Lag0018798.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAACCGCGTGGCTGCTGTGGCGAAGATTACGCCGAGGCAGTTTCTGGCTCAGCTGGGGAACAAGCAAAGGGCCATTGCGAAGCCTTGCGATGTGTTCATAAATCATAGAGGCGTCGACACGAAGAAGACGGTGGCGGCGCTGCTCTACGACAGGCTTGTCCGGGTGAACCTGCGCCCCTTCCTGGATTACAGGAATTTGAAGCCTGGAGAGAAGCTCTTCGATGAAATTCATGGCGCCATTCGCCAGTGTAAAGTTGCTGTCGCTGTCTTTTCGCCTCGCTATTGTGAGTCCTACTTTTGCCTTCATGAGTTGGCTATGATGATCGAGTCCAACAAGAAGGTATGTTTATGATTTTTTTTTTTTTTTTTATTAATGGAATAGTATTTGCGATTTCACAAACTAAAATCGAGTAAAAATTTATCCTAAAAAATAGAAAGGTAATTTGTTATAATCTCATAGAATTCTGAAATTCATCTCTCATGAACGTGATTGTTATATGGATTATTCTCAAATCAAGGATGTGGTTACTTTATAAGAATTAAGATGTAAATAAGCAATTAGATAACAATTAATAATATAATTTGGTTTCTATTTTGTTTTGAATTATTCTTGAACACAGGTCATTCCCATATTTTGTGATGTAAAACCATCTCAACTTCGCATAGAGGATCACGATGAATATGAAATAGATGAGCTAAGGAGGTTCAATTGGGCTCTCCAAGAAGCTAAACAGTTTGACGGACTCAAATTTAATTCCTCAAAAGAGTAAGATAAGCCTAAATATAAAATTTCTCCATATATATATATATATATATATGTCAACTTTAAATTTTGATTTATATATTATAGCAAAGTATTTTTTCTCCTAATTAATTGTTTCTCTGTGTTTCTTAATTAGGACCTTATCAGAAGTTGTCACAAAGGCTTCAAATATTGTCATCAGGAGTTTGGTTGAGATGGGCAACATCTAACATTTTCTTATTCTTTTACACATCATTCAATATTCATTATCTCCCCTCTCTCTCTCTTTCTTCAACAAAAAGAAAATGTATCATAAGATCCTGTAATTCTTTGGTAATAATAATATACAAAAAAATAAAAAAAAAATTCATTCATTCTTAAACTTTCACACTTGTTTGGTTAGTTAACACACATCTTTAAATAATTTGTTATTATTACTATTTTTTTGATTTGATATTTGAACTTTGTATAAAATTTTGTTTTGGTCTCCATTGCTAGAGTAAATATTGGAAAACAAATTAACACATAAATACTTAGGGTTTAGGGTTGAGGGACAATTATACCACTAGAAGAAATTATTGAACCTTTTGAAACAGAAAGAAGAAAAACGTTCAACCTTAGAAATAAATAAATAAATAAATAACATCGCTAAAATTCAAAAATCGACACAAATAAGCTTTAGGGACGAAAAATAAAACTTGCAAAAAACGTCAATGAAAGATAGTCGGACAAAATTTTTAGTGTTTGAAATTTTCGTTGCAAACTGCGACGGAATTAAAAAAAAAAAAAAAAAAATCGTTGTTTGCCACAAAATCTCTTTTTCGTTGCACGAATGCATGCGATGAAAATAACATATTTCATCACAATTCTTGCAATGAAAAGAGCAATCTCATTGCAATTCTTGCAACAAAAAGAGCAATCACAAGTTGTGTGCATTAACCTATGCGTCGAAACTTAGTTTTCATCACAAAATTCCTTTTTGACATTGCAACGATTCTAAAAGTTCAATTGAATCTAAAATTTCAAATATTCATCCATTTATTTTCCTCGTATATATCTTGTATTTAAACCAAAAACACGTTCTAAGGGATAAACATTATGTACAAATATTCAAATAGTATAAAATAATACATAATAATATATTAATAAAAACAAGGATAACAACATTTATATTTACCATAGCTTTTATAAGGATATCAAGTTTGTTGCAGTTACAAATTATGTATAATAAACTTTTATAAAACATAAAGACATCACCTATCTCCAAAATGAGCAAAAAAGTCCCAGTACCTATCTTCAAAATGTCAGGTTATACTCTCGTGACTTGCTTGTTCAGGCCGAGGCTCAGTTGGAGGAGGTGTTGCAGGAGGAAGTGGTATACTGGAAACAGAGGTCCAGGGAGTTATGGCTTCGAGAAGGGGATCGCAATACTCGGTGGTTCCACTGTCGAGCCTCTTACCGCCAGAAGCTTAATCGCATTGGAGGATTGGAGGATGATCAGGGAGTGTGGTAA ATGATGAACCGCGTGGCTGCTGTGGCGAAGATTACGCCGAGGCAGTTTCTGGCTCAGCTGGGGAACAAGCAAAGGGCCATTGCGAAGCCTTGCGATGTGTTCATAAATCATAGAGGCGTCGACACGAAGAAGACGGTGGCGGCGCTGCTCTACGACAGGCTTGTCCGGGTGAACCTGCGCCCCTTCCTGGATTACAGGAATTTGAAGCCTGGAGAGAAGCTCTTCGATGAAATTCATGGCGCCATTCGCCAGTGTAAAGTTGCTGTCGCTGTCTTTTCGCCTCGCTATTGTGAGTCCTACTTTTGCCTTCATGAGTTGGCTATGATGATCGAGTCCAACAAGAAGGTCATTCCCATATTTTGTGATGTAAAACCATCTCAACTTCGCATAGAGGATCACGATGAATATGAAATAGATGAGCTAAGGAGGTTCAATTGGGCTCTCCAAGAAGCTAAACAGTTTGACGGACTCAAATTTAATTCCTCAAAAGAGACCTTATCAGAAGTTGTCACAAAGGCTTCAAATATTGTCATCAGGAGTTTGGCCGAGGCTCAGTTGGAGGAGGTGTTGCAGGAGGAAGTGGTATACTGGAAACAGAGGTCCAGGGAGTTATGGCTTCGAGAAGGGGATCGCAATACTCGGTGGTTCCACTGTCGAGCCTCTTACCGCCAGAAGCTTAATCGCATTGGAGGATTGGAGGATGATCAGGGAGTGTGGTAA