAAACCAAAGTGAAGACACTAGTGCCCAGCGATCTAAAGCCAGAACCGGCAGTGTGGCTTCACTTCATAAAAAATAGGTTGATGCCCACAACCCACGATAACACCATTTCAATAGAGAGGGTTATGCTTCTCTACAGAATCATGAAGGGGTTGGAGATCAATATAGGGAGCATCATCAGAGAGGAGATCCTTTCATGTGGAAGGAGGGAAGTTGGTCCTTGGGTTCCTATAACCCAACTATGTCAGAGGTTGAAAATTATTCCTGGAAAAGATGAGGTACGCCACTTTTTCATGCCCACTATCGACTTGCCTCTGATAGGGAAGCTTCAACAGAACAATGCTCAAAGAAAGGATAAGGCTTCCACTTCTCAGGCTACTCCACCTCCAGGGTTGACTCCTGCTTCACCTCCTCAGTACACTCCTGTTTCAGGGCCTACACCATCATCAGAGGCCCTTGCATTTGCCTTCCGACAACTGGACCGGATTGAGGACAAGCTGAAAACATACTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGAGAGTTCTATCTCTCTATCGCCCCAAGCATCGCTCCTGTTTTCCCTGACTTCCCTCAAGCTCTGCTACCTCAAGAAGAAAAAGAATATGAAGATGAAGATGAAGAAGATGAAGAGAATTCCTCGGATGAGGAATAG

Protein sequence

MVARKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMKGLEINIGSIIREEILSCGRREVGPWVPITQLCQRLKIIPGKDEVRHFFMPTIDLPLIGKLQQNNAQRKDKASTSQATPPPGLTPASPPQYTPVSGPTPSSEALAFAFRQLDRIEDKLKTYWVYAKERDEAIREFYLSIAPSIAPVFPDFPQALLPQEEKEYEDEDEEDEENSSDEE
Homology
BLAST of Lag0027688.1 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-17
Identity = 69/238 (28.99%), Postives = 115/238 (48.32%), Query Frame = 0

Query: 2   VARKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMK 61
           VA  G +W  S     T + S L P   VW HF+K+RL+PTTH   +S +R++LL+ ++ 
Sbjct: 78  VAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLN 137

Query: 62  GLEINIGSIIREEILSCGRREVGP-WVP--ITQLCQRLKIIPGKDEVRHFFMPTIDLPLI 121
           G  IN+G +I  EI +C  ++ G  + P  IT+LC+    +  ++++ +     ID   +
Sbjct: 138 GKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEKLHN--TGEIDAIAV 197

Query: 122 GKLQQNNAQRKDKASTSQATPPPGLTPASPPQYTPVSGPTPSSEALAFAFRQLDRIEDKL 181
            ++ Q       +  T     P    PA+              +AL     Q +    + 
Sbjct: 198 ARITQ-------EGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQ 257

Query: 182 KTYWVYAKERDEAIREFYLSIAPSIAPVFPDFPQALLPQEEKEYEDEDEEDEENSSDE 237
           + +W Y+KERD A+++   +      P FP FPQ +L   + EYE E ++D  N + E
Sbjct: 258 QQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQDLDYEYEAESDKDGSNEAAE 306

BLAST of Lag0027688.1 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-15
Identity = 72/242 (29.75%), Postives = 115/242 (47.52%), Query Frame = 0

Query: 2   VARKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMK 61
           VA  G +W  S     T + S L P   VW HF+K+RL+PTTH  T+S +R++LL+ ++ 
Sbjct: 148 VAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLI 207

Query: 62  GLEINIGSIIREEILSCGRREVGP-WVP--ITQLCQRLKIIPGKDEVRHFFMPTIDLPLI 121
           G  IN+G +I  EI +C  R+ G  + P  IT+LC+  +     +E +      ID   +
Sbjct: 208 GKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAV 267

Query: 122 GKLQQN--NAQRKDKASTSQATPPPGLTPASPPQYTPVSGPTPSSEALA--FAFRQLDRI 181
            ++ Q       +  +S+  AT     T     Q         S + +        L   
Sbjct: 268 ARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHT 327

