Lag0019798.1 (mRNA) Sponge gourd (AG‐4) v1

Overview


Name	Lag0019798.1
Type	mRNA
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
Location	chr5: 45603811 .. 45611882 (-)
Sequence length	2031
RNA-Seq Expression	Lag0019798.1
Synteny	Lag0019798.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCTACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTTTACCCAGCATTAGTCTATTTATCAACTTCCAAGATCAATCTGGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAGTTAATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGATTTTTCTGTTGCATTCCTTGGAATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCAGGATTGTTTCTTTCTTGGGGTTTCTCTTTGTTTTAGATAGTCTGTTTTTTTATAACTCGATAGAGTCTCTGATACAGACAAGGAAGGCCTCAGTTTCCCTCTTCTTTTCATTCGAGTAAGTTGTCAATTCCACCGTCTGGTATACATCTTGTTTTGTATTTGTACAAGCTTAAACTATGATGTTTAGGTAATTGGGTAATTGGTATTTATTGAACGTTTGGTACCATAATAATTTCAAGGCATTATTTGTTGTTAGAATGTCAGGTGTAACAAGTCCATGTTAGATGAACTCACACATTATTGTTTAAATTTGATTTTTAAGATCTTATATGGAGAATTTATGACTGGGAATACTGTTTTTTATTCCTTGCTTGCTAGAGTAAAGTTTTTAAACATCCTATGATGTTTGCTTCTGGTCCTCTGAGGCTTTTATGTCATCATTATATCATTAAATAAAGTCAATGACTTGCTTTTCAGGTATATGATTCTTGCGACAACAGCTGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTACTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGTAAGTAATCAAGCTACACCCCTAAAGCCTATCTCATTCCTGTCAACTGGAAGTTCAGAATGTGCTCATATTCCTAGTATCTTCTCATGCCAACTGCTTAATACACATAGTAAGAAGATAAGGAGGTCAAATAAAGCTCCAAGGAAAGTGTATAGTACAAATTTCTTGCATTCAATATTCTTTGCTGGTGTTTAATAGACGTTATAGGTTAAATTGCATGATTTTAGATCCTCCATTCTTCAATCTTCAGTCAGTGTATTTGCTCTTTATTAACATCATCCTCATTTCACATTGATTATGCTGAGTTTGCTCTTGTAGGACTTATGGCGTGCCTTTGCACTTGATCAGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACGCCTGAAGAACTCAATTCGTGCGTCGTAGCTTGATCAACTTATTATGTTTTTGATGCTTCCAATATTTATATTTCAGCTACTAAAATTCCTTTTATGGAATTGCAGAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCGAAGAAACTAGTATGTGGGCATCTTTTTCACGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCCGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCAACAAGGTAATTGTAAACAATTTAATTCAATTGACTGTTTGGCTAAAAGCTCCTAAATCTTGTGCGATTTTTAATTTGATAATTTTATTCAATCTCTTCAACCACCATAGATTGACCTAGCCCTCATTAAGGGCTTTAAAGGGAATGAGTATAAGTCATGGTGTCCACCTATCTAGGATTTAATGTCTTATGGGTTTCCTAGCAAATAGCAATTGAATGCAGTAAGGTTAGACCGTTGTCCCTTGAGACTAGTTGAGGTGCGTGCAAGCTGGTCTAGACACTCACGGATATCCAAAAAGTTATTAAACCTCTTTCATGTATATTTCATCCAAGGAAGAAAAGCACAGAAGTTCTGGAGGACATGATTATCTTCAAAGTATTAAAGCTAAAAGAATCTTGTTCGTTATTGCTTATGTTACATTTAGAAACCTAGAGACAGAATATCTGTCCCATCTGCCATGTCTCCCACAAAATTAGTTCGTAGTGTACAATTTTTTTTTTTTTTTTATAAAAAAAAAAAAATTGTGTAATGGTTTCCTACATCTCTAATTTTTTTTTTTTCTTTTTACAAGTGGTGCTTTGTATCCAGCATTTAGAACCCAATTTGGTTTGAGTAACGTTTCAAAACTATTAAATAATCCAGGCATTAAGTAACCATGCAAAAATAAGCTATCAGTATTTGCAAGTCTTCGCTATGTATAGTATATACCTCACCATTAGTGTGAAAGTGTTGAAATTTGGGTCTCTCTCACAATTCTTGATTTTTTTTTTTTTTAATTGGATGTATTATATTCATGCTTGTTTTTCTTGAGAGACTATCCTTAATGTTATCTATATTTTATATATTTTTGTGTCCTAGCAATTCAAACTCGTCTAAGTTGTCTGATACTCATCTAATGGATGATCATTCTTGAACTCGACCTCTGGCTCTCTGTAAAAAATTGGGTTCTTCATTTTTTCTTTTCTTGTTTTGTTTTTAATTTTCTTATTGATTGTTAGTAAAGGTGTCGGAGTATTTCCAAGTTTTCCATTGAAATTCTGAAAAGCCTTTCCTTTACCTAAAAAACTGTTTGGAGTCTTTTTACATCTCATGGCTTTGGATTAACAACATTAAAAGTTCGGTCTTTGGTGCATGCTAGTAGCATTCCCTTCAAAGCATGGAACTGTTGGTTTCGTTCAATTATTTTTCAATATGGTAGTATACCGGGCTGAAACTTGGTTATAATGAGTGATCATTCTGTTCCAAACATGAGCAGGAACCACAAATTCATCTACACAAGGTTCAAGTGGTACTGGTGTTGCTGGTGATAATTTGACTCATCATCAGGCTAGAGTCCGAGCTGCTGCGGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTCGCGAGCACATTAGTATGGTATGCCTTTTTATTACAAAATATGTGATCCCCGTCTTATTCTCCTTTCTGTTGATCTTGAAAATTTACTCCAATATTAAGGCCATTTCTCCCCTTGTATATAGCAACCCCCACCCCAAAGAGAGAGAGAAGCGTATGACATATATATATTTTATTTATTTACAGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAAAGACCTTTGCCTGACTCCAACAATATAGAATCGAGTGGAGAACGAGCCCCCAATGAACAACCACAATATTTTCCATTTACTGGCGGCCCTGCAAACCTGTCCTTCACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACCATACAGATGGATTGGGAAGTAGTCAAAACATATCAGGCTCACAGCTTGAAGCCCAAGAAAGATTTCTTGAACAACAGATTGAGGTATGTTATTTAATTGTAACATGAACATTACCTCGTGAACTGTCTTGTTTGGTTAGTGTAGGTTCTGTTTGGGCTCTTGTTGCTGAGCCCTCCAAAGAAAGGCATAAAACGTGCCAAATCTCAAACCAACCTCTGAGACCTACTTGTATCCAAGAAAATTTTCCTGTTTATTTCCAATCAAATATTTCTTAGAATAGCAAAAAATAAATGGCCTTTATCTCGTAAGAGAAAAGGATCCAAGAAAGCTTTTCCAATGAAATACCAAAATTCAGCCACAACAGACACCAGATCATAGAAGCTTAGGGGCAAAGCTGTAAATGGTTTAAATCTTTTAAGGCAGATCTACACATCCATAAGGTCTTCAAGCGATTCTTTGGATAAAGGCGAAGATGTTAATCCTCCCTAAAGCGACCAGCCAAGGGAGGAATTATATCTCTTTTTAGGACTTTCAACTTCCATGTTTTTTAGTAAAGATGGGTGGAATACAGGGAGGGAGAAGAGATCATTCAATTATACAAGGACTTCTTTATGGAAACACCATAAGGATGAAGATTACAATCAATGATCGCTAGCCCAAAAATAAGTTTGACTCTTATGGATAATAGAGAGAAAGGGAGCTAGTTAATTGATTTTCTATTGAGAAGGGCTTTATAAAAACGAAAATCAAAGGAAAGAGATTCAACCAAGAACTTAGTAAGTTTTTGGTTAGGGTTAAAGAACACAAATGGAAAACTACAATTGGTGGGTACTATTTTGAAGCCAAGGATCTTCCTAAAACCAAATGATGCAACAGTTCCTCACATAATATTTAGAAGATGGGGAGCGAAGGAGACCATAAGAGAACGTCTTCCATAGTCTCCTAAAGCTGTACGTAGAGCTTGGAGTAGAGTCCCCAAACTGTTGGAGTAAGTCTCATACCTAATATTACCTTAGGACTTGTTCTGGGTGAAACAACCAAAACCAGTTGGATGAAAGGGTGTGATATTTTTACAAACCAATCTTCATTAAAAATGTATATTCTTACAAACCAAGTTCCCGATCTCCAATATGCCTTCCACGCATGATTTTGACACAAATTTCTAGTTAACTAAGTGCGATTCTCTCTCTCTCTCTCTTAATAAATTATTTCTCAAAATCTCTTCCAACTTCTCCCCAATAGCCCTAGGAATTTTGAACTGAAATAAGAAGCTATACAGGATCTCCTTGAAAACTTAAATCAAAGTGATTCAACTCTTTGATGAAAGCCATGTGGATTAAGTTCAGAAAAGACTTTCGTCTCGGTTGAAAGCCTATTTCTCAAAGCCCTTGGAGATTTATCCTCTGTAGATCGCTTACAACCCCTCCTTGATGACCCTTGTAAATTTCATGGAAAGCCATATGGATTTAGTTCGAAAAAGACTTTTGTGTTGGAGGAAAACCTGTTTCCAAAGCCCTTAGAGTTGTATCCTCTGTAGATCTCTTACAACTTCTCCTCAATGCCCGTGGAAATTTCATGGAAAGTCACGTGGATTAAATTCAAAAAAGACTTTCGACTTGGAGGAAAGACTATTTTTCAAAGCCCTAGGAATAGCACTGGGAGTTTTATCCTCTGTAGATCTCTTGCAACTTCTTGGTAGCCCTTGGATTGTATTTTTATGAAAAATAATATTTCAAGGTGGCCATTCAATGAGAGATTGTGGAGCTGGCTTGTAGTATTGAAGGAAGAAATACATACATAAACTTGTTTTTAGATTTTTGTTTTAAAAAAACATAAAAGTTGTTTTTCACACCGCTTCCAAACAACTCTATATTTTCTAGAAACTATAGGGTAGAAAAATTTGAAAAGAGCATAAGGTCAAATTATCACAAGGAACATGTGATAAGTTAAGGAGATAATTCTGTTAATAAATAAATTTGCCTTTATTCAATTTCATTCAAACTAGTTTTAGTAGAACAGAGTGGGTGAGGTTGAGGGTTTTATCTATTTTGGAGAGTCCACCTTTTGTCTCAATAGCTTTTCCTTTTAAATTCAATTTTTCATATTTGCGAACAGATCCTCAAAGATCAGCTGCAACTTCTGCGTAAACCAAAAGTTGAGGAAAGCTCAAGAGCAGCAGGCGAGGCAGATAAGAAAGGGAAAAGTGTAGCATCATCGTCACCGTCGTCGTCTTCATCGGTCTCAGATTCTCAGGCACCTGGAGAAATCGAAAGGATGGTGAGATAGAAGAAATGTGCATAATTATAATGTGTAATAATACAAGACTGCAGATTCAGAATGACATAGATATCTCTTGTATACGGAAGATGTACTTGGTAAATTTTTAGAAGCAGTCTTCTTCCCATTTGCATAGCCGTGTTTGCTGGCTTGGTTGGTTGTAAATGCTGAATTTGGTGTCTCTTTTGCAGCAATTATGCGACGGTCAAAAAAGAATATTGAAAGTTCTTTCTAGCAAAAGAAGATAGTTTATTCAAAGATGTTTGGTTGCTATTTTCTTAGTCTAAAAGATGCTTTTTGTGAAGCACTTCAATTCACATGCGCATGAGTTAAAGTTAAAGCATTAATTGTTTGGAAGTGGACATTTAGAAAAGGTCCAAGTGTTGTGTTGATTTCGTTTTCTATTGTTCATATACATATGGGTTGACTGTCAAGGTCATATGTTTTTTTAATTGATGTATTAAAAGATAATAAAAGAGTGTCTTTTAGTTTCATATGGGGATATGGTTTTTTAAAATTAAACGATATCTGAACAGTATAAAACAATCTGGTTAAAAGGTGTTTATTATTATTTTTTAAATGATTGTGTTCACTGTTTATGTGTTTGAGTTTAAGTATTTTATGGTTGAATTTTGGATGGTTGGCTAATTATTAGACTTTAGATGATTCATTGTTTGGGTCTTTTGGTTGAATCTTAATCTTGACTTGGACTTTTCTTTATGGAAAATCGGGAACAAAGATTTGAACATCTAACCTAGATATCTTCATTGGATGAAAATGGATATTTTTTTTTTAAAAAAAAATTAGCATTGTGTAACTCATCACTAATAGGTGTTATTTGGATTGTGGTTTACGATAATAACTAACCATACAAATCGAAGGATAGATAGAAAAAAGGTGAAGTTAAAAAAAAAAATCAAAAGCAAACAGTGGATATAATTCAATAAAATAAAAAACAGATAGAGCAAATACAGAAACAAAACCTCCCAAATTTATGTCTAACATATGTATAAATTCATAAATTCAAGAGATCATACATGTTCTATTAGACATAAAACATCGAATATGATAGAAACATATTAAACAAAGTTCGAAAATCTATAAAACTCCATCTTAAGAGTTACGAGACTCGACTTCTAACTCAATTAAGTTAAGAGAACATAAAGAAAAAATTAAATATTTTTTTTAGTTAACAACGTATGAGATAGAAGAATTTGAATCTCTGATCTCTTGAACAAGGTTACATACCAATCATCGTTGAACAAATGATCTCTCGAACCTTACCTTTTAATTTTATGTCCAATAGACCTATAAATTTTAAAAAATATCGAATATGATAGAAAGATAATAAACAAAGTTAAAAAATCTATAAGACACCATCTTAAAAGTTATGAGACTCGACTTCTAATTCAAATAAGTTAAAAGAACATAAAGAGAAAAACACAAATATTTTTTTTAGTTAACAACATTTGAGGGAGAAGAATTCAAATATTTGATCTCTTGAACAAAGACGCCAATCACCGTTGAACAAAACTTGATGTGGAAAAAAAACAAAAGAAAGTAAATCTTATTCATTACCTTTTTAAGTCCAATTATTACAATGAATCTCACAAGAGGTGAGGTGAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAAACATAGAGAGAGAAAAAAAGGGGCAAGGGCGGGGCTGGCAGCCGGTAGCCGGTGGGAAGGTGGTTTGACCGTTCAAACGGGGGAAGTGGAAAAATAAAACGAAAAACGAAAACGAAAAACGAAAACAATGACAAAATAGAAAGGTAAGCCCTTAAGCCAGCTCTTCACCAAAGCAAAGCAACGACTTCTCGTCTTTCCTTTCAATTCATCCCAATTTTCTCTGCAAATTTCCCTTTCTCTCTCCATGGAGCCCTCCAAACTCTGCATGTTTCCAATTTCATCTCCTCCTCTTCTTCTTCACCCATAGCATTTTCTTCAATTCCTTACTCCAAGTCTCCTCGGTCCTGTTGCGGTCAACGGGGGGGCTCCTCACGTTTTGGGCAGTTTCCTGGAAGGTTCCCTCAGAATCAATCGGTCAATGAGGTCGGAGCCTTGATTCCAGGATTCTGTTGGGCTCTGATCTCTTCGCGCTCCTCCTCCGAATTCGCTCTGCTCGCTATGTCTAATCGTTTCCAGTGTAAAATTTAG

