Lag0012076.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGGCGATCTACGCTTTGAGATCTCTCAGAATGCCTACATAAAGCTCGTTCTCCATGCCCTAAAGCACCGGACCTCCGCCGTCAACGGAGTCCTCCTAGGTCGTAACTCCGGCCCCAATGATGTCGTCGAAATTGCCGATTCCGTCCCTCTCTTCCACTCAAGCATCGGTCTCCTCCCTCAGCTCGAGATATCTCTCCTTCTGGTACTCCTTTTGAACCATTTTGCAGCGAAATTTTTTGTTTAGATTTCTGTGGACTGGTGGCTCATGTGAGAATTTGTTTTGTTTGACACCGTTTTTACTGCCTTTTTACTTGCGTATTGGAGATCTGTGATTGATGAGCATGCTTGATTTGGAATCAGATTGAAGAATATTATGCGGCTAAGGGATTGAGTATCGTGGGATATTTTCATGCTAATGAGCGGTTTGATGACTATGAGGTCGGCGGTGTCGCCAAGAATATTGGTGATCATATCTCTCGATCATTTCCTCACGCTGCTCTTCTTTTGGTAAGATATGTCTTATTGTACTTAAACTGTATTGTTTTGTATATTTCTGTTGTTTGATTTATCCTCCTCTGCAGTTAGATCACAGAAAGCTTGAAGCTTTGCCAAAGAGAAAGGATAGGAGCCCTGTAATGGAGGTGAGTTTTTGGCTATAGAATTCTTTTCATGGTTTGTAAATTGTATTTGTGCGCTTCATTAGAATTTCCACCATACTTTCCTCTTTTAATTCTGTTTCAAAATAATTTAAACGAGCAATTTTATATCGCAAAAATGAAAAATTTAAATATTGTTGGTTGATATGGCGTTCAATGGGACCAACTACTTTGTTCAGTTTTTGAAGGACAGTGGAACATAGGAATATGAAGCAAATGTCAAATTGGGATAGCTTTTTGTAATCTCTCAGGACTTACCATATCTTTTTGTAAATTTCATACATCAATGAAATTGTTTCTTATCCAAAAAAAAGAAAAAAGAAAAAAGGACAGTGAAACATGGTAAAAATAACTTTGTTACATCATTGATGATTCATTCATTTCTTGGGGGGACGTTCTTATAGTTTTCCCAATTACTAGATATGACACAATGCTAAAATGTCACGAGAAGGCTTTATTTTAATTCTATTGGAGTCTTTTGACAATCTCTTGATTATCTTCCATTGGTGGAGACTTGATATCATTAACTACTACTGATGCTATTTGAGATACAAGGAAATGTATGTTGAAGGTTTTCACTGACTTTCTGTCTTGTTTATCTTAAATTCCACCTTGTAACTAGACCTTTAAGTTTATTGAACTTTCTGAGCCCTTTCTAATGTTATTTGAAATTTGGTTTAGCTTGTACTTATTCTACATTGAAACTGATGAAGTATGTCAGGTTTCTTTCAAGGAGGTGAGAGCTTGAGAGAGGCAATAGGAGTGTGATCTCCAATTTTCCTTAATGTTGGAGCTGCTCGATCTTTTAGATGTAGGATTGAACATAAGATGTTCAACATGGAATTTGAGGATGGATATAGGAGAAACATCATTTCATCGTTTTTGCCCAATAAAATGGCGAGTCATTGCACTCCTTTCTTTAGTTTGCCCCTCAACCACCAGAGTTTATGCATAACGTTCTATATCAAAGGAGAATCTTGAGACCTACATTGTAGGAGGAACGTCAGTGATGAGGAGGCAGTGGAATAGATCTTTATCTCTTGTATTTTGGGGGCTTCTTTGGACCCTAAACCAATTATCAGAAAGTGGATGCCTGAAGCTATGGGGATTTTCTGTTGTAAATCCTTTTATGATTTTTTGAGGCAAGATCCAAGTATTACACTGAATAAGATTGACTTGACTTGGAAGTTCGAGATCTCAAAGAAGTTTATTCTTTTGCCTTTATGGGACAGCATTTAGGAGAAGTTGTAGTGGCATTTGATCTTTGTTTTGGGCTACTAGTATTGATTATTATCTCGTTTACGTTCAGGTTGAACCATCAGTTTGCCCTCCCCTATGGTATACGTTTCCTTATTAGTACATCTTTAGCCTCAGAAGTGCAGAAGATCACTTGTTAACTTTTATTTTAAGGTCCGAATTTGTTGGAGGAGGTAATAGTTATATGTTGTCTTACTGGTCAAAAGTATCAATTTTGAGTTGAACTCTGTTAGGCCCCCCGAGTACCATTCCTTATGAAAGGAGGGATGAGAAATTAGTTAGAAGGTCAGGTGCATGGGAGCGAGGAACGACCTGAGGTTTGTTGTGAGAGAATGTCGTGGGGGTGGGGGTGGGGTGGGGGGGTTAGTATGATTATTTAGGTAAGAAGGGAGTTGTATTGTTTTCTTTTATGCTTCTGTCTATGAACAAGTTGTAGAAGAAGAGGAAAGATACCGGCCCTCTCTAATCGGCTGGGAGTTTTTGTATTGCCTTAGGGCATTGTTCCTCCTTTGTTTATTAATATTTCAGAAGGGAGGTACCTTACAAACTCCAGCCCCTGTAGTTCATAAGATCAATCTAGATGTGTTAGTGACAGGCAATTGTTTAACCCAGAAGATAAAAATATCTCGACAAAGTCAAACTCATTACTAATTTCAAAAAAAAAAAAAGTCAAACTCATTACTAAAGTAAATGACAGTAACTGATTGCTGCTTGTTTCAATCGCTTTCCTTTTTTTTTTTTTTTTCTTCTCTTAAGCATCATTATTTGCTCTCTATCTAATGTCAAACTTGTAGTCTAAAATGGCGAGTTGTGTTGTATTAAGCTTCTTTGGCATTTAGATACTATCGAGATAGTATTTCATTTTAAAAATGACTGTAATTTCTGAAGAACGATAATTCATTGTCCTGGCTATGTTTTGCTGCCACTCTTTGCGACCTGACCAGCAGTCGTGAAATCTAGGAACCCTTTTAAACTATAGGCCTTGTCTATGTTGCTACCATGAAATAAAATAGACCCTAAGCATGAGAAGATGATTGCATAATGTGGTTCTCATTCCATTTTTTTTTTCATTATGTTGCCGATCAGCTATACACTAAGGAAACTTCCAAGAATTGGAAGCTTGCTGGATCAGATGGAAGCAGCCAGCTAACGATCAAGGAACCGTCAGCAAATGTTGTCCTATTGGATTTCATATCATCTGAAAAATGGCACGACGTGGTGGATTTTGACGATCACCTCGACGACATTAGCAAGTATGATACACAATGCCCCCTCTTTTTGAATATTGCATCAATCATGGATATAGTTAAACCTTATTCTTTTAAACTTTGAAAACTTTCAGGGATTGGTTGAACCCAGACCTCTTCAAGTAG