Query: 182 EDKLKTYWVYAKERDEAIREFYLSIAPSIAPVFPDFPQALLPQEEKEYEDEDEEDEENSS 237
             + + +W Y+KERD A+++   +      P FP FPQ +L   + EYE E ++D  N +
Sbjct: 328 HKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQEILKDLDYEYEAESDKDGSNEA 387

BLAST of Lag0027688.1 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 89.7 bits (221), Expect = 3.6e-14
Identity = 68/220 (30.91%), Postives = 107/220 (48.64%), Query Frame = 0

Query: 24  LKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMKGLEINIGSIIREEILSCGRREV 83
           L P   VW HF+K+RL+PTTH  T+S +R++LLY ++ G  IN+G +I  EI +C  R+ 
Sbjct: 41  LTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKS 100

Query: 84  GP-WVP--ITQLCQRLKIIPGKDEVRHFFMPTIDLPLIGKL-QQNNAQRKDKASTSQATP 143
           G  + P  ITQLC+  +     +E +      ID   + ++ Q+   +   + STS+ T 
Sbjct: 101 GALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTV 160

Query: 144 PPGLTPASP--PQYTPVSGPTPSSEALAFAFRQ-LDRIEDKLKTYWVYAKERDEAIREFY 203
                       Q   +       E   +     L     + + +W Y+KERD A+++  
Sbjct: 161 ASSSRANGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKAL 220

Query: 204 LSIAPSIAPVFPDFPQALLPQEEKEYEDEDEEDEENSSDE 237
            +      P FP FPQ LL   + EYE E ++D  N + E
Sbjct: 221 QNNFTRPIPTFPTFPQELLQDLDYEYEAESDKDGSNEAAE 260

BLAST of Lag0027688.1 vs. NCBI nr
Match: KAE8695166.1 (hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus])

HSP 1 Score: 86.3 bits (212), Expect = 3.9e-13
Identity = 58/193 (30.05%), Postives = 100/193 (51.81%), Query Frame = 0

Query: 6   GVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMKGLEI 65
           G +W   Q K KT+    L P   +W HF+K++LMPT+H+ T+S +R++LL+ I+ G  I
Sbjct: 141 GTRWNGQQLKRKTVDRDRLLPHVKLWNHFMKHKLMPTSHNTTVSCQRMLLLHSILTGRTI 200

Query: 66  NIGSIIREEILSCGRREVGPWV---PITQLCQRLKIIPGKDEVRHFFMPTI------DLP 125
           +IG II E    C +R+    V    IT LC++ K+   ++E+    +  I       +P
Sbjct: 201 DIGKIIVEHAHLCLKRQASALVFPNLITALCRKKKV---REEMFDEILSGIAGLNKAKIP 260

Query: 126 LIGKLQQNNAQRKDKASTSQATPPPGLTPASPPQYTPVSGPTPSSEALAFAFRQLDRIED 185
           ++   ++    +K +A+TS+    P +  +S          T   +A+    + + ++ D
Sbjct: 261 MLLGYKEAKG-KKHEATTSRVASSPHVRASS----------TDLEQAVQRTHQHVGQLSD 319

Query: 186 KLKTYWVYAKERD 190
           KL  Y+ YAK RD
Sbjct: 321 KLMVYFAYAKRRD 319

BLAST of Lag0027688.1 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-12
Identity = 48/141 (34.04%), Postives = 77/141 (54.61%), Query Frame = 0

Query: 2   VARKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMK 61
           VA  G +W  S   V T + S L P   +W HF+K+RL+PTTH   +S ERV+LLY ++ 
Sbjct: 65  VAIAGAEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLT 124

Query: 62  GLEINIGSIIREEILSCGRREVGP-WVP--ITQLCQRLKIIPGKDEVRHFFMPTIDLPLI 121
           G  IN+G +I  EI +C  R+ G  + P  I ++C+  +     +E +      ID   +
Sbjct: 125 GKSINMGRMIHREICACAARKSGALFFPSLIIRMCRNARAPYLVNEEKLHNTGEIDAIAV 184

