Lag0026292.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAAAATATGGAATAACTTGTGGAAGATGAAAATCCCTAATAAGATCAAACTTTATTGCTGGAAAGCCCTCAAGAATTCTTTGCCTAACTATGTAAATTTAAATAACAGAGGTATCGATTTGCCAACTCATTGTCCTATTTGTAATCTTTATCCTGAAAGCACTTATCACTGTCTTTTTAGTTGCTATCGGGCTCAAGAACTGTGGAGGCTTACCTTTGATTGAGTTTTTCTGGAGGAGGATCTTCAAGGAAGTTTCATTGATAGATGGCTGAAGATAGACGCGCATTCCACGTTGAAGGAGCTCGAACTAGTCACGATCACCTGTTGGGCCATATGGAGTGATAGAAACAAAATTGTCCATGAGGAATCGATACCTCTGGCTAGCATCAAGAGCATTTGGATTAAAGAGTACCTGGAGTCGTTCTGGCGAGCAAATATTTGTTCAAACCCCAAAGGATCTGGAATTAATCAAGCAGTTTCTTCATCTTTGATTCTCCCTGCATGTTGGTCCTCTCCCCCGTGTGGCTTCTGGAAATTAAACTCTGATGCCGCATGCTCAATTTCTCCTCCAAAGGTTGGAATAGGCCCGATTTGTAGAAATGAAAATGGAGAAATAATGGTTGCCTCAGCTTCCTCTTTCGATGGTATCTCAGCAGCCCATATGATCGAATTAAAAGCAATATTGGAAGGGATGAGATTGGCACTGGAGTGA ATGAACAAAATATGGAATAACTTGTGGAAGATGAAAATCCCTAATAAGATCAAACTTTATTGCTGGAAAGCCCTCAAGAATTCTTTGCCTAACTATGAGGATCTTCAAGGAAGTTTCATTGATAGATGGCTGAAGATAGACGCGCATTCCACGTTGAAGGAGCTCGAACTAGTCACGATCACCTGTTGGGCCATATGGAGTGATAGAAACAAAATTGTCCATGAGGAATCGATACCTCTGGCTAGCATCAAGAGCATTTGGATTAAAGAGTACCTGGAGTCGTTCTGGCGAGCAAATATTTGTTCAAACCCCAAAGGATCTGGAATTAATCAAGCAGTTTCTTCATCTTTGATTCTCCCTGCATGTTGGTCCTCTCCCCCGTGTGGCTTCTGGAAATTAAACTCTGATGCCGCATGCTCAATTTCTCCTCCAAAGGTTGGAATAGGCCCGATTTGTAGAAATGAAAATGGAGAAATAATGGTTGCCTCAGCTTCCTCTTTCGATGGTATCTCAGCAGCCCATATGATCGAATTAAAAGCAATATTGGAAGGGATGAGATTGGCACTGGAGTGA ATGAACAAAATATGGAATAACTTGTGGAAGATGAAAATCCCTAATAAGATCAAACTTTATTGCTGGAAAGCCCTCAAGAATTCTTTGCCTAACTATGAGGATCTTCAAGGAAGTTTCATTGATAGATGGCTGAAGATAGACGCGCATTCCACGTTGAAGGAGCTCGAACTAGTCACGATCACCTGTTGGGCCATATGGAGTGATAGAAACAAAATTGTCCATGAGGAATCGATACCTCTGGCTAGCATCAAGAGCATTTGGATTAAAGAGTACCTGGAGTCGTTCTGGCGAGCAAATATTTGTTCAAACCCCAAAGGATCTGGAATTAATCAAGCAGTTTCTTCATCTTTGATTCTCCCTGCATGTTGGTCCTCTCCCCCGTGTGGCTTCTGGAAATTAAACTCTGATGCCGCATGCTCAATTTCTCCTCCAAAGGTTGGAATAGGCCCGATTTGTAGAAATGAAAATGGAGAAATAATGGTTGCCTCAGCTTCCTCTTTCGATGGTATCTCAGCAGCCCATATGATCGAATTAAAAGCAATATTGGAAGGGATGAGATTGGCACTGGAGTGA MNKIWNNLWKMKIPNKIKLYCWKALKNSLPNYEDLQGSFIDRWLKIDAHSTLKELELVTITCWAIWSDRNKIVHEESIPLASIKSIWIKEYLESFWRANICSNPKGSGINQAVSSSLILPACWSSPPCGFWKLNSDAACSISPPKVGIGPICRNENGEIMVASASSFDGISAAHMIELKAILEGMRLALE Homology
BLAST of Lag0026292.1 vs. NCBI nr
Match: XP_018821989.1 (uncharacterized protein LOC108992010 [Juglans regia] >KAF5454504.1 hypothetical protein F2P56_024162 [Juglans regia]) HSP 1 Score: 96.7 bits (239), Expect = 2.3e-16 Identity = 60/197 (30.46%), Postives = 99/197 (50.25%), Query Frame = 0
BLAST of Lag0026292.1 vs. NCBI nr
Match: XP_030495196.1 (uncharacterized protein LOC115710989 [Cannabis sativa]) HSP 1 Score: 96.7 bits (239), Expect = 2.3e-16 Identity = 61/237 (25.74%), Postives = 104/237 (43.88%), Query Frame = 0
BLAST of Lag0026292.1 vs. NCBI nr
Match: XP_030505962.1 (uncharacterized protein LOC115720894 [Cannabis sativa]) HSP 1 Score: 93.2 bits (230), Expect = 2.6e-15 Identity = 60/231 (25.97%), Postives = 95/231 (41.13%), Query Frame = 0
BLAST of Lag0026292.1 vs. NCBI nr
Match: XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa]) HSP 1 Score: 91.3 bits (225), Expect = 9.8e-15 Identity = 61/226 (26.99%), Postives = 90/226 (39.82%), Query Frame = 0
BLAST of Lag0026292.1 vs. NCBI nr
Match: XP_030936552.1 (uncharacterized protein LOC115961769 [Quercus lobata]) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-14 Identity = 61/235 (25.96%), Postives = 96/235 (40.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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