Lag0019775.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0019775.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr5: 45332308 .. 45338037 (+)
Sequence length1074
RNA-Seq ExpressionLag0019775.1
SyntenyLag0019775.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCGGCGCCCTACGCCGAAAGGATTTGGAAGTTGGAATAAATGTGCTTTGTTAAATTATTGAAGAGTTAAAAAATGGGGTAAAATATCTTTTTGGTCTCTCATGTTTCGAGTCAATTTCTAATAGGTCCCTAAGTTTCAAAATCAGACAATCAAGTCCTTACTGTTTCGGAAATATTTCTATTGAGTCCCTCTAAGGCTAATGTGGCAATTTTAAATAATAAAATATTGATTTTTAATTAAAATAATAATATATTAATAATAAAATAATAAAATAATAATAATAATTATTATTATTAAAATATAATAATAAAATAAAATTTTATTATTATTAAAAAAAGTTCTCTCTCTCCTCTTTCCCACTTTCCCTTTCTTCTTCTCCCCGCCGCCCCACCTTCTCTCCCCCACCATTTCTTTCTTCTTCTCTCCGCCGCCGGATCTCCTTCCCGTTGCTGCCGGAGATCCTCCCCATTATCCTCAACCCATCGTCGAAGAATCAATCGTCGTAAAGGGCACCCACTCAAGTAAACAAACCGCCACCATCGACCGCACTACCGACAAGGGGCTTCCACTATCGTTGATCGAAAACTTCCCGTCGTCCGGCTGGCGAGCTCGCTTACGATCGTAATTCGATTCCGGCAACGCCTTCGCATTTTGTTTCTTCTGAATCGTGGGTTTCGCTTCTCTTGAAGGTAGAAGATTAGGGCGGGATTTGTGGGGCACAGAGTTACCAGTGCACAAAGGGTAGTGGACAAAGGGTATTTAGAGGGTTTGTTTTTGGGTTTAGGGAGAAGGGGTGTGGGGGTAAAGGGGCGGCCATTGAAGGAGGATACGACCTTGAGAGAGAGGTCGAGAGAAGAGACGGGACCAGACCCGAAGGGGAAGAACTGGTTCGAGTTCGAGATTGGGTTTTTCTCAAAGACATCAACCTATCGCCGGACGTTGACACAGCAGCGGTGATGAGCTCCGGCGGCGACGAGAGGAGAACCGGCGGCGGGGAGAAGAAGAAACAGAAGGTGGGGGCGGCGGGGAGAAGAAGAGAGGGAAAGTGAGAGAGGAGAGAGAGAAAGTTCTTTTTAATAATAATTATTATTATTTTAGTTTTTTATTATTATTATATTTTAATAATAATAATAATATTATTATTATAATTTTATTATAATAATAATATTATTATTATTTTATTATAATAATAATAATATTATTATTTTATTATAATAATATTATTATTTTAATTAAAAATCAATATTTTATTATTTTAAATTGCCACGTCAGCCCTAAAAGGACTCAATAGAAACATTTCCGAAACAGTAGGGATTTGATTGTCCGATTTTGAAACTTAAGGACCTATTAGAAATTGACTCGAAATATGAGGGACCAAAAATGTATTTTACCCTAAAAAATTTAACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTTAATGTGTTGTTTTCTTTTAAAAAAAATTACCGTGATCTTTCAACAACAATCTATAATCTATATACCTTAAAAGAGGTTTAAGGACACAAGAACTTATGATTTTCTCCTTTGTCTAGGTTTAATTAGTATTATTTCTATAAATATACATTTAGATTATTTTCTGTTTTATACTTTAATGTGCATTGTTGAGGATCCCACATTGAAAAGATAAGTAGAGACCTCACAATTTATAAGATGTATGGTTTACTCCACTCATTGCTGTTGAGGATCTCACATTGAAAAGATAAGTGGAGACCTCACAATTTATAAGATGTATGTGTATGCATGGTTTACTCCATTCATTATCAATTGTACTTAAATTAGGCTAAAATAATGTGTAAACTAATTCTCTCGCCACACGCAGTTCTAAAAAATTTGCATCCACTATGAAACCTAAATGGAAAGAAAAAAAAATCAATTTAGTCTAAGAGTAACTCGATTTTGTATCTGGTAGTTATTAGGAATAGACAAATAATAAGATCTACATCCAAACTCTTCTCCATCTTTAGTCAACTTGAACATGATTGATAGGTCAGAAGTTTGAAATCTCGACTTGTTGAACTTAAAAATTAAAATTCAAAAAAAAAACTTATACTTCTTTATTTGTAATATAATATTAACAATAATGGTTATAAATTTCTTTTAAAAAAATTATATGGTAGTTTCTTTTAAGTGTTTTTAAAAGATAATTTCATAATTTAAAAATTAATGAATTTTTGTCTTTGTCTTTTAAATTGTCAATCCAAAATGTGATTTTCTTAATTGATTAATTCAATTTTTTTTCTTCTTTTAAGTTCAACAACAATTGGGGTAGGGAGATTTGAACTTCTAACCTCTTGGTTGAGGGTACATGTCAATTATCGTTGAACTATACTCACTTTGACAATTGATTAATTCAATTTTGTTGTTTGAAGAAATGCATTTTGTTAAACTAGGTATAAAATAGAAGATCAATTTCATCTAAATTATTACGAATATAGAAACAAATGTCTAACCTACCTTATTTTCGAAGGTAAAATCTTGAACTACAATTTTTTTTTGTTCTTGTGCTTTAACCTTTTATGTCATTTTATTTGAATGAGGTGAGAGTCTAAAAACTTCAGCTTGGTTGAACATAATGAAAGGATAGAAAATGGGTTAAAATTAATTCTATTTTAGAGTGTAATCGATAGTGTCCAACTATATTATTTTTATACATTCACACACTTTGAAAAGATTCAGGGTGCTTGTAAATATAAATATAAATATAAATATATAAAAATACAGATACAGATACGTACATACATATCCATTTTGAAAAAAAAAATCGATTGCTTGCAAATAACTTATTACATCAAAATTTTATGATTAAAGAATAAGAAAATAAAACCAAAGTAAAACTAGGGTGGAATCATAGGAACTCAAAATATAATTTAATCTTTTAAAAAACAAACCCTTCAAACGTGTCCCATAAGGTTGAAAAATACAACAAAAAGTCAAGCTACAAAATTTAATGTTGATTTTTGTCTACTTCCGTTTACTACCAAAGTCAAGTGCTTGTTTTATCACACTTTGTGTACGTTTTTTTTTGGTTAATTTTATTGGGTCAATTTGAATCTACACACATTTTTAAATGACAAGTAGTTTTCGAATGTACATTTGAAAAGCTTTATTTTTAAAGTTCTAAAAGATTGAAAAAGAATATATATATATTTTTTCCTTCGACTTACTATTGCAAATCATATACAATACATATAATAATATAACAGTAAATTAAGGCTAGGAGCATAGTTCAACTGACATAAAACTTGTATTAATGACTGAGGGGTTTGTGGTTTGAATCTCCTACCCCACGTGTTGTAAAAAAAACGCTTGATTCCATTAAAAAAAACATTTGGATAAAATTTTTAAGTTGTGTTTTGGGTTAAGTTATTTTTAAACAGCTATTTAATCCAACTTTGAAAATAAAATTTAAACTTTATGAACACAATTTATGACTTATTGTCTTTTTATATTTAGAATAATACTTGGTTGCATATCGGTACATTGAGATCTCTCTACATATCTCAGTAAAATTTTGACAATTAAAAAAAGAGAAAGGTAGAAAATTTTAATGGTGGTGTATAAGGAGATCCTAGTATGCAGCCAAATATTGTCCTTACATTTATCTCTTTGGTATGATTTCTTTAGCAAAATTTTAATATTTAAAAAATAGTTTGGGATGAAAAGGAAAATTAACAACTTTCTTATTTAACATTAATTAAAAGGGGTACATATGATTTGCAACAGGTAGTTTTGATGATTAAATTACGTAAAAGAGAACTTATGATATTTTCTCTTTTAAGAATGACAAAAAAGATGAGTTATATATGATTTTATGCTTGTCAGCTAAAAAAGAATCATATATAATCAATTTGTTGCCTATGTAGTATTAATGATATATTTTTTTAGTTCAACGACATGTCAGGATATGAGTTTTGAATCTCTAATGAAAGTAAATCACCTAAGCTATGTTGATGTTGATGTTGTTTGCTATCATAATTGAATTATATTCAATAACTTTGATTTGATTTTATTGGGTAGAATTTCAAACTTCATTGGAAATTGTTTAGTAATTCTTTTTTTTTTTTTTTTTTTCTATTTTGTTATTTATAAAAGATAGCTCATAATATACTCTTTTGTCTATTTGTCTTTGACACATAATGACATATGCATATGGCTAATTTGTTGGCCCAAGTTTGCTTTTGAGTTGAATAAAATTCAAAAGGAAATGCCAATTTCAATAATGGGTTGGCCCATTCCATTCAATTCAGCCATCTCTTACAATTTCATGGTTGGGTCTATTATTTTTAATTTTTTTTTTTTTTTTGTTTTTAATAAGGTTATGGTTTTTAAAGGTTATGATCATGTGGCTAGGTCGTAAAAGTTATTATGCATTTGAAATCATTTGAATTTGTTGTTTATAAATTTAAGATTTTTTTTTTTTTTGGTTAGATACCATATAACAACCTACTATTATTTTAAAAGTCAACAAAGCATAGTTTGATCAACTGGCATAAAACTTTTACCTCAATCAGAAAGTTAGAGGTTCAAATTAAAAACTTAATTATTTTAAATAGTGGGTCATCTATACAAATGGAAAGAAAATAAAAATGAGAATAATTATACAAACTTATTCCTATTAATCTTTTTTTGTCCTAAAATTAGAAATTGTATTTTTAAAAATCTTATGCATGGGCCGGCGCCCTACGCCGAAAGGATTTGGAAGTTGGAATAAATGTGCTTTGTTAAATTATTGAAGAGTTAAAAAATTGGGTAAAATACCTTTTTGGTCCCTCATGTTTCGAGTCAATTTCTAATAGGTCCCTAAGTTTCAAAATCAGACAATCAAGTCCTTACTGTTTTGGAAATATTTCTATTGAGTCCCTCTAGGGCTGATGTGGCAATTTTAAATAATAAAATATTGATTTTTAATTAAAATAATAATATATTAATAATAAAATAATGATAATAATAATTATTATTAAAATATAATAATAAAATAAATTATTATTATTATTAAAAAAAAGTTCTCTCTCTCCTCTTTCCCACTTTCCCTTTCTTCTTCTCCCCGCCGCCCACCTTCTCTCCCCACCTTTTCTTTCTTCTTCTCTCCGCCGCCGGATCTCCTTCCCGTTGCTGCCGGAGATCCTCCCCGTTATCCTCAACCCATCGTCGAAGAATCAATCGTCGTAAAGGGCACCCACTCAAGTAAACAAACCGCCACCATCGACCGCACTACCGACAAGGGGCTTCCACTATCGTTGATCGAAAACTTCCCGTCGTCCGGCTGGTGAGCTCGCTTACGATCGGAATTCGATTCCGGCAACGCCTTCGCATTTTGTTTCTTCTGAATCGTGGGTTTCGCTTCTCTTGAAGGTAGAAGATTAGGGCGGGATTTGTGGGGCACAGAGTTACCCGTGGACAAAGGGTATTTAGAGGGTTTGTTTTTGGGTTTAGGGAGAAGGGGTGTGGGGGTAAAGGGGCGACCATTGAAGGAGGATACGACCTTGAGAGAGAGGTCGAGAGAAGAGACGGGACCAGACCCGAAGGGGAAGAACTGGTTCGAGTTCGAGATTGGGTTTTTCTCAAAGACATCAACCTATCGCCGGACGTTGACACAGCAGCGGTGATTTGCTCCGGCGGCGACGGGAGGAGAACCGGCGGCGGGGAGAAGAAGAAACAGAAGGTGGGGGCGACGGGGAGAAGAAGAGAGGGAAAGTGA

