Lag0025118.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCATGGAATCAACCGCCTTCCTCCGCCGCGGAATCGCCCAAACACCGCCGCTCCCGGCGGCGGGACTTCCGTTGGGCTTCCGCCACAACGTGTCTTCGGTTCGGCTCTTCGTCGGAAAAGCAAATGCAAACAACAACCACCATGACTGCAACCGGTCCAGCGCTAATAATCGCAATCAAATACGGTGCTTCAGATATGACAGATCCCGGTCCGGTTCTCATGGCGGCGGCTTCCCTTCTCCAAACGCCAAATTGGCGTTGCAGTCGCTGTTGTGCTTCTCTAATTTGGATTCGGCCGCGGAGGCCGAAACCAGAGATATAAATGCTCAAAAGGTACTGACGACAACTCTTAGTTGGGAGTGTAAGTTTTATACCAGTTGAGCTATGACGTTGTATATTTCGTGTCGTGATTTTAGTTTGTGATTGGCAGAGAAAAGCGTTACAATCATTGTTAGCTCAGAAACCTACAGAGGCAGAGAAGATAATGATGGGAGTGTACAAGAATTACCAGAGACAGAAAGTCCCTGCCTCCACTAAATATGATGCTACCTTGGCTTTCGTCCAAATTCTCATCCACTTGGTATTTTCTCACACTTTAACATTTTTTTTTATACATTTTTTTTAGTACAATAAATATGTGAGATAGGAGGATTTGAATTTCAAAAGACCCACGAGCTAGGCTTAAAAGTATATCATGTTGCTACATTAGCTTAATACAAAAATAAATGAATGAAAACTTATATTTTATATGGCTTTATATTTTGTGACTTATTTGATTCTGAATTGTTATAAAAAAAAAGTTAGCCATATATATATTGATTAATTATAATAATATCATTAGATACTATACCTACACATTTGTTTTATCTATAAATCACTAACAAACCTATACCGTCAAAGCGAGTTTAGCTTAGCGGTAATTGACATGTACTTCCGACTAAAAGGTTAGATGTTTGAATATATTGTCATGTATTCTCGACCAAAAAAGACTAGTTGAATTTTTATTAATTTTTTCATATGAAATCAAATTCATTGATTTTTGCATTGTGTTGTAAGAATATCAATAGAGTATCACTAAATTGAATTTATAAGAAACATAACTTATTTAGAAGTATGAATTAATTGTTTATTTATTAATTTTTATAACTTATATGTTTTTCAAGAATATTAGTTAATGTGGATATAATATTGTTAATAAAATTGAGACATCAATATGAACATTTTTTTTAATTGTGTATTAATTTTAATTTTAATTTTAATACAGGGAACGCCTAAAAGCTTGGATGATGCTATTGGCTATCTGAACGACCTAGAAGAGATGCCCGACGCTCCAAGTGATGCAAAGCGTTTCCTTTATAGAGTAAGCTATTTCATTCTAACTTTATAATTTTTGTTTTGCTTTATTTTTATTTATTTTTATTTTTTATTTTTTACATTTTCATCTGGGTACTTTCGAAAAGTCTTTTTTTTTTCCCTATACTTTTAGCTTTTGTTCATTTTTTGATATAAGGTCAAAACGTTTAAAAAATTATCATATTAAATCCTTTGACATAAAGTTATGCCTATATTTTAAGAAATCTATTGTGTGACGTGTTTTGTAGAAAGATCAAAATAGACATTTCGAAAGTATATAGCTGAAAGTATAAAAACATTATGTGAATGTTTTGACTAAAATAAATAATAGCTAAAGATCCAAATAATATATATATTTTTTATTTTTTATATAAGTATATCTCTATTCAATAGCTCGATCAAAATATATGTATATATTTTAAATTGTTTCACCTCTCAGTGATGTTTTTTCTTTTAAGTAATGGGATTAATTGGGTGGGTTTCTAATTTAGGACGATCGAATTTATTTATAATTTCGATGAGGATAAGGGGGTATTTAACTAATACATTTTTTTTTTTTAAAAAACTTAGCTCGAGTAAAATTAGGTTAAATTATAAGTTTGGTTCTCGGTGAGAATAGTGTAGTAAATCTTGAAACTTTAATATATGTCTATTAGGTCTTTAAACTTTCAAGATTGTATTAG ATGATCATGGAATCAACCGCCTTCCTCCGCCGCGGAATCGCCCAAACACCGCCGCTCCCGGCGGCGGGACTTCCGTTGGGCTTCCGCCACAACGTGTCTTCGGTTCGGCTCTTCGTCGGAAAAGCAAATGCAAACAACAACCACCATGACTGCAACCGGTCCAGCGCTAATAATCGCAATCAAATACGGTGCTTCAGATATGACAGATCCCGGTCCGGTTCTCATGGCGGCGGCTTCCCTTCTCCAAACGCCAAATTGGCGTTGCAGTCGCTGTTGTGCTTCTCTAATTTGGATTCGGCCGCGGAGGCCGAAACCAGAGATATAAATGCTCAAAAGAGAAAAGCGTTACAATCATTGTTAGCTCAGAAACCTACAGAGGCAGAGAAGATAATGATGGGAGTGTACAAGAATTACCAGAGACAGAAAGTCCCTGCCTCCACTAAATATGATGCTACCTTGGCTTTCGTCCAAATTCTCATCCACTTGGGAACGCCTAAAAGCTTGGATGATGCTATTGGCTATCTGAACGACCTAGAAGAGATGCCCGACGCTCCAAGTGATGCAAAGCGTTTCCTTTATAGAGTCTTTAAACTTTCAAGATTGTATTAG ATGATCATGGAATCAACCGCCTTCCTCCGCCGCGGAATCGCCCAAACACCGCCGCTCCCGGCGGCGGGACTTCCGTTGGGCTTCCGCCACAACGTGTCTTCGGTTCGGCTCTTCGTCGGAAAAGCAAATGCAAACAACAACCACCATGACTGCAACCGGTCCAGCGCTAATAATCGCAATCAAATACGGTGCTTCAGATATGACAGATCCCGGTCCGGTTCTCATGGCGGCGGCTTCCCTTCTCCAAACGCCAAATTGGCGTTGCAGTCGCTGTTGTGCTTCTCTAATTTGGATTCGGCCGCGGAGGCCGAAACCAGAGATATAAATGCTCAAAAGAGAAAAGCGTTACAATCATTGTTAGCTCAGAAACCTACAGAGGCAGAGAAGATAATGATGGGAGTGTACAAGAATTACCAGAGACAGAAAGTCCCTGCCTCCACTAAATATGATGCTACCTTGGCTTTCGTCCAAATTCTCATCCACTTGGGAACGCCTAAAAGCTTGGATGATGCTATTGGCTATCTGAACGACCTAGAAGAGATGCCCGACGCTCCAAGTGATGCAAAGCGTTTCCTTTATAGAGTCTTTAAACTTTCAAGATTGTATTAG MIMESTAFLRRGIAQTPPLPAAGLPLGFRHNVSSVRLFVGKANANNNHHDCNRSSANNRNQIRCFRYDRSRSGSHGGGFPSPNAKLALQSLLCFSNLDSAAEAETRDINAQKRKALQSLLAQKPTEAEKIMMGVYKNYQRQKVPASTKYDATLAFVQILIHLGTPKSLDDAIGYLNDLEEMPDAPSDAKRFLYRVFKLSRLY Homology