ATGATGAACCGCGTGGCTGCTGTGGCGAAGATTACGCCGAGGCAGTTTCTGGCTCAGCTGGGGAACAAGCAAAGGGCCATTGCGAAGCCTTGCGATGTGTTCATAAATCATAGAGGCGTCGACACGAAGAAGACGGTGGCGGCGCTGCTCTACGACAGGCTTGTCCGGGTGAACCTGCGCCCCTTCCTGGATTACAGGAATTTGAAGCCTGGAGAGAAGCTCTTCGATGAAATTCATGGCGCCATTCGCCAGTGTAAAGTTGCTGTCGCTGTCTTTTCGCCTCGCTATTGTGAGTCCTACTTTTGCCTTCATGAGTTGGCTATGATGATCGAGTCCAACAAGAAGGTCATTCCCATATTTTGTGATGTAAAACCATCTCAACTTCGCATAGAGGATCACGATGAATATGAAATAGATGAGCTAAGGAGGTTCAATTGGGCTCTCCAAGAAGCTAAACAGTTTGACGGACTCAAATTTAATTCCTCAAAAGAGACCTTATCAGAAGTTGTCACAAAGGCTTCAAATATTGTCATCAGGAGTTTGGCCGAGGCTCAGTTGGAGGAGGTGTTGCAGGAGGAAGTGGTATACTGGAAACAGAGGTCCAGGGAGTTATGGCTTCGAGAAGGGGATCGCAATACTCGGTGGTTCCACTGTCGAGCCTCTTACCGCCAGAAGCTTAATCGCATTGGAGGATTGGAGGATGATCAGGGAGTGTGGTAA MMNRVAAVAKITPRQFLAQLGNKQRAIAKPCDVFINHRGVDTKKTVAALLYDRLVRVNLRPFLDYRNLKPGEKLFDEIHGAIRQCKVAVAVFSPRYCESYFCLHELAMMIESNKKVIPIFCDVKPSQLRIEDHDEYEIDELRRFNWALQEAKQFDGLKFNSSKETLSEVVTKASNIVIRSLAEAQLEEVLQEEVVYWKQRSRELWLREGDRNTRWFHCRASYRQKLNRIGGLEDDQGVW Homology
BLAST of Lag0018798.1 vs. NCBI nr
Match: KAG7027684.1 (Toll/interleukin-1 receptor-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 322.8 bits (826), Expect = 2.5e-84 Identity = 155/182 (85.16%), Postives = 169/182 (92.86%), Query Frame = 0
BLAST of Lag0018798.1 vs. NCBI nr
Match: KAG6577380.1 (TIR-only protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 319.3 bits (817), Expect = 2.8e-83 Identity = 154/182 (84.62%), Postives = 168/182 (92.31%), Query Frame = 0
BLAST of Lag0018798.1 vs. NCBI nr
Match: XP_022984910.1 (TIR domain-containing protein-like [Cucurbita maxima]) HSP 1 Score: 318.9 bits (816), Expect = 3.6e-83 Identity = 153/181 (84.53%), Postives = 167/181 (92.27%), Query Frame = 0
BLAST of Lag0018798.1 vs. NCBI nr
Match: XP_023002843.1 (TMV resistance protein N-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 313.5 bits (802), Expect = 1.5e-81 Identity = 153/184 (83.15%), Postives = 169/184 (91.85%), Query Frame = 0
BLAST of Lag0018798.1 vs. NCBI nr
Match: XP_022942870.1 (TMV resistance protein N-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 313.5 bits (802), Expect = 1.5e-81 Identity = 154/184 (83.70%), Postives = 169/184 (91.85%), Query Frame = 0
BLAST of Lag0018798.1 vs. ExPASy Swiss-Prot
Match: I1GTC2 (TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.8e-37 Identity = 80/168 (47.62%), Postives = 119/168 (70.83%), Query Frame = 0
BLAST of Lag0018798.1 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.5e-15 Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 0
BLAST of Lag0018798.1 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13 Identity = 52/163 (31.90%), Postives = 87/163 (53.37%), Query Frame = 0
BLAST of Lag0018798.1 vs. ExPASy Swiss-Prot