mRNA sequence

ATGGGCCGGCGCCCTACGCCGAAAGGATTTGGAATTCTCTCTCTCCTCTTTCCCACTTTCCCTTTCTTCTTCTCCCCGCCGCCCCACCTTCTCTCCCCCACCATTTCTTTCTTCTTCTCTCCGCCGCCGGATCTCCTTCCCGTTGCTGCCGGAGATCCTCCCCATTATCCTCAACCCATCGTCGAAGAATCAATCGTCGTAAAGGGCACCCACTCAAGTAAACAAACCGCCACCATCGACCGCACTACCGACAAGGGGCTTCCACTATCGTTGATCGAAAACTTCCCGTCGTCCGGCTGGCGAGCTCGCTTACGATCGGAGAAGGGGTGTGGGGGTAAAGGGGCGGCCATTGAAGGAGGATACGACCTTGAGAGAGAGGTCGAGAGAAGAGACGGGACCAGACCCGAAGGGGAAGAACTGGTTCGAGTTCGAGATTGGGTTTTTCTCAAAGACATCAACCTATCGCCGGACGTTGACACAGCAGCGGTGATGAGCTCCGGCGGCGACGAGAGGAGAACCGGCGGCGGGGAGAAGAAGAAACAGAAGTTCTCTCTCTCCTCTTTCCCACTTTCCCTTTCTTCTTCTCCCCGCCGCCCACCTTCTCTCCCCACCTTTTCTTTCTTCTTCTCTCCGCCGCCGGATCTCCTTCCCGTTGCTGCCGGAGATCCTCCCCGTTATCCTCAACCCATCGTCGAAGAATCAATCGTCGTAAAGGGCACCCACTCAAGTAAACAAACCGCCACCATCGACCGCACTACCGACAAGGGGCTTCCACTATCGTTGATCGAAAACTTCCCGTCGTCCGGCTGGGAGAAGGGGTGTGGGGGTAAAGGGGCGACCATTGAAGGAGGATACGACCTTGAGAGAGAGGTCGAGAGAAGAGACGGGACCAGACCCGAAGGGGAAGAACTGGTTCGAGTTCGAGATTGGGTTTTTCTCAAAGACATCAACCTATCGCCGGACGTTGACACAGCAGCGGTGATTTGCTCCGGCGGCGACGGGAGGAGAACCGGCGGCGGGGAGAAGAAGAAACAGAAGGTGGGGGCGACGGGGAGAAGAAGAGAGGGAAAGTGA

