Lag0015475.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACGGAGGTTCTATTAGGGATGGAGGCCGAGTTACACGACATGCACAAGTTGTTACGAAAGCTTGCTAAGGTATCATTTGATTACATGTGTTCTTTTTATTTCTTATGTTTTTTTTCACGACAATTAATGAGTGTGTTATATACAGGATAAAGGTGTAGACCCGACTAAGTATATTGGACCTGACGATGATGTCGATTATGGGGGTCCACCCACCAAAAAACATGACGACGCCACCCGGGAGCGTTACGCCGAGGACAACATACCTAGTAGTGGGAAGGGGGTTGGTGATGAAGACAAGGGTCCACCCACCAAAAACATGATGACGTGACCGGGGAACGTGACGCTAATGACGACATAGGAATCAATGGGAAGGGGGTGACGTCATGATACCTAAATCGAAGGTAAGTCATCTTTGAGTTTCTAAATTATGTAGTTTAAGGCGTAGATGATGATATTTATCTTACTGTGTAGCTTATTGAGTTTGAGGACAGGGAGGACAAAGTGGACGTAACGGGACTGGACGAACCCTTCGTGCGTCGTGGAAAGTGTGTTCGTCAAATATCTTGGAAACTACGATCTCCATGGACTGAAATCAGACCTGATGGTAAATGAAAGAATCCGAAGAGGTATGACCTTATGCGTTCCATCCCAGATGAGTTTGAACAATCATTTCGGAACTGGTTGGATGACCCGACATCCGACGAATTAGAGTGAAAGGTCGTGTATTCATACAGGAACAAGTTCTGGTTTAAAATTTTGATAAGTTCGTCATATTGGACGAGCGATGAGGTACACTAAAACCCATTACATGCTATTTTCATGCATGCATGTAAACACTAAATAGTGGAGATTGTTCCAGGTAATTGACTCTCTTTTCATGTTCATCTGTAAGAAGATGGACAAATCGTCCCGACTTATGTCGTTGGAGGTTCGTTATTGTGACATAGTTGTTACGGTACGATGTTTGTATGTTTTTTTATTATTCAAAATACAGTTTAGGGTTTATGGTTTGTTATTTGTTATGATGATCTTCTTTTCATTTCGTTTTGCTTTGTAGGAGTTCTTAAGGCGATGGGACGTATATGAACAACTTGTAGGAGGCAACCCTGAGTCCTTCGACTGGAGTAGGTTCAAGTCCGTCCTCAAATATGTTCGGGGCGAGCACACGAATTATAATGTTCCATGGAGTACGGTAGATGTCATGTACATGCCTTTCCTCCTAGGAAGAGAACACTAGGTTTTGTTATGTGCGGACCTGAAGGTAGGTGAGGTGGCCGTCACAGATTCACTAGTGGCTCTTACGTCCGACATCGAGTTGGAGAAGGAAATGAATATAGTATGCACCATCCTTCCATGGCTTCTAGAAGCAGGTGGTGTCATGGAGGTGAAATCGTCACTACCACGCACTACATGGACATTCAAGAGGAGGATTGGAGTTCCCCAGCAGGTAGATAATGGAGATTGTGAGATCTCCGCTGCAAAATTCCTCGAGTATGATGTAAATGGGGTGGACATGGGTTCTCTTAGTGAGGATAGGATGAATTTTTGTAGACGAAAGTATGTTGTGCAACTATGGTGTAACACGCCATTTTTTTAG ATGTACGGAGGTTCTATTAGGGATGGAGGCCGAGTTACACGACATGCACAAGATAAAGGTGTAGACCCGACTAAGTATATTGGACCTGACGATGATGTCGATTATGGGGGTCCACCCACCAAAAAACATGACGACGCCACCCGGGAGCGTTACGCCGAGGACAACATACCTAGTAGTGGGAAGGGGCTTATTGAGTTTGAGGACAGGGAGGACAAAGTGGACGTAACGGGACTGGACGAACCCTTCGTGCGTCGTGGAAAGTGTGTAATTGACTCTCTTTTCATGTTCATCTGTAAGAAGATGGACAAATCGTCCCGACTTATGTCGTTGGAGGTTCGTTATTGTGACATAGTTGTTACGGAGTTCTTAAGGCGATGGGACGTATATGAACAACTTGTAGGAGGCAACCCTGAGTCCTTCGACTGGAGTAGGTTCAAGTCCGTCCTCAAATATGTTCGGGGCGAGCACACGAATTATAATGTTCCATGGAGTACGGTAGGTGAGGTGGCCGTCACAGATTCACTAGTGGCTCTTACGTCCGACATCGAGTTGGAGAAGGAAATGAATATAGTATGCACCATCCTTCCATGGCTTCTAGAAGCAGGTGGTGTCATGGAGGTGAAATCGTCACTACCACGCACTACATGGACATTCAAGAGGAGGATTGGAGTTCCCCAGCAGGTAGATAATGGAGATTGTGAGATCTCCGCTGCAAAATTCCTCGAGTATGATGTAAATGGGGTGGACATGGGTTCTCTTAGTGAGGATAGGATGAATTTTTGTAGACGAAAGTATGTTGTGCAACTATGGTGTAACACGCCATTTTTTTAG ATGTACGGAGGTTCTATTAGGGATGGAGGCCGAGTTACACGACATGCACAAGATAAAGGTGTAGACCCGACTAAGTATATTGGACCTGACGATGATGTCGATTATGGGGGTCCACCCACCAAAAAACATGACGACGCCACCCGGGAGCGTTACGCCGAGGACAACATACCTAGTAGTGGGAAGGGGCTTATTGAGTTTGAGGACAGGGAGGACAAAGTGGACGTAACGGGACTGGACGAACCCTTCGTGCGTCGTGGAAAGTGTGTAATTGACTCTCTTTTCATGTTCATCTGTAAGAAGATGGACAAATCGTCCCGACTTATGTCGTTGGAGGTTCGTTATTGTGACATAGTTGTTACGGAGTTCTTAAGGCGATGGGACGTATATGAACAACTTGTAGGAGGCAACCCTGAGTCCTTCGACTGGAGTAGGTTCAAGTCCGTCCTCAAATATGTTCGGGGCGAGCACACGAATTATAATGTTCCATGGAGTACGGTAGGTGAGGTGGCCGTCACAGATTCACTAGTGGCTCTTACGTCCGACATCGAGTTGGAGAAGGAAATGAATATAGTATGCACCATCCTTCCATGGCTTCTAGAAGCAGGTGGTGTCATGGAGGTGAAATCGTCACTACCACGCACTACATGGACATTCAAGAGGAGGATTGGAGTTCCCCAGCAGGTAGATAATGGAGATTGTGAGATCTCCGCTGCAAAATTCCTCGAGTATGATGTAAATGGGGTGGACATGGGTTCTCTTAGTGAGGATAGGATGAATTTTTGTAGACGAAAGTATGTTGTGCAACTATGGTGTAACACGCCATTTTTTTAG MYGGSIRDGGRVTRHAQDKGVDPTKYIGPDDDVDYGGPPTKKHDDATRERYAEDNIPSSGKGLIEFEDREDKVDVTGLDEPFVRRGKCVIDSLFMFICKKMDKSSRLMSLEVRYCDIVVTEFLRRWDVYEQLVGGNPESFDWSRFKSVLKYVRGEHTNYNVPWSTVGEVAVTDSLVALTSDIELEKEMNIVCTILPWLLEAGGVMEVKSSLPRTTWTFKRRIGVPQQVDNGDCEISAAKFLEYDVNGVDMGSLSEDRMNFCRRKYVVQLWCNTPFF Homology
BLAST of Lag0015475.1 vs. NCBI nr
Match: XP_038882332.1 (uncharacterized protein LOC120073583 [Benincasa hispida]) HSP 1 Score: 122.9 bits (307), Expect = 4.4e-24 Identity = 66/170 (38.82%), Postives = 90/170 (52.94%), Query Frame = 0
BLAST of Lag0015475.1 vs. NCBI nr
Match: XP_022158807.1 (uncharacterized protein LOC111025273 [Momordica charantia]) HSP 1 Score: 121.7 bits (304), Expect = 9.9e-24 Identity = 67/214 (31.31%), Postives = 110/214 (51.40%), Query Frame = 0
BLAST of Lag0015475.1 vs. NCBI nr
Match: XP_038885861.1 (sentrin-specific protease [Benincasa hispida]) HSP 1 Score: 112.5 bits (280), Expect = 6.0e-21 Identity = 62/161 (38.51%), Postives = 85/161 (52.80%), Query Frame = 0
BLAST of Lag0015475.1 vs. NCBI nr
Match: XP_022154364.1 (uncharacterized protein LOC111021646 [Momordica charantia]) HSP 1 Score: 108.6 bits (270), Expect = 8.7e-20 Identity = 66/209 (31.58%), Postives = 99/209 (47.37%), Query Frame = 0
BLAST of Lag0015475.1 vs. NCBI nr
Match: XP_022153247.1 (uncharacterized protein LOC111020782 [Momordica charantia]) HSP 1 Score: 103.6 bits (257), Expect = 2.8e-18 Identity = 53/160 (33.12%), Postives = 81/160 (50.62%), Query Frame = 0
BLAST of Lag0015475.1 vs. ExPASy TrEMBL
Match: A0A6J1DLV0 (uncharacterized protein LOC111021646 OS=Momordica charantia OX=3673 GN=LOC111021646 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.2e-20 Identity = 66/209 (31.58%), Postives = 99/209 (47.37%), Query Frame = 0
BLAST of Lag0015475.1 vs. ExPASy TrEMBL
Match: A0A6J1DID7 (uncharacterized protein LOC111020782 OS=Momordica charantia OX=3673 GN=LOC111020782 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18 Identity = 53/160 (33.12%), Postives = 81/160 (50.62%), Query Frame = 0
BLAST of Lag0015475.1 vs. ExPASy TrEMBL
Match: A0A6J1D492 (uncharacterized protein LOC111016890 OS=Momordica charantia OX=3673 GN=LOC111016890 PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 4.3e-17 Identity = 52/150 (34.67%), Postives = 76/150 (50.67%), Query Frame = 0
BLAST of Lag0015475.1 vs. ExPASy TrEMBL
Match: A0A6J1CJT2 (uncharacterized protein LOC111012067 OS=Momordica charantia OX=3673 GN=LOC111012067 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 3.7e-16 Identity = 47/147 (31.97%), Postives = 73/147 (49.66%), Query Frame = 0
BLAST of Lag0015475.1 vs. ExPASy TrEMBL
Match: A0A6J1DQZ3 (uncharacterized protein LOC111023442 OS=Momordica charantia OX=3673 GN=LOC111023442 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 6.3e-16 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 0
BLAST of Lag0015475.1 vs. TAIR 10
Match: AT5G45570.1 (Ulp1 protease family protein ) HSP 1 Score: 50.4 bits (119), Expect = 2.6e-06 Identity = 30/103 (29.13%), Postives = 53/103 (51.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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