mRNA sequence

ATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCTACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTTTACCCAGCATTAGTCTATTTATCAACTTCCAAGATCAATCTGGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAGTTAATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGATTTTTCTGTTGCATTCCTTGGAATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCAGGATTGTTTCTTTCTTGGGGTTTCTCTTTGTTTTAGATAGTCTGTTTTTTTATAACTCGATAGAGTCTCTGATACAGACAAGGAAGGCCTCAGTTTCCCTCTTCTTTTCATTCGAGTATATGATTCTTGCGACAACAGCTGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTACTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACTTATGGCGTGCCTTTGCACTTGATCAGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACGCCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCGAAGAAACTAGTATGTGGGCATCTTTTTCACGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCCGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCAACAAGGAACCACAAATTCATCTACACAAGGTTCAAGTGGTACTGGTGTTGCTGGTGATAATTTGACTCATCATCAGGCTAGAGTCCGAGCTGCTGCGGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTCGCGAGCACATTAGTATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAAAGACCTTTGCCTGACTCCAACAATATAGAATCGAGTGGAGAACGAGCCCCCAATGAACAACCACAATATTTTCCATTTACTGGCGGCCCTGCAAACCTGTCCTTCACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACCATACAGATGGATTGGGAAGTAGTCAAAACATATCAGGCTCACAGCTTGAAGCCCAAGAAAGATTTCTTGAACAACAGATTGAGATCCTCAAAGATCAGCTGCAACTTCTGCGTAAACCAAAAGTTGAGGAAAGCTCAAGAGCAGCAGGCGAGGCAGATAAGAAAGGGAAAAGTGTAGCATCATCGTCACCGTCGTCGTCTTCATCGGTCTCAGATTCTCAGGCACCTGGAGAAATCGAAAGGATGCCAGCTCTTCACCAAAGCAAAGCAACGACTTCTCGTCTTTCCTTTCAATTCATCCCAATTTTCTCTGCAAATTTCCCTTTCTCTCTCCATGGAGCCCTCCAAACTCTGCATGTTTCCAATTTCATCTCCTCCTCTTCTTCTTCACCCATAGCATTTTCTTCAATTCCTTACTCCAAGTCTCCTCGGTCCTGTTGCGGTCAACGGGGGGGCTCCTCACGTTTTGGGCAGTTTCCTGGAAGGTTCCCTCAGAATCAATCGGTCAATGAGGTCGGAGCCTTGATTCCAGGATTCTGTTGGGCTCTGATCTCTTCGCGCTCCTCCTCCGAATTCGCTCTGCTCGCTATGTCTAATCGTTTCCAGTGTAAAATTTAG

