Lag0015474.1 (mRNA) Sponge gourd (AG‐4) v1

Overview
NameLag0015474.1
TypemRNA
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Locationchr12: 13798651 .. 13803067 (+)
Sequence length726
RNA-Seq ExpressionLag0015474.1
SyntenyLag0015474.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGTGAATGACCAAGAGGTGAAGTTTAGTGTCTTTGATGCCATAAAGTCCCCAACTGATATTGAAGAGTGTTCTGTCATTCAAGTGAAAGATAAGCTGGTTGATGATCAAGTTGAGAAGGAAATGAGAGAGCAACACATACAACAGTTGGGAAAAATTGGAATTGAGGATTTGGAATTAAACAAATTGGAGCTTGAACTTGAAAGTACTGTAGGTGAAGTTTTTGGTTTTAATAGGACTTTTGAATTCTTAGAGTTGATTGATAAGAAAAATCCACCTACAAAACCATTTAGTTCTTTGAAATTATTTCAGCAACCTAAGTTTGAAAATTATTTCCTTGATGAACAGTTTTTTACAGTAGCTTACACCAAAAAAATGAAAACACTATGGTATTTGACCTTACCAATTACCTTGCTTTTGGAACATTGCCCCATGATTTATCAAAGCAACAATTGAAAAAGTTTTTCCATGAGATAAAGTTTTATTTTTGGGATGATTCATTTGTGTTTAAACAATGTGTTGATAATGAAGGCAGGGAGTTTAAGGTAAATGAGCAAAGGTTGAAGCATCATTGGAGAGAAAATTTCCAAAGATTTCATGCCTCTTGCATTTTAGCTGAAAATTGAGTTGTGAGCTAGAAAGGGGCAGTGAGTTTAAAGTTCTATTTTTGTGAATGCCCAATGAGGTGGTTTTGAAAAAGTCGATTTCAATTTTTGTTATTTTTGCATTGTTCGTTGGTAGTTGATTTATTTTCAAATAGGTAATTTATAGCTTTATTTTGTTATTTTATTTTTGTCTAGCTTAATGCTTTAATTGTTTTGCTTAAGTTTTGGTTTTGTAGAAAATTTCAGCAATTTTTGGAAGAAATCAATGGTGTAGCAAGAAAAGTGGAGCATATTAGGCAGTTTAGGAAAGCTGTGATTTGATGGGAGAAATTTTCAGATTTGGCTATATTCAAGGGAGGAAGTTTTAAGTTTGCTTGTCTGCTGTCTATCATGCTTTCTGTTAGCTTTTGTTTGGAAGAAAAAGAAAATGTGTATGAATGAGAGTTCTATAGGTGTGCATGTTTTAATGTTCAAATCATTTGAATGCATATCAAATTTAGAAAATGTTATGGTGCAAAGGCTAAAGTAGTTGAAATATGCAAAATTTCTAGCATTCCTCAAAGTGTAATTTAAAAAGTGTATGTGGCTGAGTGTGTGTTTGCTAGTTGTACCCATGATCCAATGAAGTTTAATGAATTTATCTTTTATGGAGTTGTTGGAATATGCTTGAATGGTAAAAATTTGCAATTGGGCTATGGTCCTGTTTTATCTTATTGCAATTTGTTAGATGTTGTGATGAAGTGCCATTAATGCTTGAGAGGTGTCATGCTTGCTGAAAATACTATTTGAGTTCTAAGTAGTTACTTGGCGCATAATTGTAATGCTTGCTCATAAAGTGATCTGATGCTTATTTGCTACATTTAATGCAAAATTCTAAGATTGGTGAGCTACTGAATGCTTTGAGCTTATTTAGAAATCATTTTAGTTGAGAAATTGAATCATCCAGCTTGTTTAGAATTGGTTTAGGGCCTAGTTCTAGCTATTGGTTATTCTTTTGGTTAAGCCTAACCTTCCTTACTTGGTGAAAAGAAAAAAATCTGTTTTAATATGCAAACGTAGTGTTCTGTCAAATGATCCCCGAAAGCTTAGCTGATAAAGGAACTATCTCAATTATGTTTGAGAACTCTCCTTATTTCAGGTGAACCCCCACAACAATAATAAGAATAACCCTATTTAACGAAATGATAAACAACCCCAAGAAAGTTAAATAGATTTGGCTTGGAAGGATGATCAAAGATCAAGAAGAAAAGAGAACTCGTTCCTAACTTCAAGATTTCGAACTCTTCACAATCTAATTGATCAAACTAGATTGAAAATCCTAGGCATGCATTCTAAACACAAGAACAAAAAGAAAGCTTAAAAGCTTGAGAGAGACTAAACTCAATATGAAATTTCATTCAAATTCAATTTCCACTTGTTGTTCCAATGACAAATTACATCCATATTTATACTAATTGAAAAGACACCATGAAAGGATACAACCCTTCATCTATGTAGTCTAGATTCAACCCCAACCTTTCAAATCCATACATGAACCATCATAAATCCAGATACATGAATTAAATAGGTACATAATGCATTAAATATGATGAATGAATCTAGATTTTTAGACTCATTGTGCCTCTTGGTTGAAAGGATGCTTTTGTTAAGCTTGAAAGGATGCAACTTTTCACCATAGTAATTGATTGAGTTGGTTCATCACTTATTTCCTTATCATTAGCCTATTGTTTAGTTAGATTATCTTATTGTGCTTTAAGTCATTAGGTAGATGGGAAGCTGTTTCCAATACTGCAAGTGCACGGGTCGCAAGTAATATAAAACGAAAATATTTCGAGTATCGAATCCACAGGGAGGCGAAGCGAAAATTAAGAAAAGCTAAAATTCCTTGAACACTAAAGATACTTGGGGGAAATAATATTTAGGGACCAAAACATGCAGTTAAAATGATTTTCAAACTTAAAACAATTAAAGAGTAAAATTTGATCAATCAAGAAATAAAAAATATGGAGAAAGAGCTTTTTAAATGGGAAGTGGGGTCTTGAAACTCAATTAATAGTTAAATAATTATTACAATTATCCTATCTCGCTGCCCAACTAATTATAATCCTAGAATCTCCGTTAGTCACATAGGATCACATGTCGGTCTCCCCTAATTGCAATTAAACCATTTTAACAACCTAAGTGTCCTTAGCGCCATTAAAATTCATTAATTATTACGCTCTGATTCATTTTAGGAATCTAAGTTTAATCAACTAATCTCGTTGTCACGACGGGCAATTAAACTAGTTGCATGGATTATGATCTATCCTAATTTCTCTCCGTCGAGTCTCCATTAAGAATCGGATCAATACACAATTGGCAAGATTGCATAAGGAGGGGTTAAATGGGAGTTTAATCGCCTTAATCTATGGAGAATTGGAAAATTCCCATGAGTAATCTGAGTGAGATGAAATTAGCACATGTTTAGCTACAACAATCACTGGAAGCAGTATAGAAAATCCCAAATTCGAACCTCTCTTCTCTCTTGCGTCCGACCGTTTTTCTTGCTTCATTTACTTTGTGTTATCTTTAGTTTCTCTAAAATTTGTTTACATTTGTGCAATTTAGTTAGTGAATAATATTTTGTCGTCGGTTACTTTGAATTTCATCAAAAAGTCAAGCTTAGAAATAGTAAAATTCCTTAATTCAATCCCCGTGGAGAATGATCTTAAATTACTTATCACTTGATGCCATGATGTGTATACTTGCACGTTTTTGAGTTATTTGATGCATATTTAGCTTCACTTTGCTCAAGGCAACAATATACAAGTTGGGGATGTATTCATGTGAAAAAAAACCTGTCCATGAGATTATTTGTTCTAGTGATGAGGAGAAACTTCGAGTTTAGGGTTAAGAAGTCCAAAAAAGATATATACTTAGTTGTCTGTCGCACTGATGAATGTAAATGGAAACTTCGAGCCATGAGATTGAAAGGGTGTGATGTTCTTAAAGTTTCAAACTATTGCAACATTCATACATGCCGACATTTAATGTTAAGTCACAGCCATAGATAAGCTACAAGTTCGGTTCTTGTTCAATATATGAAGTCGAAACTTCAGGATGTTGATACTACGTATAGTTGAAAGACATTATACGGGATATTCGACAGGACTTGGGTGTGAACATGAGTTATGATAGAGCATGACAAGCGAGAGAAGAAGCATTAAAGCTTGTTCGTGAGTCACCAAAAGAGTCGTACAAACTTTTACCGAGGTTTGGTGAAGCATTAAAGATTGAGAATCCAGGTTCAATGTTTGAGTTTGAACTTGAAGAATAAATATTTCAAATCGTGTTTTATGGCCTTAGATGCATCCATCAGGGGATTTAGGAGTTGCATTCGCCTAGTTCTAGTGGTTGATGGAGCTCACCTACGAGGAAAATACAATGGCAAAATGTTACTTGCAACCGGTGTGGATAGTAATAATCATATATACCCAATTGGGTTTGGAATAGCCGATGGGAAGACCGATGAATCTTGGAGTTATTTTTTCCGACACATGGAACGCACAATTGGACAACTTCTTAATCTAGTAATAGTTTCTAACAGACACCCTAACATTCGAAAGGGAATAAGAACGGTGTTTCCTAATGCATTTCACGACATATGCATGCAACATTTGGAAGAAAATTTGAGGAAAAAATTTAAGAAAGAAAACATTGTACCAATTTTCAAACTTATTGCAAAAGCATTTCGTGATTGCAAGTTTAATGAAGGCTATAAAGACGAAGTCAATAGTGGACGACTAACAATGACTAGAATATTGGGTTGA

mRNA sequence

ATGAGGGTGAATGACCAAGAGGTGAAGTTTAGTGTCTTTGATGCCATAAAGTCCCCAACTGATATTGAAGAGTGTTCTGTCATTCAAGTGAAAGATAAGCTGGTTGATGATCAAGTTGAGAAGGAAATGAGAGAGCAACACATACAACAGTTGGGAAAAATTGGAATTGAGGATTTGGAATTAAACAAATTGGAGCTTGAACTTGAAAGTACTGTAGGTAGATGGGAAGCTGTTTCCAATACTGCAAGTGCACGGGTCGCAAATGCATCCATCAGGGGATTTAGGAGTTGCATTCGCCTAGTTCTAGTGGTTGATGGAGCTCACCTACGAGGAAAATACAATGGCAAAATGTTACTTGCAACCGGTGTGGATAGTAATAATCATATATACCCAATTGGGTTTGGAATAGCCGATGGGAAGACCGATGAATCTTGGAGTTATTTTTTCCGACACATGGAACGCACAATTGGACAACTTCTTAATCTAGTAATAGTTTCTAACAGACACCCTAACATTCGAAAGGGAATAAGAACGGTGTTTCCTAATGCATTTCACGACATATGCATGCAACATTTGGAAGAAAATTTGAGGAAAAAATTTAAGAAAGAAAACATTGTACCAATTTTCAAACTTATTGCAAAAGCATTTCGTGATTGCAAGTTTAATGAAGGCTATAAAGACGAAGTCAATAGTGGACGACTAACAATGACTAGAATATTGGGTTGA

Coding sequence (CDS)

ATGAGGGTGAATGACCAAGAGGTGAAGTTTAGTGTCTTTGATGCCATAAAGTCCCCAACTGATATTGAAGAGTGTTCTGTCATTCAAGTGAAAGATAAGCTGGTTGATGATCAAGTTGAGAAGGAAATGAGAGAGCAACACATACAACAGTTGGGAAAAATTGGAATTGAGGATTTGGAATTAAACAAATTGGAGCTTGAACTTGAAAGTACTGTAGGTAGATGGGAAGCTGTTTCCAATACTGCAAGTGCACGGGTCGCAAATGCATCCATCAGGGGATTTAGGAGTTGCATTCGCCTAGTTCTAGTGGTTGATGGAGCTCACCTACGAGGAAAATACAATGGCAAAATGTTACTTGCAACCGGTGTGGATAGTAATAATCATATATACCCAATTGGGTTTGGAATAGCCGATGGGAAGACCGATGAATCTTGGAGTTATTTTTTCCGACACATGGAACGCACAATTGGACAACTTCTTAATCTAGTAATAGTTTCTAACAGACACCCTAACATTCGAAAGGGAATAAGAACGGTGTTTCCTAATGCATTTCACGACATATGCATGCAACATTTGGAAGAAAATTTGAGGAAAAAATTTAAGAAAGAAAACATTGTACCAATTTTCAAACTTATTGCAAAAGCATTTCGTGATTGCAAGTTTAATGAAGGCTATAAAGACGAAGTCAATAGTGGACGACTAACAATGACTAGAATATTGGGTTGA

Protein sequence

MRVNDQEVKFSVFDAIKSPTDIEECSVIQVKDKLVDDQVEKEMREQHIQQLGKIGIEDLELNKLELELESTVGRWEAVSNTASARVANASIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFKKENIVPIFKLIAKAFRDCKFNEGYKDEVNSGRLTMTRILG
Homology
BLAST of Lag0015474.1 vs. NCBI nr
Match: XP_038882416.1 (protein FAR1-RELATED SEQUENCE 8-like [Benincasa hispida])

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-36
Identity = 78/134 (58.21%), Postives = 102/134 (76.12%), Query Frame = 0

Query: 88  NASIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSY 147
           NASIRGF +CIR +L+V G HLRGKY+GK+LLATGVD NN IYP+ FGI+ G+T+ESW +
Sbjct: 180 NASIRGFLNCIRPILIVGGTHLRGKYSGKLLLATGVDGNNQIYPVTFGISSGETNESWVW 239

Query: 148 FFRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFKKENIVP 207
           F + +   IGQ+ ++VIVS+RHP+I+K I TVFP AFH IC+ HL+ NL   FK ++I+ 
Sbjct: 240 FLQQLICAIGQVHDVVIVSDRHPSIKKVIITVFPEAFHGICIHHLKANLLVNFKNKDILD 299

Query: 208 IFKLIAKAFRDCKF 222
           IF   AKA R+  F
Sbjct: 300 IFDKAAKASREFVF 313

BLAST of Lag0015474.1 vs. NCBI nr
Match: XP_038885923.1 (uncharacterized protein LOC120076231 [Benincasa hispida])

HSP 1 Score: 151.8 bits (382), Expect = 7.8e-33
Identity = 74/133 (55.64%), Postives = 96/133 (72.18%), Query Frame = 0

Query: 89  ASIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYF 148
           A+IRGF +CIR VL+VD  HLR KY+GK+LLAT VD NN IY + F I+ G+TDESW +F
Sbjct: 5   ATIRGFLNCIRPVLIVDVTHLRDKYSGKLLLATRVDGNNQIYQVAFDISSGETDESWVWF 64

Query: 149 FRHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFKKENIVPI 208
            + +   IGQ+ +LVIVS+RHP+I+K I TVFP AF+ IC+ HL+ NL   FK ++I  I
Sbjct: 65  LQQLRCAIGQVHDLVIVSDRHPSIKKAIITVFPEAFYGICIHHLKANLLVNFKNKDIFDI 124

Query: 209 FKLIAKAFRDCKF 222
           F   AKA R+  F
Sbjct: 125 FDKSAKASRESVF 137

BLAST of Lag0015474.1 vs. NCBI nr
Match: XP_038884809.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Benincasa hispida])

HSP 1 Score: 151.4 bits (381), Expect = 1.0e-32
Identity = 68/131 (51.91%), Postives = 92/131 (70.23%), Query Frame = 0

Query: 91  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFR 150
           IRGF +CIR V+VVDG H   KY G +L+ T +D NN+IYPI F I D + D SW++F  
Sbjct: 123 IRGFLNCIRPVIVVDGTHFHEKYKGMLLITTCIDGNNNIYPIAFSIVDCENDASWTWFMT 182

Query: 151 HMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFKKENIVPIFK 210
           H++ +IG + NLVI+SNRH +I K I  +FP+AFH +C+ H+  NL  KFK E+I+P F 
Sbjct: 183 HLKASIGDVSNLVIISNRHISIAKAIARIFPSAFHALCIYHIRNNLLDKFKNEDIIPHFY 242

