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IVF0025672.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTAGGTGATGAAAATTTCGCTCGCATTTGCTACACCGAAGTGCAGCAACAAAAGCGATTTCGGACGGAAACTTGGAATTTTCTGATTCTTCTACGGTTGGCTTCCGATTATCTCCACTAATGGAGCACGGAGATACCAATAACGATGTTCACGTTACTGTTCAAAGTTCTTCACCACCACCACTGCCGCCGCTGGAGAAGCAGGAACTACAACAACTGGCAGAACCACTGCCGAAATCATTCCAAGAAGATGAACAAGATGAAGAGCTACGTAAACTTCTGACTCCCGATGTTAGGGATCTTCCGCTCGTTCCTCCCTCCGCCGTCGAGACCAATTTCGTCTCGTATTTCGCTCCCGGTGCGTTAACTGTCGCCATATCCTTTACAAATTCGTAGTGGAGGTTTTAGTGCTATAATTAAACCCTAAACCCTCTGCTTATTCTTAATAATTGGTCATCTCATTTCCAGATTTTATCAAGGAAGGTCATGATCAGTACGTTTACCGCCACGCCAACGGGTAACGATTTTGATATCTCTTTTAGTTTTATCCGACGAACAATTTCCCGCTCATCGAATTTACTATTTTGCCTTGTTTTTCTTATTCTAGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTTAAAGACGGTGGCGGGGTCACGGCCGTTGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGAAAACGCAAGAAGGTATAGAAATGGTAATTGCAGACCTGCGAACTGTTTCTCGTTATTGGTGATTAAGTGATGTTTGAGAGTTTAAAACCAGTCTAAAACTCGCTTTTAATTTCTAAAAACTAATTGATATTTGATTTTATATCATTTTCGTATCATTAAGTTGGAATGATTAAAAATATATTTTGGAATGATTTTGAAAATGACATAAGTGATTTTAGTCCAAGAATCGCTCGCAAACATGTCTCCTAGAAACTAAGTTAACCAATGTATATACGTTGTGGTATAACCTTACTTACTGTTATGGTGCTGATTGGCTTTGTGTGAGTTATGTTGCCTTGGATTTTATGAAACGAAATTATTGTCACTAGATAGAAGATTATGTCAATTTTCTGAACAATTATTTATGAATTATATCTAATTCACCATTTCATAGACAATATCGAAGGACACAATCGCACAACTCATAAAGCAGATCTTGTTCTACTAAGGTTGTATAGATGATACATGTTTCAGAACCCGCCTTGGCTTGTGGAGTTCTTTTGTCATAATGGAGGTTTATTTCTCTTGTAGAAATTTTGGTGTACCATAAGAAATGGCTTGCGGATGTTTTACATTATATGATATGCAACATTATAAAAATTCCTTTTTACAGTTTCTTACATCTTCAACTTCTAATTTTAACTACTGTCTTGTTTGTTAATCTGAATACTTGGATTTTATTTTCTGTGCTGAAGTCACTAGTATTCTATTGTAGAATGCACAATTCTTTGAGCCCAATTCTGCTCTATGTAAAGTCTACACCAAAGATGCTTCTTATATTGTGAGGTTGAATCTTTTTGCTTTTCATTCACCTATTTCTGATAACAACATATGTCCATCAGCTTCTCTTCAATTGCAAGTGCAACTCAGATTTTTTATGCTATTGTTAGGTGTTCTGTTAAAGGTTCTCTATTGGAAGTAAATGATCGATTAATAAAGCAGCCAGAGTTGCTCAACACTGTGGTGAGTCCAACCTTTTAATTCAGTGGCCGTTTGCGGGTTGATATATTGATTGCTTTTACTGTAGTGAAAGTGTGGTTGTTCTACATTCCTATGAGCATGCTACATTACTAATATTTGTTTTAAAGATTTTTAAAAACTACATATGGAAGATAATTCTGATGTAGTAATAGATTGCCTGAATGAAATTTTACTAATGTCACTTGTCTATAATGTGTGCATAGATCAGTTCAGTTGTTAGGCTTTTCCTTTTTATTGCACTAACACAGGCACAAAAAGCAATTACTATTGACATTTCTAACTAATGCTCAAATGGCAAGTTCCCCAAGAACTTTTGGAGGGAGATTGATGTTCTATTTGCTGTTTTCACGATGAGTATATAATATGAAAATGAAATTATATCAATGCAAATTAGAAGGGGAAAAAAAGCATATCCTTTCTTTGTAACCTCATGCTATAACAACAAGATTGAGTCAATCATCAATAGTGTTCATTTTCAATTCACATACTTCAAATGGGAAAATATAAAAACAAGATTCTGACTTGACTATTTATATTATTACAGCCTCACAGAGAAGGGTACATTGCTATTGTTATGCCAAAAGCAGCAGACTGGTTGAAAGTCAAGGAGTCATTGCTGAGCCTTGAAGAATACAAAAGATTGAGAGAGCTCAACTAAATCATTCTTCCGCTGACAGAAACCAAGTAATTTTTAGATTTCTTCCATTGATGCTTCCTCAATCTGTTTTTTAACCTGCCAGGTTTATCTCGCAGCATAGTTTAACCGAATGCCTGAGTGATAATAATTCACTTAGTTCTTGTAAGTTTGAGAACATACACACACACACTTACCTTGCCTGGCATTTTGTGATTTATTAGAAGTTTCTGAGTATAGAAGTCTAATATTAGTTCGAACTTTCAGTCCTTGTGTCTTCCAGTTTTGATAGTTTAACTTTACAAAAAGTCTTTGGTCCTTGCCACTTAATTTCAGCACTTCACTTAGAAAAGTCTCATGGTGACATCGTTATCAATTTATCGTCATCATCATGTAACATTTGTTAAGAGAGGTGCCAATCTGGGAAGTAACCAATGACACCATCCACGCCCAAAATCCCCTATTTGGGAGTGTTTTCAAGTCGCATCTTTATTTTACAAGAACTTCGGG CTTTAGGTGATGAAAATTTCGCTCGCATTTGCTACACCGAAGTGCAGCAACAAAAGCGATTTCGGACGGAAACTTGGAATTTTCTGATTCTTCTACGGTTGGCTTCCGATTATCTCCACTAATGGAGCACGGAGATACCAATAACGATGTTCACGTTACTGTTCAAAGTTCTTCACCACCACCACTGCCGCCGCTGGAGAAGCAGGAACTACAACAACTGGCAGAACCACTGCCGAAATCATTCCAAGAAGATGAACAAGATGAAGAGCTACGTAAACTTCTGACTCCCGATGTTAGGGATCTTCCGCTCGTTCCTCCCTCCGCCGTCGAGACCAATTTCGTCTCGTATTTCGCTCCCGATTTTATCAAGGAAGGTCATGATCAGTACGTTTACCGCCACGCCAACGGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTTAAAGACGGTGGCGGGGTCACGGCCGTTGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGAAAACGCAAGAAGAATGCACAATTCTTTGAGCCCAATTCTGCTCTATGTAAAGTCTACACCAAAGATGCTTCTTATATTGTGAGGTGTTCTGTTAAAGGTTCTCTATTGGAAGTAAATGATCGATTAATAAAGCAGCCAGAGTTGCTCAACACTGTGCCTCACAGAGAAGGGTACATTGCTATTGTTATGCCAAAAGCAGCAGACTGGTTGAAAGTCAAGGAGTCATTGCTGAGCCTTGAAGAATACAAAAGATTGAGAGAGCTCAACTAAATCATTCTTCCGCTGACAGAAACCAAGTAATTTTTAGATTTCTTCCATTGATGCTTCCTCAATCTGTTTTTTAACCTGCCAGGTTTATCTCGCAGCATAGTTTAACCGAATGCCTGAGTGATAATAATTCACTTAGTTCTTGTAAGTTTGAGAACATACACACACACACTTACCTTGCCTGGCATTTTGTGATTTATTAGAAGTTTCTGAGTATAGAAGTCTAATATTAGTTCGAACTTTCAGTCCTTGTGTCTTCCAGTTTTGATAGTTTAACTTTACAAAAAGTCTTTGGTCCTTGCCACTTAATTTCAGCACTTCACTTAGAAAAGTCTCATGGTGACATCGTTATCAATTTATCGTCATCATCATGTAACATTTGTTAAGAGAGGTGCCAATCTGGGAAGTAACCAATGACACCATCCACGCCCAAAATCCCCTATTTGGGAGTGTTTTCAAGTCGCATCTTTATTTTACAAGAACTTCGGG ATGGAGCACGGAGATACCAATAACGATGTTCACGTTACTGTTCAAAGTTCTTCACCACCACCACTGCCGCCGCTGGAGAAGCAGGAACTACAACAACTGGCAGAACCACTGCCGAAATCATTCCAAGAAGATGAACAAGATGAAGAGCTACGTAAACTTCTGACTCCCGATGTTAGGGATCTTCCGCTCGTTCCTCCCTCCGCCGTCGAGACCAATTTCGTCTCGTATTTCGCTCCCGATTTTATCAAGGAAGGTCATGATCAGTACGTTTACCGCCACGCCAACGGCTTGTGTGTGATCGGCTTGGCTGCTACGCATATTGCATTTAAAGACGGTGGCGGGGTCACGGCCGTTGATTTCAATGTAGGGAAATCCGATCGCAGCAGCTTTAAAGTCACTGGAAAACGCAAGAAGAATGCACAATTCTTTGAGCCCAATTCTGCTCTATGTAAAGTCTACACCAAAGATGCTTCTTATATTGTGAGGTGTTCTGTTAAAGGTTCTCTATTGGAAGTAAATGATCGATTAATAAAGCAGCCAGAGTTGCTCAACACTGTGCCTCACAGAGAAGGGTACATTGCTATTGTTATGCCAAAAGCAGCAGACTGGTTGAAAGTCAAGGAGTCATTGCTGAGCCTTGAAGAATACAAAAGATTGAGAGAGCTCAACTAA