Coding sequence (CDS)

ATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCTACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTTTACCCAGCATTAGTCTATTTATCAACTTCCAAGATCAATCTGGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAGTTAATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGATTTTTCTGTTGCATTCCTTGGAATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCAGGATTGTTTCTTTCTTGGGGTTTCTCTTTGTTTTAGATAGTCTGTTTTTTTATAACTCGATAGAGTCTCTGATACAGACAAGGAAGGCCTCAGTTTCCCTCTTCTTTTCATTCGAGTATATGATTCTTGCGACAACAGCTGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTACTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACTTATGGCGTGCCTTTGCACTTGATCAGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACGCCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCGAAGAAACTAGTATGTGGGCATCTTTTTCACGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCCGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCAACAAGGAACCACAAATTCATCTACACAAGGTTCAAGTGGTACTGGTGTTGCTGGTGATAATTTGACTCATCATCAGGCTAGAGTCCGAGCTGCTGCGGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTCGCGAGCACATTAGTATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAAAGACCTTTGCCTGACTCCAACAATATAGAATCGAGTGGAGAACGAGCCCCCAATGAACAACCACAATATTTTCCATTTACTGGCGGCCCTGCAAACCTGTCCTTCACTCAAATTCCCCAAAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACCATACAGATGGATTGGGAAGTAGTCAAAACATATCAGGCTCACAGCTTGAAGCCCAAGAAAGATTTCTTGAACAACAGATTGAGATCCTCAAAGATCAGCTGCAACTTCTGCGTAAACCAAAAGTTGAGGAAAGCTCAAGAGCAGCAGGCGAGGCAGATAAGAAAGGGAAAAGTGTAGCATCATCGTCACCGTCGTCGTCTTCATCGGTCTCAGATTCTCAGGCACCTGGAGAAATCGAAAGGATGCCAGCTCTTCACCAAAGCAAAGCAACGACTTCTCGTCTTTCCTTTCAATTCATCCCAATTTTCTCTGCAAATTTCCCTTTCTCTCTCCATGGAGCCCTCCAAACTCTGCATGTTTCCAATTTCATCTCCTCCTCTTCTTCTTCACCCATAGCATTTTCTTCAATTCCTTACTCCAAGTCTCCTCGGTCCTGTTGCGGTCAACGGGGGGGCTCCTCACGTTTTGGGCAGTTTCCTGGAAGGTTCCCTCAGAATCAATCGGTCAATGAGGTCGGAGCCTTGATTCCAGGATTCTGTTGGGCTCTGATCTCTTCGCGCTCCTCCTCCGAATTCGCTCTGCTCGCTATGTCTAATCGTTTCCAGTGTAAAATTTAG

Protein sequence

MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYMILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYGVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTTNSSTQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQRPLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSSSSVSDSQAPGEIERMPALHQSKATTSRLSFQFIPIFSANFPFSLHGALQTLHVSNFISSSSSSPIAFSSIPYSKSPRSCCGQRGGSSRFGQFPGRFPQNQSVNEVGALIPGFCWALISSRSSSEFALLAMSNRFQCKI

Homology

[Close]

BLAST of Lag0019798.1 vs. NCBI nr
Match: KAG6600225.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 979.2 bits (2530), Expect = 1.8e-281
Identity = 527/588 (89.63%), Postives = 543/588 (92.35%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ--GTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ  GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSTQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SS QGS GT  AGD+L+HHQARV+AAAAAASIYEKSYVYPF +TL WSPGYAVVPQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLSHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGS 480
           PL DSNN+E  GE+APNEQ QYFPFTGGPANLSFTQIPQNLFVPFQPREGTVN+TDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQNISGSQLE+QERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIER-----MPALHQSKATTSRLSFQFIPIFSANFPFS 582
           SSVSDS  PGE ER     +P    S AT     F F   F  N  F+
Sbjct: 541 SSVSDSHPPGETERTFLLLIPWKPASSATGQFFRFFFFFFFVHNIFFN 587

[Close]

BLAST of Lag0019798.1 vs. NCBI nr
Match: KAG7030884.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 974.9 bits (2519), Expect = 3.5e-280
Identity = 517/554 (93.32%), Postives = 531/554 (95.85%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ--GTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ  GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSTQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SS QGS GT  AGD+L+HHQARV+AAAAAASIYEKSYVYPF +TL WSPGYAVVPQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLSHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGS 480
           PL DSNN+E  GE+APNEQ QYFPFTGGPANLS TQIPQNLFVPFQPREGTVN+TDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSCTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQNISGSQLE+QERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIER 553
           SSVSDS  PGE ER
Sbjct: 541 SSVSDSHPPGETER 553

[Close]

BLAST of Lag0019798.1 vs. NCBI nr
Match: XP_023531768.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pepo] >XP_023531774.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 970.7 bits (2508), Expect = 6.5e-279
Identity = 515/554 (92.96%), Postives = 529/554 (95.49%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ--GTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQG QSDANQQ  GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360

Query: 361 NSSTQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SS QGS GTG  GD+L+HHQARV+AAAAAASIYEKSYVYPFA+TL WSPGYAVVPQVQR
Sbjct: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGS 480
           PL DSNN+E  GE+A NEQ QYFPFT GPANLSFTQIPQNLFVPFQPREGTVN+TDGLGS
Sbjct: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQN SGSQLEAQERFL+QQIEIL+DQLQLLRK KVE+SS  AGEADKKGKS+ASSS SSS
Sbjct: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIER 553
           SSVSDS  PGE ER
Sbjct: 541 SSVSDSHPPGETER 553

[Close]

BLAST of Lag0019798.1 vs. NCBI nr
Match: XP_022942315.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata] >XP_022942316.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata])

HSP 1 Score: 969.9 bits (2506), Expect = 1.1e-278
Identity = 514/554 (92.78%), Postives = 529/554 (95.49%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ--GTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDAN Q  GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360

Query: 361 NSSTQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SS QGS GT  AGD+L HHQARV+AAAAAASIYEKSYVYPF +TL WSPGYAV+PQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVIPQVQR 420

