Lag0011850.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTGCGTTTGGGTTTTCGTAATTGCTTTGGTGTTGATAGTGTTGGTAGTAAAGGCGACCTTGCTATATTGTGGTTTGAAGAAGTTACCTTTGCCTTGAATTCATACTCTTGTTATCATATCGATGGTTGGGTCAATTGGCAGGATAAACAATGGCGCGTGACCGGGTTCTATGGTTCCCCTTACGCAGAACTTCAGTCTAATTCGTGGAATATCCTCCGACATCTCCAGGGTAGTGCTTCTGTTCCCTGGGTTGTTGGGGGTGACTTTAATGCCCTTATGTATCACTCTGATAAGGAGGGGGGTCGCCCATGTGTTGATAGTGATCTTCAGATTTTCCATTTTGTCTTAGACGACTTGGCGTTAGTGGATTTGGGTTTCCGGGGGCCCCGTTTCGCTTGGTGTAACCGTCAGCCGGGTTGA ATGAAGTTGCGTTTGGGTTTTCGTAATTGCTTTGGTGTTGATAGTGTTGGTAGTAAAGGCGACCTTGCTATATTGTGGTTTGAAGAAGTTACCTTTGCCTTGAATTCATACTCTTGTTATCATATCGATGGTTGGGTCAATTGGCAGGATAAACAATGGCGCGTGACCGGGTTCTATGGTTCCCCTTACGCAGAACTTCAGTCTAATTCGTGGAATATCCTCCGACATCTCCAGGGTAGTGCTTCTGTTCCCTGGGTTGTTGGGGGTGACTTTAATGCCCTTATGTATCACTCTGATAAGGAGGGGGGTCGCCCATGTGTTGATAGTGATCTTCAGATTTTCCATTTTGTCTTAGACGACTTGGCGTTAGTGGATTTGGGTTTCCGGGGGCCCCGTTTCGCTTGGTGTAACCGTCAGCCGGGTTGA ATGAAGTTGCGTTTGGGTTTTCGTAATTGCTTTGGTGTTGATAGTGTTGGTAGTAAAGGCGACCTTGCTATATTGTGGTTTGAAGAAGTTACCTTTGCCTTGAATTCATACTCTTGTTATCATATCGATGGTTGGGTCAATTGGCAGGATAAACAATGGCGCGTGACCGGGTTCTATGGTTCCCCTTACGCAGAACTTCAGTCTAATTCGTGGAATATCCTCCGACATCTCCAGGGTAGTGCTTCTGTTCCCTGGGTTGTTGGGGGTGACTTTAATGCCCTTATGTATCACTCTGATAAGGAGGGGGGTCGCCCATGTGTTGATAGTGATCTTCAGATTTTCCATTTTGTCTTAGACGACTTGGCGTTAGTGGATTTGGGTTTCCGGGGGCCCCGTTTCGCTTGGTGTAACCGTCAGCCGGGTTGA MKLRLGFRNCFGVDSVGSKGDLAILWFEEVTFALNSYSCYHIDGWVNWQDKQWRVTGFYGSPYAELQSNSWNILRHLQGSASVPWVVGGDFNALMYHSDKEGGRPCVDSDLQIFHFVLDDLALVDLGFRGPRFAWCNRQPG Homology
BLAST of Lag0011850.1 vs. NCBI nr
Match: KAF5449841.1 (hypothetical protein F2P56_030246 [Juglans regia]) HSP 1 Score: 153.7 bits (387), Expect = 1.2e-33 Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 0
BLAST of Lag0011850.1 vs. NCBI nr
Match: XP_041001573.1 (uncharacterized protein LOC121247264 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 145.2 bits (365), Expect = 4.3e-31 Identity = 61/141 (43.26%), Postives = 90/141 (63.83%), Query Frame = 0
BLAST of Lag0011850.1 vs. NCBI nr
Match: XP_042988712.1 (uncharacterized protein LOC122316247 [Carya illinoinensis]) HSP 1 Score: 142.9 bits (359), Expect = 2.1e-30 Identity = 63/141 (44.68%), Postives = 87/141 (61.70%), Query Frame = 0
BLAST of Lag0011850.1 vs. NCBI nr
Match: KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia]) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29 Identity = 60/141 (42.55%), Postives = 88/141 (62.41%), Query Frame = 0
BLAST of Lag0011850.1 vs. NCBI nr
Match: XP_042972796.1 (uncharacterized protein LOC122304603 [Carya illinoinensis]) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29 Identity = 58/141 (41.13%), Postives = 92/141 (65.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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