Query: 122 GKL-QQNNAQRKDKASTSQAT 139
            ++ Q+  A+   + S+S+ T
Sbjct: 185 ARIAQEGPAEPSHQPSSSRPT 205

BLAST of Lag0027688.1 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.8e-18
Identity = 69/238 (28.99%), Postives = 115/238 (48.32%), Query Frame = 0

Query: 2   VARKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMK 61
           VA  G +W  S     T + S L P   VW HF+K+RL+PTTH   +S +R++LL+ ++ 
Sbjct: 78  VAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLN 137

Query: 62  GLEINIGSIIREEILSCGRREVGP-WVP--ITQLCQRLKIIPGKDEVRHFFMPTIDLPLI 121
           G  IN+G +I  EI +C  ++ G  + P  IT+LC+    +  ++++ +     ID   +
Sbjct: 138 GKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEKLHN--TGEIDAIAV 197

Query: 122 GKLQQNNAQRKDKASTSQATPPPGLTPASPPQYTPVSGPTPSSEALAFAFRQLDRIEDKL 181
            ++ Q       +  T     P    PA+              +AL     Q +    + 
Sbjct: 198 ARITQ-------EGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQ 257

Query: 182 KTYWVYAKERDEAIREFYLSIAPSIAPVFPDFPQALLPQEEKEYEDEDEEDEENSSDE 237
           + +W Y+KERD A+++   +      P FP FPQ +L   + EYE E ++D  N + E
Sbjct: 258 QQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQDLDYEYEAESDKDGSNEAAE 306

BLAST of Lag0027688.1 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.0e-16
Identity = 72/242 (29.75%), Postives = 115/242 (47.52%), Query Frame = 0

Query: 2   VARKGVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMK 61
           VA  G +W  S     T + S L P   VW HF+K+RL+PTTH  T+S +R++LL+ ++ 
Sbjct: 148 VAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLI 207

Query: 62  GLEINIGSIIREEILSCGRREVGP-WVP--ITQLCQRLKIIPGKDEVRHFFMPTIDLPLI 121
           G  IN+G +I  EI +C  R+ G  + P  IT+LC+  +     +E +      ID   +
Sbjct: 208 GKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAV 267

Query: 122 GKLQQN--NAQRKDKASTSQATPPPGLTPASPPQYTPVSGPTPSSEALA--FAFRQLDRI 181
            ++ Q       +  +S+  AT     T     Q         S + +        L   
Sbjct: 268 ARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHT 327

Query: 182 EDKLKTYWVYAKERDEAIREFYLSIAPSIAPVFPDFPQALLPQEEKEYEDEDEEDEENSS 237
             + + +W Y+KERD A+++   +      P FP FPQ +L   + EYE E ++D  N +
Sbjct: 328 HKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQEILKDLDYEYEAESDKDGSNEA 387

BLAST of Lag0027688.1 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 68/220 (30.91%), Postives = 107/220 (48.64%), Query Frame = 0

Query: 24  LKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMKGLEINIGSIIREEILSCGRREV 83
           L P   VW HF+K+RL+PTTH  T+S +R++LLY ++ G  IN+G +I  EI +C  R+ 
Sbjct: 41  LTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKS 100

Query: 84  GP-WVP--ITQLCQRLKIIPGKDEVRHFFMPTIDLPLIGKL-QQNNAQRKDKASTSQATP 143
           G  + P  ITQLC+  +     +E +      ID   + ++ Q+   +   + STS+ T 
Sbjct: 101 GALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTV 160

Query: 144 PPGLTPASP--PQYTPVSGPTPSSEALAFAFRQ-LDRIEDKLKTYWVYAKERDEAIREFY 203
                       Q   +       E   +     L     + + +W Y+KERD A+++  
Sbjct: 161 ASSSRANGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKAL 220