MEHGDTNNDVHVTVQSSSPPPLPPLEKQELQQLAEPLPKSFQEDEQDEELRKLLTPDVRDLPLVPPSAVETNFVSYFAPDFIKEGHDQYVYRHANGLCVIGLAATHIAFKDGGGVTAVDFNVGKSDRSSFKVTGKRKKNAQFFEPNSALCKVYTKDASYIVRCSVKGSLLEVNDRLIKQPELLNTVPHREGYIAIVMPKAADWLKVKESLLSLEEYKRLRELN Homology
BLAST of IVF0025672.1 vs. ExPASy Swiss-Prot
Match: Q80ZQ9 (Protein Abitram OS=Mus musculus OX=10090 GN=Abitram PE=1 SV=2) HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22 Identity = 65/182 (35.71%), Postives = 99/182 (54.40%), Query Frame = 0
BLAST of IVF0025672.1 vs. ExPASy Swiss-Prot
Match: Q9NX38 (Protein Abitram OS=Homo sapiens OX=9606 GN=ABITRAM PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.9e-21 Identity = 55/159 (34.59%), Postives = 90/159 (56.60%), Query Frame = 0
BLAST of IVF0025672.1 vs. ExPASy Swiss-Prot
Match: Q5RFS0 (Protein Abitram OS=Pongo abelii OX=9601 GN=ABITRAM PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.9e-21 Identity = 55/159 (34.59%), Postives = 90/159 (56.60%), Query Frame = 0
BLAST of IVF0025672.1 vs. ExPASy Swiss-Prot
Match: Q29S16 (Protein Abitram OS=Bos taurus OX=9913 GN=ABITRAM PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 8.6e-21 Identity = 61/173 (35.26%), Postives = 94/173 (54.34%), Query Frame = 0
BLAST of IVF0025672.1 vs. ExPASy Swiss-Prot
Match: Q28G67 (Protein Abitram OS=Xenopus tropicalis OX=8364 GN=abitram PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 8.6e-21 Identity = 54/157 (34.39%), Postives = 89/157 (56.69%), Query Frame = 0
BLAST of IVF0025672.1 vs. ExPASy TrEMBL
Match: A0A1S4E5T9 (Actin-binding transcription modulator OS=Cucumis melo OX=3656 GN=LOC103503860 PE=3 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 2.6e-121 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of IVF0025672.1 vs. ExPASy TrEMBL
Match: A0A5D3E6L9 (Actin-binding transcription modulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007830 PE=3 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 2.6e-121 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of IVF0025672.1 vs. ExPASy TrEMBL
Match: A0A5A7VCI3 (Actin-binding transcription modulator OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001340 PE=3 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 2.9e-120 Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of IVF0025672.1 vs. ExPASy TrEMBL
Match: A0A0A0LDM0 (Actin-binding transcription modulator OS=Cucumis sativus OX=3659 GN=Csa_3G874330 PE=3 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 9.0e-114 Identity = 209/223 (93.72%), Postives = 216/223 (96.86%), Query Frame = 0
BLAST of IVF0025672.1 vs. ExPASy TrEMBL
Match: A0A6J1CMG0 (Actin-binding transcription modulator OS=Momordica charantia OX=3673 GN=LOC111012618 PE=3 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 2.0e-97 Identity = 187/222 (84.23%), Postives = 203/222 (91.44%), Query Frame = 0
BLAST of IVF0025672.1 vs. NCBI nr
Match: XP_008466465.1 (PREDICTED: protein Simiate [Cucumis melo] >XP_016903582.1 PREDICTED: protein Simiate [Cucumis melo] >TYK31468.1 protein Simiate [Cucumis melo var. makuwa]) HSP 1 Score: 441 bits (1135), Expect = 3.65e-156 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of IVF0025672.1 vs. NCBI nr
Match: KAA0063309.1 (protein Simiate [Cucumis melo var. makuwa]) HSP 1 Score: 438 bits (1126), Expect = 8.61e-155 Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of IVF0025672.1 vs. NCBI nr
Match: XP_004136372.1 (protein Abitram [Cucumis sativus] >KGN60055.1 hypothetical protein Csa_001950 [Cucumis sativus]) HSP 1 Score: 416 bits (1070), Expect = 2.97e-146 Identity = 209/223 (93.72%), Postives = 216/223 (96.86%), Query Frame = 0
BLAST of IVF0025672.1 vs. NCBI nr
Match: XP_038896120.1 (protein Abitram [Benincasa hispida] >XP_038896121.1 protein Abitram [Benincasa hispida] >XP_038896122.1 protein Abitram [Benincasa hispida]) HSP 1 Score: 406 bits (1043), Expect = 3.61e-142 Identity = 208/223 (93.27%), Postives = 213/223 (95.52%), Query Frame = 0
BLAST of IVF0025672.1 vs. NCBI nr
Match: XP_022142526.1 (protein Simiate [Momordica charantia]) HSP 1 Score: 362 bits (929), Expect = 8.20e-125 Identity = 187/222 (84.23%), Postives = 203/222 (91.44%), Query Frame = 0
BLAST of IVF0025672.1 vs. TAIR 10
Match: AT1G75980.1 (Single hybrid motif superfamily protein ) HSP 1 Score: 263.8 bits (673), Expect = 1.2e-70 Identity = 136/218 (62.39%), Postives = 167/218 (76.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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