Lag0019753.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACTTTGGTGTTTTCAGCCATCGACACCGGTCGAGCCGCTCGTCATCTCTTGCAAACCGCTCCGCCGAACTTGCCGGGGCTGCCCTCACTGCCTAAACCAACAGCACTGCCGCCTCTACCGCCCTTGCCAACGATGCCGAACCCGACGACGGGGCTGGGAATTCCCCCTATTCCAAATCTTCCACAGCCAACATTGCCAACTACTCAACCATCTCTGCCTAAGTTACCTCCGCTTCCAAGCTTTCCCGGTAACATTCCGACCGGGGTGGCTCTACCTCCGCTCCCGACAACTTCGCTTCCGAACCTACCACCGGTCTCCACCATCCCGACGATGTTCCCGTCGATTCCTTTCCTTTCCCCGCCGCCAGCCACCACCTCTTCACCTTGA ATGGCTACTTTGGTGTTTTCAGCCATCGACACCGGTCGAGCCGCTCGTCATCTCTTGCAAACCGCTCCGCCGAACTTGCCGGGGCTGCCCTCACTGCCTAAACCAACAGCACTGCCGCCTCTACCGCCCTTGCCAACGATGCCGAACCCGACGACGGGGCTGGGAATTCCCCCTATTCCAAATCTTCCACAGCCAACATTGCCAACTACTCAACCATCTCTGCCTAAGTTACCTCCGCTTCCAAGCTTTCCCGGTAACATTCCGACCGGGGTGGCTCTACCTCCGCTCCCGACAACTTCGCTTCCGAACCTACCACCGGTCTCCACCATCCCGACGATGTTCCCGTCGATTCCTTTCCTTTCCCCGCCGCCAGCCACCACCTCTTCACCTTGA ATGGCTACTTTGGTGTTTTCAGCCATCGACACCGGTCGAGCCGCTCGTCATCTCTTGCAAACCGCTCCGCCGAACTTGCCGGGGCTGCCCTCACTGCCTAAACCAACAGCACTGCCGCCTCTACCGCCCTTGCCAACGATGCCGAACCCGACGACGGGGCTGGGAATTCCCCCTATTCCAAATCTTCCACAGCCAACATTGCCAACTACTCAACCATCTCTGCCTAAGTTACCTCCGCTTCCAAGCTTTCCCGGTAACATTCCGACCGGGGTGGCTCTACCTCCGCTCCCGACAACTTCGCTTCCGAACCTACCACCGGTCTCCACCATCCCGACGATGTTCCCGTCGATTCCTTTCCTTTCCCCGCCGCCAGCCACCACCTCTTCACCTTGA MATLVFSAIDTGRAARHLLQTAPPNLPGLPSLPKPTALPPLPPLPTMPNPTTGLGIPPIPNLPQPTLPTTQPSLPKLPPLPSFPGNIPTGVALPPLPTTSLPNLPPVSTIPTMFPSIPFLSPPPATTSSP Homology
BLAST of Lag0019753.1 vs. NCBI nr
Match: XP_038904304.1 (RNA-binding protein 12-like [Benincasa hispida]) HSP 1 Score: 173.3 bits (438), Expect = 1.3e-39 Identity = 105/131 (80.15%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of Lag0019753.1 vs. NCBI nr
Match: XP_023518060.1 (proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 172.6 bits (436), Expect = 2.3e-39 Identity = 100/130 (76.92%), Postives = 107/130 (82.31%), Query Frame = 0
BLAST of Lag0019753.1 vs. NCBI nr
Match: XP_023518061.1 (protein PELPK1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 166.0 bits (419), Expect = 2.2e-37 Identity = 101/133 (75.94%), Postives = 106/133 (79.70%), Query Frame = 0
BLAST of Lag0019753.1 vs. NCBI nr
Match: KAG7027509.1 (hypothetical protein SDJN02_11523, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 157.1 bits (396), Expect = 1.0e-34 Identity = 93/130 (71.54%), Postives = 101/130 (77.69%), Query Frame = 0
BLAST of Lag0019753.1 vs. NCBI nr
Match: KAG6595525.1 (hypothetical protein SDJN03_12078, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155.6 bits (392), Expect = 2.9e-34 Identity = 92/130 (70.77%), Postives = 101/130 (77.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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