Query: 211 LIAKAFRDCKF 222
           L AKA+R  +F
Sbjct: 243 LAAKAYRISEF 253

BLAST of Lag0015474.1 vs. NCBI nr
Match: XP_038887218.1 (uncharacterized protein LOC120077407 [Benincasa hispida])

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-32
Identity = 68/132 (51.52%), Postives = 94/132 (71.21%), Query Frame = 0

Query: 91  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFR 150
           IRGF +CIR V+VVDG HL  KY G +L+AT +D NN+IYPI F I D + D SW+ F  
Sbjct: 37  IRGFLNCIRPVVVVDGTHLHEKYKGMLLIATCIDGNNNIYPIAFSIVDVENDASWTRFMT 96

Query: 151 HMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFKKENIVPIFK 210
           H++ +IG + NLVI+S+RH +I K +  +FP+AFH +C+  +  NL  KFK +NI+P F 
Sbjct: 97  HLKASIGDIPNLVIISDRHISIVKAVARIFPDAFHALCIYRIRNNLLDKFKNKNIIPHFY 156

Query: 211 LIAKAFRDCKFN 223
           L+AKA+R  KF+
Sbjct: 157 LLAKAYRMSKFH 168

BLAST of Lag0015474.1 vs. NCBI nr
Match: XP_022154930.1 (uncharacterized protein LOC111022077 [Momordica charantia])

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-32
Identity = 71/131 (54.20%), Postives = 92/131 (70.23%), Query Frame = 0

Query: 91  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFR 150
           IRGF SCIR VLV+DGAHL+GKY G +L A+ VD NN IYPI FGI D +++ SWS+F  
Sbjct: 308 IRGFSSCIRPVLVIDGAHLKGKYKGVILTASSVDGNNQIYPIAFGIVDIESBASWSWFLE 367

Query: 151 HMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFKKENIVPIFK 210
            ++  IG++  L+ VS+RH +I K +R VFP A H ICM HL  NL+ KFK ++I  +F 
Sbjct: 368 RLKHCIGEVDGLLFVSDRHVSITKSVREVFPEAAHGICMHHLSMNLKDKFKNDDIQGMFI 427

Query: 211 LIAKAFRDCKF 222
           L AKAF+   F
Sbjct: 428 LAAKAFQKSVF 438

BLAST of Lag0015474.1 vs. ExPASy TrEMBL
Match: A0A6J1DL12 (uncharacterized protein LOC111022077 OS=Momordica charantia OX=3673 GN=LOC111022077 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.4e-33
Identity = 72/131 (54.96%), Postives = 92/131 (70.23%), Query Frame = 0

Query: 91  IRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFFR 150
           IRGF SCIR VLV+DGAHL+GKY G +L A+ VD NN IYPI FGI D ++D SWS+F  
Sbjct: 308 IRGFSSCIRPVLVIDGAHLKGKYKGVILTASSVDGNNQIYPIAFGIVDIESDASWSWFLE 367

Query: 151 HMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFKKENIVPIFK 210
            ++  IG++  L+ VS+RH +I K +R VFP A H ICM HL  NL+ KFK ++I  +F 
Sbjct: 368 RLKHCIGEVDGLLFVSDRHVSITKSVREVFPEAAHGICMHHLSMNLKDKFKNDDIQGMFI 427

Query: 211 LIAKAFRDCKF 222
           L AKAF+   F
Sbjct: 428 LAAKAFQKSVF 438

BLAST of Lag0015474.1 vs. ExPASy TrEMBL
Match: A0A6J1D1Z5 (protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Momordica charantia OX=3673 GN=LOC111016624 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.1e-31
Identity = 68/132 (51.52%), Postives = 89/132 (67.42%), Query Frame = 0

Query: 90  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFF 149
           SIRGF SCIR +LVVDGAHL+GKY G +L A+ +D NN IYP+ FG+ D + D+SW++F 
Sbjct: 72  SIRGFGSCIRPILVVDGAHLKGKYKGVLLTASSIDGNNQIYPLAFGVVDKECDDSWTWFI 131

Query: 150 RHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFKKENIVPIF 209
             ++  IG +  LV VS+RH +I   + TVFPNA H  CM HL   L +KF+ E +  IF
Sbjct: 132 ERVKICIGDINGLVFVSDRHQSITNSVATVFPNAAHVTCMHHLTMKLNEKFRNEGMQIIF 191

Query: 210 KLIAKAFRDCKF 222
              AKAF+  KF
Sbjct: 192 AKAAKAFKVSKF 203

BLAST of Lag0015474.1 vs. ExPASy TrEMBL
Match: A0A6J1D278 (uncharacterized protein LOC111016623 OS=Momordica charantia OX=3673 GN=LOC111016623 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-31
Identity = 67/132 (50.76%), Postives = 90/132 (68.18%), Query Frame = 0

Query: 90  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFF 149
           SIRGFRSCIR VLV+DGAHL+GKY G +L+A+ VD NN IYP+ FGI D ++D SW++F 
Sbjct: 108 SIRGFRSCIRSVLVIDGAHLKGKYKGVILIASSVDGNNQIYPVAFGIVDKESDNSWTWFL 167

Query: 150 RHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFKKENIVPIF 209
             ++  IG++  LV VS+RH  I   +  VFPNA H  CM H++ NL  KFK E +  ++
Sbjct: 168 DQVKSAIGEVDGLVFVSDRHQAINNSVANVFPNAEHVSCMHHIKMNLNDKFKNEGMQMLY 227

Query: 210 KLIAKAFRDCKF 222
              A+AF+   F
Sbjct: 228 LQAAQAFKKSTF 239

BLAST of Lag0015474.1 vs. ExPASy TrEMBL
Match: A0A6J1DJT1 (uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020715 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.9e-30
Identity = 71/135 (52.59%), Postives = 92/135 (68.15%), Query Frame = 0

Query: 90  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFF 149
           SIRGF +CIR VLVVDGAHL+GK+ G +L+A+G D+NN IYP+ F I DG+T  SW +F 
Sbjct: 255 SIRGFLACIRPVLVVDGAHLKGKFIGVLLIASGADANNQIYPVAFAIVDGETVASWVWFM 314

Query: 150 RHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFK--KENIVP 209
             ++ T G + NLV VSNRH  I K I  VFP AFH  C+QH++ NL  KFK   + +  
Sbjct: 315 TQLKGTPGVVNNLVFVSNRHHTICKAIDKVFPTAFHCFCIQHIKMNLLAKFKVDAKALEE 374

Query: 210 IFKLIAKAFRDCKFN 223
           +F   AKA+R+  FN
Sbjct: 375 LFLKAAKAYRESYFN 389

BLAST of Lag0015474.1 vs. ExPASy TrEMBL
Match: A0A6J1CQH9 (protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111013823 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 8.7e-30
Identity = 69/135 (51.11%), Postives = 91/135 (67.41%), Query Frame = 0

Query: 90  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFF 149
           SIRGF +CIR VLVVDGAHL+GK+ G +L+A+G D NN IYP+ F I DG+T  SW +F 
Sbjct: 6   SIRGFLACIRPVLVVDGAHLKGKFRGVLLIASGADENNQIYPVAFAIVDGETVASWVWFM 65

Query: 150 RHMERTIGQLLNLVIVSNRHPNIRKGIRTVFPNAFHDICMQHLEENLRKKFK--KENIVP 209
             ++  +G + NLV VS+RH  I K I  VFP AFH  C+QH++ NL  KFK   + +  
Sbjct: 66  TQLKGALGVVNNLVFVSDRHHTICKAIDKVFPTAFHCFCIQHIKMNLLAKFKVDAKALEE 125

Query: 210 IFKLIAKAFRDCKFN 223
           +F   AKA+R+  FN
Sbjct: 126 LFLKAAKAYRESYFN 140

BLAST of Lag0015474.1 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-12
Identity = 38/121 (31.40%), Postives = 62/121 (51.24%), Query Frame = 0

Query: 90  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFF 149
           SI GF+ C R ++VVD   L GKY  K+++A+GVD+ N  +P+ F +    + +SW +FF
Sbjct: 368 SIEGFQHC-RPLIVVDTKSLNGKYQLKLMIASGVDAANKFFPLAFAVTKEVSTDSWRWFF 427