Query: 421 PLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGS 480
           PL DSNN+E  GE+APNEQ QYFPFTGGPANLSFTQIPQNLF+PFQPREGTVN+TDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPREGTVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQNISGSQLE+QERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIER 553
           SSVSDS   GE ER
Sbjct: 541 SSVSDSHPHGETER 553

[Close]

BLAST of Lag0019798.1 vs. NCBI nr
Match: XP_022141279.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Momordica charantia])

HSP 1 Score: 968.0 bits (2501), Expect = 4.2e-278
Identity = 513/554 (92.60%), Postives = 530/554 (95.67%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFL FLF+LDSLFFYNSIE LI+TRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLSFLFILDSLFFYNSIEYLIRTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTTNS 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGH G   DANQQGTT+S
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHHG-SHDANQQGTTSS 360

Query: 361 STQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQRPL 420
           S Q SSGTGVAGDNL+HHQARV+AAAAAASIYEKSYVYP ASTLVWSPGYAVVPQ QRPL
Sbjct: 361 SAQDSSGTGVAGDNLSHHQARVQAAAAAASIYEKSYVYPCASTLVWSPGYAVVPQTQRPL 420

Query: 421 PDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGSSQ 480
            DSNNIE +GE+APN QPQYFPFTGGPANLSFTQ PQNLFVPFQPREG+VN+TDGLGSSQ
Sbjct: 421 ADSNNIEPNGEQAPNGQPQYFPFTGGPANLSFTQFPQNLFVPFQPREGSVNNTDGLGSSQ 480

Query: 481 NISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSSSS 540
           N+SG  LE QERF++QQIE+L+ QLQLLR PKVEES+R AGEADKKGKSVASS PSSSSS
Sbjct: 481 NVSGLHLEDQERFIQQQIEMLQKQLQLLRNPKVEESTR-AGEADKKGKSVASSPPSSSSS 540

Query: 541 VSDSQAP-GEIERM 554
           VS+S  P GEIERM
Sbjct: 541 VSESHPPAGEIERM 552

[Close]

BLAST of Lag0019798.1 vs. ExPASy Swiss-Prot
Match: Q9LW77 (ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana OX=3702 GN=HRD1A PE=2 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 5.0e-173
Identity = 339/537 (63.13%), Postives = 403/537 (75.05%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LV+M  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT V+ FVKY+FYV+D+LM+GQWE+KPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTTNS 360
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE +++A   Q      +QQGT++S
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQGTSSS 360

Query: 361 STQG---SSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQ 420
             QG   SS  GV+ ++L+ H AR++AAA+AAS+Y KS VYP A+T+ WS G   VP   
Sbjct: 361 GNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSG---VP--- 420

Query: 421 RPLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLG 480
                        E+   E  Q  P    P   S                          
Sbjct: 421 -----------GTEQVSTEPDQTLPQHNLPVENSH------------------------- 480

Query: 481 SSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 535
           +  N+S ++LE   + LE  +EIL+++L  L   K E    +AGE + KGKSVA ++
Sbjct: 481 AYANMSETKLEEMRKSLETHLEILRNRLHFLETRKPE----SAGEPENKGKSVADAA 491

[Close]

BLAST of Lag0019798.1 vs. ExPASy Swiss-Prot
Match: Q6NPT7 (ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana OX=3702 GN=HRD1B PE=2 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 1.4e-170
Identity = 335/538 (62.27%), Postives = 397/538 (73.79%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLV+M  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+ +V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANQQGTTN 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G++G   ++ QQGT  
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 SST--QGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYP-FASTLVWSPGYAVVPQV 420
           SS+  QGSS +  A +N++ H+AR +AAA+AASIY +S VYP  A+TLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ- 420

Query: 421 QRPLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGL 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 460

Query: 481 GSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 535
                   +++EAQ RFLE QIE+L +QL+LL KP            D KGKSVA ++
Sbjct: 481 --------TEVEAQRRFLESQIEVLTNQLRLLEKPTT---------VDTKGKSVADTA 460

[Close]

BLAST of Lag0019798.1 vs. ExPASy Swiss-Prot
Match: Q5Z880 (ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HRD1 PE=2 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.1e-159
Identity = 308/509 (60.51%), Postives = 382/509 (75.05%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++LQTYA  S +AT   +Y+AF+SR QFYPA+VYLSTSKI  VLLLN GLV MC+ WQL
Sbjct: 1   MIRLQTYAAFSLMATATAVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K++FLG+LREAEVERLNEQ+W+E++EILFA+TIFRQDFSV+FL MV ALLL+KALHWLA
Sbjct: 61  VKRLFLGTLREAEVERLNEQAWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSVP+LSH RIVSF+ FL V+D LF  NS+ SLI  R+ASV++FFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHARIVSFMLFLLVVDCLFLSNSLRSLIHKREASVAIFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILAT+ VSTFVKYIFYVSD+LMEGQWE+K VYTFYLELI DL+HLS+Y+ FF+ IF+ YG
Sbjct: 181 ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNFRIRIADY+RYRKITSNMN+RFPDAT +ELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTTNS 360
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRA ++PP+   TA    G+      Q    +
Sbjct: 301 TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRTAARPHGVHPGV--QPVPGN 360

Query: 361 STQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQRPL 420
            T GS     AG+N++  QA++ AAA+AAS+Y +S+ YP A+ L     Y+  PQ     
Sbjct: 361 GTPGSE--RAAGENISRRQAKLEAAASAASLYGRSFAYPPANNL---NRYSTPPQ----- 420

Query: 421 PDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGSSQ 480
             ++N   SGE + + Q      T  P+  +F               G V+    + +++
Sbjct: 421 -STSNGPQSGEASTSNQSPKGHATADPSAPTFY------------ARGAVS---SVTTTR 480

Query: 481 NISGSQLEAQERFLEQQIEILKDQLQLLR 510
            +  S  +A E  ++ QIE+L+ QLQ+ +
Sbjct: 481 ELESSLQKAYENAIKSQIEMLQIQLQMFQ 481

[Close]

BLAST of Lag0019798.1 vs. ExPASy Swiss-Prot
Match: Q803I8 (E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2)