Match: Q9SSN3 (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-11 Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 0
BLAST of Lag0018798.1 vs. ExPASy Swiss-Prot
Match: F4JNB7 (Disease resistance protein RPP5 OS=Arabidopsis thaliana OX=3702 GN=RPP5 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.8e-09 Identity = 33/102 (32.35%), Postives = 58/102 (56.86%), Query Frame = 0
BLAST of Lag0018798.1 vs. ExPASy TrEMBL
Match: A0A6J1J9V9 (TIR domain-containing protein-like OS=Cucurbita maxima OX=3661 GN=LOC111483045 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.8e-83 Identity = 153/181 (84.53%), Postives = 167/181 (92.27%), Query Frame = 0
BLAST of Lag0018798.1 vs. ExPASy TrEMBL
Match: A0A6J1KUS0 (TMV resistance protein N-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496557 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 7.4e-82 Identity = 153/184 (83.15%), Postives = 169/184 (91.85%), Query Frame = 0
BLAST of Lag0018798.1 vs. ExPASy TrEMBL
Match: A0A6J1FX23 (TMV resistance protein N-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447771 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 7.4e-82 Identity = 154/184 (83.70%), Postives = 169/184 (91.85%), Query Frame = 0
BLAST of Lag0018798.1 vs. ExPASy TrEMBL
Match: A0A6J1ERQ8 (TIR domain-containing protein-like OS=Cucurbita moschata OX=3662 GN=LOC111435930 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 3.7e-81 Identity = 150/178 (84.27%), Postives = 164/178 (92.13%), Query Frame = 0
BLAST of Lag0018798.1 vs. ExPASy TrEMBL
Match: A0A6J1CP46 (disease resistance protein LAZ5 OS=Momordica charantia OX=3673 GN=LOC111012886 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 2.0e-79 Identity = 158/186 (84.95%), Postives = 165/186 (88.71%), Query Frame = 0
BLAST of Lag0018798.1 vs. TAIR 10
Match: AT1G52900.1 (Toll-Interleukin-Resistance (TIR) domain family protein ) HSP 1 Score: 193.7 bits (491), Expect = 1.6e-49 Identity = 95/158 (60.13%), Postives = 119/158 (75.32%), Query Frame = 0
BLAST of Lag0018798.1 vs. TAIR 10
Match: AT1G61105.1 (Toll-Interleukin-Resistance (TIR) domain family protein ) HSP 1 Score: 182.2 bits (461), Expect = 5.0e-46 Identity = 87/166 (52.41%), Postives = 117/166 (70.48%), Query Frame = 0
BLAST of Lag0018798.1 vs. TAIR 10
Match: AT1G17615.1 (Disease resistance protein (TIR-NBS class) ) HSP 1 Score: 79.3 bits (194), Expect = 4.5e-15 Identity = 38/102 (37.25%), Postives = 62/102 (60.78%), Query Frame = 0
BLAST of Lag0018798.1 vs. TAIR 10
Match: AT4G09430.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14 Identity = 48/162 (29.63%), Postives = 87/162 (53.70%), Query Frame = 0
BLAST of Lag0018798.1 vs. TAIR 10
Match: AT1G72920.1 (Toll-Interleukin-Resistance (TIR) domain family protein ) HSP 1 Score: 76.6 bits (187), Expect = 2.9e-14 Identity = 51/167 (30.54%), Postives = 85/167 (50.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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