ATGGGCGGCGATCTACGCTTTGAGATCTCTCAGAATGCCTACATAAAGCTCGTTCTCCATGCCCTAAAGCACCGGACCTCCGCCGTCAACGGAGTCCTCCTAGGTCGTAACTCCGGCCCCAATGATGTCGTCGAAATTGCCGATTCCGTCCCTCTCTTCCACTCAAGCATCGGTCTCCTCCCTCAGCTCGAGATATCTCTCCTTCTGATTGAAGAATATTATGCGGCTAAGGGATTGAGTATCGTGGGATATTTTCATGCTAATGAGCGGTTTGATGACTATGAGGTCGGCGGTGTCGCCAAGAATATTGGTGATCATATCTCTCGATCATTTCCTCACGCTGCTCTTCTTTTGTTAGATCACAGAAAGCTTGAAGCTTTGCCAAAGAGAAAGGATAGGAGCCCTGTAATGGAGCTATACACTAAGGAAACTTCCAAGAATTGGAAGCTTGCTGGATCAGATGGAAGCAGCCAGCTAACGATCAAGGAACCGTCAGCAAATGTTGTCCTATTGGATTTCATATCATCTGAAAAATGGCACGACGTGGTGGATTTTGACGATCACCTCGACGACATTAGCAAGGATTGGTTGAACCCAGACCTCTTCAAGTAG ATGGGCGGCGATCTACGCTTTGAGATCTCTCAGAATGCCTACATAAAGCTCGTTCTCCATGCCCTAAAGCACCGGACCTCCGCCGTCAACGGAGTCCTCCTAGGTCGTAACTCCGGCCCCAATGATGTCGTCGAAATTGCCGATTCCGTCCCTCTCTTCCACTCAAGCATCGGTCTCCTCCCTCAGCTCGAGATATCTCTCCTTCTGATTGAAGAATATTATGCGGCTAAGGGATTGAGTATCGTGGGATATTTTCATGCTAATGAGCGGTTTGATGACTATGAGGTCGGCGGTGTCGCCAAGAATATTGGTGATCATATCTCTCGATCATTTCCTCACGCTGCTCTTCTTTTGTTAGATCACAGAAAGCTTGAAGCTTTGCCAAAGAGAAAGGATAGGAGCCCTGTAATGGAGCTATACACTAAGGAAACTTCCAAGAATTGGAAGCTTGCTGGATCAGATGGAAGCAGCCAGCTAACGATCAAGGAACCGTCAGCAAATGTTGTCCTATTGGATTTCATATCATCTGAAAAATGGCACGACGTGGTGGATTTTGACGATCACCTCGACGACATTAGCAAGGATTGGTTGAACCCAGACCTCTTCAAGTAG MGGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRNSGPNDVVEIADSVPLFHSSIGLLPQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNIGDHISRSFPHAALLLLDHRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLTIKEPSANVVLLDFISSEKWHDVVDFDDHLDDISKDWLNPDLFK Homology
BLAST of Lag0012076.1 vs. NCBI nr
Match: XP_008455761.1 (PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis melo] >KAA0025782.1 ER membrane protein complex subunit 8/9-like protein [Cucumis melo var. makuwa] >TYK09673.1 ER membrane protein complex subunit 8/9-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105 Identity = 195/203 (96.06%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of Lag0012076.1 vs. NCBI nr
Match: XP_038880935.1 (ER membrane protein complex subunit 8/9 homolog [Benincasa hispida]) HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105 Identity = 195/203 (96.06%), Postives = 198/203 (97.54%), Query Frame = 0
BLAST of Lag0012076.1 vs. NCBI nr
Match: XP_004144311.1 (ER membrane protein complex subunit 8/9 homolog [Cucumis sativus] >KGN54668.1 hypothetical protein Csa_012212 [Cucumis sativus]) HSP 1 Score: 391.7 bits (1005), Expect = 3.8e-105 Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of Lag0012076.1 vs. NCBI nr
Match: KAG6595444.1 (ER membrane protein complex subunit 8/9-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027444.1 ER membrane protein complex subunit 8/9-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 387.5 bits (994), Expect = 7.1e-104 Identity = 192/203 (94.58%), Postives = 198/203 (97.54%), Query Frame = 0
BLAST of Lag0012076.1 vs. NCBI nr
Match: XP_023518172.1 (ER membrane protein complex subunit 8/9 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103 Identity = 192/203 (94.58%), Postives = 198/203 (97.54%), Query Frame = 0
BLAST of Lag0012076.1 vs. ExPASy Swiss-Prot
Match: Q9FG71 (ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana OX=3702 GN=EMB2731 PE=2 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 2.8e-79 Identity = 144/201 (71.64%), Postives = 176/201 (87.56%), Query Frame = 0