HSP 1 Score: 263.8 bits (673), Expect = 5.2e-69
Identity = 141/331 (42.60%), Postives = 201/331 (60.73%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     V++ +L +L
Sbjct: 1   MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            +K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+ + T LL +K  HWLA
Sbjct: 61  MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           + RV++ME +P++  + H R++S +  L V+D LF  ++  S+I TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSII-TRGASVQLVFGFEYA 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           IL T  ++TF+KY  +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 300
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPE+L ++D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMV 300

Query: 301 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 331
           T AKKL C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCR 330

[Close]

BLAST of Lag0019798.1 vs. ExPASy Swiss-Prot
Match: Q86TM6 (E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens OX=9606 GN=SYVN1 PE=1 SV=2)

HSP 1 Score: 261.5 bits (667), Expect = 2.6e-68
Identity = 141/331 (42.60%), Postives = 198/331 (59.82%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M +       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     V++ +L ++
Sbjct: 1   MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
             K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+ + T LL +K  HWLA
Sbjct: 61  MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           + RV++ME +P++  L H RIVS +  L +LD LF  ++  S++ TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           IL T  ++ F+KY+ +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 300
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPEEL + D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMV 300

Query: 301 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 331
           T AK+L C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCR 330

[Close]

BLAST of Lag0019798.1 vs. ExPASy TrEMBL
Match: A0A6J1FNJ3 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucurbita moschata OX=3662 GN=LOC111447399 PE=4 SV=1)

HSP 1 Score: 969.9 bits (2506), Expect = 5.4e-279
Identity = 514/554 (92.78%), Postives = 529/554 (95.49%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ--GTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDAN Q  GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360

Query: 361 NSSTQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SS QGS GT  AGD+L HHQARV+AAAAAASIYEKSYVYPF +TL WSPGYAV+PQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVIPQVQR 420

Query: 421 PLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGS 480
           PL DSNN+E  GE+APNEQ QYFPFTGGPANLSFTQIPQNLF+PFQPREGTVN+TDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPREGTVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQNISGSQLE+QERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIER 553
           SSVSDS   GE ER
Sbjct: 541 SSVSDSHPHGETER 553

[Close]

BLAST of Lag0019798.1 vs. ExPASy TrEMBL
Match: A0A6J1CI55 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011717 PE=4 SV=1)

HSP 1 Score: 968.0 bits (2501), Expect = 2.1e-278
Identity = 513/554 (92.60%), Postives = 530/554 (95.67%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFL FLF+LDSLFFYNSIE LI+TRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLSFLFILDSLFFYNSIEYLIRTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTTNS 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGH G   DANQQGTT+S
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHHG-SHDANQQGTTSS 360

Query: 361 STQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQRPL 420
           S Q SSGTGVAGDNL+HHQARV+AAAAAASIYEKSYVYP ASTLVWSPGYAVVPQ QRPL
Sbjct: 361 SAQDSSGTGVAGDNLSHHQARVQAAAAAASIYEKSYVYPCASTLVWSPGYAVVPQTQRPL 420

Query: 421 PDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGSSQ 480
            DSNNIE +GE+APN QPQYFPFTGGPANLSFTQ PQNLFVPFQPREG+VN+TDGLGSSQ
Sbjct: 421 ADSNNIEPNGEQAPNGQPQYFPFTGGPANLSFTQFPQNLFVPFQPREGSVNNTDGLGSSQ 480

Query: 481 NISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSSSS 540
           N+SG  LE QERF++QQIE+L+ QLQLLR PKVEES+R AGEADKKGKSVASS PSSSSS
Sbjct: 481 NVSGLHLEDQERFIQQQIEMLQKQLQLLRNPKVEESTR-AGEADKKGKSVASSPPSSSSS 540

Query: 541 VSDSQAP-GEIERM 554
           VS+S  P GEIERM
Sbjct: 541 VSESHPPAGEIERM 552

[Close]

BLAST of Lag0019798.1 vs. ExPASy TrEMBL
Match: A0A6J1KWZ5 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499418 PE=4 SV=1)

HSP 1 Score: 967.6 bits (2500), Expect = 2.7e-278
Identity = 513/554 (92.60%), Postives = 528/554 (95.31%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ--GTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ  GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSTQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SS QGS GT  AGD+L+HHQ+RV+AAAAAASIYEKSYVYPF +TL WSPGYAVVPQVQR
Sbjct: 361 SSSEQGSGGTSAAGDSLSHHQSRVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGS 480
           PL DSNN+E  GE+A NEQ QYFPF GGPANLS+TQIPQNLFVPFQPREGTVN+TDGL S
Sbjct: 421 PLLDSNNVEPIGEQAANEQAQYFPFAGGPANLSYTQIPQNLFVPFQPREGTVNNTDGLSS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
            QNISGSQLEAQERFL+QQIEIL+DQLQLLRK KVEESS  AGEADKKGKS+ASSS SSS
Sbjct: 481 GQNISGSQLEAQERFLQQQIEILQDQLQLLRKLKVEESS-IAGEADKKGKSIASSSQSSS 540

Query: 541 SSVSDSQAPGEIER 553
           SSVSDS  PGE ER
Sbjct: 541 SSVSDSHPPGETER 553

[Close]

BLAST of Lag0019798.1 vs. ExPASy TrEMBL
Match: A0A6J1CJF5 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011717 PE=4 SV=1)

HSP 1 Score: 963.0 bits (2488), Expect = 6.6e-277
Identity = 513/556 (92.27%), Postives = 530/556 (95.32%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFL FLF+LDSLFFYNSIE LI+TRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLSFLFILDSLFFYNSIEYLIRTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ--GTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGH G   DANQQ  GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHHG-SHDANQQGTGTT 360

Query: 361 NSSTQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SS Q SSGTGVAGDNL+HHQARV+AAAAAASIYEKSYVYP ASTLVWSPGYAVVPQ QR
Sbjct: 361 SSSAQDSSGTGVAGDNLSHHQARVQAAAAAASIYEKSYVYPCASTLVWSPGYAVVPQTQR 420