Query: 150 RHMERTIGQLLNLVIVSNRHPNI-----RKGIRTVFPNAFHDICMQHLEENLRKKFKKEN 206
             +   + Q  +L ++S+   +I       G     P A H  C+ HL       F+  N
Sbjct: 428 TKIREKVTQRKDLCLISSPLRDIVAVVNEPGSLWQEPWAHHKFCLNHLRSQFLGVFRDYN 487

BLAST of Lag0015474.1 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 66.6 bits (161), Expect = 3.1e-11
Identity = 33/108 (30.56%), Postives = 59/108 (54.63%), Query Frame = 0

Query: 90  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFF 149
           SI+GF+ C R ++VVD  +L GKY  K+++A+  D+ N  +P+ F +    + +SW +F 
Sbjct: 371 SIQGFQHC-RPLIVVDTKNLGGKYKMKLMIASAFDATNQYFPLAFAVTKEVSVDSWRWFL 430

Query: 150 RHMERTIGQLLNLVIVSNRHPNI-----RKGIRTVFPNAFHDICMQHL 193
             +   + Q   + ++S+  P+I       G +   P A+H  C+ HL
Sbjct: 431 TRIREKVTQRQGICLISSPDPDILAVINEPGSQWKEPWAYHRFCLYHL 477

BLAST of Lag0015474.1 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10
Identity = 33/116 (28.45%), Postives = 59/116 (50.86%), Query Frame = 0

Query: 90  SIRGFRSCIRLVLVVDGAHLRGKYNGKMLLATGVDSNNHIYPIGFGIADGKTDESWSYFF 149
           SI GF+ C R ++VVD  +L  +Y  K+++A+GVD+ N  +P+ F +    + + W +F 
Sbjct: 375 SIEGFQHC-RPLIVVDTKNLNCEYQLKLMIASGVDAANKYFPLAFAVTKEVSTDIWRWFL 434

Query: 150 RHMERTIGQLLNLVIVSNRHPNI-----RKGIRTVFPNAFHDICMQHLEENLRKKF 201
             +   + Q   L ++S+ HP+I       G +   P A+H   + H      + F
Sbjct: 435 TGIREKVTQRKGLCLISSPHPDIIAVVNESGSQWQEPWAYHRFSLNHFYSQFSRVF 489

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882416.11.5e-3658.21protein FAR1-RELATED SEQUENCE 8-like [Benincasa hispida][more]
XP_038885923.17.8e-3355.64uncharacterized protein LOC120076231 [Benincasa hispida][more]
XP_038884809.11.0e-3251.91protein FAR-RED ELONGATED HYPOCOTYL 3-like [Benincasa hispida][more]
XP_038887218.12.3e-3251.52uncharacterized protein LOC120077407 [Benincasa hispida][more]
XP_022154930.12.3e-3254.20uncharacterized protein LOC111022077 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DL126.4e-3354.96uncharacterized protein LOC111022077 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1D1Z52.1e-3151.52protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1D2782.7e-3150.76uncharacterized protein LOC111016623 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1DJT13.9e-3052.59uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1CQH98.7e-3051.11protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111013... [more]
Match NameE-valueIdentityDescription
AT1G64260.14.7e-1231.40MuDR family transposase [more]
AT1G49920.13.1e-1130.56MuDR family transposase [more]
AT1G64255.13.4e-1028.45MuDR family transposase [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 101..195
e-value: 5.5E-18
score: 65.2
NoneNo IPR availablePANTHERPTHR31973:SF135SUBFAMILY NOT NAMEDcoord: 89..223
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 89..223

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lag0015474Lag0015474gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lag0015474.1.exon1Lag0015474.1.exon1exon
Lag0015474.1.exon2Lag0015474.1.exon2exon
Lag0015474.1.exon3Lag0015474.1.exon3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Lag0015474.1cds.Lag0015474.1CDS
cds.Lag0015474.1cds.Lag0015474.1_2CDS
cds.Lag0015474.1cds.Lag0015474.1_3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lag0015474.1Lag0015474.1-proteinpolypeptide