BLAST of Lag0012076.1 vs. ExPASy Swiss-Prot
Match: Q9DB76 (ER membrane protein complex subunit 9 OS=Mus musculus OX=10090 GN=Emc9 PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.9e-23 Identity = 67/194 (34.54%), Postives = 103/194 (53.09%), Query Frame = 0
BLAST of Lag0012076.1 vs. ExPASy Swiss-Prot
Match: Q5FVL2 (ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 8.3e-23 Identity = 63/204 (30.88%), Postives = 100/204 (49.02%), Query Frame = 0
BLAST of Lag0012076.1 vs. ExPASy Swiss-Prot
Match: O70378 (ER membrane protein complex subunit 8 OS=Mus musculus OX=10090 GN=Emc8 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-22 Identity = 63/204 (30.88%), Postives = 99/204 (48.53%), Query Frame = 0
BLAST of Lag0012076.1 vs. ExPASy Swiss-Prot
Match: Q5U1W7 (ER membrane protein complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Emc9 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.1e-22 Identity = 65/194 (33.51%), Postives = 102/194 (52.58%), Query Frame = 0
BLAST of Lag0012076.1 vs. ExPASy TrEMBL
Match: A0A5A7SKW9 (ER membrane protein complex subunit 8/9-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00760 PE=3 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105 Identity = 195/203 (96.06%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of Lag0012076.1 vs. ExPASy TrEMBL
Match: A0A1S3C2C1 (ER membrane protein complex subunit 8/9 homolog OS=Cucumis melo OX=3656 GN=LOC103495860 PE=3 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105 Identity = 195/203 (96.06%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of Lag0012076.1 vs. ExPASy TrEMBL
Match: A0A0A0KYR9 (MPN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G419600 PE=3 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105 Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of Lag0012076.1 vs. ExPASy TrEMBL
Match: A0A6J1HRP6 (ER membrane protein complex subunit 8/9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466107 PE=3 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 7.7e-104 Identity = 192/203 (94.58%), Postives = 198/203 (97.54%), Query Frame = 0
BLAST of Lag0012076.1 vs. ExPASy TrEMBL
Match: A0A6J1GG75 (ER membrane protein complex subunit 8/9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111453869 PE=3 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.0e-103 Identity = 190/203 (93.60%), Postives = 197/203 (97.04%), Query Frame = 0
BLAST of Lag0012076.1 vs. TAIR 10
Match: AT5G55940.1 (Uncharacterised protein family (UPF0172) ) HSP 1 Score: 296.2 bits (757), Expect = 2.0e-80 Identity = 144/201 (71.64%), Postives = 176/201 (87.56%), Query Frame = 0
BLAST of Lag0012076.1 vs. TAIR 10
Match: AT5G51620.3 (Uncharacterised protein family (UPF0172) ) HSP 1 Score: 84.0 bits (206), Expect = 1.6e-16 Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 0
BLAST of Lag0012076.1 vs. TAIR 10
Match: AT5G51620.2 (Uncharacterised protein family (UPF0172) ) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10 Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0
BLAST of Lag0012076.1 vs. TAIR 10
Match: AT5G51620.1 (Uncharacterised protein family (UPF0172) ) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10 Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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