Query: 204 LSIAPSIAPVFPDFPQALLPQEEKEYEDEDEEDEENSSDE 237
            +      P FP FPQ LL   + EYE E ++D  N + E
Sbjct: 221 QNNFTRPIPTFPTFPQELLQDLDYEYEAESDKDGSNEAAE 260

BLAST of Lag0027688.1 vs. ExPASy TrEMBL
Match: A0A6A2ZUE4 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110733pilonHSYRG00282 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-13
Identity = 58/193 (30.05%), Postives = 100/193 (51.81%), Query Frame = 0

Query: 6   GVQWKESQTKVKTLVPSDLKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMKGLEI 65
           G +W   Q K KT+    L P   +W HF+K++LMPT+H+ T+S +R++LL+ I+ G  I
Sbjct: 141 GTRWNGQQLKRKTVDRDRLLPHVKLWNHFMKHKLMPTSHNTTVSCQRMLLLHSILTGRTI 200

Query: 66  NIGSIIREEILSCGRREVGPWV---PITQLCQRLKIIPGKDEVRHFFMPTI------DLP 125
           +IG II E    C +R+    V    IT LC++ K+   ++E+    +  I       +P
Sbjct: 201 DIGKIIVEHAHLCLKRQASALVFPNLITALCRKKKV---REEMFDEILSGIAGLNKAKIP 260

Query: 126 LIGKLQQNNAQRKDKASTSQATPPPGLTPASPPQYTPVSGPTPSSEALAFAFRQLDRIED 185
           ++   ++    +K +A+TS+    P +  +S          T   +A+    + + ++ D
Sbjct: 261 MLLGYKEAKG-KKHEATTSRVASSPHVRASS----------TDLEQAVQRTHQHVGQLSD 319

Query: 186 KLKTYWVYAKERD 190
           KL  Y+ YAK RD
Sbjct: 321 KLMVYFAYAKRRD 319

BLAST of Lag0027688.1 vs. ExPASy TrEMBL
Match: W9RPD1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026905 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-12
Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 0

Query: 24  LKPEPAVWLHFIKNRLMPTTHDNTISIERVMLLYRIMKGLEINIGSIIREEILSC-GRRE 83
           L+P P +W HF++ RLMP++H   +  ER +LL+ +MKG  +N+G +I +++  C G R 
Sbjct: 8   LQPGPKIWYHFLRFRLMPSSHYRLVHKERAILLHCMMKGRPLNVGRMIHQQVGVCAGHRN 67

Query: 84  VGPWVP--ITQLCQRLKIIPGKDEVRHFFMPTIDLPLIGKLQQNNAQRKDKASTSQATPP 143
            G W P  ITQLC    +   K E +      I   ++ +L  ++AQ ++ A    A  P
Sbjct: 68  GGLWFPSLITQLCIAHGVSVEKHETKEPPSAAISTFVLARLLHDDAQEEEAAPAPAANAP 127

Query: 144 PGLTPASPPQYTPVSGPTPSSE-ALAFAFRQLDRIEDKLKTYWVYAKERDEAI 193
               P + P    +     S E  L+    Q      +++ +W Y K+RD A+
Sbjct: 128 HLGEPTAEPNSPDIVARLSSMEQRLSQVEVQQYESAQQMREFWKYTKQRDLAL 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON78020.12.0e-1728.99hypothetical protein PanWU01x14_023740 [Parasponia andersonii][more]
PON46472.11.4e-1529.75hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON59596.13.6e-1430.91hypothetical protein PanWU01x14_158080 [Parasponia andersonii][more]
KAE8695166.13.9e-1330.05hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus][more]
PON50458.13.3e-1234.04hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5DXM39.8e-1828.99Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... [more]
A0A2P5BCG47.0e-1629.75Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5CEY21.7e-1430.91Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... [more]
A0A6A2ZUE41.9e-1330.05Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110733pilon... [more]
W9RPD12.1e-1230.64Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026905 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..140

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0027688Lag0027688gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0027688.1.exon1Lag0027688.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0027688.1cds.Lag0027688.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0027688.1Lag0027688.1-proteinpolypeptide