Coding sequence (CDS)

ATGGGCCGGCGCCCTACGCCGAAAGGATTTGGAATTCTCTCTCTCCTCTTTCCCACTTTCCCTTTCTTCTTCTCCCCGCCGCCCCACCTTCTCTCCCCCACCATTTCTTTCTTCTTCTCTCCGCCGCCGGATCTCCTTCCCGTTGCTGCCGGAGATCCTCCCCATTATCCTCAACCCATCGTCGAAGAATCAATCGTCGTAAAGGGCACCCACTCAAGTAAACAAACCGCCACCATCGACCGCACTACCGACAAGGGGCTTCCACTATCGTTGATCGAAAACTTCCCGTCGTCCGGCTGGCGAGCTCGCTTACGATCGGAGAAGGGGTGTGGGGGTAAAGGGGCGGCCATTGAAGGAGGATACGACCTTGAGAGAGAGGTCGAGAGAAGAGACGGGACCAGACCCGAAGGGGAAGAACTGGTTCGAGTTCGAGATTGGGTTTTTCTCAAAGACATCAACCTATCGCCGGACGTTGACACAGCAGCGGTGATGAGCTCCGGCGGCGACGAGAGGAGAACCGGCGGCGGGGAGAAGAAGAAACAGAAGTTCTCTCTCTCCTCTTTCCCACTTTCCCTTTCTTCTTCTCCCCGCCGCCCACCTTCTCTCCCCACCTTTTCTTTCTTCTTCTCTCCGCCGCCGGATCTCCTTCCCGTTGCTGCCGGAGATCCTCCCCGTTATCCTCAACCCATCGTCGAAGAATCAATCGTCGTAAAGGGCACCCACTCAAGTAAACAAACCGCCACCATCGACCGCACTACCGACAAGGGGCTTCCACTATCGTTGATCGAAAACTTCCCGTCGTCCGGCTGGGAGAAGGGGTGTGGGGGTAAAGGGGCGACCATTGAAGGAGGATACGACCTTGAGAGAGAGGTCGAGAGAAGAGACGGGACCAGACCCGAAGGGGAAGAACTGGTTCGAGTTCGAGATTGGGTTTTTCTCAAAGACATCAACCTATCGCCGGACGTTGACACAGCAGCGGTGATTTGCTCCGGCGGCGACGGGAGGAGAACCGGCGGCGGGGAGAAGAAGAAACAGAAGGTGGGGGCGACGGGGAGAAGAAGAGAGGGAAAGTGA

Protein sequence

MGRRPTPKGFGILSLLFPTFPFFFSPPPHLLSPTISFFFSPPPDLLPVAAGDPPHYPQPIVEESIVVKGTHSSKQTATIDRTTDKGLPLSLIENFPSSGWRARLRSEKGCGGKGAAIEGGYDLEREVERRDGTRPEGEELVRVRDWVFLKDINLSPDVDTAAVMSSGGDERRTGGGEKKKQKFSLSSFPLSLSSSPRRPPSLPTFSFFFSPPPDLLPVAAGDPPRYPQPIVEESIVVKGTHSSKQTATIDRTTDKGLPLSLIENFPSSGWEKGCGGKGATIEGGYDLEREVERRDGTRPEGEELVRVRDWVFLKDINLSPDVDTAAVICSGGDGRRTGGGEKKKQKVGATGRRREGK
Homology
The following BLAST results are available for this feature:
BLAST of Lag0019775.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0019775.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0019775.1 vs.
Match NameE-valueIdentityDescription
BLAST of Lag0019775.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..357

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0019775Lag0019775gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0019775.1.exon1Lag0019775.1.exon1exon
Lag0019775.1.exon2Lag0019775.1.exon2exon
Lag0019775.1.exon3Lag0019775.1.exon3exon
Lag0019775.1.exon4Lag0019775.1.exon4exon
Lag0019775.1.exon5Lag0019775.1.exon5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0019775.1cds.Lag0019775.1CDS
cds.Lag0019775.1cds.Lag0019775.1_2CDS
cds.Lag0019775.1cds.Lag0019775.1_3CDS
cds.Lag0019775.1cds.Lag0019775.1_4CDS
cds.Lag0019775.1cds.Lag0019775.1_5CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0019775.1Lag0019775.1-proteinpolypeptide