BLAST of Lag0025118.1 vs. NCBI nr
Match: XP_038895250.1 (uncharacterized protein LOC120083532 [Benincasa hispida]) HSP 1 Score: 184.1 bits (466), Expect = 1.2e-42 Identity = 107/200 (53.50%), Postives = 136/200 (68.00%), Query Frame = 0
BLAST of Lag0025118.1 vs. NCBI nr
Match: XP_022994895.1 (uncharacterized protein LOC111490483 [Cucurbita maxima]) HSP 1 Score: 166.8 bits (421), Expect = 2.0e-37 Identity = 109/193 (56.48%), Postives = 124/193 (64.25%), Query Frame = 0
BLAST of Lag0025118.1 vs. NCBI nr
Match: XP_023542455.1 (uncharacterized protein LOC111802357 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 155.6 bits (392), Expect = 4.5e-34 Identity = 102/193 (52.85%), Postives = 122/193 (63.21%), Query Frame = 0
BLAST of Lag0025118.1 vs. NCBI nr
Match: XP_022955331.1 (uncharacterized protein LOC111457324 [Cucurbita moschata]) HSP 1 Score: 152.9 bits (385), Expect = 2.9e-33 Identity = 101/193 (52.33%), Postives = 121/193 (62.69%), Query Frame = 0
BLAST of Lag0025118.1 vs. NCBI nr
Match: KAG6573362.1 (hypothetical protein SDJN03_27249, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147.1 bits (370), Expect = 1.6e-31 Identity = 97/193 (50.26%), Postives = 119/193 (61.66%), Query Frame = 0
BLAST of Lag0025118.1 vs. ExPASy TrEMBL
Match: A0A6J1K2L3 (uncharacterized protein LOC111490483 OS=Cucurbita maxima OX=3661 GN=LOC111490483 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 9.5e-38 Identity = 109/193 (56.48%), Postives = 124/193 (64.25%), Query Frame = 0
BLAST of Lag0025118.1 vs. ExPASy TrEMBL
Match: A0A6J1GTH1 (uncharacterized protein LOC111457324 OS=Cucurbita moschata OX=3662 GN=LOC111457324 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.4e-33 Identity = 101/193 (52.33%), Postives = 121/193 (62.69%), Query Frame = 0
BLAST of Lag0025118.1 vs. ExPASy TrEMBL
Match: A0A6J1CHE7 (uncharacterized protein LOC111010906 OS=Momordica charantia OX=3673 GN=LOC111010906 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 3.9e-23 Identity = 97/211 (45.97%), Postives = 120/211 (56.87%), Query Frame = 0
BLAST of Lag0025118.1 vs. ExPASy TrEMBL
Match: A0A0A0LXK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G441330 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.8e-21 Identity = 85/206 (41.26%), Postives = 112/206 (54.37%), Query Frame = 0
BLAST of Lag0025118.1 vs. ExPASy TrEMBL
Match: A0A1S3BA19 (uncharacterized protein LOC103487676 OS=Cucumis melo OX=3656 GN=LOC103487676 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 4.4e-19 Identity = 91/212 (42.92%), Postives = 116/212 (54.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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