Query: 421 PLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGS 480
           PL DSNNIE +GE+APN QPQYFPFTGGPANLSFTQ PQNLFVPFQPREG+VN+TDGLGS
Sbjct: 421 PLADSNNIEPNGEQAPNGQPQYFPFTGGPANLSFTQFPQNLFVPFQPREGSVNNTDGLGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSSPSSS 540
           SQN+SG  LE QERF++QQIE+L+ QLQLLR PKVEES+R AGEADKKGKSVASS PSSS
Sbjct: 481 SQNVSGLHLEDQERFIQQQIEMLQKQLQLLRNPKVEESTR-AGEADKKGKSVASSPPSSS 540

Query: 541 SSVSDSQAP-GEIERM 554
           SSVS+S  P GEIERM
Sbjct: 541 SSVSESHPPAGEIERM 554

[Close]

BLAST of Lag0019798.1 vs. ExPASy TrEMBL
Match: A0A5A7V9K3 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001010 PE=4 SV=1)

HSP 1 Score: 947.6 bits (2448), Expect = 2.9e-272
Identity = 501/559 (89.62%), Postives = 526/559 (94.10%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSI+SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQ--GTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST  GH G+QSDANQQ  GTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANQQGTGTT 360

Query: 361 NSSTQGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQR 420
           +SS QG+SGTGV  DNL+HHQARVRAAAAAASIYEKSYVYP ASTLVWS GYAVVPQV+R
Sbjct: 361 SSSAQGTSGTGVTNDNLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVER 420

Query: 421 PLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLGS 480
           PL DSNN E++GE++PN  PQYF F GGP+NLSFTQ PQN+FVPFQPREGT N+ + LGS
Sbjct: 421 PLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGS 480

Query: 481 SQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVA-SSSPSS 540
           S N+SGSQLEAQE+FL+QQIE L++QLQLLRKPKVEESSR A E DKKGKS+A S +PS+
Sbjct: 481 SLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASETDKKGKSLAISPAPSA 540

Query: 541 SSSVSDSQAPGEIERMPAL 557
           S S SDS  PGE ER+ A+
Sbjct: 541 SLSSSDSHPPGETERVKAV 559

[Close]

BLAST of Lag0019798.1 vs. TAIR 10
Match: AT3G16090.1 (RING/U-box superfamily protein )

HSP 1 Score: 609.4 bits (1570), Expect = 3.6e-174
Identity = 339/537 (63.13%), Postives = 403/537 (75.05%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LV+M  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT V+ FVKY+FYV+D+LM+GQWE+KPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTTNS 360
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE +++A   Q      +QQGT++S
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQGTSSS 360

Query: 361 STQG---SSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYPFASTLVWSPGYAVVPQVQ 420
             QG   SS  GV+ ++L+ H AR++AAA+AAS+Y KS VYP A+T+ WS G   VP   
Sbjct: 361 GNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSG---VP--- 420

Query: 421 RPLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGLG 480
                        E+   E  Q  P    P   S                          
Sbjct: 421 -----------GTEQVSTEPDQTLPQHNLPVENSH------------------------- 480

Query: 481 SSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 535
           +  N+S ++LE   + LE  +EIL+++L  L   K E    +AGE + KGKSVA ++
Sbjct: 481 AYANMSETKLEEMRKSLETHLEILRNRLHFLETRKPE----SAGEPENKGKSVADAA 491

[Close]

BLAST of Lag0019798.1 vs. TAIR 10
Match: AT1G65040.2 (RING/U-box superfamily protein )

HSP 1 Score: 601.3 bits (1549), Expect = 9.7e-172
Identity = 335/538 (62.27%), Postives = 397/538 (73.79%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLV+M  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+ +V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANQQGTTN 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G++G   ++ QQGT  
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 SST--QGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYP-FASTLVWSPGYAVVPQV 420
           SS+  QGSS +  A +N++ H+AR +AAA+AASIY +S VYP  A+TLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ- 420

Query: 421 QRPLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGL 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 460

Query: 481 GSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 535
                   +++EAQ RFLE QIE+L +QL+LL KP            D KGKSVA ++
Sbjct: 481 --------TEVEAQRRFLESQIEVLTNQLRLLEKPTT---------VDTKGKSVADTA 460

[Close]

BLAST of Lag0019798.1 vs. TAIR 10
Match: AT1G65040.3 (RING/U-box superfamily protein )

HSP 1 Score: 468.8 bits (1205), Expect = 7.5e-132
Identity = 280/538 (52.04%), Postives = 335/538 (62.27%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINL                 
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINL----------------- 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
                                                                  LHW+A
Sbjct: 61  ------------------------------------------------------GLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANQQGTTN 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G++G   ++ QQGT  
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 SST--QGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYP-FASTLVWSPGYAVVPQV 420
           SS+  QGSS +  A +N++ H+AR +AAA+AASIY +S VYP  A+TLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ- 389

Query: 421 QRPLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDGL 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 389

Query: 481 GSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 535
                   +++EAQ RFLE QIE+L +QL+LL KP            D KGKSVA ++
Sbjct: 481 --------TEVEAQRRFLESQIEVLTNQLRLLEKPTT---------VDTKGKSVADTA 389

[Close]

BLAST of Lag0019798.1 vs. TAIR 10
Match: AT1G65040.1 (RING/U-box superfamily protein )

HSP 1 Score: 344.7 bits (883), Expect = 1.6e-94
Identity = 201/359 (55.99%), Postives = 238/359 (66.30%), Query Frame = 0


Query: 180 MILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTY 239
           MILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM Y
Sbjct: 1   MILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNY 60

Query: 240 GVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM 299
           G+PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEM
Sbjct: 61  GLPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEM 120

Query: 300 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANQQGTT 359
           T AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G++G   ++ QQGT 
Sbjct: 121 TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTG 180

Query: 360 NSST--QGSSGTGVAGDNLTHHQARVRAAAAAASIYEKSYVYP-FASTLVWSPGYAVVPQ 419
            SS+  QGSS +  A +N++ H+AR +AAA+AASIY +S VYP  A+TLVWS G +++PQ
Sbjct: 181 TSSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ 240

Query: 420 VQRPLPDSNNIESSGERAPNEQPQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNHTDG 479
                                                                       
Sbjct: 241 ------------------------------------------------------------ 281

Query: 480 LGSSQNISGSQLEAQERFLEQQIEILKDQLQLLRKPKVEESSRAAGEADKKGKSVASSS 535
                    +++EAQ RFLE QIE+L +QL+LL KP            D KGKSVA ++
Sbjct: 301 ---------TEVEAQRRFLESQIEVLTNQLRLLEKPTT---------VDTKGKSVADTA 281

[Close]

BLAST of Lag0019798.1 vs. TAIR 10
Match: AT4G25230.1 (RPM1 interacting protein 2 )

HSP 1 Score: 94.7 bits (234), Expect = 2.9e-19
Identity = 97/343 (28.28%), Postives = 153/343 (44.61%), Query Frame = 0


Query: 25  SRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKE 84
           S G    AL  L  S   + LL N  L +  +L    K +F G L + E ++L E+    
Sbjct: 42  SLGDSEHALELLLGSYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANY 101

Query: 85  L------MEILFAITIFRQDFSVAFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSH 144
           +      + ++   TIF+    V +   +T L  +K    LA+ R+E +  +PS    ++
Sbjct: 102 IIYKGTFLPLVIPPTIFQ---GVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTY 161

Query: 145 IRIVSFLGFLFVLD------SLFFYNSIESLIQTRKASVSLFFSFE----YMILATTAVS 204
            R+ S L  +  +D      SL  YN+I S +           +FE     +I     + 
Sbjct: 162 FRVYSVLFLVLSVDMFWIKLSLMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLD 221

Query: 205 TFVKYIF----------YVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMT 264
            ++ ++           ++  +      E K +    L    D+  L M L  +L I+  
Sbjct: 222 MWINHLAVKNSDCQRSKFIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWL 281

Query: 265 YGVPLHLIRELYEIFRNFRI-------RIADYIRYRKITSNMNDRFPDATPEELNSSDAT 324
           +G+  HL+  +  +F N R        RI  YI+ R     ++   PDAT EEL + D  
Sbjct: 282 HGIAFHLVDAV--LFLNIRALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDE 341

Query: 325 CIICREEMTVAKKLVCGHLFHVHCLRSWLER----QHTCPTCR 331
           C ICRE M  AK+L C HLFH+ CLRSWL++     ++CPTCR
Sbjct: 342 CAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379

The following BLAST results are available for this feature:

BLAST of Lag0019798.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600225.1	1.8e-281	89.63	ERAD-associated E3 ubiquitin-protein ligase HRD1A, partial [Cucurbita argyrosper...	[more]
KAG7030884.1	3.5e-280	93.32	ERAD-associated E3 ubiquitin-protein ligase HRD1A [Cucurbita argyrosperma subsp....	[more]
XP_023531768.1	6.5e-279	92.96	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pe...	[more]
XP_022942315.1	1.1e-278	92.78	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata] >XP_...	[more]
XP_022141279.1	4.2e-278	92.60	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Momordica cha...	[more]

BLAST of Lag0019798.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW77	5.0e-173	63.13	ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana OX=370...	[more]
Q6NPT7	1.4e-170	62.27	ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana OX=370...	[more]
Q5Z880	1.1e-159	60.51	ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica...	[more]
Q803I8	5.2e-69	42.60	E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2	[more]
Q86TM6	2.6e-68	42.60	E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens OX=9606 GN=SYVN1 PE=1 SV=...	[more]

BLAST of Lag0019798.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNJ3	5.4e-279	92.78	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucurbita moschata OX=...	[more]
A0A6J1CI55	2.1e-278	92.60	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Momordica c...	[more]
A0A6J1KWZ5	2.7e-278	92.60	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1CJF5	6.6e-277	92.27	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1 OS=Momordica c...	[more]
A0A5A7V9K3	2.9e-272	89.62	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucumis melo var. maku...	[more]

BLAST of Lag0019798.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16090.1	3.6e-174	63.13	RING/U-box superfamily protein	[more]
AT1G65040.2	9.7e-172	62.27	RING/U-box superfamily protein	[more]
AT1G65040.3	7.5e-132	52.04	RING/U-box superfamily protein	[more]
AT1G65040.1	1.6e-94	55.99	RING/U-box superfamily protein	[more]
AT4G25230.1	2.9e-19	28.28	RPM1 interacting protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 484..504
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 511..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 529..546
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 511..525
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..373
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 1..463
None	No IPR available	PANTHER	PTHR22763:SF174	SUBFAMILY NOT NAMED	coord: 1..463
None	No IPR available	CDD	cd16479	RING-H2_synoviolin	coord: 289..330 e-value: 4.09078E-27 score: 101.606
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 272..336
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 292..329 e-value: 2.0E-5 score: 34.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 291..330 e-value: 1.5E-10 score: 41.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 292..330 score: 12.415513
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 264..336 e-value: 7.0E-23 score: 81.8

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lag0019798	Lag0019798	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lag0019798.1.exon8	Lag0019798.1.exon8	exon
Lag0019798.1.exon7	Lag0019798.1.exon7	exon
Lag0019798.1.exon6	Lag0019798.1.exon6	exon
Lag0019798.1.exon5	Lag0019798.1.exon5	exon
Lag0019798.1.exon4	Lag0019798.1.exon4	exon
Lag0019798.1.exon3	Lag0019798.1.exon3	exon
Lag0019798.1.exon2	Lag0019798.1.exon2	exon
Lag0019798.1.exon1	Lag0019798.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Lag0019798.1	cds.Lag0019798.1_8	CDS
cds.Lag0019798.1	cds.Lag0019798.1_7	CDS
cds.Lag0019798.1	cds.Lag0019798.1_6	CDS
cds.Lag0019798.1	cds.Lag0019798.1_5	CDS
cds.Lag0019798.1	cds.Lag0019798.1_4	CDS
cds.Lag0019798.1	cds.Lag0019798.1_3	CDS
cds.Lag0019798.1	cds.Lag0019798.1_2	CDS
cds.Lag0019798.1	cds.Lag0019798.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lag0019798.1	Lag0019798.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity